Q92994
Gene name |
BRF1 (BRF, GTF3B, TAF3B2, TAF3C) |
Protein name |
Transcription factor IIIB 90 kDa subunit |
Names |
TFIIIB90, hTFIIIB90, B-related factor 1, BRF-1, hBRF, TAF3B2, TATA box-binding protein-associated factor, RNA polymerase III, subunit 2 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:2972 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q92994
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q92994-F1 | Predicted | AlphaFoldDB |
695 variants for Q92994
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV000522521 rs757115243 RCV003159675 CA391178001 |
216 | R>Q | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA391177952 RCV002557927 rs1343140353 RCV001257319 |
218 | W>C | Sensorineural hearing loss disorder Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000150046 rs370270828 CA174016 VAR_072710 |
223 | R>W | Cerebellar-facial-dental syndrome CFDS [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
rs606231416 RCV001267205 VAR_072711 CA174012 RCV000150043 |
226 | S>L | Cerebellar-facial-dental syndrome Inborn genetic diseases CFDS [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
|
rs373957300 RCV000150044 RCV001365019 VAR_072712 RCV002515997 CA174014 |
259 | T>M | Cerebellar-facial-dental syndrome Inborn genetic diseases CFDS [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
rs1595325674 CA391172300 RCV000850534 |
260 | L>P | Cerebellar-facial-dental syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000150045 VAR_072713 CA174018 rs606231450 |
292 | P>H | Cerebellar-facial-dental syndrome CFDS [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
RCV000850533 rs868673013 |
533 | K>missing | Cerebellar-facial-dental syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002470812 rs188142316 CA249371 RCV002517349 RCV000203170 |
565 | A>S | Cerebellar-facial-dental syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA7387025 RCV001328844 RCV002546279 rs770411283 |
572 | R>G | Cerebellar-facial-dental syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1245167131 CA391187618 |
3 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA391187606 rs1204768321 |
4 | R>C | No |
ClinGen gnomAD |
|
|
CA391187507 rs1325267855 |
7 | R>C | No |
ClinGen TOPMed |
|
|
CA7388244 rs763121572 |
8 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391187432 rs1440089858 |
10 | G>S | No |
ClinGen TOPMed |
|
|
rs1443924607 CA391187392 |
11 | G>D | No |
ClinGen gnomAD |
|
|
CA266513461 rs587752262 |
12 | T>A | No |
ClinGen 1000Genomes |
|
|
CA7388243 rs746223336 |
12 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391187306 rs1395036505 |
14 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1290344105 CA391187267 |
15 | E>Q | No |
ClinGen gnomAD |
|
|
CA7388242 rs770073200 |
17 | D>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 17 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391187162 rs1158166346 |
19 | A>V | No |
ClinGen gnomAD |
|
|
rs1437882755 CA391187067 |
22 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA391186955 rs1184475904 |
27 | A>T | No |
ClinGen gnomAD |
|
|
rs1441994563 CA391186944 |
27 | A>V | No |
ClinGen gnomAD |
|
|
rs201800759 CA266513446 |
28 | C>* | No |
ClinGen Ensembl |
|
|
rs1415437840 CA391186826 |
34 | D>G | No |
ClinGen TOPMed |
|
|
CA391186812 rs1360999911 |
35 | N>D | No |
ClinGen gnomAD |
|
|
rs771740040 CA266513443 |
35 | N>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs771740040 CA7388239 |
35 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391186767 rs1243617468 |
36 | I>N | No |
ClinGen gnomAD |
|
|
rs1050882461 CA266513437 |
37 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA7388237 rs778814328 |
40 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388236 rs754962176 |
41 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1566878460 CA391186588 |
42 | Q>L | No |
ClinGen Ensembl |
|
|
CA266513433 rs587639646 |
46 | S>G | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1426430844 CA391186480 |
47 | S>G | No |
ClinGen gnomAD |
|
|
CA391186449 rs1422254753 |
48 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs748734610 CA7388235 |
50 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779547907 CA7388233 |
51 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391186368 rs1472627627 RCV000591631 |
52 | S>L | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA266513428 rs779238570 |
54 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA391186266 rs1262856470 |
56 | Q>K | No |
ClinGen gnomAD |
|
|
rs1291885644 CA391186180 |
59 | S>F | No |
ClinGen gnomAD |
|
|
rs960885531 CA266513427 |
60 | L>P | No |
ClinGen Ensembl |
|
|
CA391186131 rs1208711227 |
62 | G>S | No |
ClinGen gnomAD |
|
|
CA391203882 rs1471142941 |
63 | A>G | No |
ClinGen gnomAD |
|
| TCGA novel | 63 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391203858 rs1160679859 |
64 | G>D | No |
ClinGen TOPMed |
|
|
rs1347287529 CA391203873 |
64 | G>S | No |
ClinGen Ensembl |
|
|
rs779492867 CA391203820 |
66 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779492867 CA7388215 |
66 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1595467848 CA391203830 |
66 | T>P | No |
ClinGen Ensembl |
|
|
rs587741849 CA7388214 |
67 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA391203719 rs1205387915 |
71 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs778312875 CA7388209 |
72 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA7388210 rs751916363 |
72 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA266534351 rs968751056 |
73 | F>I | No |
ClinGen TOPMed gnomAD |
|
|
CA7388208 rs758925705 |
73 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
rs144673138 CA7388207 RCV000886876 |
75 | V>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1454745609 CA391203596 |
77 | L>M | No |
ClinGen gnomAD |
|
|
rs759527043 CA7388205 |
80 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs892408346 CA266534322 |
81 | S>L | Variant assessed as Somatic; 4.66e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs754004772 CA7388204 |
81 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs892408346 CA391203491 |
81 | S>W | No |
ClinGen TOPMed gnomAD |
|
|
CA391203474 rs1438513083 |
82 | R>G | No |
ClinGen gnomAD |
|
|
rs774096096 CA7388201 |
83 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA391203436 rs1483336295 |
84 | Q>* | No |
ClinGen gnomAD |
|
|
CA266534310 rs776644212 |
85 | T>I | No |
ClinGen Ensembl |
|
|
CA7388200 rs768466032 |
87 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs367890914 CA7388168 |
90 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1172789693 CA391200451 |
90 | R>S | No |
ClinGen TOPMed |
|
|
rs773225381 CA7388167 |
91 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA7388166 rs200351753 |
91 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA391200434 rs1433138813 |
92 | H>D | No |
ClinGen TOPMed |
|
|
rs750572106 CA7388165 |
93 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA391200403 rs1595440575 |
94 | H>Y | No |
ClinGen Ensembl |
|
|
rs1218406568 CA391200391 |
95 | H>Q | No |
ClinGen gnomAD |
|
|
CA391200372 rs1387807961 |
98 | N>K | No |
ClinGen gnomAD |
|
|
CA391200364 rs1287411451 |
99 | Q>H | No |
ClinGen TOPMed |
|
|
CA391200319 rs1361328065 |
106 | C>R | No |
ClinGen TOPMed |
|
|
rs1387477651 CA391200317 |
106 | C>Y | No |
ClinGen TOPMed |
|
|
rs1400567464 CA391200293 |
110 | A>T | No |
ClinGen gnomAD |
|
|
rs765101934 CA7388161 |
112 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388159 rs776600411 |
116 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA391200221 rs1233947648 |
117 | A>T | No |
ClinGen TOPMed |
|
|
CA266528713 rs867134897 |
117 | A>V | No |
ClinGen Ensembl |
|
|
rs760245832 CA7388157 COSM1300445 |
118 | V>M | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA7388156 rs772857628 |
119 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA391200173 rs1189537251 |
121 | H>N | No |
ClinGen gnomAD |
|
|
rs1595440371 CA391200145 |
123 | T>P | No |
ClinGen Ensembl |
|
|
rs199564741 CA7388154 |
124 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1198471192 CA391200120 |
124 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA391200116 rs1198471192 |
124 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs200491359 CA7388152 |
125 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA391200102 rs1364184603 |
126 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA391200067 rs1312110330 |
129 | A>P | No |
ClinGen gnomAD |
|
| TCGA novel | 129 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749659821 CA7388151 |
130 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs201048924 CA7388149 |
131 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs770032316 CA266528692 |
133 | A>V | No |
ClinGen Ensembl |
|
|
rs1016519738 CA266528689 |
137 | Y>* | No |
ClinGen TOPMed |
|
|
CA7388147 rs781256116 |
138 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391199926 rs1441600529 |
140 | C>G | No |
ClinGen gnomAD |
|
|
CA7388144 rs138790972 |
141 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391199908 rs138790972 |
141 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs754797281 CA7388143 |
142 | T>M | No |
ClinGen ExAC gnomAD |
|
|
CA391199871 rs1258770816 |
144 | G>D | No |
ClinGen gnomAD |
|
|
CA391199855 rs1201383048 |
145 | T>M | No |
ClinGen gnomAD |
|
| rs1219364193 | 146 | P>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7388141 rs766358291 |
146 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1587274 CA266528675 rs1044258239 |
147 | H>Y | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs762517054 CA7388116 |
149 | L>I | No |
ClinGen ExAC gnomAD |
|
|
CA7388114 rs765614268 |
153 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs1595402421 CA391194888 |
154 | D>A | No |
ClinGen Ensembl |
|
|
CA7388112 rs777117046 |
154 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391194811 rs1208875942 |
157 | Q>R | No |
ClinGen gnomAD |
|
|
rs1303242983 CA391192565 |
160 | V>A | No |
ClinGen TOPMed |
|
|
rs750860515 CA7388052 |
162 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA7388053 rs750860515 |
162 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1566838831 CA391192491 |
165 | K>Q | No |
ClinGen Ensembl |
|
|
CA391192466 rs1424019348 |
166 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
CA391192454 rs1419413708 |
167 | F>L | No |
ClinGen gnomAD |
|
|
rs1267637092 CA391192403 |
170 | L>S | No |
ClinGen TOPMed |
|
|
rs1417529061 CA391192368 |
172 | R>I | No |
ClinGen gnomAD |
|
|
rs1192983931 CA391192359 |
173 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA391192313 rs1252287401 |
175 | C>S | No |
ClinGen TOPMed |
|
|
rs764292906 CA7388048 |
178 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA7388046 rs775546215 |
179 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA391192232 rs775546215 |
179 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA266515714 rs963629957 |
179 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs866491568 CA266515706 |
180 | A>V | No |
ClinGen Ensembl |
|
|
rs760527043 CA391178658 CA7387635 |
182 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 182 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA266515698 rs986944444 |
182 | D>N | No |
ClinGen TOPMed |
|
|
rs1056689926 CA391178651 |
183 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1206689613 CA391178630 |
183 | P>L | No |
ClinGen gnomAD |
|
|
CA391178636 rs1206689613 |
183 | P>R | No |
ClinGen gnomAD |
|
|
rs1056689926 CA266507799 |
183 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1463895752 CA391178613 |
184 | C>F | No |
ClinGen TOPMed |
|
|
CA7387632 rs761318583 |
184 | C>W | No |
ClinGen ExAC gnomAD |
|
|
rs768374361 CA7387630 |
185 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1231074391 CA391178579 |
186 | Y>D | No |
ClinGen TOPMed gnomAD |
|
|
CA391178583 rs1231074391 |
186 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
CA391178552 rs1312890175 |
187 | I>V | No |
ClinGen TOPMed |
|
|
CA7387626 rs587674292 |
188 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA391178499 rs1380995883 |
189 | R>C | No |
ClinGen gnomAD |
|
|
COSM3814364 CA7387625 rs777141032 |
189 | R>H | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs747074989 CA7387623 |
190 | F>I | No |
ClinGen ExAC |
|
|
CA391178469 rs777689168 |
191 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7387622 rs777689168 |
191 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1383009789 CA391178460 |
191 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA391178447 rs1389294140 |
192 | H>R | No |
ClinGen gnomAD |
|
|
rs149525559 CA266507798 |
192 | H>Y | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1186639014 CA391178411 |
194 | L>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 195 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201913661 CA7387619 |
195 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201913661 CA7387618 |
195 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1047774060 CA266507796 |
197 | G>R | No |
ClinGen TOPMed |
|
|
CA7387616 rs767448415 |
198 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391178284 rs1381401661 |
200 | N>K | No |
ClinGen gnomAD |
|
|
CA391178279 rs1566823324 |
201 | H>D | No |
ClinGen Ensembl |
|
|
rs763667067 COSM1133436 CA7387614 |
202 | E>K | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs763667067 CA7387613 |
202 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7387610 rs764998019 |
204 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA266507794 rs61741518 |
204 | S>F | No |
ClinGen Ensembl |
|
|
CA266507792 rs1040727348 |
205 | M>I | No |
ClinGen Ensembl |
|
|
CA391178203 rs776894824 |
205 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA266507793 rs923200396 |
205 | M>T | No |
ClinGen Ensembl |
|
|
CA7387608 rs776894824 |
205 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7387607 rs771423682 |
206 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs1429962476 CA391178168 |
207 | A>P | No |
ClinGen gnomAD |
|
|
CA391178170 rs1429962476 |
207 | A>T | No |
ClinGen gnomAD |
|
|
rs1165925382 CA391178152 |
208 | L>V | No |
ClinGen gnomAD |
|
|
CA266507791 rs910386210 |
209 | R>K | No |
ClinGen Ensembl |
|
|
rs1198030611 CA391178118 |
210 | L>F | No |
ClinGen gnomAD |
|
|
CA391178105 rs1266832350 |
211 | L>R | No |
ClinGen gnomAD |
|
|
rs368844889 CA7387600 |
213 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391178075 rs1432386704 |
213 | R>S | No |
ClinGen TOPMed |
|
|
rs368844889 CA7387601 |
213 | R>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs779038914 CA7387602 |
213 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs780827424 CA7387599 |
214 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA266507790 rs913549604 |
215 | K>N | No |
ClinGen TOPMed |
|
|
rs1347530018 CA391178023 |
215 | K>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA7387598 rs757115243 |
216 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391178005 rs1018742474 |
216 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA266507788 rs985961880 |
217 | D>N | No |
ClinGen TOPMed |
|
|
rs751448117 CA7387597 |
219 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA391177881 rs1410112614 |
220 | H>Q | No |
ClinGen gnomAD |
|
|
rs374448512 CA7387596 |
221 | T>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391177868 rs1326365827 |
221 | T>I | No |
ClinGen gnomAD |
|
|
CA7387595 rs757925995 |
222 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA266507787 rs960682350 |
222 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1171973014 CA391177829 |
223 | R>Q | No |
ClinGen gnomAD |
|
|
rs878910025 CA266507786 |
224 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA7387593 rs759137877 |
224 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1232554749 CA391177777 |
225 | P>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1003577469 CA266507785 |
226 | S>P | No |
ClinGen Ensembl |
|
|
rs1322016947 CA391177731 |
227 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA7387587 rs761839348 |
227 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774447444 CA391177709 |
228 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA266507783 rs1006281657 |
228 | L>P | No |
ClinGen Ensembl |
|
|
rs774447444 CA7387586 |
228 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs140813617 CA391177677 |
229 | C>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1334472313 CA391177689 |
229 | C>R | No |
ClinGen TOPMed |
|
|
rs778146369 CA266507782 |
229 | C>Y | No |
ClinGen Ensembl |
|
|
rs780380442 CA7387583 |
230 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA391177645 rs1455224138 |
231 | A>T | No |
ClinGen TOPMed |
|
|
CA7387515 rs758735678 COSM1477403 |
232 | A>V | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 233 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs765848072 CA7387513 |
233 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs765768932 CA391173131 |
235 | V>F | No |
ClinGen TOPMed |
|
|
rs765768932 CA266507054 |
235 | V>I | No |
ClinGen TOPMed |
|
|
rs753997223 CA7387511 |
236 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs750662507 CA7387508 |
237 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA7387507 rs763937027 |
238 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1371715589 CA391173042 |
238 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
CA7387506 CA391173000 rs762722957 |
239 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA266507053 rs769311991 |
239 | M>V | No |
ClinGen Ensembl |
|
|
CA7387505 rs775431304 |
240 | H>Q | No |
ClinGen ExAC |
|
|
CA266507052 rs370062840 |
240 | H>Y | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA266507051 rs1002256447 |
241 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs769736138 CA7387504 |
241 | D>G | No |
ClinGen ExAC |
|
|
rs1405996666 CA391172930 |
241 | D>Y | No |
ClinGen gnomAD |
|
|
rs1566817174 CA391172861 |
242 | F>I | No |
ClinGen Ensembl |
|
|
CA7387501 rs587707880 |
243 | R>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA7387500 rs61743597 |
243 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA7387499 rs746649045 |
244 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA391172761 rs1415764640 |
244 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA391172713 rs1182244527 |
245 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA391172722 rs1182244527 |
245 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
rs587656581 CA391172702 |
246 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs587656581 CA7387497 |
246 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 247 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs145711250 CA7387494 |
248 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA266507049 rs1018441033 |
248 | E>G | No |
ClinGen Ensembl |
|
|
rs1595326275 CA391172634 |
248 | E>Q | No |
ClinGen Ensembl |
|
|
rs200622361 CA391172551 |
249 | V>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200622361 CA7387493 |
249 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs780260950 CA7387490 |
250 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA7387492 rs1315367857 |
250 | I>N | No |
ClinGen gnomAD |
|
|
CA391172515 rs756206546 |
251 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA7387489 rs756206546 |
251 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA7387487 rs769396533 |
251 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769396533 CA391172511 |
251 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748521815 CA266507047 |
251 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA7387488 rs769396533 |
251 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7387484 rs765117516 |
253 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA7387483 rs776597244 |
254 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391172404 rs1351290589 |
255 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs773305573 CA7387478 |
256 | C>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7387480 rs760166609 |
256 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs186639069 CA266507038 |
256 | C>Y | No |
ClinGen 1000Genomes gnomAD |
|
| TCGA novel | 257 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771649813 CA391172354 |
257 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7387474 rs769193575 |
259 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA7387475 rs769193575 |
259 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA7387472 rs756152891 |
260 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs151290358 CA7387469 |
261 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391172284 rs781426397 |
261 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1232769838 CA391172267 |
262 | K>E | No |
ClinGen TOPMed |
|
|
CA391172243 rs1252355202 |
262 | K>N | No |
ClinGen TOPMed |
|
|
rs1481925834 CA391172228 |
263 | R>K | No |
ClinGen TOPMed |
|
|
CA391199391 rs1262648781 |
264 | L>I | No |
ClinGen TOPMed |
|
|
rs1397499816 CA391199375 |
265 | T>M | No |
ClinGen gnomAD |
|
| TCGA novel | 267 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1595307710 CA391199328 |
270 | T>P | No |
ClinGen Ensembl |
|
|
rs896756305 CA266556190 |
272 | T>I | No |
ClinGen Ensembl |
|
|
CA391199300 rs1427255961 |
273 | S>G | No |
ClinGen gnomAD |
|
|
rs1160582878 CA391199277 |
274 | Q>H | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 275 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7387425 rs779694890 |
277 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA391199218 rs1465825363 |
279 | E>D | No |
ClinGen TOPMed |
|
|
rs1040704365 CA266556180 |
279 | E>K | No |
ClinGen TOPMed |
|
|
CA266556177 rs1056624433 |
280 | F>Y | No |
ClinGen Ensembl |
|
|
rs1180120530 CA391199200 |
281 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA7387423 rs750324879 |
281 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs781194314 COSM1640026 CA7387422 |
282 | K>N | stomach [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA391199171 rs587663572 |
283 | I>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7387421 rs756769788 |
283 | I>S | No |
ClinGen ExAC |
|
|
rs763799830 CA391199169 |
284 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7387419 rs763799830 |
284 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391199125 rs1349520617 |
287 | E>D | No |
ClinGen gnomAD |
|
|
CA391199118 rs1277340098 |
288 | E>V | No |
ClinGen TOPMed gnomAD |
|
|
CA266556167 rs943704083 |
289 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1595307447 CA391199095 |
290 | D>A | No |
ClinGen Ensembl |
|
|
CA391199091 rs760010212 |
290 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371691984 CA7387416 |
290 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1450353048 CA391199084 |
291 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA7387413 rs771437051 |
292 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391199073 rs606231450 |
292 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs771437051 CA266556155 |
292 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs747435524 | 293 | S>L | Variant assessed as Somatic; 4.638e-05 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7387409 rs773768880 |
293 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391199039 rs1566813460 |
295 | T>A | No |
ClinGen Ensembl |
|
|
CA391199030 rs1160212466 |
296 | A>P | No |
ClinGen TOPMed |
|
|
rs1183582109 CA391199023 |
296 | A>V | No |
ClinGen gnomAD |
|
|
rs769409927 CA7387406 |
299 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769409927 CA391198995 |
299 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1404991637 CA391198965 |
301 | L>V | No |
ClinGen TOPMed |
|
|
rs145340613 CA7387402 |
302 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7387403 rs757290383 |
302 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7387401 rs777398484 |
305 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs587763042 CA7387368 COSM1140460 |
306 | L>F | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA266555834 rs991976032 |
307 | E>Q | No |
ClinGen TOPMed |
|
|
rs1374120474 CA391198888 |
308 | Q>K | No |
ClinGen TOPMed |
|
|
CA266555825 rs937916073 |
309 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs773221690 CA7387367 |
309 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1376060032 CA391198863 |
312 | K>E | No |
ClinGen gnomAD |
|
|
rs747568065 CA7387365 |
313 | K>I | No |
ClinGen ExAC gnomAD |
|
|
rs1441852162 CA391198852 |
313 | K>N | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 313 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA266555818 rs748853809 |
315 | E>Q | No |
ClinGen Ensembl |
|
|
CA391198835 rs1005708584 |
316 | E>A | No |
ClinGen TOPMed |
|
|
rs1353301993 CA391198833 |
316 | E>D | No |
ClinGen gnomAD |
|
|
rs1005708584 CA266555815 |
316 | E>V | No |
ClinGen TOPMed |
|
|
CA391198831 rs1595304804 |
317 | V>I | No |
ClinGen Ensembl |
|
|
rs778467508 CA7387364 |
318 | E>K | No |
ClinGen ExAC |
|
| TCGA novel | 319 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1186850694 CA391198791 |
321 | I>V | No |
ClinGen TOPMed |
|
|
CA266555745 rs376099538 |
322 | S>F | No |
ClinGen ESP |
|
|
rs1172435406 CA391198779 |
323 | S>G | No |
ClinGen Ensembl |
|
|
rs1443948255 CA391198774 |
323 | S>R | No |
ClinGen gnomAD |
|
|
CA7387343 rs373442568 |
323 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7387342 rs745560902 |
326 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA266555734 rs752212809 |
327 | A>T | No |
ClinGen Ensembl |
|
|
rs866457833 CA266555732 |
328 | I>T | No |
ClinGen Ensembl |
|
|
rs1479121773 CA391198743 |
328 | I>V | No |
ClinGen TOPMed |
|
|
CA7387341 RCV000920598 rs145719901 |
329 | E>D | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA391198737 rs1486861999 |
329 | E>Q | No |
ClinGen gnomAD |
|
|
rs1566812484 CA391198729 |
330 | I>F | No |
ClinGen Ensembl |
|
|
CA391198716 rs1470485854 |
332 | L>I | No |
ClinGen TOPMed |
|
|
CA391198686 TCGA novel rs1247096867 |
335 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen gnomAD NCI-TCGA |
|
CA266555717 rs925890336 |
336 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA7387338 rs149785516 |
336 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs758490702 CA391198680 |
337 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758490702 CA7387337 |
337 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1417478023 CA391198664 |
339 | A>T | No |
ClinGen gnomAD |
|
|
rs1366991609 CA391198647 |
340 | K>Q | No |
ClinGen gnomAD |
|
|
CA7387334 rs199596634 |
341 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA391198628 rs199596634 |
341 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs369278268 CA266555702 |
341 | G>R | No |
ClinGen ESP |
|
|
CA7387332 rs767342305 |
342 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA391198616 rs767342305 |
342 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA391198596 rs1430424462 |
344 | A>V | No |
ClinGen gnomAD |
|
|
CA266555690 rs139784804 |
345 | S>N | No |
ClinGen ESP |
|
| TCGA novel | 349 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391197986 rs1426380353 |
350 | G>A | No |
ClinGen TOPMed |
|
|
CA391197987 rs1426380353 |
350 | G>D | No |
ClinGen TOPMed |
|
|
rs1301043226 CA391197977 |
352 | T>A | No |
ClinGen TOPMed |
|
|
rs775463298 CA7387310 |
353 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391197956 rs1595283319 |
355 | T>P | No |
ClinGen Ensembl |
|
|
rs776287971 CA391197948 |
356 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138987370 CA7387308 |
356 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs776287971 CA7387307 |
356 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1373354612 CA391197940 |
358 | S>G | No |
ClinGen gnomAD |
|
|
rs61745396 CA7387305 |
358 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1220768092 CA391197915 |
361 | G>A | No |
ClinGen TOPMed |
|
|
CA391197918 rs1566807418 |
361 | G>R | No |
ClinGen Ensembl |
|
|
CA266553478 rs772610328 |
362 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA391197908 rs374522314 |
362 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs772610328 CA7387303 |
362 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA7387301 rs779570752 |
363 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1184465532 CA391197898 |
364 | D>N | No |
ClinGen gnomAD |
|
|
rs56294785 CA266553471 |
366 | E>Q | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 367 | D>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 367 | D>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391197877 rs1595283097 |
367 | D>Y | No |
ClinGen Ensembl |
|
|
CA7387299 rs56397863 |
368 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376648039 CA7387298 |
369 | E>D | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1385842432 CA391197860 |
369 | E>G | No |
ClinGen TOPMed |
|
|
CA391197853 rs1595283052 |
370 | L>R | No |
ClinGen Ensembl |
|
|
rs889517414 CA266553456 |
371 | E>K | No |
ClinGen TOPMed |
|
|
CA391197841 rs1202424876 |
372 | A>G | No |
ClinGen gnomAD |
|
|
CA7387297 rs142641074 |
373 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7387296 rs142641074 |
373 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs763864881 CA7387295 |
373 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA391197833 rs1441625710 |
374 | A>V | No |
ClinGen TOPMed |
|
|
CA391197829 rs1307039907 |
375 | S>G | No |
ClinGen gnomAD |
|
|
CA7387292 rs373698699 |
375 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7387291 rs370406922 |
376 | H>R | No |
ClinGen ESP ExAC gnomAD |
|
|
CA391197799 rs1413939556 |
379 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 379 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs765951217 CA7387289 |
380 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1320262621 CA391197779 |
382 | Y>D | No |
ClinGen TOPMed gnomAD |
|
|
COSM1607427 CA391197780 rs1320262621 |
382 | Y>H | liver [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA391197772 rs1454671489 |
383 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA7387288 rs377536607 |
383 | R>W | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
rs772501736 CA7387286 |
385 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs587772315 RCV000904372 |
388 | G>missing | No |
ClinVar dbSNP |
|
|
rs748541228 CA7387285 |
388 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7387279 rs756277480 |
391 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA7387280 rs756277480 |
391 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs373909035 CA7387282 |
391 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs373909035 CA7387281 |
391 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391197726 rs756277480 |
391 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA7387276 rs368792547 |
393 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7387277 rs368792547 |
393 | S>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs765115185 CA7387274 |
396 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs765913603 CA266553389 |
396 | A>V | No |
ClinGen TOPMed |
|
|
rs1314234410 CA391197686 |
398 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1447455773 CA391197681 |
398 | S>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 399 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7387272 rs753860259 |
400 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391197663 rs1360072655 |
401 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
rs757884349 CA7387271 |
401 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760239261 CA7387270 |
401 | W>S | No |
ClinGen ExAC gnomAD |
|
|
rs146262464 CA266553383 |
402 | G>C | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs146262464 CA266553384 |
402 | G>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1396696286 CA391197652 |
402 | G>V | No |
ClinGen gnomAD |
|
|
rs767304692 CA7387268 |
403 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391197641 rs1595282444 |
404 | R>S | No |
ClinGen Ensembl |
|
|
rs1451101973 CA391197644 |
404 | R>T | No |
ClinGen TOPMed |
|
|
CA391197635 rs774826544 |
405 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774826544 CA7387266 |
405 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764832274 CA7387265 |
406 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391197627 rs1193523778 |
407 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs776134188 CA7387263 |
408 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391197606 rs1359858914 |
410 | S>F | No |
ClinGen gnomAD |
|
|
CA7387262 rs769694291 |
410 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA391197591 rs1595282352 |
413 | D>A | No |
ClinGen Ensembl |
|
|
rs914734429 CA266553353 |
413 | D>E | No |
ClinGen TOPMed |
|
|
CA391197582 rs781342971 |
414 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA7387259 rs771169144 |
414 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA266553349 rs771169144 |
414 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7387260 rs781342971 |
414 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA391197567 rs1272018075 |
415 | L>F | No |
ClinGen gnomAD |
|
|
rs138505320 CA7387258 |
416 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7387256 rs754858305 |
418 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391197532 rs754858305 |
418 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 422 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1447477202 CA391197489 |
422 | G>R | No |
ClinGen TOPMed |
|
|
CA7387253 rs143878116 |
425 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA266553323 rs376686999 |
428 | R>C | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs587734150 CA7387251 |
428 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1020302194 CA266553315 |
429 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1020302194 CA391197389 |
429 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA391197343 rs1219041748 |
432 | S>P | No |
ClinGen gnomAD |
|
|
CA7387249 rs751315824 |
435 | S>I | No |
ClinGen ExAC gnomAD |
|
|
CA391197300 rs751315824 |
435 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA391197283 rs1273587534 |
436 | S>T | No |
ClinGen gnomAD |
|
|
CA7387247 rs373313979 |
437 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7387245 rs373313979 |
437 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7387246 rs373313979 |
437 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 438 | P>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391197267 rs1595282005 |
438 | P>T | No |
ClinGen Ensembl |
|
|
CA7387244 rs759572410 |
439 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA7387216 rs756767517 |
440 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1385091601 CA391196511 |
440 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1237159568 CA391196484 |
441 | A>V | No |
ClinGen gnomAD |
|
|
CA7387214 rs777250460 |
445 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 447 | L>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7387213 rs758037474 |
448 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1239793063 CA391196209 |
451 | G>C | No |
ClinGen gnomAD |
|
|
CA391196215 rs1239793063 |
451 | G>S | No |
ClinGen gnomAD |
|
|
rs752337983 CA7387212 |
451 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA266552503 rs1036196706 |
452 | I>V | No |
ClinGen Ensembl |
|
|
rs1400157627 CA391196183 |
453 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1400157627 CA391196184 |
453 | D>N | No |
ClinGen TOPMed |
|
|
CA7387211 rs765617683 |
454 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA391196129 rs1566804710 |
456 | E>A | No |
ClinGen Ensembl |
|
|
CA7387210 rs755399571 |
457 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA391196098 rs1377764746 |
457 | I>S | No |
ClinGen gnomAD |
|
|
CA391196075 rs1299511716 |
459 | R>T | No |
ClinGen TOPMed |
|
|
rs1333350668 CA391195514 |
461 | I>L | No |
ClinGen TOPMed |
|
|
CA7387152 rs781693558 |
463 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs777982660 CA7387149 |
468 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs777982660 CA7387150 |
468 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA7387148 rs758618155 |
468 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA391195320 rs758618155 |
468 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA266551917 rs587665642 COSM1133435 |
469 | V>M | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes NCI-TCGA gnomAD |
|
rs765389823 CA7387146 |
471 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs750155382 CA7387144 |
472 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7387143 rs767395481 |
473 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1444719760 CA391195051 |
479 | A>T | No |
ClinGen gnomAD |
|
|
rs1335183362 CA391195014 |
480 | E>* | No |
ClinGen gnomAD |
|
|
rs984424260 CA266551895 |
480 | E>D | No |
ClinGen TOPMed |
|
|
CA391195022 rs1335183362 |
480 | E>K | No |
ClinGen gnomAD |
|
|
CA391195020 rs1335183362 |
480 | E>Q | No |
ClinGen gnomAD |
|
|
rs775078603 CA7387138 |
483 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138486604 CA7387137 |
483 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs775078603 CA7387139 |
483 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA266551798 rs748715266 |
487 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA7387111 rs772736621 |
487 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1566803347 CA391194863 |
487 | E>K | No |
ClinGen Ensembl |
|
|
CA391194745 rs772736621 |
487 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA266551795 rs370180074 |
488 | K>E | No |
ClinGen gnomAD |
|
|
CA7387109 rs778847334 |
490 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA391194646 rs1566803055 |
492 | I>T | No |
ClinGen Ensembl |
|
|
rs1340049804 CA391194659 |
492 | I>V | No |
ClinGen gnomAD |
|
|
rs147106237 CA391194635 |
493 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs768847257 CA7387108 |
493 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs768847257 CA391194641 |
493 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs147106237 CA7387107 |
493 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1010088936 CA266551784 |
494 | K>E | No |
ClinGen TOPMed |
|
|
CA7387105 rs757001528 |
495 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7387104 rs34254291 |
497 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1260915920 CA391194529 |
498 | L>F | No |
ClinGen TOPMed |
|
|
rs200287805 CA7387101 |
499 | G>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA391194492 rs758305859 |
499 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758305859 CA7387102 |
499 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1393535600 CA391194486 |
500 | I>V | No |
ClinGen TOPMed |
|
|
CA391194383 rs1347107682 |
505 | K>Q | No |
ClinGen TOPMed |
|
|
CA391193935 rs1331981866 |
506 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA7387068 rs776839032 |
507 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA7387067 rs747996320 |
510 | C>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7387066 rs747996320 |
510 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391193866 rs1595262472 |
511 | K>R | No |
ClinGen Ensembl |
|
|
CA391193856 rs1183617977 |
512 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA391193852 rs749231735 |
512 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA7387063 rs749231735 |
512 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA391193850 rs1237080721 |
513 | R>G | No |
ClinGen gnomAD |
|
|
rs371669872 CA7387062 |
513 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1368682 CA391193849 rs1237080721 |
513 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA391193821 rs1373866612 |
516 | I>V | No |
ClinGen TOPMed |
|
|
rs1489457427 CA391193811 |
517 | Q>E | No |
ClinGen gnomAD |
|
|
rs755690704 CA7387061 |
518 | A>T | No |
ClinGen ExAC |
|
|
CA266550958 rs773655999 |
520 | T>S | No |
ClinGen Ensembl |
|
|
rs1315588255 CA391193765 COSM1152693 |
521 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA391193751 rs1435396451 |
522 | R>K | No |
ClinGen TOPMed |
|
|
CA391193736 rs1305139622 |
523 | E>A | No |
ClinGen TOPMed |
|
|
rs1363122742 CA391193725 |
524 | A>T | No |
ClinGen gnomAD |
|
|
CA7387056 rs764418659 |
525 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs1401661546 CA391193712 |
525 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA391193716 rs764418659 |
525 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1360927871 CA391193709 |
526 | E>K | No |
ClinGen gnomAD |
|
|
rs1057518259 RCV000414286 CA16042930 |
527 | K>N | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1433496551 CA391193679 |
528 | M>I | No |
ClinGen gnomAD |
|
| rs868673013 | 533 | K>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs765229827 CA7387053 |
533 | K>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 535 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391193570 rs1479039852 |
536 | S>C | No |
ClinGen gnomAD |
|
|
CA266550929 rs200027756 |
536 | S>N | No |
ClinGen 1000Genomes |
|
|
CA7387052 rs759621566 |
536 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs1294916798 CA391193547 |
537 | K>Q | No |
ClinGen TOPMed |
|
|
CA391193465 rs376948887 |
541 | S>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376948887 CA7387051 |
541 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371981699 CA7387049 VAR_035723 |
542 | V>M | Variant assessed as Somatic; 0.0 impact. a colorectal cancer sample; somatic mutation [NCI-TCGA, UniProt] | No |
ClinGen UniProt ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA391193409 rs200784595 |
544 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7387047 rs200784595 |
544 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1566800918 CA391193401 |
545 | G>S | No |
ClinGen Ensembl |
|
|
CA391193390 rs1270959342 |
546 | L>F | No |
ClinGen gnomAD |
|
|
rs749184438 CA7387046 |
546 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs1277337087 CA391193386 |
547 | S>G | No |
ClinGen gnomAD |
|
|
CA7387043 rs745405662 |
549 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1393811662 CA391193344 |
550 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs751231414 CA7387041 |
550 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751231414 CA7387040 |
550 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391193336 rs753140640 |
551 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7387038 rs758692793 |
551 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs753140640 CA7387037 |
551 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391193310 rs1193416914 |
552 | G>D | No |
ClinGen gnomAD |
|
|
rs1427090158 CA391193282 |
553 | S>R | No |
ClinGen gnomAD |
|
|
CA266550876 rs759572291 |
554 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759572291 CA7387035 |
554 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391193260 rs1318165701 |
555 | H>Y | No |
ClinGen TOPMed |
|
|
CA266550870 rs900910330 |
558 | D>H | No |
ClinGen Ensembl |
|
|
rs900910330 CA391193204 |
558 | D>N | No |
ClinGen Ensembl |
|
|
rs34104348 CA266550864 |
559 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs762606375 CA266550860 |
560 | Q>R | No |
ClinGen gnomAD |
|
|
rs1318191283 CA391193143 |
561 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
COSM1246235 rs773312664 CA7387031 |
562 | E>K | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA391193123 rs1232489333 |
563 | H>D | No |
ClinGen TOPMed |
|
|
rs768440342 CA7387030 |
563 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs768440342 CA391193118 |
563 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA391193093 rs1268667882 |
564 | S>T | No |
ClinGen TOPMed |
|
|
rs188142316 CA266550847 |
565 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA266550844 rs200823645 |
565 | A>V | No |
ClinGen Ensembl |
|
|
CA391193053 rs1368605129 |
567 | A>T | No |
ClinGen gnomAD |
|
|
CA7387028 rs769826839 |
569 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA266550839 rs1042712745 |
570 | L>P | No |
ClinGen gnomAD |
|
|
rs770411283 CA7387026 |
572 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391192963 rs746602408 |
572 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746602408 CA266550828 |
572 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7387024 rs746602408 COSM1587281 |
572 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA266550823 rs867230883 |
573 | R>G | No |
ClinGen Ensembl |
|
|
CA391192952 rs1177171163 |
573 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
CA391192938 rs1454226368 |
574 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA391192934 rs1454226368 |
574 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
rs989494665 CA266550818 |
575 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA7387020 rs372345375 |
576 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1385687561 CA391192869 |
578 | S>G | No |
ClinGen TOPMed |
|
|
CA391192840 rs1288948388 |
579 | R>K | No |
ClinGen TOPMed |
|
|
rs587623336 CA7387018 |
579 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs754400436 CA7387017 |
580 | S>T | No |
ClinGen ExAC |
|
|
rs1226364495 CA391192808 |
581 | G>R | No |
ClinGen TOPMed |
|
|
CA266550796 rs374518014 |
581 | G>V | No |
ClinGen ESP |
|
|
rs969467132 CA266550787 |
586 | T>N | No |
ClinGen Ensembl |
|
|
CA7387016 rs766416241 |
587 | S>G | No |
ClinGen ExAC |
|
|
CA7387015 rs370288579 |
587 | S>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370288579 CA7387014 |
587 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391192732 rs370288579 |
587 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391192713 rs1311335286 |
589 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1282003814 CA391191264 |
594 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1129274 CA7386981 |
594 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs781421657 CA7386979 |
596 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA391191240 rs781421657 |
596 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs757420676 CA391191220 |
598 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA266547482 rs144088839 |
598 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed gnomAD |
|
CA7386978 rs757420676 |
598 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA391191167 rs1409754308 |
600 | P>S | No |
ClinGen Ensembl |
|
|
rs1595229697 CA391191139 |
601 | A>V | No |
ClinGen Ensembl |
|
|
rs1400938924 CA391191093 |
603 | K>* | No |
ClinGen gnomAD |
|
| TCGA novel | 605 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391191033 rs1442201105 |
606 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA391191015 rs1390813602 |
606 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1390813602 CA391191018 |
606 | T>R | No |
ClinGen TOPMed gnomAD |
|
|
rs753542257 CA7386974 |
608 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs587684940 CA7386948 |
609 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1163897489 CA391190713 |
609 | A>P | No |
ClinGen TOPMed |
|
|
rs1280324896 CA391190674 |
611 | L>F | No |
ClinGen gnomAD |
|
|
CA7386947 rs775216395 |
611 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs587631691 CA7386945 |
613 | S>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs587631691 CA7386944 |
613 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA391190597 rs1222659078 |
614 | S>C | No |
ClinGen gnomAD |
|
|
CA391190594 rs1222659078 |
614 | S>F | No |
ClinGen gnomAD |
|
|
CA391190605 rs1418012598 |
614 | S>P | No |
ClinGen gnomAD |
|
|
CA7386943 rs771530522 |
615 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA391190588 rs1162055314 |
615 | P>S | No |
ClinGen TOPMed |
|
|
rs1415235108 CA391190557 |
616 | T>I | No |
ClinGen gnomAD |
|
|
rs777985024 CA7386941 |
617 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA7386939 rs200441045 |
618 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1595225354 CA391190506 |
619 | A>T | No |
ClinGen Ensembl |
|
|
CA266547072 rs918237567 |
620 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
CA391190493 rs918237567 |
620 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs755827110 CA7386937 |
622 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA7386936 rs750188424 |
623 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA266547065 rs900012691 |
623 | R>K | No |
ClinGen Ensembl |
|
|
CA266547061 rs1054510567 |
624 | P>L | No |
ClinGen TOPMed |
|
|
rs1183813909 CA391190419 |
624 | P>T | No |
ClinGen gnomAD |
|
|
rs1380786450 CA391190398 |
625 | Q>R | No |
ClinGen TOPMed |
|
|
rs139275410 CA7386935 |
626 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7386934 rs146244626 |
626 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1261803592 CA391190350 |
627 | V>M | No |
ClinGen gnomAD |
|
|
CA7386933 rs751566984 |
628 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs763449903 CA7386932 |
630 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1354353528 CA391190266 |
631 | S>N | No |
ClinGen gnomAD |
|
|
CA7386929 CA391190252 rs587599512 |
632 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs777504331 CA7386926 COSM3689992 |
634 | V>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA7386925 rs761258238 |
637 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199836794 CA7386918 |
639 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs768902283 CA7386920 |
639 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA7386921 rs369638144 |
639 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs377051978 CA7386917 |
640 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391190102 rs1263125046 |
640 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA391190074 rs746894924 |
641 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391190081 rs1485144260 |
641 | E>K | No |
ClinGen gnomAD |
|
|
rs777792289 CA7386915 |
642 | A>D | No |
ClinGen ExAC |
|
|
rs1213732385 CA391190063 |
642 | A>S | No |
ClinGen gnomAD |
|
|
rs867200059 CA266547015 |
643 | D>N | No |
ClinGen Ensembl |
|
|
rs1333737006 CA391190022 |
644 | E>K | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 645 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs967041522 CA266547004 |
645 | E>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 645 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA266546997 rs1014529944 |
647 | P>A | No |
ClinGen TOPMed |
|
|
rs1294842500 CA391189879 |
647 | P>L | No |
ClinGen gnomAD |
|
|
CA391189899 rs1014529944 |
647 | P>T | No |
ClinGen TOPMed |
|
|
CA266546982 rs752216291 |
648 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391189822 CA7386906 rs754661662 |
649 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374437687 CA7386907 |
649 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391189812 rs1441701111 |
650 | E>* | No |
ClinGen gnomAD |
|
|
rs753610440 CA7386905 |
650 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1427007876 CA391189800 |
651 | D>Y | No |
ClinGen TOPMed |
|
|
CA7386899 rs773543425 |
652 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA7386900 rs202049411 CA7386901 |
652 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA266546959 rs587640821 |
653 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA |
|
rs765555953 CA266546953 |
654 | P>L | No |
ClinGen TOPMed |
|
|
rs762277413 CA7386897 COSM1587283 |
654 | P>S | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA7386896 rs774478565 |
655 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1240194313 CA391189692 |
656 | V>I | No |
ClinGen TOPMed |
|
|
CA391189668 rs1260960883 |
657 | S>I | No |
ClinGen TOPMed |
|
|
CA7386894 rs749448384 |
658 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1480722699 CA391189614 |
660 | Q>P | No |
ClinGen gnomAD |
|
|
CA7386892 rs190807676 |
661 | M>I | No |
ClinGen 1000Genomes ExAC |
|
|
CA7386891 rs139994197 |
662 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1566790749 CA391189535 |
662 | M>T | No |
ClinGen Ensembl |
|
|
CA391189513 rs1313929335 |
663 | G>S | No |
ClinGen gnomAD |
|
|
CA391189480 rs1304027177 |
664 | S>N | No |
ClinGen gnomAD |
|
|
CA7386890 rs587679014 |
665 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA266546933 rs997516597 |
665 | N>S | No |
ClinGen TOPMed |
|
|
CA391189428 rs1370314500 |
666 | D>N | No |
ClinGen gnomAD |
|
|
CA391189176 rs1595221690 |
667 | Y>C | No |
ClinGen Ensembl |
|
|
CA391189129 rs1320545704 |
668 | G>D | No |
ClinGen TOPMed |
|
|
rs1296074428 CA391189121 |
669 | C>G | No |
ClinGen gnomAD |
|
|
rs150636332 CA7386862 |
669 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391189086 rs1475950756 |
670 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs763487127 CA7386859 |
672 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs587727146 CA266546613 |
674 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA266546622 rs961496670 |
674 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA266546625 rs752747979 |
674 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752747979 CA7386858 |
674 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759797649 CA7386856 |
675 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776720599 CA7386855 |
676 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391188915 rs1414500747 |
677 | Y>C | No |
ClinGen TOPMed gnomAD |
1 associated diseases with Q92994
[MIM: 616202]: Cerebellofaciodental syndrome (CFDS)
An autosomal recessive disorder characterized by cerebellar hypoplasia, delayed development and intellectual disability, as well as facial dysmorphic features, short stature, microcephaly, and dental anomalies. {ECO:0000269|PubMed:25561519}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- An autosomal recessive disorder characterized by cerebellar hypoplasia, delayed development and intellectual disability, as well as facial dysmorphic features, short stature, microcephaly, and dental anomalies. {ECO:0000269|PubMed:25561519}. Note=The disease is caused by variants affecting the gene represented in this entry.
No regional properties for Q92994
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q92994 | |||
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| transcription factor TFIIIB complex | A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIB contains the TATA-binding protein (TBP) and two Pol III-specific proteins, B'' and BRF. |
| transcription preinitiation complex | A protein-DNA complex composed of proteins binding promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| metal ion binding | Binding to a metal ion. |
| RNA polymerase III general transcription initiation factor activity | A general transcription initiation factor activity that contributes to transcription start site selection and transcription initiation of genes transcribed by RNA polymerase III. Factors required for RNA polymerase III transcription initiation include TFIIIA, TFIIIB and TFIIIC. RNA polymerase III transcribes genes encoding short RNAs, including tRNAs, 5S rRNA, U6 snRNA, the short ncRNA component of RNases P, the mitochondrial RNA processing (MRP) RNA, the signal recognition particle SRP RNA, and in higher eukaryotes a number of micro and other small RNAs, though there is some variability across species as to whether a given small noncoding RNA is transcribed by RNA polymerase II or RNA polymerase III. |
| RNA polymerase III type 3 promoter sequence-specific DNA binding | Binding to a sequence of DNA that is a part of a type 3 promoter that controls transcription by RNA polymerase III (Pol III). A type 3 Pol III promoter is composed of elements upstream of the transcription start site, including a TATA box. The human U6 snRNA gene has a type 3 promoter. Type 3 Pol III promoters have not been observed in S. cerevisiae. |
| TBP-class protein binding | Binding to a member of the class of TATA-binding proteins (TBP), including any of the TBP-related factors (TRFs). |
7 GO annotations of biological process
| Name | Definition |
|---|---|
| DNA-templated transcription initiation | The initial step of transcription, consisting of the assembly of the RNA polymerase preinitiation complex (PIC) at a gene promoter, as well as the formation of the first few bonds of the RNA transcript. Transcription initiation includes abortive initiation events, which occur when the first few nucleotides are repeatedly synthesized and then released, and ends when promoter clearance takes place. |
| positive regulation of transcription by RNA polymerase III | Any process that activates or increases the frequency, rate or extent of transcription mediated by RNA polymerase III. |
| rRNA transcription | The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template. |
| transcription by RNA polymerase III | The synthesis of RNA from a DNA template by RNA polymerase III, originating at an RNAP III promoter. |
| transcription initiation at RNA polymerase III promoter | A transcription initiation process that takes place at a RNA polymerase III gene promoter. Transfer RNAs (tRNA) genes, as well as some other non-coding RNAs, are transcribed by RNA polymerase III. |
| transcription preinitiation complex assembly | The aggregation, arrangement and bonding together of proteins on promoter DNA to form the transcriptional preinitiation complex (PIC), required for transcription. |
| tRNA transcription | The synthesis of transfer RNA (tRNA) from a DNA template. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MTGRVCRGCG | GTDIELDAAR | GDAVCTACGS | VLEDNIIVSE | VQFVESSGGG | SSAVGQFVSL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DGAGKTPTLG | GGFHVNLGKE | SRAQTLQNGR | RHIHHLGNQL | QLNQHCLDTA | FNFFKMAVSR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| HLTRGRKMAH | VIAACLYLVC | RTEGTPHMLL | DLSDLLQVNV | YVLGKTFLLL | ARELCINAPA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| IDPCLYIPRF | AHLLEFGEKN | HEVSMTALRL | LQRMKRDWMH | TGRRPSGLCG | AALLVAARMH |
| 250 | 260 | 270 | 280 | 290 | 300 |
| DFRRTVKEVI | SVVKVCESTL | RKRLTEFEDT | PTSQLTIDEF | MKIDLEEECD | PPSYTAGQRK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| LRMKQLEQVL | SKKLEEVEGE | ISSYQDAIEI | ELENSRPKAK | GGLASLAKDG | STEDTASSLC |
| 370 | 380 | 390 | 400 | 410 | 420 |
| GEEDTEDEEL | EAAASHLNKD | LYRELLGGAP | GSSEAAGSPE | WGGRPPALGS | LLDPLPTAAS |
| 430 | 440 | 450 | 460 | 470 | 480 |
| LGISDSIREC | ISSQSSDPKD | ASGDGELDLS | GIDDLEIDRY | ILNESEARVK | AELWMRENAE |
| 490 | 500 | 510 | 520 | 530 | 540 |
| YLREQREKEA | RIAKEKELGI | YKEHKPKKSC | KRREPIQAST | AREAIEKMLE | QKKISSKINY |
| 550 | 560 | 570 | 580 | 590 | 600 |
| SVLRGLSSAG | GGSPHREDAQ | PEHSASARKL | SRRRTPASRS | GADPVTSVGK | RLRPLVSTQP |
| 610 | 620 | 630 | 640 | 650 | 660 |
| AKKVATGEAL | LPSSPTLGAE | PARPQAVLVE | SGPVSYHADE | EADEEEPDEE | DGEPCVSALQ |
| 670 | |||||
| MMGSNDYGCD | GDEDDGY |