Q96KG9
Gene name |
SCYL1 (CVAK90, GKLP, NTKL, TAPK, TEIF, TRAP) |
Protein name |
N-terminal kinase-like protein |
Names |
Coated vesicle-associated kinase of 90 kDa, SCY1-like protein 1, Telomerase regulation-associated protein, Telomerase transcriptional element-interacting factor, Teratoma-associated tyrosine kinase |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:57410 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q96KG9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q96KG9-F1 | Predicted | AlphaFoldDB |
709 variants for Q96KG9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV000627807 rs1554967681 CA381260435 RCV000853082 |
57 | Q>* | CALFAN syndrome Acute infantile liver failure-cerebellar ataxia-peripheral sensory motor neuropathy syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA381260631 RCV000627806 rs1554967761 |
86 | E>* | CALFAN syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000627808 rs942522644 CA223996997 RCV000853083 |
105 | A>V | CALFAN syndrome Acute infantile liver failure-cerebellar ataxia-peripheral sensory motor neuropathy syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000482470 RCV001267150 rs755131489 |
133 | N>missing | Inborn genetic diseases [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001329770 rs1320473430 CA381261064 |
151 | R>* | Acute infantile liver failure-cerebellar ataxia-peripheral sensory motor neuropathy syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000853313 CA6099524 rs535912271 |
176 | K>* | Acute infantile liver failure-cerebellar ataxia-peripheral sensory motor neuropathy syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP |
|
RCV001336499 RCV002547357 CA6099601 rs141670485 |
268 | M>I | Acute infantile liver failure-cerebellar ataxia-peripheral sensory motor neuropathy syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs143168314 RCV002548366 RCV002505476 RCV000972290 CA6099638 |
293 | F>V | Inborn genetic diseases Acute infantile liver failure-cerebellar ataxia-peripheral sensory motor neuropathy syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000203252 rs864309664 |
313 | V>missing | Spinocerebellar ataxia type 21 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1855366408 RCV001265794 |
347 | Q>* | Inborn genetic diseases [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001266765 rs773812714 |
449 | T>missing | Inborn genetic diseases [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1554969894 RCV000661920 CA381263212 |
471 | A>V | Acute infantile liver failure-cerebellar ataxia-peripheral sensory motor neuropathy syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000627805 CA381263253 RCV000853081 rs1554969925 |
478 | D>G | CALFAN syndrome Acute infantile liver failure-cerebellar ataxia-peripheral sensory motor neuropathy syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV003169521 RCV000985231 rs374754187 CA6099834 |
503 | C>R | Inborn genetic diseases Acute infantile liver failure-cerebellar ataxia-peripheral sensory motor neuropathy syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000203253 rs864309665 |
504 | A>missing | Spinocerebellar ataxia type 21 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1590740858 RCV000853084 |
512 | C>missing | Spinocerebellar ataxia type 21 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs864309667 CA278772 RCV000203251 |
546 | Q>* | Spinocerebellar ataxia type 21 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000627804 rs1554970375 RCV000853080 CA381264233 |
628 | Q>* | CALFAN syndrome Acute infantile liver failure-cerebellar ataxia-peripheral sensory motor neuropathy syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV002547282 rs200518123 CA6099976 RCV000963281 |
645 | D>N | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000623276 rs759830598 |
689 | P>missing | Inborn genetic diseases [ClinVar] | Yes |
ClinVar dbSNP |
|
CA6100100 RCV001336498 rs767319743 |
756 | G>A | Acute infantile liver failure-cerebellar ataxia-peripheral sensory motor neuropathy syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1242476470 CA381260093 |
5 | A>S | No |
ClinGen gnomAD |
|
|
rs778487235 CA6099395 |
6 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381260106 rs1468006936 |
7 | D>V | No |
ClinGen TOPMed |
|
|
CA381260112 rs1353313734 |
8 | P>L | No |
ClinGen gnomAD |
|
|
rs748526048 CA6099396 |
10 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381260133 rs1185063014 |
12 | F>I | No |
ClinGen gnomAD |
|
|
CA381260153 rs1242532999 |
14 | F>L | No |
ClinGen gnomAD |
|
|
CA223996186 rs867463453 |
15 | E>* | No |
ClinGen gnomAD |
|
|
CA381260155 rs867463453 |
15 | E>K | No |
ClinGen gnomAD |
|
|
rs758829284 CA381260162 |
16 | L>I | No |
ClinGen ExAC gnomAD |
|
|
CA6099397 rs758829284 |
16 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1452366899 CA381260174 |
18 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1213974283 CA381260199 |
21 | P>L | No |
ClinGen Ensembl |
|
| TCGA novel | 24 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1413186367 CA381260227 |
26 | P>S | No |
ClinGen gnomAD |
|
|
CA6099398 rs566948339 |
27 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs747601793 CA6099399 |
28 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA223996276 rs916631483 |
30 | A>G | No |
ClinGen Ensembl |
|
|
rs535917264 CA6099400 |
33 | R>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA381260280 rs1307659425 |
35 | R>C | No |
ClinGen gnomAD |
|
|
rs1376284310 CA381260284 |
35 | R>P | No |
ClinGen gnomAD |
|
|
CA381260313 rs1232845683 |
38 | A>T | No |
ClinGen gnomAD |
|
|
CA6099412 rs758988026 |
39 | T>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 41 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6099413 rs764723141 |
41 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6099414 rs752404870 |
42 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA381260342 rs974182929 |
43 | V>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs974182929 CA223996592 |
43 | V>M | No |
ClinGen gnomAD |
|
|
rs909308574 CA223996597 |
45 | I>V | No |
ClinGen TOPMed |
|
|
rs1341978436 CA381260368 |
47 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA6099416 rs758025574 |
48 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA381260374 rs1209964021 |
48 | Y>H | No |
ClinGen gnomAD |
|
|
CA6099417 rs778242705 |
49 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs1590719352 CA381260390 |
50 | V>A | No |
ClinGen Ensembl |
|
|
CA6099419 rs757808392 |
50 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA381260406 rs1373070562 |
53 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA6099421 rs745942710 |
54 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1415442099 CA381260421 |
55 | E>G | No |
ClinGen TOPMed |
|
|
rs1388692076 CA381260417 |
55 | E>K | No |
ClinGen gnomAD |
|
|
rs1404344726 CA381260438 |
57 | Q>L | No |
ClinGen gnomAD |
|
|
CA6099422 rs770070746 |
58 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs11548539 CA223996646 |
59 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
rs11548539 CA6099424 |
59 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA6099425 rs371540545 |
61 | A>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1245472113 CA381260471 |
63 | A>T | No |
ClinGen gnomAD |
|
| TCGA novel | 66 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381260500 rs1267093507 |
67 | R>C | No |
ClinGen gnomAD |
|
|
rs1267093507 CA381260501 |
67 | R>G | No |
ClinGen gnomAD |
|
|
rs773092111 CA6099426 |
67 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA381260499 rs1267093507 |
67 | R>S | No |
ClinGen gnomAD |
|
| TCGA novel | 69 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6099428 rs770914771 |
72 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs776484564 CA6099429 |
72 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs770914771 CA381260531 |
72 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA223996683 rs759455952 |
75 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759455952 CA6099430 |
75 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs972059346 CA381260550 |
75 | N>I | No |
ClinGen TOPMed gnomAD |
|
|
rs972059346 CA223996685 |
75 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs764774581 CA6099431 |
78 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA381260578 rs1367162810 |
80 | I>L | No |
ClinGen gnomAD |
|
|
CA6099432 rs752169740 |
83 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1359896541 CA381260627 |
85 | T>R | No |
ClinGen gnomAD |
|
|
CA381260650 rs1304358485 |
88 | C>* | No |
ClinGen gnomAD |
|
|
rs775001054 CA381260649 |
88 | C>F | No |
ClinGen ExAC gnomAD |
|
|
CA6099451 rs775001054 |
88 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs762308510 CA6099452 |
89 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 90 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs768047260 CA6099456 |
92 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs761516991 CA381260671 |
92 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA6099455 rs761516991 |
92 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA223996966 rs75886653 |
96 | V>G | No |
ClinGen Ensembl |
|
|
CA381260695 rs1565067150 |
96 | V>M | No |
ClinGen Ensembl |
|
|
CA6099457 rs750789628 COSM930406 |
98 | P>L | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA223996989 rs986729376 |
100 | G>E | No |
ClinGen Ensembl |
|
|
CA381260728 rs1447736331 |
101 | I>R | No |
ClinGen TOPMed |
|
|
rs766945284 CA381260739 |
103 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6099459 rs766945284 |
103 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6099460 rs753980779 |
105 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381260759 rs1176687635 |
106 | R>I | No |
ClinGen gnomAD |
|
|
rs369392939 CA6099462 |
107 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369392939 CA381260762 |
107 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6099464 rs55662663 |
108 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs370992903 CA6099465 |
110 | G>D | No |
ClinGen ESP ExAC gnomAD |
|
|
rs377002535 CA223997022 |
110 | G>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA381260789 rs1565067301 |
111 | G>V | No |
ClinGen Ensembl |
|
|
CA6099467 rs769734147 |
114 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA381260818 rs1439462293 |
116 | E>A | No |
ClinGen gnomAD |
|
|
CA381260824 rs1297082212 |
117 | I>L | No |
ClinGen gnomAD |
|
|
rs947549056 CA223997051 |
117 | I>N | No |
ClinGen Ensembl |
|
|
CA6099468 rs775336730 |
118 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs78243061 CA6099473 |
125 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6099472 rs78243061 RCV000901681 |
125 | V>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1354449410 CA381260897 |
126 | K>R | No |
ClinGen TOPMed |
|
|
CA223997181 rs769691895 |
129 | S>G | No |
ClinGen Ensembl |
|
|
rs1328840773 CA381260943 |
133 | N>S | No |
ClinGen TOPMed |
|
|
rs771867385 CA381260947 |
134 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771867385 CA6099493 |
134 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs367777193 CA6099495 |
136 | S>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1418855073 CA381260980 |
138 | I>T | No |
ClinGen TOPMed |
|
|
rs771481228 CA6099496 |
140 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6099497 rs551199259 |
141 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6099498 rs759991138 |
142 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs765725743 CA6099499 |
143 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762951225 CA6099501 |
146 | A>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 146 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6099503 rs751833875 |
147 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1219098038 CA381261053 |
149 | V>A | No |
ClinGen gnomAD |
|
|
CA6099505 rs371499287 |
149 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381261050 rs371499287 |
149 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381261057 rs1282350048 |
150 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA381261063 rs1320473430 |
151 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA6099506 rs753631575 |
151 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6099507 rs753631575 |
151 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778854073 CA6099508 |
152 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs778854073 CA381261066 |
152 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs571188091 CA6099510 RCV000895800 |
154 | E>D | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 155 | W>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6099511 rs777408861 |
157 | L>P | No |
ClinGen ExAC gnomAD |
|
| rs1384106579 | 159 | G>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1370594528 CA381261112 |
159 | G>S | No |
ClinGen TOPMed |
|
|
CA6099513 rs770665941 |
163 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs887226483 CA223997332 |
164 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
COSM1746472 rs776880516 COSM1746473 CA6099514 |
165 | S>L | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs770204666 CA6099516 |
167 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA381261169 rs1324226029 |
167 | Q>L | No |
ClinGen TOPMed |
|
|
rs763433840 CA6099518 |
168 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6099521 rs762057890 |
170 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs372370132 CA223997364 |
171 | G>W | No |
ClinGen ESP TOPMed gnomAD |
|
| TCGA novel | 173 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs997519760 CA223997374 |
173 | P>S | No |
ClinGen Ensembl |
|
|
CA6099522 rs573532447 |
175 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA6099523 rs753591753 |
175 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753591753 CA381261215 |
175 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381261213 rs573532447 |
175 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381261239 rs752740301 |
179 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6099526 rs752740301 |
179 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201564248 CA6099528 |
180 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA381261258 rs1172759064 |
182 | E>V | No |
ClinGen gnomAD |
|
|
CA381261266 rs1463415404 |
183 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
COSM1188301 rs367912230 CA223997468 |
187 | P>L | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA381261296 rs367912230 |
187 | P>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 188 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6099530 rs756872062 |
189 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6099531 rs780829775 |
190 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1401656669 CA381261312 |
190 | A>S | No |
ClinGen gnomAD |
|
|
CA223997469 rs917662110 |
192 | S>N | No |
ClinGen TOPMed |
|
|
CA6099532 rs745499930 |
193 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1234283461 CA381261341 |
194 | G>D | No |
ClinGen gnomAD |
|
| TCGA novel | 194 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200014873 CA6099533 |
195 | R>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1590721254 CA381261353 |
196 | V>G | No |
ClinGen Ensembl |
|
|
CA381261376 rs1458138115 |
199 | E>D | No |
ClinGen gnomAD |
|
|
CA381261371 rs1262490357 |
199 | E>K | No |
ClinGen gnomAD |
|
|
CA381261411 rs1430617569 |
202 | S>L | No |
ClinGen gnomAD |
|
|
CA6099557 rs774776195 |
205 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA6099558 rs536228379 |
207 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs555914644 CA6099559 |
207 | R>H | Variant assessed as Somatic; 4.69e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA381261464 rs773144330 |
210 | C>F | No |
ClinGen ExAC gnomAD |
|
|
rs773144330 CA6099560 |
210 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs200408408 CA6099561 |
212 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6099562 rs766462147 |
212 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 214 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381261497 rs1362414749 |
215 | V>F | No |
ClinGen gnomAD |
|
|
rs779429043 CA6099563 |
217 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs552468853 CA223998766 |
219 | P>S | No |
ClinGen Ensembl |
|
|
CA381261534 rs1325002140 |
221 | P>A | No |
ClinGen TOPMed |
|
|
rs751602298 CA381261538 |
222 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751602298 CA381261539 |
222 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6099567 rs757117609 |
227 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371041571 CA6099568 |
227 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA6099569 rs371041571 |
227 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6099570 rs755816716 |
228 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA381261576 rs576008769 |
229 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 229 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6099571 rs576008769 |
229 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6099572 rs754208663 |
230 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA6099573 rs755403733 |
231 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA381261610 rs1483762144 |
232 | I>M | No |
ClinGen gnomAD |
|
|
RCV000909434 rs201043872 CA6099585 |
232 | I>T | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA6099586 rs761837721 |
233 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA6099587 rs374654060 |
235 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6099588 rs749966732 |
241 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs980910152 CA223998904 |
246 | A>G | No |
ClinGen Ensembl |
|
| TCGA novel | 250 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381261721 rs1349726565 |
250 | V>M | No |
ClinGen gnomAD |
|
|
rs760039895 CA6099589 |
251 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs558695770 CA6099590 |
251 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381261740 rs1395012839 |
253 | N>T | No |
ClinGen TOPMed |
|
|
CA223998915 rs973053915 |
254 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1479239585 CA381261755 |
255 | A>G | No |
ClinGen TOPMed |
|
|
rs578183894 CA6099591 |
256 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6099592 rs370357462 |
256 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA6099593 rs779290763 |
257 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs752965602 CA6099594 |
259 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA6099596 rs531866682 |
262 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA223998944 rs148421552 |
262 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6099597 rs148421552 |
262 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs531866682 CA381261795 |
262 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1484649724 CA381261797 |
263 | A>T | No |
ClinGen TOPMed |
|
|
rs1277907116 CA381261802 |
263 | A>V | No |
ClinGen TOPMed |
|
|
rs1346911421 CA381261815 |
266 | G>S | No |
ClinGen TOPMed |
|
|
CA6099600 rs746131020 |
268 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6099599 rs373815325 |
268 | M>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1479675080 CA381261840 |
269 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs774215524 CA6099602 |
270 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761461911 COSM1509474 COSM1509473 CA6099603 |
271 | R>C | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
COSM930407 CA6099604 COSM1585919 rs201160219 |
271 | R>H | urinary_tract endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA223998990 rs201160219 |
271 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs761461911 CA381261850 |
271 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6099605 rs773093373 |
272 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs1469205286 CA381261864 |
273 | V>A | No |
ClinGen gnomAD |
|
|
CA381261868 rs1416486462 |
274 | E>Q | No |
ClinGen TOPMed |
|
|
CA6099606 rs760594349 |
275 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs562713747 CA381261883 |
276 | N>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6099607 rs562713747 |
276 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381261908 rs1167714541 |
280 | E>V | No |
ClinGen TOPMed |
|
|
rs750538381 CA6099635 |
285 | K>I | No |
ClinGen ExAC gnomAD |
|
|
rs915308957 CA224001116 |
286 | E>Q | No |
ClinGen TOPMed |
|
|
rs369729088 CA6099637 |
289 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1445849047 CA381261997 |
291 | Q>E | No |
ClinGen gnomAD |
|
|
CA381262017 rs1364556467 |
293 | F>L | No |
ClinGen gnomAD |
|
|
rs201108435 CA6099642 |
299 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200461019 CA6099643 |
299 | K>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs373266891 CA6099645 |
300 | S>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373266891 CA6099644 |
300 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 302 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1243859614 CA381262081 |
303 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs939624841 CA224001135 |
305 | P>L | No |
ClinGen Ensembl |
|
|
CA381262097 rs1565072289 |
305 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| TCGA novel | 306 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381262102 rs1314713271 |
306 | E>K | No |
ClinGen gnomAD |
|
|
CA381262109 rs1351636093 |
307 | D>H | No |
ClinGen gnomAD |
|
|
CA381262113 rs1224180288 |
307 | D>V | No |
ClinGen gnomAD |
|
| TCGA novel | 308 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381262116 rs1367132995 |
308 | F>L | No |
ClinGen TOPMed |
|
|
rs377174877 CA6099647 |
308 | F>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6099649 rs200624740 |
310 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs370521030 CA6099648 |
310 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA6099650 rs762204730 |
311 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1462311122 CA381262142 |
312 | K>E | No |
ClinGen gnomAD |
|
|
CA381262168 rs1367570405 |
316 | Q>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA224001157 rs941492275 |
319 | T>I | No |
ClinGen TOPMed |
|
|
CA6099653 rs367743932 |
320 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1338032066 CA381262202 |
322 | E>K | No |
ClinGen gnomAD |
|
|
rs1450597603 CA381262218 |
324 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA6099656 rs755179371 |
325 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA6099657 rs371177254 |
326 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs998272140 CA224001179 |
327 | G>E | No |
ClinGen TOPMed |
|
|
CA6099658 rs752909696 |
327 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1263751189 CA381262249 |
329 | V>A | No |
ClinGen gnomAD |
|
|
CA6099660 rs201604417 COSM270115 |
329 | V>I | Variant assessed as Somatic; 0.0002356 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs745845011 CA6099661 |
330 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs779449173 CA6099663 |
331 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs201989796 CA381262264 |
332 | T>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6099665 rs201989796 |
332 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1472509092 CA381262274 |
334 | L>F | No |
ClinGen gnomAD |
|
|
CA381262285 rs1177566506 |
335 | F>L | No |
ClinGen gnomAD |
|
|
rs761546507 CA6099667 |
336 | K>N | No |
ClinGen ExAC |
|
|
CA224001389 rs750179257 |
337 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA6099678 rs750179257 |
337 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs779972377 CA6099680 |
339 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA6099682 rs372432278 |
341 | L>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs778547958 CA6099683 |
342 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs771810546 CA6099685 |
343 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1229043079 CA381262346 |
344 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs747342684 CA6099688 |
349 | K>M | No |
ClinGen ExAC gnomAD |
|
|
rs771347567 CA6099689 |
349 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1489978449 CA381262400 |
351 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 352 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6099691 rs759935935 |
353 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1191599435 CA381262433 |
356 | K>R | No |
ClinGen gnomAD |
|
|
rs1360286465 CA381262452 |
358 | F>L | No |
ClinGen TOPMed |
|
|
rs775506650 CA6099693 |
359 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381262454 rs775506650 |
359 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381262471 rs1445239525 |
362 | D>Y | No |
ClinGen gnomAD |
|
|
CA6099695 rs374680296 |
363 | R>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
rs371744623 CA6099694 |
363 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA381262492 rs1451634124 |
365 | M>T | No |
ClinGen TOPMed |
|
|
CA381262489 rs1169390051 |
365 | M>V | No |
ClinGen TOPMed |
|
|
CA6099698 rs766077898 |
366 | R>C | Variant assessed as Somatic; 4.648e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA6099699 rs764376000 |
366 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224001407 COSM252801 rs912702321 |
368 | R>C | ovary [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
RCV000895312 rs187644314 COSM1581631 CA6099701 COSM1581632 |
368 | R>H | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs187644314 CA6099702 |
368 | R>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1316795319 CA381262513 |
369 | L>F | No |
ClinGen gnomAD |
|
|
CA381262524 rs1228679845 |
371 | Q>* | No |
ClinGen TOPMed |
|
|
rs771374379 CA6099706 |
371 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs1343915464 CA381262526 |
371 | Q>R | No |
ClinGen TOPMed |
|
|
rs776829093 CA381262535 |
372 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA6099721 rs373503438 |
373 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs758050693 CA6099722 |
379 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758050693 CA381262598 |
379 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs202127335 CA224001718 |
380 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs556283654 CA6099723 |
381 | D>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1478772159 CA381262614 |
382 | E>K | No |
ClinGen gnomAD |
|
|
CA6099725 rs376766269 |
384 | T>P | No |
ClinGen ESP ExAC |
|
| TCGA novel | 385 | V>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 388 | Q>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1470274290 CA381262663 |
389 | I>F | No |
ClinGen gnomAD |
|
|
rs200614035 CA381262682 |
392 | H>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6099727 rs200614035 |
392 | H>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200614035 CA6099726 |
392 | H>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs747911305 CA6099729 |
393 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6099732 rs774267148 |
394 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1605013 CA6099731 COSM1605014 rs768775062 |
394 | V>I | liver [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA224001754 rs932903552 |
395 | H>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1418439202 CA381262728 |
399 | D>V | No |
ClinGen TOPMed |
|
|
rs752729887 CA6099738 |
401 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765121062 CA6099737 |
401 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA6099739 rs762950864 |
402 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1249634250 CA381262753 |
403 | A>V | No |
ClinGen TOPMed |
|
|
CA381262758 rs1590734398 |
404 | I>T | No |
ClinGen Ensembl |
|
|
CA224001785 rs768088214 |
405 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs538419986 CA224001784 |
405 | R>W | No |
ClinGen 1000Genomes gnomAD |
|
|
COSM1224995 CA6099740 rs763690516 |
408 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA381262784 rs763690516 |
408 | T>R | No |
ClinGen ExAC gnomAD |
|
|
CA381262810 rs1445427151 |
411 | S>T | No |
ClinGen TOPMed |
|
|
CA224003775 rs199655994 |
411 | S>Y | No |
ClinGen 1000Genomes |
|
|
CA6099764 rs755734478 |
412 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381262815 rs755734478 |
412 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754157202 CA6099766 |
417 | P>S | No |
ClinGen ExAC |
|
|
CA381262851 rs1291075842 |
418 | K>E | No |
ClinGen gnomAD |
|
|
CA381262871 rs1227740483 |
421 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA6099768 rs779221847 |
422 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA381262888 rs1226777059 |
423 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs957135838 CA224003808 |
425 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
COSM1224996 CA224003819 rs570043048 |
429 | M>I | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes |
|
rs1463213205 CA381262929 |
429 | M>T | No |
ClinGen gnomAD |
|
|
rs370246020 CA381262955 |
432 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs771227874 CA381262965 |
434 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381262964 rs771227874 |
434 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771227874 CA6099773 |
434 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1207232282 CA381262963 |
434 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs867264692 CA224003828 |
436 | Q>* | No |
ClinGen gnomAD |
|
| TCGA novel | 436 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 437 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381262990 rs1401587273 |
438 | K>N | No |
ClinGen gnomAD |
|
|
CA381262989 rs1413530972 |
438 | K>R | No |
ClinGen gnomAD |
|
|
rs1161983958 CA381262992 |
439 | D>N | No |
ClinGen gnomAD |
|
|
rs1565076448 CA381263013 |
441 | Q>L | No |
ClinGen Ensembl |
|
|
rs768489530 CA6099776 |
443 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs774210078 CA6099777 |
444 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs770464210 CA6099778 |
445 | R>C | No |
ClinGen ExAC TOPMed |
|
|
rs377689356 CA6099779 |
445 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs377689356 CA6099780 |
445 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377689356 CA6099781 |
445 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs754206470 CA6099784 |
447 | N>T | No |
ClinGen ExAC TOPMed |
|
|
rs538642382 CA6099787 |
449 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA381263080 rs1263253228 |
453 | G>S | No |
ClinGen gnomAD |
|
|
CA381263101 rs1443574517 |
456 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA6099790 rs778020511 |
457 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA6099791 rs747026975 |
458 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1565076587 CA381263124 |
459 | L>R | No |
ClinGen Ensembl |
|
|
rs1565077237 CA381263158 |
463 | T>A | No |
ClinGen Ensembl |
|
|
CA6099814 rs778596138 |
463 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA381263160 rs1565077237 |
463 | T>P | No |
ClinGen Ensembl |
|
|
CA381263165 rs1286450999 |
464 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1037596595 CA224004476 |
465 | H>L | No |
ClinGen Ensembl |
|
|
CA381263176 rs1434118537 |
465 | H>Q | No |
ClinGen TOPMed |
|
|
CA381263200 rs1339400003 |
469 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1339400003 CA381263198 |
469 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
rs950264973 CA224004477 |
469 | T>P | No |
ClinGen Ensembl |
|
|
CA381263229 rs983051027 |
474 | R>* | No |
ClinGen gnomAD |
|
|
CA224004494 rs983051027 |
474 | R>G | No |
ClinGen gnomAD |
|
|
CA6099815 rs747920059 |
474 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381263244 rs1223646466 |
477 | R>G | No |
ClinGen gnomAD |
|
|
rs772002757 CA6099816 |
477 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554969925 CA381263252 |
478 | D>A | No |
ClinGen Ensembl |
|
|
rs993369239 CA224004536 |
478 | D>Y | No |
ClinGen TOPMed |
|
|
CA6099819 VAR_041364 rs55977709 |
479 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen UniProt 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA224004554 rs954810108 |
481 | A>T | No |
ClinGen gnomAD |
|
|
rs1216607637 CA381263274 |
481 | A>V | No |
ClinGen TOPMed |
|
|
rs766470635 CA6099823 |
482 | P>L | No |
ClinGen ExAC TOPMed |
|
|
CA381263285 rs1293871845 |
483 | S>F | No |
ClinGen gnomAD |
|
|
rs976805310 CA224004585 |
484 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
COSM2149011 rs1399523797 CA381263287 COSM2149010 |
484 | R>W | Variant assessed as Somatic; impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA381263294 rs1590740617 |
485 | V>G | No |
ClinGen Ensembl |
|
|
rs371321661 CA6099825 |
485 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381263298 rs1322750590 |
486 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs752159918 CA6099827 |
490 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1465432935 CA381263345 |
494 | T>A | No |
ClinGen TOPMed |
|
| VAR_041365 | 495 | H>Y | a metastatic melanoma sample; somatic mutation [UniProt] | No | UniProt |
|
rs767734317 CA381263364 CA381263363 |
496 | N>K | No |
ClinGen ExAC |
|
|
rs1340993840 CA381263361 |
496 | N>S | No |
ClinGen gnomAD |
|
|
rs78069132 CA224004617 |
500 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA6099832 rs78069132 |
500 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA381263401 rs1263027441 |
502 | D>N | No |
ClinGen gnomAD |
|
|
rs374754187 CA381263408 |
503 | C>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| rs864309665 | 504 | A>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381263417 rs1247693189 |
504 | A>T | No |
ClinGen gnomAD |
|
|
CA224004653 rs985893277 |
504 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs758252252 CA6099835 |
505 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA6099836 rs746440945 |
505 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1456190199 CA381263442 |
508 | L>M | No |
ClinGen gnomAD |
|
|
rs1162663444 CA381263451 |
509 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1389255232 CA381263458 |
511 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
CA381263465 rs947345785 |
512 | C>G | No |
ClinGen TOPMed gnomAD |
|
|
rs947345785 CA224004658 |
512 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1042955209 CA224004660 |
512 | C>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1590740896 CA381263473 |
513 | G>A | No |
ClinGen Ensembl |
|
|
rs770817615 CA381263471 |
513 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770817615 CA6099838 |
513 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1314358500 CA381263482 |
515 | T>A | No |
ClinGen gnomAD |
|
|
CA6099839 rs372352176 |
515 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1338171174 CA381263511 |
519 | E>A | No |
ClinGen TOPMed |
|
|
CA6099840 rs745306335 CA381263512 |
519 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA381263506 rs1269360144 |
519 | E>K | No |
ClinGen gnomAD |
|
|
rs1311321373 CA381263517 |
520 | K>R | No |
ClinGen TOPMed |
|
|
CA224004721 rs978266480 |
522 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA224004723 rs879895102 |
523 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
COSM930417 COSM1585916 rs201987433 CA6099842 |
523 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA6099844 rs769181430 |
524 | D>A | No |
ClinGen ExAC gnomAD |
|
|
CA6099843 rs374245393 |
524 | D>H | No |
ClinGen ESP ExAC TOPMed |
|
|
CA381263565 rs374509053 |
526 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374509053 CA6099861 |
526 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV000976175 CA6099864 rs553035759 |
531 | R>Q | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA6099863 rs748978822 |
531 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381263601 rs1229431510 |
532 | S>N | No |
ClinGen gnomAD |
|
|
rs774871756 CA6099865 |
532 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA381263598 rs1311613729 |
532 | S>R | No |
ClinGen gnomAD |
|
|
CA224004861 rs888118452 |
539 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs888118452 CA224004862 |
539 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs377549319 CA6099866 COSM194235 |
541 | S>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA224004863 rs897306635 |
542 | E>D | No |
ClinGen TOPMed |
|
|
rs572796072 CA6099868 |
544 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1391600183 CA381263683 |
545 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA381263685 rs1428276997 |
545 | T>N | No |
ClinGen gnomAD |
|
|
rs1292235825 CA381263709 |
549 | E>K | No |
ClinGen gnomAD |
|
|
CA381263719 rs1183630197 |
550 | V>E | No |
ClinGen TOPMed |
|
|
CA381263722 rs1367070640 |
551 | E>K | No |
ClinGen gnomAD |
|
|
CA381263723 rs1367070640 |
551 | E>Q | No |
ClinGen gnomAD |
|
|
rs1237694356 CA381263747 |
552 | K>R | No |
ClinGen gnomAD |
|
|
rs1473999703 CA381263750 |
553 | D>N | No |
ClinGen gnomAD |
|
|
rs948473410 CA224005181 |
555 | H>R | No |
ClinGen Ensembl |
|
|
rs753824587 CA6099901 |
555 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA381263770 rs1405291179 |
556 | A>T | No |
ClinGen TOPMed |
|
|
CA6099902 rs754594315 |
556 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA381263775 rs1161916664 |
557 | A>T | No |
ClinGen gnomAD |
|
| TCGA novel | 560 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1306508826 CA381263811 |
562 | M>R | No |
ClinGen gnomAD |
|
|
rs1306508826 CA381263810 |
562 | M>T | No |
ClinGen gnomAD |
|
|
CA224005186 rs367798590 |
562 | M>V | No |
ClinGen ESP gnomAD |
|
|
CA381263827 rs1176836527 |
565 | A>T | No |
ClinGen TOPMed |
|
|
CA6099904 rs752438867 |
566 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6099905 COSM1585936 rs752438867 COSM930418 |
566 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs778226223 CA6099906 |
568 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs771319241 CA6099908 |
570 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA381263862 rs1590742391 |
570 | A>V | No |
ClinGen Ensembl |
|
|
rs781704923 CA6099909 |
571 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1326552855 CA381263875 |
572 | W>* | No |
ClinGen gnomAD |
|
|
rs1278952127 CA381263885 |
574 | V>M | No |
ClinGen gnomAD |
|
|
rs769901675 CA6099911 |
575 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA381263895 rs1207532418 |
576 | G>R | No |
ClinGen gnomAD |
|
|
rs1590742471 CA381263906 |
577 | V>G | No |
ClinGen Ensembl |
|
|
CA381263926 rs1203019467 |
581 | T>A | No |
ClinGen gnomAD |
|
|
CA381263929 rs1483553321 |
581 | T>I | No |
ClinGen gnomAD |
|
|
rs1203019467 CA381263925 |
581 | T>P | No |
ClinGen gnomAD |
|
|
rs773065526 CA6099915 |
582 | S>Y | No |
ClinGen ExAC |
|
|
CA6099916 rs760456789 |
583 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1442312773 CA381263941 |
583 | K>R | No |
ClinGen TOPMed |
|
|
CA6099917 rs766264413 |
584 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA381263956 rs1427307643 |
586 | R>C | No |
ClinGen gnomAD |
|
|
CA381263957 rs1412986220 |
586 | R>H | No |
ClinGen gnomAD |
|
|
CA6099920 rs754563539 |
587 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1590742662 CA381263969 |
588 | H>P | No |
ClinGen Ensembl |
|
|
rs372230902 CA6099922 |
588 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381263976 rs1348528155 |
589 | P>R | No |
ClinGen gnomAD |
|
|
rs751208419 CA6099924 |
591 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA6099926 rs781502358 |
594 | T>K | No |
ClinGen ExAC gnomAD |
|
|
CA381264007 rs1483623385 |
595 | E>K | No |
ClinGen gnomAD |
|
|
CA381264019 rs1341531841 |
596 | T>I | No |
ClinGen TOPMed |
|
|
rs777902864 CA6099927 |
599 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6099928 rs770236935 |
600 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1590742772 CA381264052 |
601 | R>S | No |
ClinGen Ensembl |
|
|
rs752403987 CA6099929 |
603 | T>M | Variant assessed as Somatic; 9.448e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA381264065 rs1248546004 |
604 | P>T | No |
ClinGen gnomAD |
|
|
rs755062750 CA6099952 |
606 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779021365 CA6099954 |
609 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs934195039 CA224005532 |
609 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA6099956 rs772375831 |
610 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6099955 rs200031106 |
610 | P>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1267808335 CA381264117 |
611 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 613 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 613 | T>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs756664937 CA381264125 |
613 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756664937 CA6099957 |
613 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1565079212 CA381264130 |
614 | P>T | No |
ClinGen Ensembl |
|
|
rs1207123788 CA381264139 |
615 | V>F | No |
ClinGen gnomAD |
|
|
rs769695050 CA6099960 |
616 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1214475509 CA381264148 |
617 | A>T | No |
ClinGen TOPMed |
|
|
CA381264167 rs1369941506 |
619 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1187971247 CA381264165 |
619 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 620 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs762912713 CA6099962 |
622 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs554915845 CA6099963 |
623 | G>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 624 | H>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381264204 rs1458357965 |
624 | H>R | No |
ClinGen gnomAD |
|
|
CA224005559 rs928926221 |
624 | H>Y | No |
ClinGen Ensembl |
|
|
CA381264208 rs1286801242 |
625 | W>R | No |
ClinGen gnomAD |
|
|
CA6099964 rs773861156 |
626 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs202155473 RCV000954963 CA6099965 |
627 | T>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA6099967 rs750071669 |
629 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381264254 rs1345674551 |
630 | E>D | No |
ClinGen TOPMed |
|
|
CA6099968 rs756530092 |
630 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1284821695 CA381264259 |
631 | D>A | No |
ClinGen TOPMed |
|
|
CA224005590 rs911834141 |
631 | D>E | No |
ClinGen TOPMed |
|
|
rs754342565 CA6099970 |
635 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs755472981 CA6099971 |
635 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA381264296 rs1260410824 |
636 | E>K | No |
ClinGen gnomAD |
|
|
rs868281530 CA224005618 |
637 | D>E | No |
ClinGen TOPMed |
|
|
CA224005610 rs768787548 |
637 | D>N | No |
ClinGen Ensembl |
|
|
rs1380235803 CA381264314 |
638 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1258027151 CA381264325 |
639 | S>N | No |
ClinGen gnomAD |
|
| TCGA novel | 639 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381264330 rs1484560904 |
640 | T>A | No |
ClinGen gnomAD |
|
|
CA381264334 rs1357962172 |
640 | T>I | No |
ClinGen TOPMed |
|
|
rs543864282 CA6099974 |
643 | R>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6099975 rs778210713 |
644 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA6099978 rs775310881 |
646 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1427957262 CA381264377 |
646 | D>V | No |
ClinGen TOPMed |
|
|
rs368944476 CA6099979 |
647 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA381264393 rs1590744778 |
648 | D>V | No |
ClinGen Ensembl |
|
|
CA381264398 rs1414545697 |
649 | W>R | No |
ClinGen gnomAD |
|
|
rs2845563 CA6099981 |
651 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381264420 rs1222515595 |
652 | L>V | No |
ClinGen gnomAD |
|
|
CA6099995 rs373178890 |
654 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381264454 rs1488543395 |
655 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 656 | A>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA224006215 rs898779702 |
656 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs867368865 CA224006227 |
657 | E>* | No |
ClinGen Ensembl |
|
|
CA381264497 rs1408570262 |
662 | Q>* | No |
ClinGen gnomAD |
|
|
CA6099996 rs757448224 |
662 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
RCV000880118 CA6099997 rs56076708 VAR_041366 |
663 | Q>H | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA224006228 rs866497836 |
663 | Q>K | No |
ClinGen Ensembl |
|
|
rs1350955300 CA381264505 |
663 | Q>R | No |
ClinGen gnomAD |
|
|
rs768330341 CA381264514 |
664 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778879281 CA6100000 |
665 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381264529 rs1436099680 |
666 | W>* | No |
ClinGen gnomAD |
|
|
rs1300073968 CA381264533 |
667 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
rs748057840 CA381264536 |
667 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748057840 CA6100001 |
667 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1212552571 CA381264543 |
668 | T>I | No |
ClinGen gnomAD |
|
|
rs1212552571 CA381264542 |
668 | T>N | No |
ClinGen gnomAD |
|
| TCGA novel | 668 | T>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1215442542 CA381264546 |
669 | G>E | No |
ClinGen gnomAD |
|
|
rs371045520 CA6100003 CA6100004 |
669 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371045520 CA381264545 |
669 | G>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1197315402 CA381264552 |
670 | G>A | No |
ClinGen gnomAD |
|
| TCGA novel | 670 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381264559 rs1467630441 |
671 | Q>R | No |
ClinGen gnomAD |
|
|
rs776868320 CA6100006 |
674 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs200493885 CA6100007 |
674 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA381264581 rs1474660461 |
675 | A>T | No |
ClinGen gnomAD |
|
|
CA224006263 rs1018737160 |
677 | Q>L | No |
ClinGen Ensembl |
|
|
CA6100040 rs756844612 |
682 | D>G | No |
ClinGen ExAC gnomAD |
|
|
RCV000880670 CA6100038 rs199946104 |
682 | D>N | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs199946104 CA6100039 |
682 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1410479886 CA381264669 |
686 | S>P | No |
ClinGen gnomAD |
|
|
CA6100042 rs898442618 |
688 | S>P | No |
ClinGen TOPMed |
|
|
rs1330803184 CA381264691 |
689 | P>L | No |
ClinGen gnomAD |
|
|
CA6100044 rs1554970718 |
689 | P>S | No |
ClinGen Ensembl |
|
|
CA381264699 COSM115764 rs1216226387 |
690 | E>G | ovary [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA381264696 rs1440788043 |
690 | E>Q | No |
ClinGen gnomAD |
|
|
CA381264708 rs1372749573 |
691 | S>F | No |
ClinGen gnomAD |
|
|
rs775998594 CA6100048 |
692 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1260832875 CA381264720 |
693 | W>R | No |
ClinGen TOPMed |
|
|
CA381264741 rs1343243868 |
695 | S>N | No |
ClinGen gnomAD |
|
|
rs1198140772 CA381264750 |
696 | W>* | No |
ClinGen gnomAD |
|
|
rs749735335 CA6100049 |
698 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs879198579 CA224006440 |
700 | G>S | No |
ClinGen Ensembl |
|
|
CA6100050 rs769127882 |
703 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs769127882 CA224006449 |
703 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA381264817 rs1193182147 |
704 | Q>* | No |
ClinGen gnomAD |
|
|
CA381264824 rs993992884 |
705 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
rs993992884 CA224006451 |
705 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1475614261 CA381264828 |
705 | G>V | No |
ClinGen gnomAD |
|
|
CA381264843 rs1394217135 |
707 | Q>* | No |
ClinGen gnomAD |
|
|
rs370180815 CA6100052 |
710 | S>R | No |
ClinGen ESP ExAC gnomAD |
|
|
CA6100053 rs767667165 |
712 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs374521201 CA224006458 |
713 | E>Q | No |
ClinGen ESP TOPMed |
|
|
COSM1355945 CA224006465 COSM1355944 rs981212419 |
714 | P>L | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA6100055 rs760901275 |
714 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1268738941 CA381264906 |
715 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs758250704 CA6100059 |
717 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6100060 rs201172030 |
718 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1248843992 CA381264947 |
720 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA6100062 rs201119677 RCV000974468 |
720 | R>W | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA381264972 rs1195083208 |
723 | S>N | No |
ClinGen gnomAD |
|
|
rs931557969 CA224006499 |
724 | E>G | No |
ClinGen Ensembl |
|
|
CA381264989 rs1406380598 |
725 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA381264986 rs1466071693 |
725 | Y>H | No |
ClinGen TOPMed |
|
|
rs1590748933 CA381265001 |
726 | N>K | No |
ClinGen Ensembl |
|
|
rs1165486045 CA381264998 |
726 | N>S | No |
ClinGen gnomAD |
|
|
CA381265009 TCGA novel rs779908670 |
727 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC gnomAD NCI-TCGA |
|
CA6100065 rs779908670 |
727 | W>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 727 | W>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381265007 rs1202832444 |
727 | W>S | No |
ClinGen TOPMed |
|
|
rs748925905 CA6100066 |
728 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs748925905 CA6100067 |
728 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA381265018 rs1324860630 |
729 | G>S | No |
ClinGen gnomAD |
|
|
rs748711760 CA6100069 |
730 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA381265055 rs1326159531 |
733 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs202171988 CA6100071 |
734 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs760815022 CA6100072 |
735 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA381265081 rs1232724545 |
736 | G>D | No |
ClinGen gnomAD |
|
|
CA381265076 rs1590749112 |
736 | G>S | No |
ClinGen Ensembl |
|
|
rs1554970836 CA6100074 |
737 | D>A | No |
ClinGen Ensembl |
|
|
rs944213047 CA224006565 |
737 | D>N | No |
ClinGen Ensembl |
|
|
rs759727682 CA381265106 |
739 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381265110 rs1371934941 |
740 | A>D | No |
ClinGen gnomAD |
|
|
rs1259414618 CA381265107 |
740 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1446199396 CA381265121 |
741 | T>I | No |
ClinGen gnomAD |
|
|
CA6100079 rs751251610 |
743 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA6100078 rs763967755 |
743 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1163619216 CA381265145 |
744 | A>V | No |
ClinGen gnomAD |
|
|
rs866122670 CA224006584 |
745 | R>C | No |
ClinGen gnomAD |
|
|
CA381265153 rs1455034490 |
745 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1156430811 CA381265157 |
746 | P>T | No |
ClinGen gnomAD |
|
|
CA381265168 rs1415743697 |
747 | S>N | No |
ClinGen gnomAD |
|
|
CA381265174 rs1590749375 |
748 | T>P | No |
ClinGen Ensembl |
|
|
rs774713360 CA224006608 |
749 | Q>* | No |
ClinGen gnomAD |
|
|
CA224006699 rs926717873 |
750 | P>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1251783952 CA381265222 |
752 | P>L | No |
ClinGen gnomAD |
|
|
CA6100098 rs775772873 |
752 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1481354373 CA381265230 |
753 | D>G | No |
ClinGen gnomAD |
|
|
CA381265240 rs1193600398 |
754 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs11548537 CA224006705 |
755 | W>* | No |
ClinGen Ensembl |
|
|
VAR_041367 rs56077405 CA6100099 |
755 | W>S | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs1231691667 CA381265251 |
756 | G>S | No |
ClinGen gnomAD |
|
|
rs1171780502 CA381265273 |
758 | D>E | No |
ClinGen gnomAD |
|
|
rs1356765146 CA381265291 |
760 | W>* | No |
ClinGen gnomAD |
|
|
CA381265294 rs1369929176 |
761 | E>K | No |
ClinGen TOPMed |
|
|
rs1297684278 CA381265321 |
764 | E>K | No |
ClinGen gnomAD |
|
|
CA381265340 rs1385077846 |
766 | D>H | No |
ClinGen gnomAD |
|
|
CA679344383 rs1179432312 |
767 | S>* | No |
ClinGen TOPMed |
|
|
CA381265356 rs1443152869 |
767 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA381265348 rs1443453553 |
767 | S>R | No |
ClinGen gnomAD |
|
|
CA381265358 rs1301516986 |
768 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1356036646 CA381265428 |
768 | R>Q | No |
ClinGen gnomAD |
|
|
CA6100115 rs769900982 |
770 | V>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1450143944 CA381265461 |
772 | A>T | No |
ClinGen gnomAD |
|
|
rs899960373 CA224006811 |
772 | A>V | No |
ClinGen TOPMed |
|
|
rs1224057842 CA381265478 |
774 | L>V | No |
ClinGen gnomAD |
|
|
CA381265487 rs1216367450 |
775 | A>G | No |
ClinGen gnomAD |
|
|
rs573462705 CA224006823 |
775 | A>P | No |
ClinGen 1000Genomes gnomAD |
|
|
rs573462705 CA381265484 |
775 | A>T | No |
ClinGen 1000Genomes gnomAD |
|
|
rs370701660 CA6100118 |
776 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs749493894 CA6100117 |
776 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224006829 rs556081911 |
777 | K>R | No |
ClinGen 1000Genomes |
|
|
CA6100119 COSM1581634 rs773092805 COSM1581633 |
779 | R>C | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1470552761 CA381265517 |
779 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs575977540 CA381265523 |
780 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs575977540 CA6100120 |
780 | E>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA381265527 rs1406037810 |
780 | E>V | No |
ClinGen gnomAD |
|
|
CA6100121 rs766354334 |
782 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381265542 rs1419276561 |
782 | R>W | No |
ClinGen gnomAD |
|
|
CA381265551 rs1375772475 |
783 | R>L | No |
ClinGen gnomAD |
|
|
rs1050154207 CA224006863 |
784 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs759029574 CA6100123 |
784 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224006869 rs200041750 |
785 | E>G | No |
ClinGen TOPMed |
|
|
CA224006865 rs899628558 |
785 | E>K | No |
ClinGen TOPMed |
|
|
CA6100125 rs200704028 |
786 | M>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1238886246 CA381265583 |
788 | A>T | No |
ClinGen gnomAD |
|
|
rs764451963 CA6100127 |
789 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1209439165 CA381265602 |
790 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs757610725 CA381265609 |
791 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6100129 rs757610725 |
791 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381265612 rs1206742980 |
791 | A>V | No |
ClinGen gnomAD |
|
|
rs1231208652 CA381265615 |
792 | E>K | No |
ClinGen gnomAD |
|
|
rs1460991558 CA381265627 |
793 | R>K | No |
ClinGen TOPMed |
|
|
rs1395528046 CA381265632 |
793 | R>S | No |
ClinGen gnomAD |
|
|
rs1194490296 CA381265626 |
793 | R>W | No |
ClinGen gnomAD |
|
|
rs1170796310 CA381265646 |
795 | V>G | No |
ClinGen gnomAD |
|
|
rs1397432651 CA381265668 |
798 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1330310896 CA381265665 |
798 | G>S | No |
ClinGen gnomAD |
|
|
rs1397432651 CA381265670 |
798 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1025230766 CA224006947 |
800 | M>I | No |
ClinGen Ensembl |
|
| TCGA novel | 800 | M>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6100136 rs768942150 |
800 | M>V | No |
ClinGen ExAC gnomAD |
|
|
COSM1188302 CA381265705 rs1232524950 |
803 | G>A | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs773146247 CA6100137 |
804 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA381265712 rs1216769195 |
805 | R>G | No |
ClinGen gnomAD |
|
|
rs746869284 CA224006948 |
805 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746869284 CA6100138 |
805 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381265713 rs1216769195 |
805 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA6100140 rs61893784 |
808 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224006965 rs61893784 |
808 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6100139 rs770837602 |
808 | D>N | No |
ClinGen ExAC gnomAD |
1 associated diseases with Q96KG9
[MIM: 616719]: Spinocerebellar ataxia, autosomal recessive, 21 (SCAR21)
A form of spinocerebellar ataxia, a clinically and genetically heterogeneous group of cerebellar disorders due to degeneration of the cerebellum with variable involvement of the brainstem and spinal cord. SCAR21 is characterized by cerebellar atrophy and ataxia with onset in early childhood. Patients also manifest recurrent episodes of liver failure, hepatic fibrosis and a peripheral neuropathy. {ECO:0000269|PubMed:26581903}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A form of spinocerebellar ataxia, a clinically and genetically heterogeneous group of cerebellar disorders due to degeneration of the cerebellum with variable involvement of the brainstem and spinal cord. SCAR21 is characterized by cerebellar atrophy and ataxia with onset in early childhood. Patients also manifest recurrent episodes of liver failure, hepatic fibrosis and a peripheral neuropathy. {ECO:0000269|PubMed:26581903}. Note=The disease is caused by variants affecting the gene represented in this entry.
1 regional properties for Q96KG9
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Protein kinase domain | 14 - 314 | IPR000719 |
Functions
9 GO annotations of cellular component
| Name | Definition |
|---|---|
| cis-Golgi network | The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum. |
| COPI vesicle coat | One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| endoplasmic reticulum-Golgi intermediate compartment | A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi and Golgi-to-ER transport. |
| Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| microtubule organizing center | An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| cadherin binding | Binding to cadherin, a type I membrane protein involved in cell adhesion. |
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| protein tyrosine kinase activity | Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate. |
5 GO annotations of biological process
| Name | Definition |
|---|---|
| inflammatory response | The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages. |
| neuron development | The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. |
| protein localization | Any process in which a protein is transported to, or maintained in, a specific location. |
| retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG. |
| spinal cord motor neuron differentiation | The process in which neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MWFFARDPVR | DFPFELIPEP | PEGGLPGPWA | LHRGRKKATG | SPVSIFVYDV | KPGAEEQTQV |
| 70 | 80 | 90 | 100 | 110 | 120 |
| AKAAFKRFKT | LRHPNILAYI | DGLETEKCLH | VVTEAVTPLG | IYLKARVEAG | GLKELEISWG |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LHQIVKALSF | LVNDCSLIHN | NVCMAAVFVD | RAGEWKLGGL | DYMYSAQGNG | GGPPRKGIPE |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LEQYDPPELA | DSSGRVVREK | WSADMWRLGC | LIWEVFNGPL | PRAAALRNPG | KIPKTLVPHY |
| 250 | 260 | 270 | 280 | 290 | 300 |
| CELVGANPKV | RPNPARFLQN | CRAPGGFMSN | RFVETNLFLE | EIQIKEPAEK | QKFFQELSKS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| LDAFPEDFCR | HKVLPQLLTA | FEFGNAGAVV | LTPLFKVGKF | LSAEEYQQKI | IPVVVKMFSS |
| 370 | 380 | 390 | 400 | 410 | 420 |
| TDRAMRIRLL | QQMEQFIQYL | DEPTVNTQIF | PHVVHGFLDT | NPAIREQTVK | SMLLLAPKLN |
| 430 | 440 | 450 | 460 | 470 | 480 |
| EANLNVELMK | HFARLQAKDE | QGPIRCNTTV | CLGKIGSYLS | ASTRHRVLTS | AFSRATRDPF |
| 490 | 500 | 510 | 520 | 530 | 540 |
| APSRVAGVLG | FAATHNLYSM | NDCAQKILPV | LCGLTVDPEK | SVRDQAFKAI | RSFLSKLESV |
| 550 | 560 | 570 | 580 | 590 | 600 |
| SEDPTQLEEV | EKDVHAASSP | GMGGAAASWA | GWAVTGVSSL | TSKLIRSHPT | TAPTETNIPQ |
| 610 | 620 | 630 | 640 | 650 | 660 |
| RPTPEGVPAP | APTPVPATPT | TSGHWETQEE | DKDTAEDSST | ADRWDDEDWG | SLEQEAESVL |
| 670 | 680 | 690 | 700 | 710 | 720 |
| AQQDDWSTGG | QVSRASQVSN | SDHKSSKSPE | SDWSSWEAEG | SWEQGWQEPS | SQEPPPDGTR |
| 730 | 740 | 750 | 760 | 770 | 780 |
| LASEYNWGGP | ESSDKGDPFA | TLSARPSTQP | RPDSWGEDNW | EGLETDSRQV | KAELARKKRE |
| 790 | 800 | ||||
| ERRREMEAKR | AERKVAKGPM | KLGARKLD |