Q9BVI0
Gene name |
PHF20 (C20orf104, GLEA2, HCA58, NZF, TZP) |
Protein name |
PHD finger protein 20 |
Names |
Glioma-expressed antigen 2, Hepatocellular carcinoma-associated antigen 58, Novel zinc finger protein, Transcription factor TZP |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:51230 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
8 structures for Q9BVI0
642 variants for Q9BVI0
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs200722349 CA314163755 |
4 | H>Q | No |
ClinGen 1000Genomes TOPMed |
|
| TCGA novel | 6 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9838026 rs778378425 |
7 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA314163757 rs989066814 |
9 | R>* | No |
ClinGen Ensembl |
|
|
CA408771132 rs1302616679 |
13 | F>L | No |
ClinGen gnomAD |
|
|
rs1454947466 CA408771151 |
14 | E>Q | No |
ClinGen gnomAD |
|
|
CA314163768 rs892332128 |
15 | V>A | No |
ClinGen TOPMed |
|
|
rs771532032 CA9838028 |
15 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1569126031 CA408771200 |
16 | G>A | No |
ClinGen Ensembl |
|
|
CA408771188 rs1316783410 |
16 | G>R | No |
ClinGen TOPMed |
|
|
rs779413542 CA9838029 |
17 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408771295 rs1309161447 |
22 | R>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 22 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs746538790 CA9838030 |
24 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9838031 rs768125992 |
24 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1190138458 CA408785407 |
29 | Y>H | No |
ClinGen gnomAD |
|
|
CA408785426 rs1205100712 |
30 | P>L | No |
ClinGen TOPMed |
|
|
rs1249915230 CA408785424 |
30 | P>S | No |
ClinGen TOPMed |
|
|
CA314148586 rs375907176 |
32 | H>D | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA408785446 rs375907176 |
32 | H>Y | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs754308147 CA9838047 |
33 | I>V | No |
ClinGen ExAC |
|
|
rs1568638920 CA408785494 |
35 | D>A | No |
ClinGen Ensembl |
|
|
rs999737782 CA314148604 |
36 | I>T | No |
ClinGen Ensembl |
|
|
rs377513726 CA9838048 |
38 | Y>H | No |
ClinGen ESP ExAC gnomAD |
|
|
CA9838050 rs200171650 |
39 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA9838051 rs768233756 CA314148646 |
43 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780728312 CA9838052 |
45 | I>V | No |
ClinGen ExAC |
|
|
rs759370751 CA314148657 |
49 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs769504764 CA9838054 |
50 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307138088 CA408785751 |
53 | R>C | No |
ClinGen TOPMed |
|
|
rs772978047 CA9838055 |
53 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
CA408785777 rs1435073788 |
54 | Y>F | No |
ClinGen TOPMed |
|
| TCGA novel | 63 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9838056 rs762820870 |
64 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA408786130 rs1349635784 |
65 | L>V | No |
ClinGen gnomAD |
|
|
CA408786165 TCGA novel rs1600812887 |
66 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Ensembl |
|
rs1377256693 CA408786177 |
66 | R>L | No |
ClinGen TOPMed |
|
|
rs774380857 CA9838058 |
76 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA408786475 rs1447280036 |
78 | L>F | No |
ClinGen gnomAD |
|
|
rs1221089218 CA408786479 |
79 | H>N | No |
ClinGen gnomAD |
|
|
CA408786493 rs1266211382 |
79 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA9838059 rs759488061 |
83 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370096927 CA9838060 |
84 | S>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs945682918 CA314148692 |
85 | S>F | No |
ClinGen TOPMed |
|
|
CA408787645 rs1323521788 |
86 | E>D | No |
ClinGen gnomAD |
|
|
rs752137046 CA9838100 |
101 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9838101 rs755656443 |
101 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs748952706 CA9838103 |
104 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408788086 rs1600819524 |
106 | K>E | No |
ClinGen Ensembl |
|
|
CA9838104 rs756903137 |
106 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9838105 rs201184692 |
107 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201184692 CA9838106 |
107 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs772065808 CA9838107 |
108 | T>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 113 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs750076672 CA9838145 |
117 | T>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 121 | Y>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA408789819 rs1191851864 |
126 | Q>H | No |
ClinGen gnomAD |
|
|
CA9838146 rs200515202 |
129 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1205801592 COSM1220363 CA408789880 |
130 | H>R | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs371342493 CA314160712 |
131 | I>T | No |
ClinGen ESP gnomAD |
|
|
CA408789917 rs1184321392 |
132 | H>R | No |
ClinGen gnomAD |
|
| TCGA novel | 135 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA408789970 rs1478460238 |
138 | K>R | No |
ClinGen gnomAD |
|
|
CA9838149 rs200034859 |
139 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200034859 CA314160726 |
139 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9838164 rs766144678 |
141 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408791314 rs1465523906 |
147 | R>S | No |
ClinGen TOPMed |
|
|
CA408791358 rs1481591229 |
153 | H>Q | No |
ClinGen gnomAD |
|
|
rs1173595802 CA408791368 |
155 | S>G | No |
ClinGen gnomAD |
|
| TCGA novel | 155 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs866166341 CA314163744 |
155 | S>N | No |
ClinGen Ensembl |
|
|
rs6119662 CA314163751 |
160 | P>L | No |
ClinGen gnomAD |
|
| TCGA novel | 161 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA408791421 rs370884660 |
163 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9838165 rs370884660 |
163 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA408791423 rs1399226340 |
163 | R>Q | No |
ClinGen gnomAD |
|
|
rs1161582192 CA408791453 |
167 | K>I | No |
ClinGen gnomAD |
|
|
CA9838166 rs754763215 |
169 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9838168 rs752558724 |
172 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA9838167 rs767442172 |
172 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA9838171 rs373974765 |
176 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201258218 CA9838173 |
181 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9838174 rs746179704 |
182 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs544071911 CA9838175 |
183 | K>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9838177 rs747465598 |
184 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA314163853 rs747465598 |
184 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs377563371 CA9838181 |
186 | K>E | No |
ClinGen ESP ExAC TOPMed |
|
|
rs774172000 CA408791617 |
191 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9838182 rs774172000 |
191 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 191 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs931628551 CA314163878 |
193 | Q>H | No |
ClinGen Ensembl |
|
|
rs6119663 CA314163882 |
194 | P>L | No |
ClinGen Ensembl |
|
|
CA408791645 rs1201220840 |
195 | D>E | No |
ClinGen TOPMed |
|
|
rs752606610 CA9838185 |
198 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA314163890 rs376078467 |
198 | G>R | No |
ClinGen gnomAD |
|
|
rs755997270 CA9838186 |
199 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA314163893 rs974686146 |
201 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA408791691 rs1324156172 |
202 | C>S | No |
ClinGen gnomAD |
|
|
CA408791690 rs1324156172 |
202 | C>Y | No |
ClinGen gnomAD |
|
|
rs1376020156 CA408791710 |
203 | S>C | No |
ClinGen TOPMed |
|
| TCGA novel | 204 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA408791746 rs1287810590 |
205 | K>N | No |
ClinGen gnomAD |
|
|
CA9838187 rs764036456 |
208 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1307439570 CA408791787 |
208 | V>L | No |
ClinGen TOPMed |
|
|
CA9838189 rs757347871 |
211 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs921858026 CA314163917 |
212 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA314163922 rs201409614 |
213 | L>P | No |
ClinGen 1000Genomes |
|
|
rs1289017498 CA408791894 |
214 | P>R | No |
ClinGen gnomAD |
|
|
rs779012148 CA9838190 |
215 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs747414056 CA9838194 |
221 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1464582012 CA408792040 |
221 | K>N | No |
ClinGen TOPMed |
|
|
rs1358851272 CA408792102 |
225 | S>A | No |
ClinGen TOPMed |
|
|
rs185182541 CA9838197 |
226 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1402628450 CA408792143 |
227 | N>S | No |
ClinGen TOPMed |
|
|
rs770545172 CA9838198 |
229 | R>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 230 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 230 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA314163953 rs1048888503 |
231 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs907583626 CA314163958 |
232 | S>A | No |
ClinGen TOPMed |
|
|
CA314163964 rs1004721328 |
234 | D>N | No |
ClinGen Ensembl |
|
|
CA314163969 rs1014731601 |
235 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
CA408792333 rs1312502087 |
238 | D>N | No |
ClinGen gnomAD |
|
|
rs1260756330 CA408792358 |
239 | K>T | No |
ClinGen TOPMed |
|
|
rs6119664 CA314163976 |
241 | P>L | No |
ClinGen Ensembl |
|
|
CA9838200 rs759109502 |
241 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA9838201 rs767262328 |
242 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA314164006 CA9838202 rs775094069 |
243 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1338086929 CA408792437 |
243 | N>Y | No |
ClinGen gnomAD |
|
|
CA9838203 rs373676967 |
244 | D>G | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
COSM1751422 CA9838204 rs763967095 |
247 | K>N | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
| TCGA novel | 248 | S>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761776074 CA9838207 |
251 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs750572738 CA9838209 |
251 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs761776074 CA9838206 |
251 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA9838210 CA408792679 rs758491078 |
252 | N>K | No |
ClinGen ExAC TOPMed |
|
|
rs781724302 CA9838214 |
255 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408792767 rs1394749451 |
256 | P>L | No |
ClinGen TOPMed |
|
|
CA408792765 rs1394749451 |
256 | P>R | No |
ClinGen TOPMed |
|
|
CA9838216 rs770492032 |
258 | R>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 260 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9838218 rs745400759 |
266 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1325179500 CA408792996 |
267 | A>V | No |
ClinGen gnomAD |
|
|
rs1568669980 CA408793006 |
268 | P>S | No |
ClinGen Ensembl |
|
|
CA9838219 rs771562037 |
269 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA408793751 rs1238548896 |
270 | A>G | No |
ClinGen gnomAD |
|
|
rs1383940548 CA408793762 |
272 | D>G | No |
ClinGen TOPMed |
|
|
rs1355871448 CA408793785 |
275 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1490176795 CA408793819 |
280 | P>L | No |
ClinGen gnomAD |
|
|
rs140150934 CA9838240 |
280 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA314166926 rs1038516584 |
281 | I>V | No |
ClinGen TOPMed |
|
|
CA314166930 rs753355315 |
282 | T>R | No |
ClinGen Ensembl |
|
|
rs746657834 CA9838243 |
286 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA9838244 rs768353392 |
287 | R>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 291 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs370434795 CA408793908 |
294 | C>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9838247 rs769679425 |
294 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370434795 CA9838246 |
294 | C>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 295 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA408793929 rs1456887132 RCV000736218 |
297 | P>L | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs773224660 CA9838248 |
297 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762848107 CA9838250 COSM1565814 |
300 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs191991335 CA9838251 |
300 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1379479411 COSM78298 CA408793956 |
302 | R>Q | ovary [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA9838252 rs774363401 |
302 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408793978 rs1357394966 |
305 | K>R | No |
ClinGen gnomAD |
|
|
CA408793996 rs1165922288 |
308 | S>P | No |
ClinGen gnomAD |
|
|
CA408794183 rs1359507912 |
309 | Q>H | No |
ClinGen TOPMed |
|
|
rs1316762773 CA408794242 |
314 | N>S | No |
ClinGen TOPMed |
|
|
rs1458945046 CA408794267 |
316 | S>L | No |
ClinGen gnomAD |
|
|
CA408794268 rs1458945046 |
316 | S>W | No |
ClinGen gnomAD |
|
|
CA9838269 rs749245720 |
324 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1313093715 CA408794358 |
324 | S>P | No |
ClinGen gnomAD |
|
|
rs368610578 CA9838270 |
327 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA408794393 rs1183160549 |
327 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA9838271 rs774518065 |
329 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA408794418 rs1428492770 |
330 | R>K | No |
ClinGen gnomAD |
|
|
rs1169189569 CA408794428 |
331 | L>V | No |
ClinGen gnomAD |
|
|
CA408794440 rs1426176826 |
332 | S>F | No |
ClinGen gnomAD |
|
|
CA408794447 rs1431843142 |
333 | T>A | No |
ClinGen TOPMed |
|
|
CA9838273 rs545669876 |
334 | N>I | No |
ClinGen 1000Genomes ExAC |
|
|
CA314167603 rs1048745073 |
335 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs142799301 CA9838274 |
337 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 338 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA408794515 rs1379781480 |
339 | I>M | No |
ClinGen gnomAD |
|
|
rs761014867 CA9838275 |
346 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1319662069 CA408794636 |
350 | V>A | No |
ClinGen gnomAD |
|
|
CA408794643 rs1277469074 |
351 | D>V | No |
ClinGen gnomAD |
|
|
CA408794642 rs1219068404 |
351 | D>Y | No |
ClinGen gnomAD |
|
|
rs368676517 CA9838277 |
352 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA408794656 rs368676517 |
352 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1485276210 CA408794666 |
353 | D>G | No |
ClinGen gnomAD |
|
|
CA408794662 rs1237502600 |
353 | D>H | No |
ClinGen gnomAD |
|
|
CA9838279 rs765665159 |
356 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA314167626 rs1004122337 |
356 | Q>K | No |
ClinGen TOPMed |
|
|
CA408794711 rs1476248895 |
357 | D>V | No |
ClinGen TOPMed |
|
|
rs151029211 CA9838280 COSM1411472 |
358 | T>M | large_intestine Variant assessed as Somatic; 0.0002776 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA9838282 rs780730285 |
361 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs747769162 CA9838283 |
362 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1293303719 CA408794745 |
363 | K>E | No |
ClinGen TOPMed |
|
| TCGA novel | 364 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA408794774 rs1344648379 |
367 | E>K | No |
ClinGen gnomAD |
|
|
rs755790566 CA9838284 |
368 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1438365742 CA408794797 |
368 | G>V | No |
ClinGen gnomAD |
|
|
CA9838295 rs762108010 |
370 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs999547381 CA314167878 |
371 | K>M | No |
ClinGen TOPMed gnomAD |
|
|
CA408794820 rs1237285050 |
372 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
CA408794829 rs1407985737 |
373 | A>G | No |
ClinGen TOPMed |
|
|
rs765736054 CA9838296 |
374 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs1600854124 CA408794839 |
375 | E>* | No |
ClinGen Ensembl |
|
|
CA408794838 rs1600854124 |
375 | E>Q | No |
ClinGen Ensembl |
|
|
rs750898682 CA9838297 |
379 | V>F | No |
ClinGen ExAC gnomAD |
|
|
rs763499521 CA9838298 |
380 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs1424931557 CA408794876 |
381 | S>P | No |
ClinGen gnomAD |
|
|
rs940529768 CA314167896 |
384 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| TCGA novel | 384 | T>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA408794898 rs1465473011 |
385 | C>R | No |
ClinGen TOPMed |
|
|
rs1237762650 CA408794901 |
385 | C>S | No |
ClinGen gnomAD |
|
|
CA408794904 rs1438114520 |
385 | C>W | No |
ClinGen gnomAD |
|
|
CA9838299 rs151316913 |
386 | H>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9838301 rs755722678 |
389 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA408794934 rs777301538 |
390 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA314167911 rs1036855912 |
390 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA9838302 rs777301538 |
390 | D>V | Variant assessed as Somatic; 4.62e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs757029790 CA9838304 |
393 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1399073913 CA408794951 CA408794949 |
393 | G>R | No |
ClinGen gnomAD |
|
|
CA9838306 rs745791223 |
394 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA9838307 rs149794718 |
395 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA408794959 rs149794718 |
395 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9838309 rs747075243 |
396 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA408794978 rs1568683359 |
398 | E>* | No |
ClinGen Ensembl |
|
|
rs1257769832 CA408794998 |
400 | N>K | No |
ClinGen gnomAD |
|
|
CA408795009 rs1199028815 |
402 | P>S | No |
ClinGen TOPMed |
|
|
rs1239031092 CA408795022 |
404 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs200469725 CA9838311 |
404 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9838313 rs770122276 |
408 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs905183490 CA314167949 |
409 | M>I | No |
ClinGen Ensembl |
|
|
CA9838314 rs201020039 |
409 | M>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs763444388 CA9838315 |
412 | E>K | No |
ClinGen ExAC gnomAD |
|
|
COSM3693456 CA9838318 rs369867507 |
413 | P>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs140335933 CA9838317 |
413 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 414 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9838323 rs778850470 |
416 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA9838324 rs750250426 |
417 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1278125791 CA408795112 |
418 | V>G | No |
ClinGen gnomAD |
|
|
rs555012361 CA314168014 |
423 | I>T | No |
ClinGen gnomAD |
|
|
COSM170985 CA9838326 rs780164709 |
424 | S>L | Variant assessed as Somatic; 0.0 impact. large_intestine breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA408795172 rs1270203620 |
427 | E>G | No |
ClinGen gnomAD |
|
|
rs764998026 CA9838340 |
429 | T>A | No |
ClinGen ExAC TOPMed |
|
|
rs550441401 CA9838341 |
431 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1330908618 CA408784171 |
432 | F>S | No |
ClinGen gnomAD |
|
|
CA9838342 rs758300202 |
433 | K>M | No |
ClinGen ExAC gnomAD |
|
|
CA9838343 rs758300202 |
433 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA408784181 rs1180566858 |
434 | K>E | No |
ClinGen TOPMed |
|
|
rs1257992307 CA408784190 |
435 | T>A | No |
ClinGen gnomAD |
|
|
CA408784191 rs1483212657 |
435 | T>K | No |
ClinGen TOPMed |
|
|
rs751429722 CA9838344 |
439 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs190470977 CA9838345 |
439 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA408784235 rs1038497612 |
442 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
CA314178216 rs1038497612 |
442 | N>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1310677388 CA408784243 |
443 | A>T | No |
ClinGen TOPMed |
|
|
CA9838349 rs777991726 |
443 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs898956918 CA314178222 |
445 | A>G | No |
ClinGen Ensembl |
|
|
CA9838351 rs374084712 |
446 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs145409038 CA9838352 |
447 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1290359743 CA408784269 |
448 | L>I | No |
ClinGen TOPMed |
|
|
rs746361852 CA9838353 |
449 | D>A | No |
ClinGen ExAC gnomAD |
|
|
CA9838354 rs772641348 |
450 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs146518162 CA9838355 |
452 | F>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1434009997 CA408784364 |
457 | V>G | No |
ClinGen gnomAD |
|
|
CA9838356 rs761432695 |
460 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA408784402 rs1165184912 |
462 | F>L | No |
ClinGen TOPMed |
|
|
rs756788600 CA314178256 |
464 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1600900983 TCGA novel CA408784413 |
464 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Ensembl |
|
rs1462707480 CA408784425 |
466 | A>P | No |
ClinGen TOPMed |
|
|
rs1366136334 CA408784429 |
466 | A>V | No |
ClinGen TOPMed |
|
|
rs1239485497 CA408784436 |
467 | K>N | No |
ClinGen gnomAD |
|
|
rs111786245 CA314178268 |
470 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA408784461 rs1307109193 |
471 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs764945096 CA9838357 |
473 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1178571708 CA408784493 |
475 | Y>C | No |
ClinGen gnomAD |
|
|
CA314178278 rs141082953 |
477 | H>P | No |
ClinGen ESP |
|
|
CA408784515 rs1218614718 |
478 | G>E | No |
ClinGen gnomAD |
|
|
CA9838358 rs772970209 |
479 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs561033073 CA314178281 |
479 | M>T | No |
ClinGen TOPMed |
|
| TCGA novel | 480 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA314178294 rs1003141099 |
481 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA408784541 rs1268985420 |
482 | S>A | No |
ClinGen gnomAD |
|
|
CA408784545 rs1188840301 |
482 | S>L | No |
ClinGen TOPMed |
|
|
CA408784547 rs766074119 |
483 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA9838361 rs751437496 |
484 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1160399840 CA408784583 |
488 | S>N | No |
ClinGen gnomAD |
|
|
rs553915565 CA9838363 |
489 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9838364 rs553915565 |
489 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9838362 rs754804189 |
489 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 490 | G>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs35658867 CA9838366 |
490 | G>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 492 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs754032798 CA9838367 |
492 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9838369 rs200376888 |
493 | H>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9838370 rs576290949 |
494 | V>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA408784617 rs1308201956 |
494 | V>I | No |
ClinGen TOPMed |
|
|
CA408784636 rs1297636007 |
497 | R>G | No |
ClinGen TOPMed |
|
|
CA408784640 rs1226169944 |
497 | R>K | No |
ClinGen TOPMed |
|
| TCGA novel | 501 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1267930980 CA408784680 |
503 | D>E | No |
ClinGen gnomAD |
|
|
rs1321088009 CA408784673 |
503 | D>N | No |
ClinGen gnomAD |
|
|
CA314178316 rs968159760 |
504 | K>R | No |
ClinGen Ensembl |
|
|
CA408784714 rs1219274142 |
507 | Q>E | No |
ClinGen gnomAD |
|
|
CA314178324 rs921290276 |
507 | Q>R | No |
ClinGen Ensembl |
|
|
CA408784726 rs1266938951 |
508 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA408784794 rs1171016018 |
514 | R>Q | No |
ClinGen TOPMed |
|
|
CA408784792 rs1197546194 |
514 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA9838374 rs558767765 |
515 | V>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9838384 rs764141350 |
522 | T>R | No |
ClinGen ExAC |
|
|
rs1354849303 CA408786854 |
523 | K>R | No |
ClinGen Ensembl |
|
|
rs995759848 CA314184514 |
525 | K>E | No |
ClinGen Ensembl |
|
|
rs753923235 CA9838385 |
526 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs757367903 CA9838386 COSM1026309 |
527 | K>N | endometrium Variant assessed as Somatic; 0.0001416 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1308937561 CA408786951 |
530 | E>D | No |
ClinGen gnomAD |
|
|
CA314184529 rs201394960 |
532 | K>R | No |
ClinGen 1000Genomes |
|
|
CA408786999 rs1204801020 |
534 | K>E | No |
ClinGen gnomAD |
|
|
CA9838387 rs779220829 |
535 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408787036 rs1481990468 |
536 | F>S | No |
ClinGen gnomAD |
|
|
CA9838388 rs750715985 CA408787046 |
537 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408787044 rs750715985 |
537 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758759884 CA9838389 |
538 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA408787065 rs758759884 |
538 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA408787080 rs1192002262 |
539 | V>L | No |
ClinGen gnomAD |
|
|
CA408787193 rs1410699182 |
545 | K>R | No |
ClinGen gnomAD |
|
|
rs769354839 CA9838393 |
548 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1300291038 CA408787316 |
551 | T>I | No |
ClinGen TOPMed |
|
|
rs953634596 CA314184548 |
553 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA408787456 rs1431274763 |
555 | C>R | No |
ClinGen gnomAD |
|
|
CA9838412 rs751976044 |
556 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs755484534 CA9838413 |
558 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1235822048 CA408787530 |
559 | E>K | No |
ClinGen gnomAD |
|
|
rs963510290 CA314184832 |
562 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA408787584 rs1406753049 |
564 | T>A | No |
ClinGen TOPMed |
|
|
rs748706262 CA9838415 |
565 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1238524880 CA408787602 |
567 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1378793079 CA408787616 |
568 | P>L | No |
ClinGen Ensembl |
|
|
CA314184844 rs747469225 |
570 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1483942795 CA408787649 |
572 | K>Q | No |
ClinGen TOPMed |
|
|
rs375534256 CA9838416 |
575 | A>T | No |
ClinGen ESP ExAC gnomAD |
|
|
CA9838418 rs745516781 |
583 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1470035240 CA408787838 |
586 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1235244321 CA408787832 |
586 | G>R | No |
ClinGen TOPMed |
|
|
CA408787868 rs1251149089 |
588 | H>Q | No |
ClinGen gnomAD |
|
|
CA9838420 rs775211499 |
588 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199972817 CA314184869 |
589 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA9838421 rs866338320 |
590 | S>N | No |
ClinGen Ensembl |
|
|
CA9838424 rs527952040 |
591 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs746833491 CA9838423 |
591 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA314184885 rs911567768 |
592 | Q>* | No |
ClinGen Ensembl |
|
|
CA9838427 rs548981418 |
594 | H>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9838426 rs548981418 |
594 | H>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9838428 rs773232325 |
599 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763169793 CA9838429 |
602 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA408788106 rs766721228 |
604 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766721228 CA9838430 |
604 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs17431878 CA9838431 VAR_051600 |
605 | V>M | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA408788146 rs1240228187 |
606 | K>N | No |
ClinGen gnomAD |
|
|
rs755423121 CA9838432 |
607 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs537943692 CA408788164 |
608 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA408788588 rs1033152132 |
609 | E>A | No |
ClinGen TOPMed |
|
|
rs1033152132 CA314186382 |
609 | E>V | No |
ClinGen TOPMed |
|
|
CA9838458 rs79232141 |
611 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA408788602 rs1344384108 |
611 | D>G | No |
ClinGen gnomAD |
|
|
CA314186386 rs372485588 |
614 | S>N | No |
ClinGen ESP |
|
|
rs754693618 CA9838459 |
615 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA9838460 rs780974892 |
617 | S>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA9838461 rs747910681 |
620 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1373356186 CA408788693 |
624 | S>N | No |
ClinGen gnomAD |
|
|
rs777603376 CA9838463 |
625 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs139288054 CA9838464 |
626 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs774628465 CA9838466 |
629 | G>C | No |
ClinGen ExAC gnomAD |
|
|
rs559318670 CA314186403 |
631 | D>G | No |
ClinGen 1000Genomes TOPMed |
|
|
CA408788745 rs559318670 |
631 | D>V | No |
ClinGen 1000Genomes TOPMed |
|
|
CA314186431 rs964082935 |
635 | T>S | No |
ClinGen Ensembl |
|
|
rs760979969 CA408788779 |
636 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs760979969 CA9838471 |
636 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs775878917 CA9838470 |
636 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA9838472 rs764561499 |
637 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA314186436 rs1015660628 |
640 | E>K | No |
ClinGen TOPMed |
|
|
CA9838474 rs762366925 |
642 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1227559910 CA408788831 |
643 | D>E | No |
ClinGen TOPMed |
|
|
rs765870716 CA9838475 |
643 | D>G | No |
ClinGen ExAC |
|
|
CA314186440 rs970813595 |
643 | D>H | No |
ClinGen TOPMed |
|
|
rs765870716 CA408788830 |
643 | D>V | No |
ClinGen ExAC |
|
|
CA9838476 rs370502808 |
644 | G>E | No |
ClinGen ESP ExAC gnomAD |
|
|
CA408788842 rs1365405237 |
645 | D>G | No |
ClinGen TOPMed |
|
|
CA9838477 rs754568531 |
646 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs780729439 CA9838478 |
647 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408788861 rs1450634471 |
648 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA314186447 rs372027298 |
649 | D>A | No |
ClinGen Ensembl |
|
|
rs755833178 CA9838480 |
651 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1458684063 CA408788888 |
652 | V>M | No |
ClinGen Ensembl |
|
|
rs749222406 CA9838482 |
654 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs189551926 CA9838483 |
658 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1415546496 CA408788944 |
660 | Q>R | No |
ClinGen gnomAD |
|
|
rs1458905135 CA408788949 |
661 | E>K | No |
ClinGen TOPMed |
|
|
CA9838485 rs764992971 |
661 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9838487 rs775546304 |
662 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA408788972 rs1460528871 |
664 | D>Y | No |
ClinGen gnomAD |
|
|
CA408789661 rs1206423434 |
679 | V>I | No |
ClinGen TOPMed |
|
|
rs1481344505 CA408789684 |
681 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA9838509 rs575697146 |
683 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA408789745 rs1474431084 |
686 | E>G | No |
ClinGen gnomAD |
|
|
rs773675742 CA9838510 |
687 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs368470074 CA314191573 |
690 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs368470074 CA9838512 |
690 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1600949785 CA408789827 |
693 | T>N | No |
ClinGen Ensembl |
|
| TCGA novel | 694 | C>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1168644707 CA408789845 |
695 | Y>H | No |
ClinGen gnomAD |
|
|
CA408789860 rs1462605213 |
696 | V>I | No |
ClinGen gnomAD |
|
|
CA408789889 rs1345490137 |
698 | Q>H | No |
ClinGen TOPMed |
|
|
CA314191575 rs569104103 |
698 | Q>K | No |
ClinGen Ensembl |
|
|
rs996159261 CA314191577 |
700 | P>L | No |
ClinGen Ensembl |
|
| TCGA novel | 702 | G>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs748407748 CA9838529 |
702 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA408790019 rs1191997921 |
704 | R>S | No |
ClinGen TOPMed |
|
|
CA408790022 rs1451769353 |
705 | P>A | No |
ClinGen TOPMed |
|
|
rs374815117 CA9838530 |
707 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA408790033 rs374815117 |
707 | F>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA314193315 rs200044840 |
710 | W>R | No |
ClinGen Ensembl |
|
|
rs1286722425 CA408790071 |
712 | D>N | No |
ClinGen gnomAD |
|
|
rs1214814923 CA408790115 |
715 | W>G | No |
ClinGen gnomAD |
|
|
rs749753975 CA9838532 |
717 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1237084836 CA408790156 |
718 | R>K | No |
ClinGen gnomAD |
|
|
CA9838533 rs367835554 |
720 | H>L | No |
ClinGen ESP ExAC gnomAD |
|
|
CA408790189 rs1273089291 |
721 | M>V | No |
ClinGen TOPMed |
|
|
rs1446754618 CA408790209 |
722 | H>N | No |
ClinGen gnomAD |
|
|
rs774801547 CA9838535 |
722 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs774801547 CA9838534 |
722 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA9838536 rs768325239 COSM1194212 |
725 | A>E | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs768325239 CA408790257 |
725 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1600956006 CA408790294 |
728 | E>D | No |
ClinGen Ensembl |
|
| TCGA novel | 728 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9838537 rs776402916 |
729 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs761620013 CA9838538 |
731 | Y>S | No |
ClinGen ExAC |
|
|
rs1474808192 CA408790352 |
732 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA408790393 rs1331860252 |
735 | N>S | No |
ClinGen TOPMed |
|
|
CA408790431 rs1600956061 |
738 | K>R | No |
ClinGen Ensembl |
|
|
CA408790442 rs1251173837 |
739 | I>F | No |
ClinGen gnomAD |
|
|
CA314193337 rs1042503462 |
739 | I>N | No |
ClinGen Ensembl |
|
|
rs34576397 CA9838540 |
740 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408790464 rs1395652902 |
741 | A>S | No |
ClinGen gnomAD |
|
|
CA408790477 rs1399886874 |
742 | T>S | No |
ClinGen gnomAD |
|
|
CA314193344 rs945991190 |
746 | L>R | No |
ClinGen TOPMed |
|
|
CA314193366 rs936715850 |
748 | D>N | No |
ClinGen Ensembl |
|
|
rs1053790062 CA314193371 |
749 | V>A | No |
ClinGen TOPMed |
|
|
rs1346752698 CA408790563 |
749 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA9838542 rs376078655 |
753 | I>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1167060689 CA408790631 |
754 | E>A | No |
ClinGen TOPMed |
|
|
CA9838543 rs751554371 |
755 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA408790670 rs1350661018 |
757 | H>Q | No |
ClinGen gnomAD |
|
|
CA9838546 rs752903135 |
757 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1378941092 CA408790672 |
758 | G>S | No |
ClinGen TOPMed |
|
|
CA9838547 rs756394820 |
758 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA9838548 rs543499886 |
763 | M>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1317928982 CA408790738 |
763 | M>L | No |
ClinGen gnomAD |
|
|
rs1568787217 CA408790749 |
763 | M>T | No |
ClinGen Ensembl |
|
|
rs749672749 CA408790765 |
764 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs749672749 CA9838549 |
764 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA314193410 rs942511936 |
764 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs766129140 CA9838561 |
768 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs551324165 CA314197019 |
768 | S>R | No |
ClinGen 1000Genomes |
|
|
rs779992217 CA9838563 |
769 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs566632350 CA9838562 |
769 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1234572708 CA408791725 |
770 | E>Q | No |
ClinGen gnomAD |
|
|
CA9838566 rs756268168 |
775 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752778505 CA9838565 |
775 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA408791790 rs778075118 |
776 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA408791798 rs1165230929 |
777 | W>R | No |
ClinGen gnomAD |
|
|
rs754109362 CA9838568 |
780 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1407758360 CA408791868 |
782 | K>R | No |
ClinGen gnomAD |
|
|
CA314197049 rs267605910 |
783 | Q>* | No |
ClinGen Ensembl |
|
|
rs200731940 CA9838570 |
784 | H>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs555729193 CA314197051 |
785 | S>A | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs574165917 CA314197058 |
785 | S>L | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs555729193 CA314197054 |
785 | S>P | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA408791907 rs1357797541 |
786 | G>E | No |
ClinGen gnomAD |
|
|
CA314197067 rs1054038808 |
787 | E>K | No |
ClinGen gnomAD |
|
|
rs746385669 CA9838571 |
788 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408791958 rs1216473184 |
791 | H>R | No |
ClinGen gnomAD |
|
|
CA408791979 rs1380027472 |
793 | R>G | No |
ClinGen TOPMed |
|
|
CA408791981 rs1165985681 |
793 | R>K | No |
ClinGen TOPMed |
|
|
CA408792003 rs1411985150 |
795 | I>F | No |
ClinGen TOPMed |
|
|
CA9838572 rs185047544 |
796 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9838575 rs556793405 |
801 | R>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
RCV000890413 rs36058204 CA9838576 |
801 | R>T | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA314197092 rs867813237 |
802 | S>N | No |
ClinGen Ensembl |
|
|
CA408792087 rs1187782220 |
803 | K>Q | No |
ClinGen gnomAD |
|
|
rs1372184568 CA408792124 |
806 | A>T | No |
ClinGen gnomAD |
|
|
CA408792132 rs1265437554 |
806 | A>V | No |
ClinGen TOPMed |
|
|
CA9838578 rs770744773 |
809 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs748941374 CA9838577 |
809 | Y>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774081105 CA9838579 |
810 | R>G | No |
ClinGen ExAC TOPMed |
|
|
CA9838580 rs759400800 |
811 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs942879383 CA314197138 |
811 | T>I | No |
ClinGen Ensembl |
|
|
CA408792192 rs1311619485 |
812 | L>F | No |
ClinGen gnomAD |
|
|
CA408792190 rs1434604161 |
812 | L>S | No |
ClinGen gnomAD |
|
|
CA9838581 rs767451753 |
813 | N>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 814 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs553756514 CA9838583 |
814 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9838584 rs764118124 |
815 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1324965556 CA408792218 |
815 | A>T | No |
ClinGen gnomAD |
|
|
rs754080209 CA9838585 |
816 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs765574236 CA9838587 |
822 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA9838592 rs755630412 |
825 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770493098 CA9838595 |
827 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA9838593 rs371403889 |
827 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs371403889 CA9838594 |
827 | P>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM1220362 CA9838597 rs745681312 |
828 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs372972203 CA9838598 |
828 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA314197188 rs778662802 |
829 | S>P | No |
ClinGen TOPMed |
|
|
CA314197193 rs942439132 |
831 | E>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 834 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1348518006 CA408792499 |
835 | I>V | No |
ClinGen TOPMed |
|
|
rs1384096002 CA408792520 |
836 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA408792558 rs1478290296 |
838 | E>G | No |
ClinGen TOPMed |
|
|
CA9838601 rs144252568 |
845 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1411476 CA9838602 rs148716053 |
845 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs765401656 CA9838604 |
846 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA408792696 rs1348309875 |
847 | Y>C | No |
ClinGen gnomAD |
|
|
rs750777747 CA9838605 |
847 | Y>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1600971172 CA408792712 |
848 | Y>S | No |
ClinGen Ensembl |
|
|
CA9838608 rs752096725 |
851 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA314197255 rs959240821 |
853 | Q>H | No |
ClinGen Ensembl |
|
|
rs543227229 CA9838610 |
859 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 860 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs756881455 CA408792918 |
861 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9838612 rs756881455 |
861 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408792938 rs1325679393 |
862 | S>F | No |
ClinGen TOPMed |
|
|
CA408792924 rs1362373736 |
862 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
rs62211758 CA408792991 |
865 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs771829423 RCV000736217 CA9838615 |
865 | D>N | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1327936948 CA408792999 |
866 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs200315522 CA9838617 |
867 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA9838619 rs776727741 |
869 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408793047 rs1600971392 |
869 | N>T | No |
ClinGen Ensembl |
|
|
CA9838620 rs375246652 |
870 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9838621 rs375246652 |
870 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 871 | L>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs773547250 CA9838622 |
872 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA9838623 rs763325956 |
873 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 875 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs751975814 CA9838625 |
875 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9838626 rs760028978 |
876 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs760028978 CA408793126 |
876 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1249084389 CA408793141 |
877 | D>Y | No |
ClinGen gnomAD |
|
| TCGA novel | 879 | L>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9838627 rs767931825 |
879 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1183422132 CA408793176 |
880 | S>F | No |
ClinGen gnomAD |
|
|
rs181763739 CA9838628 |
881 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs369820748 CA9838630 COSM1026315 |
882 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA408793192 rs1350521745 |
882 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs369820748 CA408793187 |
882 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1461584475 CA408793236 |
886 | P>L | No |
ClinGen gnomAD |
|
|
rs1303091960 CA408793287 |
891 | R>K | No |
ClinGen TOPMed |
|
|
CA408793303 rs1394321007 |
892 | S>R | No |
ClinGen gnomAD |
|
| TCGA novel | 893 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs750060852 CA9838631 |
894 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs1354617506 CA408793354 |
896 | S>N | No |
ClinGen gnomAD |
|
|
CA408793365 rs1291183247 |
897 | D>N | No |
ClinGen gnomAD |
|
|
rs1379591872 CA408793381 |
898 | P>S | No |
ClinGen TOPMed |
|
|
rs1314489480 CA408793413 |
900 | P>L | No |
ClinGen gnomAD |
|
|
CA9838632 rs758054043 |
900 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1391069154 CA408793422 |
901 | G>A | No |
ClinGen TOPMed |
|
|
CA9838634 rs746807394 |
901 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs780962137 CA408793441 |
903 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9838636 rs780962137 |
903 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756123654 CA408782280 |
905 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756123654 CA9838657 |
905 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200681361 CA9838658 |
907 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA314188398 rs915144325 |
908 | Y>H | No |
ClinGen Ensembl |
|
|
CA9838661 rs550281572 |
910 | S>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9838663 rs772308113 |
913 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA314188402 rs183733610 |
913 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs183733610 CA9838662 |
913 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs183733610 CA314188406 |
913 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs77536106 CA9838664 |
914 | L>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1303300907 CA408782342 |
915 | P>S | No |
ClinGen gnomAD |
|
|
rs761032721 CA9838665 |
917 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA408782368 rs764611258 |
919 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9838666 rs764611258 |
919 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408782367 rs764611258 |
919 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408782374 rs1330351222 |
920 | A>S | No |
ClinGen TOPMed |
|
|
CA9838668 rs547973892 |
921 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs369010616 CA9838667 |
921 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs765923545 CA9838669 |
923 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA408782391 rs1465397386 |
923 | L>P | No |
ClinGen gnomAD |
|
|
rs754727842 CA9838671 |
926 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA408782412 rs1167860847 |
927 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA408782421 rs1452422907 |
928 | G>E | No |
ClinGen gnomAD |
|
|
rs112071162 CA314188460 |
931 | L>P | No |
ClinGen Ensembl |
|
|
CA9838672 rs767148539 |
934 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9838673 rs752549027 |
936 | H>D | No |
ClinGen ExAC gnomAD |
|
|
rs1204039468 CA408782480 |
937 | Q>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1253036215 CA408782484 |
938 | W>G | No |
ClinGen TOPMed gnomAD |
|
|
CA408782502 rs1600974644 |
940 | F>V | No |
ClinGen Ensembl |
|
|
CA9838674 rs756065557 |
941 | N>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 945 | H>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1457457196 CA408782532 |
945 | H>Y | No |
ClinGen gnomAD |
|
|
rs777884475 CA9838675 |
946 | V>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 952 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs776268666 COSM1411477 CA9838677 |
954 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA408782596 rs1276013897 |
954 | T>S | No |
ClinGen gnomAD |
|
|
CA408782601 rs1435998013 |
955 | H>Y | No |
ClinGen TOPMed |
|
|
rs576918838 CA314188494 |
957 | M>L | No |
ClinGen Ensembl |
|
|
CA314188507 rs868538841 |
959 | S>F | No |
ClinGen Ensembl |
|
|
rs746071764 CA9838680 |
960 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs779105603 CA9838679 |
960 | I>V | No |
ClinGen ExAC TOPMed |
|
|
rs1330021566 CA408782647 |
961 | E>D | No |
ClinGen gnomAD |
|
|
rs772355353 CA9838681 |
965 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs772355353 CA408782674 |
965 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA9838701 rs768999648 |
966 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM4136854 rs781606814 CA9838702 |
973 | Y>N | ovary [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA314192666 rs545390762 |
974 | T>A | No |
ClinGen 1000Genomes |
|
|
rs1308793604 CA408783214 |
977 | L>P | No |
ClinGen gnomAD |
|
|
rs748589731 CA9838703 |
979 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 980 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 980 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 981 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1333938732 CA408783283 |
982 | P>S | No |
ClinGen gnomAD |
|
|
CA408783316 rs1337558611 |
984 | A>V | No |
ClinGen gnomAD |
|
|
rs1226054799 CA408783319 |
985 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1600985882 CA408783330 |
985 | R>S | No |
ClinGen Ensembl |
|
|
CA9838709 rs760460775 |
987 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9838708 rs775261403 |
987 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9838712 rs531956765 |
991 | H>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9838713 rs145485767 |
992 | C>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA408783459 rs1240958361 |
994 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1191020678 CA408783546 |
1000 | L>P | No |
ClinGen gnomAD |
|
|
rs758483395 CA9838715 |
1001 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1171120384 CA408783590 |
1003 | V>G | No |
ClinGen gnomAD |
|
|
COSM1326773 CA9838717 rs751778845 |
1005 | Q>H | ovary Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA9838719 rs148822034 |
1007 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9838720 rs748532245 |
1008 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs375899439 CA9838721 |
1011 | S>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1437456398 CA408783699 |
1011 | S>P | No |
ClinGen gnomAD |
|
|
rs1568817335 CA408783711 |
1012 | T>S | No |
ClinGen Ensembl |
No associated diseases with Q9BVI0
7 regional properties for Q9BVI0
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Zinc finger, PHD-type | 654 - 698 | IPR001965 |
| domain | Tudor domain | 11 - 71 | IPR002999-1 |
| domain | Tudor domain | 85 - 141 | IPR002999-2 |
| domain | Zinc finger C2H2-type | 452 - 482 | IPR013087 |
| conserved_site | Zinc finger, PHD-type, conserved site | 655 - 697 | IPR019786 |
| domain | PHD finger protein 20, AT hook | 176 - 280 | IPR022255 |
| domain | DNA repair protein Crb2, Tudor domain | 90 - 136 | IPR041297 |
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| histone acetyltransferase complex | A protein complex that possesses histone acetyltransferase activity. |
| MLL1 complex | A protein complex that can methylate lysine-4 of histone H3. MLL1/MLL is the catalytic methyltransferase subunit, and the complex also contains the core components ASH2L, HCFC1/HCF1 WDR5 and RBBP5. |
| NSL complex | A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residues at several positions. In human, it contains the catalytic subunit MOF, NSL1/KIAA1267, NSL2/KANSL2, NSL3/KANSL3, MCRS1, PHF20, OGT1, WDR5 and HCF1. |
| nuclear membrane | Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| metal ion binding | Binding to a metal ion. |
9 GO annotations of biological process
| Name | Definition |
|---|---|
| chromatin organization | The assembly or remodeling of chromatin composed of DNA complexed with histones, other associated proteins, and sometimes RNA. |
| histone acetylation | The modification of a histone by the addition of an acetyl group. |
| histone H4-K16 acetylation | The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 16 of the histone. |
| histone H4-K5 acetylation | The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 5 of the histone. |
| histone H4-K8 acetylation | The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 8 of the histone. |
| positive regulation of DNA-templated transcription | Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription. |
| positive regulation of histone H3-K4 methylation | Any process that activates or increases the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 4 of histone H3. |
| regulation of dosage compensation by inactivation of X chromosome | Any process that modulates the frequency, rate or extent of dosage compensation, by inactivation of X chromosome. |
| regulation of transcription by RNA polymerase II | Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MTKHPPNRRG | ISFEVGAQLE | ARDRLKNWYP | AHIEDIDYEE | GKVLIHFKRW | NHRYDEWFCW |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DSPYLRPLEK | IQLRKEGLHE | EDGSSEFQIN | EQVLACWSDC | RFYPAKVTAV | NKDGTYTVKF |
| 130 | 140 | 150 | 160 | 170 | 180 |
| YDGVVQTVKH | IHVKAFSKDQ | NIVGNARPKE | TDHKSLSSSP | DKREKFKEQR | KATVNVKKDK |
| 190 | 200 | 210 | 220 | 230 | 240 |
| EDKPLKTEKR | PKQPDKEGKL | ICSEKGKVSE | KSLPKNEKED | KENISENDRE | YSGDAQVDKK |
| 250 | 260 | 270 | 280 | 290 | 300 |
| PENDIVKSPQ | ENLREPKRKR | GRPPSIAPTA | VDSNSQTLQP | ITLELRRRKI | SKGCEVPLKR |
| 310 | 320 | 330 | 340 | 350 | 360 |
| PRLDKNSSQE | KSKNYSENTD | KDLSRRRSSR | LSTNGTHEIL | DPDLVVSDLV | DTDPLQDTLS |
| 370 | 380 | 390 | 400 | 410 | 420 |
| STKESEEGQL | KSALEAGQVS | SALTCHSFGD | GSGAAGLELN | CPSMGENTMK | TEPTSPLVEL |
| 430 | 440 | 450 | 460 | 470 | 480 |
| QEISTVEVTN | TFKKTDDFGS | SNAPAVDLDH | KFRCKVVDCL | KFFRKAKLLH | YHMKYFHGME |
| 490 | 500 | 510 | 520 | 530 | 540 |
| KSLEPEESPG | KRHVQTRGPS | ASDKPSQETL | TRKRVSASSP | TTKDKEKNKE | KKFKEFVRVK |
| 550 | 560 | 570 | 580 | 590 | 600 |
| PKKKKKKKKK | TKPECPCSEE | ISDTSQEPSP | PKAFAVTRCG | SSHKPGVHMS | PQLHGPESGH |
| 610 | 620 | 630 | 640 | 650 | 660 |
| HKGKVKALEE | DNLSESSSES | FLWSDDEYGQ | DVDVTTNPDE | ELDGDDRYDF | EVVRCICEVQ |
| 670 | 680 | 690 | 700 | 710 | 720 |
| EENDFMIQCE | ECQCWQHGVC | MGLLEENVPE | KYTCYVCQDP | PGQRPGFKYW | YDKEWLSRGH |
| 730 | 740 | 750 | 760 | 770 | 780 |
| MHGLAFLEEN | YSHQNAKKIV | ATHQLLGDVQ | RVIEVLHGLQ | LKMSILQSRE | HPDLPLWCQP |
| 790 | 800 | 810 | 820 | 830 | 840 |
| WKQHSGEGRS | HFRNIPVTDT | RSKEEAPSYR | TLNGAVEKPR | PLALPLPRSV | EESYITSEHC |
| 850 | 860 | 870 | 880 | 890 | 900 |
| YQKPRAYYPA | VEQKLVVETR | GSALDDAVNP | LHENGDDSLS | PRLGWPLDQD | RSKGDSDPKP |
| 910 | 920 | 930 | 940 | 950 | 960 |
| GSPKVKEYVS | KKALPEEAPA | RKLLDRGGEG | LLSSQHQWQF | NLLTHVESLQ | DEVTHRMDSI |
| 970 | 980 | 990 | 1000 | 1010 | |
| EKELDVLESW | LDYTGELEPP | EPLARLPQLK | HCIKQLLMDL | GKVQQIALCC | ST |