Q96E29
Gene name |
MTERF3 (MTERFD1, CGI-12) |
Protein name |
Transcription termination factor 3, mitochondrial |
Names |
Mitochondrial transcription termination factor 3, mTERF3, mTERF domain-containing protein 1, mitochondrial |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:51001 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
2 structures for Q96E29
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 3M66 | X-ray | 160 A | A | 148-417 | PDB |
| AF-Q96E29-F1 | Predicted | AlphaFoldDB |
341 variants for Q96E29
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA4816428 rs757722051 |
2 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1461357984 CA371751202 |
4 | S>L | No |
ClinGen gnomAD |
|
|
rs754388063 CA4816426 |
5 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA4816425 rs780884393 |
6 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA4816423 rs142623533 |
8 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1005298643 CA181489554 |
9 | P>S | No |
ClinGen TOPMed |
|
|
CA371751125 rs1221434714 |
10 | R>T | No |
ClinGen gnomAD |
|
|
rs1179402176 CA371751108 |
11 | W>* | No |
ClinGen gnomAD |
|
|
rs1469704673 CA371751084 |
12 | F>L | No |
ClinGen gnomAD |
|
|
rs766159243 CA4816422 |
15 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs762597663 CA4816421 |
16 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA371751027 rs1368992688 |
17 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
rs750198255 CA4816420 |
19 | S>R | No |
ClinGen ExAC |
|
|
rs138131302 CA4816419 |
20 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs538287402 CA4816417 |
21 | I>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4816418 rs538287402 |
21 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs140943797 CA371750972 |
25 | Q>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs140943797 CA4816414 |
25 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA371750961 rs1440861175 |
27 | T>A | No |
ClinGen gnomAD |
|
|
CA4816412 rs746047936 |
29 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4816411 rs113965668 |
29 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1406603662 CA371750944 |
30 | F>L | No |
ClinGen gnomAD |
|
|
CA371750942 rs771292484 |
30 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4816410 rs771292484 |
30 | F>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749856275 CA4816409 |
31 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs749856275 CA371750935 |
31 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA4816408 rs151046309 |
32 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA371750910 rs1164977102 |
35 | R>S | No |
ClinGen TOPMed |
|
|
CA371750900 rs1243706949 |
37 | L>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs746520053 CA4816405 |
38 | L>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 39 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs148966759 CA4816404 |
40 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs148966759 CA4816403 |
40 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA371750847 rs1329656131 |
45 | P>R | No |
ClinGen TOPMed |
|
|
CA181489512 rs972284546 |
46 | Q>R | No |
ClinGen Ensembl |
|
| TCGA novel | 47 | I>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs764980914 CA4816401 |
47 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA371750832 rs1414910994 |
48 | S>P | No |
ClinGen gnomAD |
|
|
rs961822576 CA181489508 |
49 | S>Y | No |
ClinGen Ensembl |
|
|
CA4816399 rs114184492 |
51 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4816398 rs764051076 |
52 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371750797 rs1563553258 |
53 | F>V | No |
ClinGen Ensembl |
|
|
rs567088697 CA181489500 |
55 | Q>H | No |
ClinGen 1000Genomes |
|
|
CA4816396 rs372872715 |
57 | G>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4816397 rs372872715 |
57 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 59 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4816394 rs759713117 |
61 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA4816395 rs767626221 |
61 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371750737 rs1563553234 |
62 | R>G | No |
ClinGen Ensembl |
|
|
CA181489489 rs954002155 |
62 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA371750720 rs1586174089 |
64 | S>F | No |
ClinGen Ensembl |
|
|
CA4816392 rs771007852 |
65 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA371750713 rs1586174079 |
66 | L>V | No |
ClinGen Ensembl |
|
|
rs142588199 CA181489483 |
68 | N>D | No |
ClinGen ESP |
|
|
CA371750696 rs1421368202 |
68 | N>I | No |
ClinGen gnomAD |
|
|
CA4816390 rs773643175 |
73 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA371750645 rs1485483116 |
75 | S>L | No |
ClinGen gnomAD |
|
|
CA181489479 rs1000392704 |
76 | S>G | No |
ClinGen gnomAD |
|
|
TCGA novel CA371750630 rs1214480682 |
77 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen gnomAD |
| TCGA novel | 78 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4816389 rs770436697 |
81 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA371750592 rs1281219961 |
83 | A>P | No |
ClinGen gnomAD |
|
|
rs1210435367 CA371750587 |
83 | A>V | No |
ClinGen gnomAD |
|
|
rs1310873864 CA371750582 |
84 | Q>R | No |
ClinGen gnomAD |
|
|
rs150071336 CA4816387 |
86 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4816386 rs757894456 |
87 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs745557221 CA4816385 |
89 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4816383 rs756864841 |
91 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371750530 rs1423469284 |
92 | N>S | No |
ClinGen TOPMed |
|
|
CA4816382 rs753638017 |
93 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA371750505 rs1311949862 |
96 | Q>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA371750504 rs1311949862 |
96 | Q>E | No |
ClinGen gnomAD |
|
|
CA371750503 rs1311949862 |
96 | Q>K | No |
ClinGen gnomAD |
|
|
rs763821962 CA4816381 |
96 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA181489463 rs756380685 |
98 | T>S | No |
ClinGen Ensembl |
|
|
rs756106575 CA4816380 |
99 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs533548805 CA4816379 |
100 | N>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA371750471 rs1402775032 |
101 | I>L | No |
ClinGen TOPMed |
|
|
rs767538840 CA4816378 |
101 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA4816377 rs759679822 |
102 | S>A | No |
ClinGen ExAC |
|
|
CA371750462 rs1417228995 |
102 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA371750443 rs1191600219 |
105 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA371750442 rs1191600219 |
105 | D>Y | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 109 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4816375 rs766624978 |
109 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs200509858 CA181489455 |
109 | F>Y | No |
ClinGen Ensembl |
|
|
CA4816374 rs763207796 |
111 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1236704425 CA371750321 |
114 | D>N | No |
ClinGen gnomAD |
|
|
rs75477527 CA4816359 |
118 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA371750245 rs1472298852 |
119 | L>F | No |
ClinGen TOPMed |
|
|
CA371750241 rs1448888380 |
120 | S>P | No |
ClinGen gnomAD |
|
|
CA4816357 rs144681415 |
122 | M>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4816356 COSM1187584 rs763333673 |
125 | I>V | lung [Cosmic] | No |
ClinGen cosmic curated ExAC |
|
rs376719625 CA4816353 |
132 | Q>H | No |
ClinGen ESP ExAC gnomAD |
|
|
CA371750073 rs1316103523 |
132 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs201969952 CA4816352 |
133 | I>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4816351 rs761032644 |
135 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs1432968546 CA371750001 |
135 | A>P | No |
ClinGen TOPMed |
|
|
CA371749999 rs1432968546 |
135 | A>S | No |
ClinGen TOPMed |
|
|
CA4816350 rs761032644 |
135 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA371749986 rs1586173263 |
136 | D>A | No |
ClinGen Ensembl |
|
|
rs1412427612 CA371749972 |
137 | P>R | No |
ClinGen gnomAD |
|
|
CA181489183 rs773973185 |
137 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs773973185 CA4816349 |
137 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1164030688 CA371749968 |
138 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1164030688 CA371749970 |
138 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs748983979 CA4816347 |
141 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA4816345 rs769392554 |
144 | F>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769392554 CA371749896 |
144 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4816344 rs747976035 |
146 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs145305126 COSM126813 CA4816343 |
147 | R>* | upper_aerodigestive_tract large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs145305126 CA4816342 |
147 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs751445991 CA4816341 |
147 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1260781480 CA371749829 |
149 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
rs758529559 CA4816339 |
150 | V>M | No |
ClinGen ExAC |
|
|
rs1184894202 CA371749763 |
153 | S>C | No |
ClinGen TOPMed |
|
|
rs199811648 CA181489157 |
155 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs199811648 CA4816338 |
155 | T>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs765589238 CA4816337 |
156 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA4816335 rs145985404 |
157 | Q>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs764355477 CA4816334 |
157 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764355477 CA4816333 |
157 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4816332 rs761314466 |
158 | K>* | No |
ClinGen ExAC gnomAD |
|
|
rs775948154 CA4816331 |
158 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1289478604 CA371749691 |
159 | L>F | No |
ClinGen gnomAD |
|
|
CA371749688 rs1419348608 |
160 | V>I | No |
ClinGen gnomAD |
|
|
rs1411861939 CA371749675 |
161 | L>F | No |
ClinGen TOPMed |
|
|
rs200757367 CA4816330 |
162 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 163 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4816311 rs759991185 |
164 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs549182133 CA371749333 |
164 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs549182133 CA181487888 |
164 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA371749327 rs1284702355 |
165 | D>Y | No |
ClinGen Ensembl |
|
|
rs772760384 CA181487884 |
167 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772760384 CA4816310 |
167 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764623303 CA4816309 |
168 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA371749299 rs761594515 |
169 | I>R | No |
ClinGen ExAC gnomAD |
|
|
CA4816308 rs761594515 |
169 | I>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs370070651 CA181487875 |
170 | E>Q | No |
ClinGen Ensembl |
|
|
CA371749289 rs1425286261 |
171 | K>E | No |
ClinGen TOPMed |
|
| TCGA novel | 173 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371749256 rs1216705942 |
175 | A>G | No |
ClinGen gnomAD |
|
|
rs776135078 CA4816307 |
178 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA4816304 rs775383487 |
182 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA4816303 rs371732086 |
183 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1411941859 CA371749183 |
186 | K>N | No |
ClinGen gnomAD |
|
|
CA4816302 rs745776762 |
188 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA181487865 rs751324212 |
192 | L>F | No |
ClinGen Ensembl |
|
|
CA4816300 rs757276935 |
192 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs777867214 CA4816298 |
194 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1034960477 CA181487859 |
194 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs756324319 CA4816297 |
197 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1237556713 CA371749113 |
197 | D>N | No |
ClinGen TOPMed |
|
|
CA371749105 rs1237315368 |
198 | V>E | No |
ClinGen gnomAD |
|
|
rs753085465 CA4816296 |
198 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA4816294 rs767848623 |
200 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM752429 CA4816293 rs755521604 |
201 | E>D | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1275153748 CA371749090 |
201 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA371749089 rs1275153748 |
201 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1355919826 CA371749071 |
203 | N>S | No |
ClinGen gnomAD |
|
|
rs752059011 CA4816292 |
204 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368164737 CA4816291 |
204 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs138095121 CA181487834 |
204 | Q>R | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA371749062 rs1563549469 |
205 | L>M | No |
ClinGen Ensembl |
|
|
rs1435814449 CA371749049 |
207 | A>S | No |
ClinGen TOPMed |
|
|
CA371749046 rs1200927452 |
207 | A>V | No |
ClinGen TOPMed |
|
|
CA4816289 rs149331132 |
208 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs763684089 CA4816287 |
209 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs112357919 CA181487816 |
211 | K>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4816286 rs112357919 |
211 | K>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs775473155 CA4816284 |
212 | N>K | No |
ClinGen ExAC TOPMed |
|
| rs759886730 | 212 | N>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs148129681 CA4816282 |
213 | H>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4816281 rs774138654 |
213 | H>R | No |
ClinGen ExAC gnomAD |
|
|
COSM232823 CA4816283 rs148129681 |
213 | H>Y | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA4816280 rs770839197 |
214 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4816279 rs749363533 |
215 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1325943115 CA371748995 |
216 | F>Y | No |
ClinGen TOPMed |
|
|
rs1249222971 CA371748988 |
217 | S>F | No |
ClinGen gnomAD |
|
|
rs770053146 CA4816277 |
217 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748340355 CA371748971 |
219 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs781604940 CA4816275 |
220 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371748954 rs1487694824 |
222 | N>S | No |
ClinGen gnomAD |
|
|
CA4816274 rs755323903 |
223 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA371748943 rs1320046220 |
224 | K>Q | No |
ClinGen TOPMed |
|
|
CA4816273 rs751864506 |
225 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1228456163 CA371748931 |
226 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA371748905 rs1175044683 |
228 | A>T | Variant assessed as Somatic; 4.785e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA371748902 rs1412697375 |
228 | A>V | No |
ClinGen gnomAD |
|
|
CA181486320 rs910675517 |
229 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs545406368 CA181486318 |
233 | K>E | No |
ClinGen Ensembl |
|
| TCGA novel | 234 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4816245 rs755668545 |
236 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 237 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4816243 rs563171694 |
240 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4816241 rs754632901 |
242 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA371748804 rs912462956 |
243 | M>L | No |
ClinGen TOPMed |
|
|
CA181486310 rs912462956 |
243 | M>V | No |
ClinGen TOPMed |
|
|
rs1219771044 CA371748768 |
248 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 250 | L>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA181486308 rs374478839 |
252 | N>H | No |
ClinGen ESP |
|
|
rs1416283331 CA371748738 |
252 | N>K | No |
ClinGen gnomAD |
|
|
CA371748733 rs1379387235 |
253 | F>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs766169344 CA4816239 |
258 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs773190007 CA4816237 |
259 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA371748695 rs1171112658 |
259 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA4816238 rs762868325 |
259 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA371748698 rs762868325 |
259 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4816236 rs763318190 |
260 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4816235 rs201470559 |
260 | N>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1476317835 CA371748683 |
261 | R>T | No |
ClinGen gnomAD |
|
|
CA371748675 rs1257042835 |
262 | L>W | No |
ClinGen TOPMed gnomAD |
|
|
CA371748672 rs1369428308 |
263 | G>R | No |
ClinGen gnomAD |
|
|
CA4816234 rs776652562 |
264 | F>C | No |
ClinGen ExAC gnomAD |
|
| rs769712312 | 266 | Q>S | Variant assessed as Somatic; 4.888e-05 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371748632 rs1317806937 |
268 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs768887665 CA4816232 |
268 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA371748631 rs1317806937 |
268 | E>V | No |
ClinGen TOPMed gnomAD |
|
|
rs747232117 CA4816231 |
269 | L>F | No |
ClinGen ExAC |
|
|
CA4816230 rs370504100 |
271 | L>F | No |
ClinGen ESP ExAC gnomAD |
|
|
CA4816229 rs370504100 |
271 | L>I | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1480298416 CA371748614 |
271 | L>R | No |
ClinGen TOPMed |
|
|
rs746417393 CA4816228 |
272 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA371748593 rs1352404088 |
274 | K>M | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 274 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1174971805 CA371748598 |
274 | K>Q | No |
ClinGen TOPMed |
|
|
CA181486289 rs377226374 |
275 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA371748556 rs1381208820 |
278 | D>G | No |
ClinGen TOPMed |
|
|
CA4816202 rs779763855 |
278 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA371748551 rs1269893515 |
279 | L>V | No |
ClinGen gnomAD |
|
|
rs750241466 CA4816200 |
282 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA371748535 rs750241466 |
282 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757226262 CA4816198 |
282 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757226262 CA371748533 |
282 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4816199 rs757226262 |
282 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4816197 rs141604955 |
283 | L>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4816196 rs764136692 |
283 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs760818906 CA4816195 |
285 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA181486217 rs754129908 |
286 | L>Q | No |
ClinGen Ensembl |
|
|
CA371748504 rs767808032 |
288 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA4816193 rs767808032 |
288 | T>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 292 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371748479 rs1215456192 |
292 | E>G | No |
ClinGen TOPMed |
|
|
CA4816191 rs374487894 |
294 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1230972210 CA371748461 |
295 | K>R | No |
ClinGen gnomAD |
|
|
rs910518208 CA181486212 |
296 | E>K | No |
ClinGen TOPMed |
|
|
CA4816190 rs771421999 |
297 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA4816189 rs763615774 |
298 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1486645115 CA371748440 |
298 | M>V | No |
ClinGen gnomAD |
|
|
CA371748433 rs1215426735 |
299 | K>Q | No |
ClinGen gnomAD |
|
|
rs1278876271 CA371748404 |
301 | Y>C | No |
ClinGen gnomAD |
|
|
CA4816173 rs759908728 |
302 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4816172 rs374910514 |
302 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed |
|
rs199557277 CA4816170 |
304 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs766653973 CA4816171 |
304 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA4816168 rs770356464 |
306 | G>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 306 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371748355 rs762204307 |
309 | H>D | No |
ClinGen ExAC gnomAD |
|
|
CA371748353 rs1326918755 |
309 | H>R | No |
ClinGen TOPMed |
|
|
rs762204307 CA4816166 |
309 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA371748344 rs150135437 CA4816163 |
310 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4816165 rs775105677 |
310 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs778548567 COSM1102765 CA4816162 |
311 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs770500814 CA371748317 |
314 | H>L | No |
ClinGen ExAC gnomAD |
|
|
rs770500814 CA4816161 |
314 | H>P | No |
ClinGen ExAC gnomAD |
|
|
CA4816160 rs372199279 |
315 | M>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4816159 rs777379067 |
320 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs756122298 CA4816158 |
321 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs187208751 CA4816157 |
322 | M>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 323 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4816155 rs755124734 |
325 | A>S | No |
ClinGen ExAC gnomAD |
|
|
COSM117571 rs1316140187 CA371748236 |
326 | N>I | ovary Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA371748233 rs1286232992 |
327 | K>Q | No |
ClinGen gnomAD |
|
|
rs538309199 CA4816154 |
329 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs766739931 CA4816153 |
329 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA181485868 rs1010799619 |
331 | T>S | No |
ClinGen TOPMed |
|
|
CA4816151 rs750850029 |
332 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA181485863 rs994613977 |
333 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA4816149 rs762448558 |
333 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA181485861 rs994613977 |
333 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA181485856 rs1004599859 |
334 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
CA181485854 rs369246822 |
335 | D>Y | No |
ClinGen ESP TOPMed |
|
|
CA181485852 rs890118605 |
339 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA371748146 rs1163519089 |
340 | V>M | No |
ClinGen gnomAD |
|
|
CA371748140 rs1472235778 |
341 | M>V | No |
ClinGen gnomAD |
|
|
rs764525644 CA4816147 |
342 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1586163413 CA371748123 |
343 | I>V | No |
ClinGen Ensembl |
|
|
rs1180213445 CA371748115 |
344 | P>S | No |
ClinGen gnomAD |
|
|
CA371748105 rs1563544907 |
345 | H>Q | No |
ClinGen Ensembl |
|
|
CA371748093 rs1458160759 |
347 | I>L | No |
ClinGen gnomAD |
|
|
CA4816146 rs759048995 |
348 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1563544892 CA371748082 |
349 | V>F | No |
ClinGen Ensembl |
|
|
rs773808375 CA4816145 |
350 | K>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA181485847 rs773808375 |
350 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371748054 rs1210695690 |
353 | Q>* | No |
ClinGen gnomAD |
|
|
rs1355856086 CA371748049 |
353 | Q>H | No |
ClinGen gnomAD |
|
|
CA371757966 rs1286911802 |
357 | T>K | No |
ClinGen gnomAD |
|
|
CA371757960 rs1450021753 |
358 | R>K | No |
ClinGen gnomAD |
|
|
CA371757945 rs780346728 |
360 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746912502 CA4816114 |
360 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA371757936 rs1187118927 |
362 | V>I | No |
ClinGen TOPMed |
|
|
rs772264077 CA4816112 |
363 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA371757913 rs1471277534 |
365 | R>K | No |
ClinGen TOPMed |
|
|
rs202146314 CA181512844 |
366 | H>Y | No |
ClinGen TOPMed |
|
|
rs745903071 CA4816110 |
367 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs779006858 CA4816109 |
368 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA371757866 rs1423256451 |
372 | L>* | No |
ClinGen gnomAD |
|
|
CA4816108 rs757458162 |
374 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754172612 CA4816107 |
375 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA4816106 rs778086533 |
376 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs147727173 CA4816105 |
377 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA371757822 rs1375528496 |
379 | P>S | No |
ClinGen TOPMed |
|
|
CA4816104 rs753191808 |
380 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs762378020 CA4816102 |
383 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA4816100 rs373637450 |
387 | L>M | No |
ClinGen ESP ExAC gnomAD |
|
|
rs761504659 CA4816099 |
388 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1355988237 CA371757745 |
390 | L>P | No |
ClinGen TOPMed |
|
|
rs1450367405 CA371757737 |
392 | S>P | No |
ClinGen gnomAD |
|
|
CA4816097 COSM282906 rs370527769 |
392 | S>Y | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4816096 rs576105933 |
393 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA371757731 rs1563542848 |
393 | I>V | No |
ClinGen Ensembl |
|
|
CA181512828 rs377505762 |
394 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377505762 CA4816095 |
394 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA181512826 VAR_053786 rs7461970 |
396 | E>G | No |
ClinGen UniProt Ensembl dbSNP |
|
|
rs771977698 CA4816094 |
397 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1168664586 CA371757696 |
398 | F>C | No |
ClinGen gnomAD |
|
|
CA4816092 rs375337121 |
400 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA371757673 rs1586160546 |
401 | E>D | No |
ClinGen Ensembl |
|
|
CA4816091 rs771103964 |
401 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA181512817 rs1013201589 |
402 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
CA371757663 rs1240632908 |
403 | A>T | No |
ClinGen gnomAD |
|
|
rs1199813615 CA371757653 |
404 | K>N | No |
ClinGen gnomAD |
|
|
rs149018178 CA181512815 |
407 | V>A | No |
ClinGen ESP |
|
| TCGA novel | 408 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1249085635 CA371757626 |
409 | D>N | No |
ClinGen gnomAD |
|
|
rs1321880171 CA371757614 |
410 | F>S | No |
ClinGen gnomAD |
|
|
rs1223364111 CA371757617 |
410 | F>V | No |
ClinGen gnomAD |
|
|
CA371757599 rs1434997920 |
412 | K>T | No |
ClinGen gnomAD |
|
|
rs778174329 CA4816089 |
416 | T>M | No |
ClinGen ExAC gnomAD |
|
| rs1563542774 | 416 | T>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA181512812 rs145439422 |
417 | L>V | No |
ClinGen ESP |
No associated diseases with Q96E29
4 regional properties for Q96E29
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| conserved_site | ATP-dependent RNA helicase DEAD-box, conserved site | 318 - 326 | IPR000629 |
| domain | Helicase, C-terminal | 408 - 560 | IPR001650 |
| domain | DEAD/DEAH box helicase domain | 183 - 367 | IPR011545 |
| domain | Helicase superfamily 1/2, ATP-binding domain | 178 - 398 | IPR014001 |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| mitochondrial outer membrane | The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope. |
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| transcription cis-regulatory region binding | Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| mitochondrial ribosome assembly | The aggregation, arrangement and bonding together of the mitochondrial ribosome and of its subunits. |
| negative regulation of DNA-templated transcription | Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |
5 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q5ZJC8 | MTERF3 | Transcription termination factor 3, mitochondrial | Gallus gallus (Chicken) | PR |
| Q99551 | MTERF1 | Transcription termination factor 1, mitochondrial | Homo sapiens (Human) | PR |
| Q8CHZ9 | Mterf1a | Transcription termination factor 1a, mitochondrial | Mus musculus (Mouse) | PR |
| B9EJ57 | Mterf1b | Transcription termination factor 1b, mitochondrial | Mus musculus (Mouse) | PR |
| Q8R3J4 | Mterf3 | Transcription termination factor 3, mitochondrial | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MALSAQQIPR | WFNSVKLRSL | INAAQLTKRF | TRPARTLLHG | FSAQPQISSD | NCFLQWGFKT |
| 70 | 80 | 90 | 100 | 110 | 120 |
| YRTSSLWNSS | QSTSSSSQEN | NSAQSSLLPS | MNEQSQKTQN | ISSFDSELFL | EELDELPPLS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PMQPISEEEA | IQIIADPPLP | PASFTLRDYV | DHSETLQKLV | LLGVDLSKIE | KHPEAANLLL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| RLDFEKDIKQ | MLLFLKDVGI | EDNQLGAFLT | KNHAIFSEDL | ENLKTRVAYL | HSKNFSKADV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| AQMVRKAPFL | LNFSVERLDN | RLGFFQKELE | LSVKKTRDLV | VRLPRLLTGS | LEPVKENMKV |
| 310 | 320 | 330 | 340 | 350 | 360 |
| YRLELGFKHN | EIQHMITRIP | KMLTANKMKL | TETFDFVHNV | MSIPHHIIVK | FPQVFNTRLF |
| 370 | 380 | 390 | 400 | 410 | |
| KVKERHLFLT | YLGRAQYDPA | KPNYISLDKL | VSIPDEIFCE | EIAKASVQDF | EKFLKTL |