Q8NG08
Gene name |
HELB |
Protein name |
DNA helicase B |
Names |
hDHB |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:92797 |
EC number |
3.6.4.12: Acting on ATP; involved in cellular and subcellular movement |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
2 structures for Q8NG08
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 7XV1 | X-ray | 180 A | B | 496-519 | PDB |
| AF-Q8NG08-F1 | Predicted | AlphaFoldDB |
900 variants for Q8NG08
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs772339747 CA6673047 |
2 | A>V | No |
ClinGen ExAC |
|
|
rs1439085415 CA385620871 |
3 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1184119335 CA385620874 |
3 | R>M | No |
ClinGen gnomAD |
|
| TCGA novel | 4 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385620878 rs1386612737 |
4 | S>P | No |
ClinGen gnomAD |
|
|
CA385620887 rs1592626855 |
5 | S>T | No |
ClinGen Ensembl |
|
|
CA6673049 rs142161059 |
6 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs142161059 CA385620894 |
6 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6673048 rs780706106 |
6 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA385620904 rs1463145217 |
8 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs762270423 CA6673052 |
10 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs1164428090 CA385620947 |
14 | P>L | No |
ClinGen TOPMed |
|
|
rs770460070 CA6673053 |
16 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA6673054 rs774101313 |
18 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA238315264 rs544188657 |
20 | D>G | No |
ClinGen 1000Genomes gnomAD |
|
|
CA238315260 rs1033681931 |
20 | D>Y | No |
ClinGen Ensembl |
|
|
CA238315267 rs746773113 |
25 | D>E | No |
ClinGen TOPMed |
|
|
CA238315265 rs887557336 |
25 | D>G | No |
ClinGen Ensembl |
|
|
rs201715919 CA6673057 |
27 | D>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs958904641 CA238315271 |
27 | D>G | No |
ClinGen Ensembl |
|
|
CA385621026 rs1255986603 |
27 | D>Y | No |
ClinGen gnomAD |
|
|
rs898918753 CA238315280 |
32 | D>G | No |
ClinGen TOPMed |
|
|
CA6673060 rs764112092 |
33 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1026799705 CA238315284 |
33 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs757111101 CA6673062 |
34 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6673063 rs778994416 |
35 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750744999 CA6673064 |
39 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs758702075 CA6673065 |
40 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA385621132 rs1390627487 |
42 | I>M | No |
ClinGen gnomAD |
|
|
rs747108792 CA6673067 |
45 | E>* | No |
ClinGen ExAC |
|
|
CA6673068 rs755402051 |
45 | E>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 46 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385621176 rs1276510575 |
49 | S>G | No |
ClinGen gnomAD |
|
|
CA6673071 rs770250410 |
51 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs770250410 CA385621193 |
51 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA6673072 rs148579722 |
55 | G>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA385621229 rs1325535063 |
57 | L>F | No |
ClinGen TOPMed |
|
|
CA385621237 rs1191114536 |
58 | P>R | No |
ClinGen gnomAD |
|
|
CA385621235 rs1488971375 |
58 | P>S | No |
ClinGen gnomAD |
|
|
CA385621241 rs1172565312 |
59 | G>E | No |
ClinGen TOPMed |
|
|
rs908254290 CA238315355 |
59 | G>R | No |
ClinGen gnomAD |
|
|
rs774929641 CA6673077 |
60 | C>F | No |
ClinGen ExAC |
|
|
CA385621246 rs1592627064 |
60 | C>G | No |
ClinGen Ensembl |
|
|
rs760205901 CA238315371 |
61 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673078 rs760205901 |
61 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763903259 CA6673079 |
63 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA6673103 rs746474668 |
64 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs746474668 CA385621284 |
64 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs151139963 CA6673104 |
65 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs776014114 CA6673105 |
66 | C>F | No |
ClinGen ExAC gnomAD |
|
|
rs1336108233 CA385621291 |
66 | C>R | No |
ClinGen TOPMed |
|
|
CA6673107 rs765111862 |
70 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA385621329 rs1450640249 |
71 | Q>* | No |
ClinGen gnomAD |
|
|
rs1239094944 CA385621333 |
71 | Q>H | No |
ClinGen gnomAD |
|
|
rs773103209 CA6673108 |
71 | Q>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 73 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6673109 rs762883213 |
74 | C>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385621351 rs762883213 |
74 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766686609 CA6673110 |
74 | C>W | No |
ClinGen ExAC gnomAD |
|
|
CA385621357 rs1379813708 |
74 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA385621377 rs1165035887 |
75 | K>R | No |
ClinGen gnomAD |
|
|
CA385621435 rs1408195569 |
78 | G>A | No |
ClinGen gnomAD |
|
|
rs574972143 CA6673111 |
79 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385621446 rs1404917747 |
79 | R>H | No |
ClinGen gnomAD |
|
|
rs1329371846 CA385621475 |
81 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs549613910 CA6673112 |
81 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA385621515 rs1308405757 |
84 | G>S | No |
ClinGen gnomAD |
|
|
rs756592255 CA6673115 |
85 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA6673116 rs756592255 |
85 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs888066538 CA385621549 |
86 | W>* | No |
ClinGen gnomAD |
|
|
rs888066538 CA238316433 |
86 | W>C | No |
ClinGen gnomAD |
|
|
rs1006417020 CA238316437 |
88 | R>T | No |
ClinGen Ensembl |
|
|
rs757663918 CA6673118 |
89 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs779681184 CA6673119 |
92 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779681184 CA385621630 |
92 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA238316446 rs897963553 |
94 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs997622110 CA238316449 |
101 | S>N | No |
ClinGen gnomAD |
|
|
rs997622110 CA385621812 |
101 | S>T | No |
ClinGen gnomAD |
|
|
CA6673122 rs780707427 |
102 | Y>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 102 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385621869 rs1472624936 |
103 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1366793447 CA385621853 |
103 | Q>K | No |
ClinGen gnomAD |
|
|
rs867716279 CA238316461 |
104 | Y>C | No |
ClinGen Ensembl |
|
| TCGA novel | 106 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1402239603 CA385621921 |
107 | Q>* | No |
ClinGen gnomAD |
|
|
rs201128308 CA6673125 COSM304524 |
110 | P>L | large_intestine Variant assessed as Somatic; 4.619e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA gnomAD |
|
CA6673126 rs201128308 |
110 | P>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs375900424 CA6673130 |
111 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs551475760 CA6673131 |
112 | Y>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA385622037 rs1565634491 |
112 | Y>D | No |
ClinGen Ensembl |
|
|
rs760707214 CA6673133 |
114 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs764558355 CA6673134 |
115 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 117 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6673135 rs754396716 |
117 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA238316499 rs979736063 |
117 | D>Y | No |
ClinGen gnomAD |
|
|
rs368958419 CA6673136 |
118 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA385622269 rs1483902902 |
119 | S>* | No |
ClinGen gnomAD |
|
|
CA6673138 rs750778913 |
121 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs750778913 CA385622307 |
121 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs754623133 CA385622406 |
124 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673140 rs780749687 |
125 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs376823726 CA6673142 |
126 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6673141 rs372138618 |
126 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA385622451 rs1416139407 |
126 | I>V | No |
ClinGen TOPMed |
|
|
rs991961371 CA238316538 |
127 | C>F | No |
ClinGen TOPMed |
|
|
CA385622621 rs1377989101 |
131 | L>F | No |
ClinGen gnomAD |
|
|
CA6673143 rs777849853 |
131 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs757912663 CA6673144 |
134 | C>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA385622736 rs1400115296 |
135 | E>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 138 | S>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385622788 rs749169621 |
138 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673145 rs749169621 |
138 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs534225971 CA6673146 |
139 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA238316551 rs145082582 |
139 | D>N | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1193909623 CA385622835 |
140 | D>G | No |
ClinGen TOPMed |
|
|
rs774145912 CA6673147 |
140 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1295385334 CA385622868 |
141 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA385622893 rs1427620189 |
142 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs759277660 CA6673148 |
143 | K>N | No |
ClinGen ExAC gnomAD |
|
|
COSM942642 rs1313125769 CA385622918 |
143 | K>T | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1160933635 CA385622937 |
144 | F>I | No |
ClinGen Ensembl |
|
|
rs1344861791 CA385622965 |
145 | L>* | No |
ClinGen gnomAD |
|
|
CA385623004 rs1265337698 |
147 | W>G | No |
ClinGen gnomAD |
|
|
CA385623000 rs1265337698 |
147 | W>R | No |
ClinGen gnomAD |
|
|
rs775619811 CA6673150 |
148 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs201203344 CA238316557 |
149 | K>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201203344 CA6673151 |
149 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA385623068 rs1267859908 |
150 | E>V | No |
ClinGen gnomAD |
|
|
rs764097774 CA385623112 |
153 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA6673152 rs764097774 |
153 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs930703922 CA238316563 |
153 | N>S | No |
ClinGen TOPMed |
|
|
rs753931590 CA6673153 |
154 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1173650703 CA385623130 |
154 | Y>H | No |
ClinGen gnomAD |
|
|
rs762260958 CA6673154 |
156 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 161 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6673158 rs767185039 |
161 | N>S | No |
ClinGen ExAC |
|
|
rs758740137 CA6673157 |
161 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
rs373750935 CA6673159 |
163 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1388906382 CA385623315 |
163 | R>K | No |
ClinGen gnomAD |
|
|
CA6673160 rs755831953 |
163 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA6673161 rs374165848 |
164 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs745651654 CA6673165 |
169 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs757218932 CA6673164 |
169 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA6673163 rs757218932 |
169 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA6673168 rs747180572 |
172 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs35605829 VAR_043855 CA6673167 |
172 | E>K | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs35605829 CA385623633 |
172 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs747180572 CA6673169 |
172 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1454370198 CA385623670 |
173 | T>N | No |
ClinGen gnomAD |
|
|
rs889214867 CA385623684 |
174 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA238316631 rs889214867 |
174 | G>E | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 180 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385623938 rs1266328782 |
182 | T>R | No |
ClinGen gnomAD |
|
|
CA238316635 rs148900779 |
183 | Q>R | No |
ClinGen ESP TOPMed gnomAD |
|
| TCGA novel | 186 | Q>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6673171 rs761924990 |
187 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs113658249 CA6673172 |
189 | L>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1253394814 CA385624114 |
190 | F>L | No |
ClinGen TOPMed |
|
|
VAR_043856 CA6673173 rs4430553 |
191 | L>P | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs4430553 CA385624121 |
191 | L>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs763373645 CA6673174 |
192 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA385624145 rs1318125053 |
193 | N>D | No |
ClinGen gnomAD |
|
|
CA385624152 rs1217296847 |
193 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs766587389 CA6673175 |
195 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751984172 CA6673176 |
198 | P>S | No |
ClinGen ExAC |
|
|
CA238316675 rs1051934339 |
203 | I>V | No |
ClinGen Ensembl |
|
|
CA385625358 rs1353626652 |
206 | R>S | No |
ClinGen TOPMed |
|
|
rs987725301 CA238317165 |
207 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA6673199 rs761379717 |
207 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1255841617 COSM340387 CA385625385 |
208 | V>I | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1210705598 CA385625457 |
211 | A>V | No |
ClinGen gnomAD |
|
|
rs1366843551 CA385625502 |
213 | Q>P | No |
ClinGen TOPMed |
|
|
rs749974699 CA6673201 |
214 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA6673203 rs780083932 |
215 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385625525 rs780083932 |
215 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673202 rs758231002 COSM694741 |
215 | P>S | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs138235805 CA6673205 |
217 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6673206 rs781388173 |
218 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA6673208 rs748305229 |
221 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA6673207 rs748305229 |
221 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs747014610 CA238317201 |
223 | V>F | No |
ClinGen Ensembl |
|
|
rs1351017496 CA385625709 |
225 | L>M | No |
ClinGen TOPMed |
|
|
COSM1363685 CA6673209 rs370199105 |
227 | R>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs370199105 CA385625744 |
227 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6673210 COSM942645 rs138859028 |
227 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA6673211 rs374113325 |
228 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1053182900 CA238317217 |
230 | K>R | No |
ClinGen Ensembl |
|
| TCGA novel | 233 | I>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1474945297 CA385625972 |
233 | I>T | No |
ClinGen TOPMed |
|
|
CA385625963 rs1402071628 |
233 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs775045720 CA6673212 |
234 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772628710 CA6673214 |
235 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs113022875 CA6673213 |
235 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA691063080 rs1388505625 |
236 | G>* | No |
ClinGen TOPMed |
|
|
CA385626076 rs1310320063 |
239 | E>A | No |
ClinGen gnomAD |
|
| TCGA novel | 239 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1006741835 CA238317225 |
240 | M>I | No |
ClinGen TOPMed |
|
| TCGA novel | 241 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs149561017 CA6673215 |
241 | L>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 243 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761326986 CA6673216 |
243 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA385626201 rs1489106532 |
244 | I>V | No |
ClinGen gnomAD |
|
|
CA6673218 rs749873732 |
247 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673219 rs762577023 |
249 | G>D | No |
ClinGen ExAC |
|
|
CA238317246 rs761330880 |
250 | T>I | No |
ClinGen gnomAD |
|
|
CA385626379 rs761330880 |
250 | T>K | No |
ClinGen gnomAD |
|
|
CA6673220 rs776965102 |
252 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 253 | W>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6673222 rs147255627 |
255 | L>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs147255627 CA385626539 |
255 | L>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA385626630 rs1434954833 |
259 | K>E | No |
ClinGen TOPMed |
|
|
rs752401595 CA6673244 |
263 | R>I | No |
ClinGen ExAC gnomAD |
|
|
CA385626980 rs1378959325 |
265 | W>* | No |
ClinGen gnomAD |
|
| TCGA novel | 265 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6673245 VAR_043857 rs35138454 RCV000967279 |
267 | L>F | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs563944682 CA6673246 |
268 | L>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs528289213 CA6673247 COSM1363686 |
269 | R>* | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
TCGA novel CA385627036 rs1042772360 |
269 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA238318727 rs1042772360 |
269 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1292527345 CA385627057 |
270 | C>F | No |
ClinGen gnomAD |
|
|
rs757553870 CA6673249 |
270 | C>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673248 rs757553870 |
270 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1467389948 CA385627066 |
271 | E>K | No |
ClinGen gnomAD |
|
|
rs745979225 CA6673250 |
272 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA385627156 rs1239346838 |
274 | W>C | No |
ClinGen gnomAD |
|
|
CA6673251 rs540342351 |
275 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 276 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6673252 rs370311569 |
276 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA238318748 rs1056915636 |
284 | L>I | No |
ClinGen Ensembl |
|
|
rs368271317 CA6673254 |
287 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA385627459 rs1415448747 |
291 | E>G | No |
ClinGen gnomAD |
|
| TCGA novel | 292 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385627515 rs1460748366 |
294 | A>T | No |
ClinGen gnomAD |
|
|
CA385627581 rs1402375986 |
297 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
rs914826175 CA238318757 |
300 | R>I | No |
ClinGen TOPMed |
|
|
CA6673257 rs770594549 |
300 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA385627681 rs1327665699 |
303 | Q>E | No |
ClinGen gnomAD |
|
|
CA385627708 rs1340524037 |
304 | I>T | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 305 | C>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385627711 rs1246579233 |
305 | C>R | No |
ClinGen gnomAD |
|
|
CA385627727 rs1282096300 |
305 | C>Y | No |
ClinGen gnomAD |
|
| TCGA novel | 306 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs773808619 CA6673258 |
308 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA385627797 rs1333648197 |
308 | D>N | No |
ClinGen gnomAD |
|
|
rs1379632082 CA385627806 |
309 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA6673259 rs759085700 |
310 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA385627834 rs1592632419 |
311 | T>S | No |
ClinGen Ensembl |
|
|
rs372901585 CA238318772 |
312 | Y>H | No |
ClinGen ESP gnomAD |
|
|
rs149629233 CA6673260 |
313 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs760379312 CA6673262 |
314 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA385627907 rs1474963728 |
316 | N>I | No |
ClinGen gnomAD |
|
|
rs1460444163 CA385627938 |
318 | L>S | No |
ClinGen gnomAD |
|
|
rs1425488952 CA385627934 |
318 | L>V | No |
ClinGen gnomAD |
|
|
rs528911976 CA238318793 |
321 | T>I | No |
ClinGen 1000Genomes |
|
|
rs1310486046 CA385627997 |
322 | L>S | No |
ClinGen TOPMed gnomAD |
|
|
rs952568110 CA238318801 |
322 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs753585758 CA6673264 |
324 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA6673266 rs765599639 |
325 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs757502364 CA6673265 |
325 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA238318805 rs533284155 |
325 | H>Y | No |
ClinGen gnomAD |
|
|
rs1251275357 CA385628041 |
326 | M>T | No |
ClinGen gnomAD |
|
|
CA238318816 rs926973997 |
329 | H>L | No |
ClinGen TOPMed |
|
|
rs1191114721 CA385628087 |
330 | A>T | No |
ClinGen TOPMed |
|
|
CA385628102 rs1346255629 |
331 | A>T | No |
ClinGen gnomAD |
|
|
rs1003917263 CA238318820 |
333 | E>G | No |
ClinGen Ensembl |
|
|
rs34614511 CA6673267 |
334 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1485500712 CA385628146 |
335 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA385628141 rs1477185875 |
335 | L>V | No |
ClinGen TOPMed |
|
|
CA238318831 rs1015255902 |
340 | D>G | No |
ClinGen Ensembl |
|
|
rs758612313 CA6673268 |
340 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs780424852 CA6673269 |
342 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 343 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385628224 rs1450391472 |
343 | V>M | No |
ClinGen TOPMed |
|
|
CA6673272 rs755455094 |
345 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs148395216 CA6673274 |
346 | Y>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 350 | C>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs879157264 CA238318888 |
350 | C>Y | No |
ClinGen gnomAD |
|
|
CA238318893 rs921438792 |
351 | V>I | No |
ClinGen gnomAD |
|
|
CA6673275 rs770537589 |
353 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA385628310 rs1332243767 |
355 | D>E | No |
ClinGen gnomAD |
|
|
CA385628304 rs1316598181 |
355 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA385628311 rs1237124573 |
356 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA6673277 rs745367368 |
358 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA385628348 rs1288451262 |
361 | R>K | No |
ClinGen gnomAD |
|
|
CA238318909 rs915361619 |
362 | A>V | No |
ClinGen Ensembl |
|
|
rs760599128 CA6673280 |
363 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1267788399 CA385628364 COSM272767 |
364 | A>T | Variant assessed as Somatic; 0.0001386 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA238318924 rs1037577527 |
365 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
CA6673282 rs774907291 |
365 | F>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761752774 CA6673283 |
366 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs765546598 CA6673284 |
369 | D>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 371 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs763273859 CA6673286 |
372 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA385628437 rs1288714217 |
374 | P>L | No |
ClinGen gnomAD |
|
|
CA385628447 rs1301916946 |
376 | W>* | No |
ClinGen gnomAD |
|
|
CA385628450 rs1370841728 |
376 | W>* | No |
ClinGen gnomAD |
|
|
CA385628457 rs1240978202 |
377 | H>R | No |
ClinGen gnomAD |
|
|
CA385628476 rs1309153688 |
380 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA6673289 rs755473288 |
381 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1265864852 CA385628489 |
382 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA6673291 COSM942649 rs144350290 |
383 | E>K | Variant assessed as Somatic; 9.245e-05 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA6673293 rs151185089 |
385 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1418198396 CA385628534 |
389 | I>V | No |
ClinGen gnomAD |
|
|
rs779565195 CA6673297 |
391 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA385628552 rs1198169182 |
391 | T>I | No |
ClinGen TOPMed |
|
|
rs371956079 CA238318958 |
394 | P>L | No |
ClinGen ESP |
|
|
CA385628567 rs1324527656 |
394 | P>S | No |
ClinGen TOPMed |
|
| TCGA novel | 395 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs746529722 CA6673298 |
395 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs867002472 CA238318964 |
396 | N>D | No |
ClinGen Ensembl |
|
| TCGA novel | 396 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385628589 rs1217523592 |
397 | S>* | No |
ClinGen TOPMed |
|
|
rs1565636615 CA385628597 |
398 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA385628604 rs776770162 |
399 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA238318995 rs1008238574 |
399 | D>G | No |
ClinGen TOPMed |
|
|
rs1012792797 COSM311745 CA238318984 |
399 | D>N | lung Variant assessed as Somatic; 0.0 impact. large_intestine [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1048697145 CA238319014 |
401 | A>T | No |
ClinGen gnomAD |
|
|
rs1329038932 CA385628630 |
403 | N>S | No |
ClinGen TOPMed |
|
|
CA385628640 rs769649903 |
404 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 405 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 406 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1206510365 CA385628666 |
408 | D>H | No |
ClinGen gnomAD |
|
|
rs1230717345 CA385628670 |
408 | D>V | No |
ClinGen gnomAD |
|
|
rs1480041743 CA385628673 |
409 | E>* | No |
ClinGen gnomAD |
|
|
CA385628679 rs1181882011 |
409 | E>D | No |
ClinGen gnomAD |
|
|
rs763218921 CA6673305 |
410 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs759582048 CA6673308 |
413 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1173129388 CA385628769 |
418 | V>I | No |
ClinGen gnomAD |
|
|
CA6673309 rs535502212 |
420 | D>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA238319038 rs888232614 |
421 | T>A | No |
ClinGen TOPMed |
|
|
CA385628815 rs1441595966 |
421 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs888232614 CA238319035 |
421 | T>P | No |
ClinGen TOPMed |
|
| TCGA novel | 423 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6673310 rs145110411 |
423 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA385628864 rs1413148929 |
425 | G>D | No |
ClinGen gnomAD |
|
|
CA385628870 rs1340862923 |
426 | D>N | No |
ClinGen gnomAD |
|
|
CA238319060 rs369545933 |
427 | H>R | No |
ClinGen ESP |
|
|
rs1270819076 CA385628908 |
428 | I>T | No |
ClinGen gnomAD |
|
|
COSM3812798 rs1306787871 CA385628920 |
429 | W>* | breast [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA6673313 COSM3812798 rs754220573 |
429 | W>* | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA605708842 rs1484520655 |
431 | N>PNEISFH* | No |
ClinGen gnomAD |
|
|
CA385628961 rs758025344 |
432 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673314 rs758025344 |
432 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673315 rs779610752 |
432 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA385629020 rs1565636725 |
435 | E>D | No |
ClinGen Ensembl |
|
|
CA6673316 rs374004270 |
436 | I>T | No |
ClinGen ESP ExAC TOPMed |
|
|
rs768121863 CA6673317 |
439 | E>G | No |
ClinGen ExAC |
|
|
CA385629063 rs1478373502 |
439 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA6673318 rs780857773 |
443 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA385629150 rs1418010176 |
444 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA6673319 rs748040801 |
446 | D>N | No |
ClinGen ExAC |
|
|
rs1176950733 CA385629188 |
447 | Q>* | No |
ClinGen gnomAD |
|
|
rs574563220 CA6673321 |
456 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769875630 CA6673320 |
456 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385629411 rs1312531487 |
457 | D>E | No |
ClinGen gnomAD |
|
|
CA238319105 rs954431500 |
457 | D>N | No |
ClinGen TOPMed |
|
|
CA385629398 rs954431500 |
457 | D>Y | No |
ClinGen TOPMed |
|
|
rs141151295 CA6673322 |
458 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs771160040 CA6673323 |
459 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA6673325 rs762166934 |
461 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1219729586 CA385629507 |
462 | L>V | No |
ClinGen gnomAD |
|
|
CA6673326 CA385629581 COSM942651 rs759655454 |
464 | M>I | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD NCI-TCGA |
| TCGA novel | 464 | M>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 466 | C>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767428730 CA6673327 |
466 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs777924309 CA385629652 |
467 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs777924309 CA238319127 |
467 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA6673329 rs775555709 |
473 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs966836203 CA238319154 |
476 | K>E | No |
ClinGen Ensembl |
|
|
rs978121061 CA238319159 |
476 | K>N | No |
ClinGen Ensembl |
|
| TCGA novel | 477 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1397383137 CA385629823 |
477 | G>R | No |
ClinGen gnomAD |
|
|
rs761117792 CA6673332 |
478 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA385629847 rs761117792 |
478 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs992507847 CA238319164 |
479 | C>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1316028317 CA385629900 |
480 | G>E | No |
ClinGen gnomAD |
|
|
CA6673333 rs764613430 |
480 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA385629931 rs1446672350 |
481 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs754167724 CA6673334 |
482 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1327885421 CA385629976 |
484 | I>V | No |
ClinGen gnomAD |
|
|
rs766053942 CA6673336 |
485 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1309273966 CA385630586 |
486 | S>G | No |
ClinGen gnomAD |
|
|
CA6673337 rs751110567 |
486 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385630589 rs1352482305 |
486 | S>T | No |
ClinGen gnomAD |
|
|
CA6673338 rs754676652 |
487 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs754676652 CA385630593 |
487 | R>G | No |
ClinGen ExAC gnomAD |
|
|
RCV000955447 CA6673339 rs116424321 |
487 | R>H | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1214652997 CA385630596 |
488 | L>I | No |
ClinGen gnomAD |
|
|
CA385630606 rs1255452502 |
489 | F>C | No |
ClinGen TOPMed gnomAD |
|
|
CA385630623 rs1467471785 |
491 | H>R | No |
ClinGen gnomAD |
|
|
rs544123650 CA238323378 |
494 | Q>* | No |
ClinGen 1000Genomes |
|
|
CA238323385 rs920403362 |
499 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1471309475 CA385630687 |
500 | V>L | No |
ClinGen gnomAD |
|
|
rs1592633081 CA385630692 |
501 | K>E | No |
ClinGen Ensembl |
|
| TCGA novel | 503 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771324513 CA238323386 |
503 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs777909098 CA6673343 |
505 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs75770066 CA6673344 |
506 | D>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA385630727 rs1392208970 |
506 | D>N | No |
ClinGen gnomAD |
|
|
rs1336981532 CA385630770 |
511 | Q>R | No |
ClinGen gnomAD |
|
|
CA6673346 rs774199485 |
513 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA6673347 rs746018889 |
515 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA6673349 rs140603418 |
517 | W>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6673348 rs140603418 |
517 | W>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs143713432 CA6673350 |
518 | I>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6673351 rs764560310 |
519 | T>A | No |
ClinGen ExAC TOPMed |
|
|
rs1275433822 CA385630839 |
521 | T>I | No |
ClinGen gnomAD |
|
|
CA238323426 rs148126992 |
522 | E>D | No |
ClinGen ESP |
|
|
rs1333406573 CA385630840 |
522 | E>K | No |
ClinGen gnomAD |
|
|
CA6673353 rs141956990 |
523 | Q>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6673354 rs762390862 |
524 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA385630873 rs1351912855 |
526 | L>P | No |
ClinGen TOPMed |
|
|
rs201414904 CA6673355 |
528 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1460782091 CA385630893 |
529 | D>V | No |
ClinGen Ensembl |
|
|
CA6673358 rs767319374 |
532 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1565636976 CA385630917 |
533 | E>Q | No |
ClinGen Ensembl |
|
|
rs752235269 CA6673359 |
535 | L>M | No |
ClinGen ExAC gnomAD |
|
|
rs1460903093 CA385630943 |
537 | T>A | No |
ClinGen gnomAD |
|
|
rs1168454746 CA385630947 |
537 | T>I | No |
ClinGen gnomAD |
|
|
rs1420459018 CA385630948 |
538 | A>T | No |
ClinGen TOPMed |
|
|
CA6673360 rs148111807 |
538 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA385630960 rs1400700399 |
540 | T>A | No |
ClinGen gnomAD |
|
| TCGA novel | 543 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6673363 rs753650085 |
545 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1407727661 CA385630991 COSM468787 |
545 | G>S | kidney [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA6673364 rs757231594 |
547 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs1192773798 CA385631026 |
550 | K>I | No |
ClinGen TOPMed |
|
|
CA385631037 rs1565637014 |
552 | G>R | No |
ClinGen Ensembl |
|
|
rs1353922749 CA385631050 |
554 | H>Y | No |
ClinGen gnomAD |
|
|
CA605708813 rs1342014039 |
556 | Y>* | No |
ClinGen gnomAD |
|
|
rs772248234 CA6673368 |
556 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs747088876 CA385631070 |
557 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673370 rs747088876 |
557 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA238323500 rs1010297991 |
559 | C>F | No |
ClinGen TOPMed |
|
|
CA385631086 rs1255618366 |
560 | Q>K | No |
ClinGen gnomAD |
|
| TCGA novel | 561 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385631106 rs1379150365 |
561 | V>I | No |
ClinGen TOPMed |
|
|
rs770182351 CA6673391 |
563 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA385631140 rs1271116942 |
565 | F>C | No |
ClinGen TOPMed |
|
|
rs1433381309 CA385631146 |
566 | Y>F | No |
ClinGen TOPMed |
|
|
rs773830259 CA385631152 |
567 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA6673393 rs149157869 |
567 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs773830259 CA6673392 |
567 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs368658274 CA6673396 |
568 | W>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6673397 rs372025740 |
570 | Q>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs999642871 CA6673399 |
571 | T>K | No |
ClinGen TOPMed gnomAD |
|
|
rs753255898 CA6673398 |
571 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673401 rs761434780 |
573 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1565638148 CA385631198 |
574 | T>A | No |
ClinGen Ensembl |
|
|
VAR_061665 CA6673402 rs58589183 |
575 | T>A | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA6673403 rs750296593 |
576 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376315655 CA6673404 |
577 | K>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA385631242 rs1187544981 |
580 | K>T | No |
ClinGen TOPMed |
|
|
CA6673406 rs751387588 |
581 | F>V | No |
ClinGen ExAC gnomAD |
|
|
CA238325191 rs1012478691 |
583 | S>A | No |
ClinGen TOPMed |
|
|
rs755166356 COSM1735148 CA6673407 |
583 | S>L | Variant assessed as Somatic; 0.0 impact. pancreas [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA385631263 rs1361667386 |
584 | V>F | No |
ClinGen gnomAD |
|
|
rs748166709 CA6673409 |
585 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673410 rs756285869 |
585 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA238325216 rs147138112 |
586 | V>G | No |
ClinGen ESP |
|
|
rs1478018193 CA385631275 |
586 | V>I | No |
ClinGen gnomAD |
|
|
CA385631280 rs1443735354 |
587 | L>Q | No |
ClinGen gnomAD |
|
|
rs749751497 CA6673412 |
588 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA238325231 rs959307082 |
592 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1340499727 CA385631333 |
595 | V>A | No |
ClinGen TOPMed |
|
|
rs201633650 CA6673415 |
595 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1273576646 CA385631336 |
596 | S>P | No |
ClinGen gnomAD |
|
|
rs746274671 CA6673416 |
598 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673417 rs146582207 |
599 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs764748383 CA6673421 |
602 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA6673419 rs761222933 |
602 | S>T | No |
ClinGen ExAC |
|
|
CA6673423 rs762838224 |
604 | L>* | No |
ClinGen ExAC |
|
|
CA6673422 rs772731913 |
604 | L>I | No |
ClinGen ExAC |
|
|
rs766347508 CA6673424 |
606 | L>* | No |
ClinGen ExAC |
|
|
rs1463511567 CA385631422 |
609 | E>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 609 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs754862759 CA6673427 |
610 | H>P | No |
ClinGen ExAC gnomAD |
|
|
CA385631433 rs1462576099 |
611 | S>P | No |
ClinGen gnomAD |
|
|
rs1592635972 CA385631443 |
612 | K>R | No |
ClinGen Ensembl |
|
|
CA6673429 rs140308412 |
615 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA385631478 rs149680578 |
617 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs777947796 CA6673431 |
618 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1484448093 CA385631507 |
620 | G>V | No |
ClinGen gnomAD |
|
|
rs76473015 CA6673450 |
621 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs76473015 CA6673451 |
621 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1219997744 CA385631518 |
622 | I>F | No |
ClinGen TOPMed |
|
|
CA385631520 rs1237252180 |
622 | I>N | No |
ClinGen gnomAD |
|
|
CA385631521 rs1237252180 |
622 | I>T | No |
ClinGen gnomAD |
|
|
CA385631540 rs1486508360 |
624 | Q>* | No |
ClinGen gnomAD |
|
|
rs779556828 CA6673452 |
624 | Q>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 624 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385631569 rs1417947182 |
626 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA238325860 rs61753953 |
629 | E>Q | No |
ClinGen Ensembl |
|
|
CA6673453 rs750874492 |
630 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA6673454 rs144507658 |
631 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6673455 rs780427434 |
632 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370596928 CA6673456 |
634 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6673460 rs748795758 |
636 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs769466347 CA6673458 |
636 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA6673459 rs777463984 |
636 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385631699 rs1304987432 |
638 | F>L | No |
ClinGen gnomAD |
|
|
CA238325911 rs148447233 |
640 | T>I | No |
ClinGen ESP |
|
|
rs995534218 CA238325925 |
644 | R>K | No |
ClinGen Ensembl |
|
| TCGA novel | 645 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6673463 rs773861620 |
646 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673465 rs771930143 |
648 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs75324469 CA6673464 RCV000963969 |
648 | I>V | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA385631831 rs1218328856 |
650 | L>I | No |
ClinGen gnomAD |
|
|
CA385631836 rs1246745439 |
650 | L>P | No |
ClinGen gnomAD |
|
|
CA385631840 rs1389683050 |
651 | K>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA385631860 rs1431420373 |
652 | T>I | No |
ClinGen TOPMed |
|
|
rs117680200 CA238325971 |
653 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs764397288 CA6673468 |
654 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs760436338 CA6673467 |
654 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1004772765 CA238325978 |
655 | R>T | No |
ClinGen Ensembl |
|
| TCGA novel | 656 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1477183811 CA385631893 |
656 | A>T | No |
ClinGen gnomAD |
|
|
CA385631899 rs1408924052 |
657 | E>K | No |
ClinGen gnomAD |
|
|
CA6673469 rs754177530 |
658 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs762129088 CA6673470 |
660 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765360177 CA6673471 |
661 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs7137719 CA238325998 |
662 | V>E | No |
ClinGen Ensembl |
|
|
rs1435080810 CA385631964 |
663 | D>G | No |
ClinGen gnomAD |
|
|
CA6673473 rs201815365 |
663 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1435080810 CA385631966 |
663 | D>V | No |
ClinGen gnomAD |
|
|
CA385631959 rs201815365 |
663 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6673474 rs780475854 |
664 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385631987 rs1374995020 |
665 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA6673475 rs751942873 |
665 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs141108737 CA6673476 |
666 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6673504 rs757912300 |
669 | S>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 670 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs143522796 CA6673506 COSM84176 |
671 | R>C | pancreas large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6673507 rs768747696 COSM1991928 |
671 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA6673509 rs748005915 |
674 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA6673510 rs146773809 |
676 | F>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA385632779 rs1226216365 |
677 | D>G | No |
ClinGen gnomAD |
|
|
CA385632793 rs1274211464 |
678 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs763245894 CA6673512 |
681 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1323985913 CA385632854 |
683 | S>T | No |
ClinGen TOPMed |
|
|
rs1303184093 CA385632873 |
684 | D>V | No |
ClinGen TOPMed |
|
|
CA385632939 rs1193847398 |
690 | I>F | No |
ClinGen gnomAD |
|
|
rs1374672971 CA385632942 |
690 | I>T | No |
ClinGen gnomAD |
|
|
CA385632967 rs1167341493 |
692 | I>M | No |
ClinGen gnomAD |
|
|
rs77230379 CA238328078 |
692 | I>N | No |
ClinGen Ensembl |
|
|
CA385632959 rs1447144920 |
692 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1565640115 CA385632982 |
693 | Q>H | No |
ClinGen Ensembl |
|
|
rs1395376822 CA385632969 |
693 | Q>K | No |
ClinGen gnomAD |
|
| TCGA novel | 693 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6673514 rs774515010 |
695 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA6673515 rs759993364 |
696 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA385633024 rs1395770231 |
696 | T>I | No |
ClinGen gnomAD |
|
|
rs1367904502 CA385633032 |
697 | F>C | No |
ClinGen gnomAD |
|
|
rs1448373110 CA385633070 |
700 | V>I | No |
ClinGen TOPMed |
|
|
CA6673517 rs372009796 |
701 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA238328134 rs150421611 |
701 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA385633089 rs1348946502 |
701 | R>T | No |
ClinGen gnomAD |
|
|
CA6673519 rs569173441 |
705 | E>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA238328137 rs1036627594 |
706 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA6673521 rs758082114 |
707 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758082114 CA6673522 |
707 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385633161 rs1463484733 |
707 | A>T | No |
ClinGen gnomAD |
|
|
CA6673523 rs762315935 |
708 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138227394 CA6673524 |
710 | Q>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA385633195 rs138227394 |
710 | Q>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1173559234 CA385633207 |
711 | S>L | No |
ClinGen gnomAD |
|
|
rs765696065 CA6673526 |
712 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA238328184 rs918043482 |
713 | K>E | No |
ClinGen Ensembl |
|
|
rs1048792749 CA238328190 |
716 | H>Y | No |
ClinGen TOPMed |
|
|
rs149173752 CA6673528 |
717 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs769411921 CA6673527 |
717 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1471790195 CA385633293 |
722 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA385633289 rs1414626495 |
722 | S>P | No |
ClinGen gnomAD |
|
|
rs1159097035 CA385633294 |
723 | A>T | No |
ClinGen gnomAD |
|
|
CA385633304 rs1395780565 |
724 | V>G | No |
ClinGen gnomAD |
|
|
CA385633317 rs1180124086 |
726 | T>I | No |
ClinGen TOPMed |
|
|
CA6673537 rs754249949 |
726 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA385633322 rs1390360889 |
727 | L>S | No |
ClinGen gnomAD |
|
|
CA6673539 rs762483871 |
729 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA385633355 rs1290025967 |
732 | N>D | No |
ClinGen gnomAD |
|
|
CA238329976 rs543735430 |
733 | L>V | No |
ClinGen 1000Genomes TOPMed |
|
|
rs994697005 CA238329978 |
734 | Q>E | No |
ClinGen gnomAD |
|
|
rs994697005 CA385633368 |
734 | Q>K | No |
ClinGen gnomAD |
|
|
rs1227505009 CA385633384 |
736 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
CA238329999 rs751289909 |
736 | A>V | No |
ClinGen Ensembl |
|
|
CA385633406 rs1323365474 |
739 | S>* | No |
ClinGen gnomAD |
|
|
CA385633405 rs1323365474 |
739 | S>L | No |
ClinGen gnomAD |
|
|
CA6673540 rs191467977 |
740 | Q>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA385633408 rs191467977 |
740 | Q>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs751101089 CA6673541 |
741 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA385633432 rs1249096540 |
743 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA385633429 rs950503069 |
743 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs950503069 CA238330003 |
743 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1461817849 CA385633471 |
747 | Q>E | No |
ClinGen TOPMed |
|
|
rs901614562 CA238330385 |
749 | C>R | No |
ClinGen TOPMed |
|
|
rs1484548288 CA385633492 |
750 | D>N | No |
ClinGen gnomAD |
|
|
rs772072453 CA6673552 |
754 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1429215486 CA385633527 |
755 | C>G | No |
ClinGen gnomAD |
|
| TCGA novel | 755 | C>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs775561366 CA6673553 |
756 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673554 rs142138223 |
759 | H>L | No |
ClinGen 1000Genomes ExAC |
|
|
CA385633579 rs1592642159 |
762 | G>S | No |
ClinGen Ensembl |
|
|
rs1592642170 CA385633591 |
763 | H>Q | No |
ClinGen Ensembl |
|
|
CA385633589 rs1388626360 |
763 | H>R | No |
ClinGen gnomAD |
|
|
rs1188759950 CA385633587 |
763 | H>Y | No |
ClinGen TOPMed |
|
|
rs769235535 CA6673555 |
765 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs776839568 CA6673556 |
765 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA385633627 rs1440940146 |
767 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA6673578 rs759227736 |
767 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs773737230 CA6673577 |
767 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs1276263412 CA385633643 |
769 | Q>H | No |
ClinGen gnomAD |
|
| TCGA novel | 771 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774836553 CA6673581 |
773 | V>D | No |
ClinGen ExAC gnomAD |
|
|
rs774836553 CA385633669 |
773 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1177225563 CA385633666 |
773 | V>I | No |
ClinGen TOPMed |
|
|
rs968605061 CA238331168 |
775 | G>R | No |
ClinGen Ensembl |
|
|
CA385633688 rs1211096330 |
776 | I>T | No |
ClinGen gnomAD |
|
| TCGA novel | 777 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385633691 rs1266742424 |
777 | G>S | No |
ClinGen gnomAD |
|
|
rs763931667 CA6673584 |
781 | C>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763931667 CA6673583 |
781 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs375704546 CA6673585 |
782 | C>F | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1222307834 CA385633728 |
782 | C>R | No |
ClinGen gnomAD |
|
|
CA6673587 rs750249601 |
783 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1254114075 CA385633746 |
785 | N>D | No |
ClinGen TOPMed |
|
|
CA6673588 rs758587182 |
785 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1156884921 CA385633770 |
788 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA385633767 rs1473427013 |
788 | L>V | No |
ClinGen gnomAD |
|
|
CA6673591 rs143275731 |
790 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA385633788 rs1324952420 |
791 | L>* | No |
ClinGen gnomAD |
|
|
rs781146344 CA6673592 |
793 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA385633798 rs992496895 |
793 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs992496895 CA238331252 |
793 | P>T | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 795 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385633818 rs1274678218 |
796 | I>V | No |
ClinGen gnomAD |
|
|
CA385633833 rs1298676821 |
798 | G>E | No |
ClinGen TOPMed |
|
| TCGA novel | 800 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385633845 rs1351525031 |
800 | Q>E | No |
ClinGen gnomAD |
|
|
CA385633861 rs1287004582 |
802 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
CA6673594 rs779331240 |
802 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA385633879 rs1229017966 |
804 | D>E | No |
ClinGen gnomAD |
|
|
rs915543423 CA238331282 |
804 | D>G | No |
ClinGen TOPMed |
|
|
CA6673595 rs770457329 |
804 | D>N | No |
ClinGen ExAC |
|
|
CA385633894 rs1292084260 |
807 | A>T | No |
ClinGen gnomAD |
|
|
rs1450126411 CA385633905 |
808 | S>T | No |
ClinGen gnomAD |
|
|
CA6673596 rs773684364 |
809 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749722962 CA6673597 |
810 | E>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 811 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs746415381 CA6673598 |
815 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1175581370 CA385633959 |
816 | L>P | No |
ClinGen TOPMed |
|
|
rs761698298 CA6673603 |
818 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776024795 CA6673602 |
818 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673604 rs201332927 |
820 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA385633983 rs1164548301 |
820 | A>P | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 822 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6673605 rs552894297 |
824 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6673606 rs200763833 |
824 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA385634012 rs200763833 |
824 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs779712412 CA238331364 |
825 | D>H | No |
ClinGen gnomAD |
|
|
rs755181246 CA6673609 |
830 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs201511089 CA6673610 |
831 | R>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs369506664 CA6673611 |
831 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA385634063 rs1226007704 |
832 | L>Q | No |
ClinGen TOPMed |
|
|
rs1275626484 CA385634075 |
834 | N>D | No |
ClinGen gnomAD |
|
|
CA6673613 rs778478457 |
834 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1314007547 CA385634081 |
835 | G>R | No |
ClinGen TOPMed |
|
|
rs768261868 CA6673614 |
837 | I>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1442978929 CA385634120 |
840 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA6673647 rs759310437 |
843 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1396653883 CA385634419 |
845 | T>I | No |
ClinGen Ensembl |
|
|
rs1157719474 CA385634458 |
847 | V>A | No |
ClinGen TOPMed |
|
|
CA6673649 rs199887842 |
847 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1405516403 CA385634470 |
848 | T>I | No |
ClinGen TOPMed |
|
|
rs755634023 CA238331884 |
849 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
rs760988570 CA6673650 |
850 | G>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 852 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1388721923 CA385634622 |
854 | S>Y | No |
ClinGen gnomAD |
|
|
CA385634692 rs1321777116 |
856 | T>A | No |
ClinGen gnomAD |
|
|
CA6673652 rs764217559 |
857 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs754001459 CA6673653 |
858 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA385634750 rs1592643748 |
859 | N>S | No |
ClinGen Ensembl |
|
|
rs757749347 CA6673654 |
861 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385634880 rs779338182 |
862 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673655 rs779338182 |
862 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673657 rs758625349 |
864 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs780411301 CA6673658 |
865 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA385634973 rs1370937255 |
866 | T>S | No |
ClinGen TOPMed |
|
|
CA385635057 rs1266176990 |
868 | D>G | No |
ClinGen gnomAD |
|
|
rs1490289025 CA385635070 |
869 | F>L | No |
ClinGen gnomAD |
|
| TCGA novel | 870 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385635116 rs1323632361 |
871 | K>N | No |
ClinGen TOPMed |
|
|
CA6673659 rs747752813 |
873 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385635189 rs1320813430 |
876 | C>* | No |
ClinGen Ensembl |
|
|
CA385635174 rs1436549072 |
876 | C>R | No |
ClinGen Ensembl |
|
|
rs1487393916 CA385635181 |
876 | C>Y | No |
ClinGen gnomAD |
|
|
CA6673661 rs141160603 |
877 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs368474548 COSM194224 CA6673662 |
877 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs368474548 CA385635206 |
877 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs774224675 CA6673665 |
880 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA238331946 rs754355751 |
880 | H>Q | No |
ClinGen Ensembl |
|
| TCGA novel | 882 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745819321 CA6673666 |
883 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1298081782 CA385635299 |
883 | A>V | No |
ClinGen TOPMed |
|
|
rs771702939 CA6673667 |
884 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA385635328 rs1390726830 |
886 | I>V | No |
ClinGen gnomAD |
|
|
rs1251157542 CA385635351 |
887 | H>P | No |
ClinGen gnomAD |
|
|
rs760938641 CA6673669 |
888 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA238336670 rs1031790043 |
891 | G>R | No |
ClinGen TOPMed |
|
| TCGA novel | 892 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201102571 CA6673693 |
893 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs372683245 CA6673695 |
895 | Q>R | No |
ClinGen ESP ExAC TOPMed |
|
|
CA385635502 rs1436566349 |
898 | V>A | No |
ClinGen gnomAD |
|
|
CA385635500 rs1388775892 |
898 | V>F | No |
ClinGen TOPMed gnomAD |
|
|
rs767877148 CA6673697 |
899 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385635517 rs1214417788 |
901 | V>M | No |
ClinGen gnomAD |
|
|
rs1433138155 CA385635526 |
902 | G>E | No |
ClinGen TOPMed |
|
|
rs753370271 CA6673698 |
904 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385635545 rs1314515848 |
905 | G>D | No |
ClinGen gnomAD |
|
|
rs139082430 COSM266662 CA6673700 |
906 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs139082430 CA385635549 |
906 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6673701 rs149917565 |
906 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 906 | R>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1210603208 CA385635558 |
907 | Q>H | No |
ClinGen gnomAD |
|
|
CA6673702 rs758386388 |
909 | W>G | No |
ClinGen ExAC gnomAD |
|
|
CA238336754 rs758386388 |
909 | W>R | No |
ClinGen ExAC gnomAD |
|
|
rs1475203769 CA385635577 |
910 | Q>* | No |
ClinGen gnomAD |
|
|
CA6673703 rs780197039 |
910 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs548647632 CA6673704 |
911 | H>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1431196712 CA385635590 |
912 | V>L | No |
ClinGen gnomAD |
|
|
CA238336793 rs868419269 |
913 | Y>H | No |
ClinGen Ensembl |
|
|
rs1592647427 CA385635597 |
913 | Y>S | No |
ClinGen Ensembl |
|
|
rs959398981 CA238336804 |
914 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA385635602 rs1592647430 |
914 | T>P | No |
ClinGen Ensembl |
|
|
CA385635608 rs781063275 |
915 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673706 rs781063275 |
915 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673708 rs770097014 |
916 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs933994863 CA238336810 |
917 | T>S | No |
ClinGen Ensembl |
|
|
rs1294871454 CA385635623 |
918 | R>W | No |
ClinGen gnomAD |
|
| TCGA novel | 919 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771426839 CA6673711 COSM123564 |
920 | R>C | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1283218484 CA385635637 |
920 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1295570749 CA385635645 |
921 | C>Y | No |
ClinGen TOPMed |
|
|
rs546363211 CA6673713 |
922 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673712 rs546363211 |
922 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767817402 CA6673714 |
922 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA238336859 rs931550559 |
923 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
rs753133796 CA6673715 |
923 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673717 rs754806201 |
924 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs761337598 CA6673716 |
924 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673718 rs369098624 |
926 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs758048496 CA6673719 |
927 | A>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 928 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779714735 CA6673720 |
930 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA385635702 rs1565644271 |
931 | Q>R | No |
ClinGen Ensembl |
|
|
CA6673722 rs754997992 |
933 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673721 rs537042661 |
933 | R>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs780821088 CA6673723 |
934 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs748026827 CA6673724 |
937 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1193227469 CA385635744 |
938 | K>E | No |
ClinGen TOPMed |
|
|
rs904350023 CA238336909 |
938 | K>R | No |
ClinGen Ensembl |
|
| TCGA novel | 939 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1355589780 CA385635763 |
940 | S>N | No |
ClinGen gnomAD |
|
|
CA6673726 rs769897180 CA6673727 |
941 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs749520092 CA6673728 |
942 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs770944311 CA6673729 |
943 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1228908122 CA385635792 |
945 | T>A | No |
ClinGen gnomAD |
|
|
CA238336981 rs774433175 |
946 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6673731 rs774433175 |
946 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673732 rs141338855 |
946 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6673730 rs774433175 |
946 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775693346 CA6673733 |
947 | L>W | No |
ClinGen ExAC |
|
|
rs1592647535 CA385635808 |
948 | K>T | No |
ClinGen Ensembl |
|
|
rs761157237 CA6673734 |
949 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673736 rs764792235 CA6673735 |
950 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1285586474 CA385635842 |
953 | S>G | No |
ClinGen gnomAD |
|
| TCGA novel | 958 | S>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6673739 rs146761912 |
959 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6673741 rs767550787 |
960 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673742 rs140474909 |
960 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs755874929 CA6673743 |
961 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA6673744 rs755874929 |
961 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA238337000 rs369719142 |
961 | P>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA385635896 rs1325206059 |
962 | P>S | No |
ClinGen TOPMed |
|
|
CA6673745 rs541597439 |
964 | D>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6673746 rs757497848 |
965 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1185244 CA6673747 VAR_043858 |
966 | P>L | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA6673748 rs151043633 |
967 | S>Y | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1380918048 CA385635935 |
968 | P>L | No |
ClinGen gnomAD |
|
|
CA6673751 rs747474183 |
969 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747474183 CA238337043 |
969 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776130336 CA6673750 |
969 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA238337049 rs774757165 |
971 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
rs377625321 CA238337051 |
971 | S>R | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs140987785 CA6673752 |
973 | G>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs140987785 CA385635962 |
973 | G>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6673753 rs777167225 |
975 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385635981 rs1274201669 |
976 | G>* | No |
ClinGen TOPMed |
|
|
CA6673755 rs766184863 |
976 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA6673757 rs759155806 |
978 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1025406786 CA385635991 |
978 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1025406786 CA238337065 |
978 | P>T | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 979 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 979 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1276570106 CA385636004 |
980 | T>A | No |
ClinGen TOPMed |
|
|
CA6673759 rs1168312 VAR_043859 |
980 | T>I | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs532858164 CA6673761 |
981 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6673760 rs532858164 |
981 | P>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs779166296 CA6673764 |
983 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385636027 rs1357041693 |
984 | S>F | No |
ClinGen gnomAD |
|
|
CA6673765 rs147917939 |
985 | P>Q | No |
ClinGen ESP ExAC TOPMed |
|
|
rs1298623418 CA385636042 |
987 | P>R | No |
ClinGen gnomAD |
|
|
CA6673768 rs747509975 |
988 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673767 rs780011936 |
988 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs780011936 CA385636045 |
988 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs769082756 CA6673769 |
989 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA6673770 rs777112164 |
990 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA385636054 rs1345688648 |
990 | T>P | No |
ClinGen TOPMed gnomAD |
|
|
CA385636065 rs1460498181 |
991 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs748580081 CA6673771 |
991 | D>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA6673773 rs774078070 |
993 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757512367 CA238337136 |
994 | M>I | No |
ClinGen Ensembl |
|
| TCGA novel | 994 | M>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6673774 rs759121470 |
994 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA385636089 rs1191548367 |
995 | T>K | No |
ClinGen gnomAD |
|
|
CA6673775 rs771558258 |
997 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs973229500 CA238337150 |
998 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA385636117 rs1482159011 |
999 | T>I | No |
ClinGen TOPMed |
|
|
CA6673776 rs774897972 |
1001 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1217393281 CA385636139 |
1002 | E>D | No |
ClinGen TOPMed |
|
|
CA6673778 rs369945825 |
1002 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1216575035 CA385636144 |
1003 | A>D | No |
ClinGen gnomAD |
|
|
rs1321293311 CA385636141 |
1003 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA6673780 rs781585272 |
1005 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673781 rs781585272 |
1005 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs73329073 CA6673785 RCV000973495 |
1013 | F>S | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA385636235 rs1228517924 |
1017 | W>* | No |
ClinGen gnomAD |
|
|
rs1306998906 CA385636240 |
1017 | W>C | No |
ClinGen TOPMed |
|
|
rs1322730970 CA385636233 |
1017 | W>R | No |
ClinGen gnomAD |
|
|
CA6673787 rs751638673 |
1020 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs868455893 CA238337232 |
1021 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1592647763 CA385636269 |
1022 | P>R | No |
ClinGen Ensembl |
|
|
CA238337245 rs1053290135 |
1022 | P>S | No |
ClinGen Ensembl |
|
|
CA6673788 rs755495288 |
1023 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1452561923 CA385636273 |
1023 | D>Y | No |
ClinGen gnomAD |
|
|
rs770222252 CA6673791 |
1024 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748666336 COSM1747201 CA6673790 |
1024 | G>R | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA385636286 rs1365623332 |
1025 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1365623332 CA385636287 |
1025 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
rs778300701 CA6673792 |
1026 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs368164516 CA6673793 |
1027 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6673795 rs771666393 |
1028 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385636303 rs771666393 |
1028 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673796 rs775046593 |
1029 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1188916153 CA385636308 |
1029 | D>H | No |
ClinGen TOPMed |
|
|
rs1297130365 CA385636319 |
1030 | D>G | No |
ClinGen Ensembl |
|
|
rs768578800 CA6673798 |
1032 | P>L | No |
ClinGen ExAC |
|
|
CA6673797 rs760164483 |
1032 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA385636340 rs1309010682 |
1033 | K>N | No |
ClinGen gnomAD |
|
|
CA238337303 rs1013878533 |
1034 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA238337301 rs1013878533 |
1034 | S>W | No |
ClinGen TOPMed gnomAD |
|
|
rs761753504 CA6673800 |
1035 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673801 rs764963038 |
1035 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs149648534 CA6673802 |
1036 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6673804 rs143444957 |
1038 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs143444957 CA6673803 |
1038 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA385636381 rs1592647820 |
1041 | C>Y | No |
ClinGen Ensembl |
|
|
CA385636388 rs1253197709 |
1042 | G>D | No |
ClinGen gnomAD |
|
|
rs1014141896 CA238337331 |
1042 | G>S | No |
ClinGen TOPMed |
|
|
rs568530085 CA6673806 |
1043 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6673810 rs137923675 |
1045 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6673808 rs753202525 |
1045 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1422388590 CA385636416 |
1046 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA6673811 rs749668012 |
1046 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs78610206 CA238337349 |
1047 | E>* | No |
ClinGen Ensembl |
|
|
rs368713751 CA238337358 |
1050 | S>G | No |
ClinGen Ensembl |
|
| TCGA novel | 1050 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385636443 rs1161976813 |
1050 | S>R | No |
ClinGen TOPMed |
|
|
rs376165330 CA6673814 |
1054 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs112802946 CA6673813 |
1054 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385636848 rs769717600 |
1055 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673835 rs769717600 |
1055 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6673836 rs772954417 |
1056 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA385636855 rs1215567219 |
1056 | G>R | No |
ClinGen gnomAD |
|
|
rs1331987788 CA385636859 |
1057 | E>Q | No |
ClinGen TOPMed |
|
| TCGA novel | 1059 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200003330 CA238340786 |
1066 | Q>R | No |
ClinGen TOPMed |
|
|
rs370398244 CA6673840 |
1067 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs961388545 CA238340795 |
1069 | R>I | No |
ClinGen TOPMed |
|
|
CA385636940 rs961388545 |
1069 | R>K | No |
ClinGen TOPMed |
|
|
rs374119549 CA238340797 |
1077 | Q>R | No |
ClinGen ESP TOPMed |
|
|
rs1242835444 CA385637003 |
1078 | L>P | No |
ClinGen gnomAD |
|
|
rs775702143 CA6673843 |
1079 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA6673844 rs764240608 |
1081 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA6673845 rs754242417 |
1082 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1427655751 CA385637029 |
1082 | T>I | No |
ClinGen gnomAD |
|
|
CA6673847 rs765480348 |
1084 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs933263821 CA238340839 |
1087 | T>A | No |
ClinGen Ensembl |
|
|
rs199608348 CA6673848 |
1087 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA385637063 rs199608348 |
1087 | T>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6673849 rs754611664 |
1088 | T>W | No |
ClinGen ExAC gnomAD |
No associated diseases with Q8NG08
10 regional properties for Q8NG08
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | SH3 domain | 6 - 67 | IPR001452 |
| domain | Dedicator of cytokinesis protein 3, DHR2 domain | 1232 - 1623 | IPR026800 |
| domain | C2 DOCK-type domain | 417 - 606 | IPR027007 |
| domain | DOCKER domain | 1225 - 1632 | IPR027357 |
| domain | Dedicator of cytokinesis, N-terminal domain | 70 - 412 | IPR032376 |
| domain | Dedicator of cytokinesis 3, SH3 domain | 10 - 65 | IPR035767 |
| domain | Dedicator of cytokinesis B, C2 domain | 420 - 608 | IPR037811 |
| domain | DOCKER, Lobe A | 1219 - 1343 | IPR046769 |
| domain | DOCKER, Lobe B | 1401 - 1483 | IPR046770 |
| domain | DOCKER, Lobe C | 1526 - 1624 | IPR046773 |
Functions
| Description | ||
|---|---|---|
| EC Number | 3.6.4.12 | Acting on ATP; involved in cellular and subcellular movement |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| site of double-strand break | A region of a chromosome at which a DNA double-strand break has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix. |
6 GO annotations of molecular function
| Name | Definition |
|---|---|
| 5'-3' DNA helicase activity | Unwinding a DNA helix in the 5' to 3' direction, driven by ATP hydrolysis. |
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| ATP hydrolysis activity | Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient. |
| protein-containing complex binding | Binding to a macromolecular complex. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| single-stranded DNA helicase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of single-stranded DNA; drives the unwinding of a DNA helix. |
7 GO annotations of biological process
| Name | Definition |
|---|---|
| cellular response to DNA damage stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism. |
| DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. |
| DNA replication | The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA. |
| DNA replication, synthesis of RNA primer | The synthesis of a short RNA polymer, usually 4-15 nucleotides long, using one strand of unwound DNA as a template; the RNA then serves as a primer from which DNA polymerases extend synthesis. |
| maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript. |
| negative regulation of double-strand break repair via homologous recombination | Any process that stops, prevents, or reduces the frequency, rate or extent of double-strand break repair via homologous recombination. |
| regulation of DNA double-strand break processing | Any process that modulates the frequency, rate or extent of DNA double-strand break processing. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MARSSPYLRQ | LQGPLLPPRD | LVEEDDDYLN | DDVEEDEESV | FIDAEELCSG | GVKAGSLPGC |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LRVSICDENT | QETCKVFGRF | PITGAWWRVK | VQVKPVVGSR | SYQYQVQGFP | SYFLQSDMSP |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PNQKHICALF | LKECEVSSDD | VNKFLTWVKE | VSNYKNLNFE | NLRETLRTFH | KETGRKDQKQ |
| 190 | 200 | 210 | 220 | 230 | 240 |
| PTQNGQEELF | LDNEMSLPLE | NTIPFRNVMT | ALQFPKIMEF | LPVLLPRHFK | WIIGSGSKEM |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LKEIEEILGT | HPWKLGFSKI | TYREWKLLRC | EASWIAFCQC | ESLLQLMTDL | EKNALIMYSR |
| 310 | 320 | 330 | 340 | 350 | 360 |
| LKQICREDGH | TYVEVNDLTL | TLSNHMSFHA | ASESLKFLKD | IGVVTYEKSC | VFPYDLYHAE |
| 370 | 380 | 390 | 400 | 410 | 420 |
| RAIAFSICDL | MKKPPWHLCV | DVEKVLASIH | TTKPENSSDD | ALNESKPDEV | RLENPVDVVD |
| 430 | 440 | 450 | 460 | 470 | 480 |
| TQDNGDHIWT | NGENEINAEI | SEVQLDQDQV | EVPLDRDQVA | ALEMICSNPV | TVISGKGGCG |
| 490 | 500 | 510 | 520 | 530 | 540 |
| KTTIVSRLFK | HIEQLEEREV | KKACEDFEQD | QNASEEWITF | TEQSQLEADK | AIEVLLTAPT |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GKAAGLLRQK | TGLHAYTLCQ | VNYSFYSWTQ | TMMTTNKPWK | FSSVRVLVVD | EGSLVSVGIF |
| 610 | 620 | 630 | 640 | 650 | 660 |
| KSVLNLLCEH | SKLSKLIILG | DIRQLPSIEP | GNLLKDLFET | LKSRNCAIEL | KTNHRAESQL |
| 670 | 680 | 690 | 700 | 710 | 720 |
| IVDNATRISR | RQFPKFDAEL | NISDNPTLPI | SIQDKTFIFV | RLPEEDASSQ | SSKTNHHSCL |
| 730 | 740 | 750 | 760 | 770 | 780 |
| YSAVKTLLQE | NNLQNAKTSQ | FIAFRRQDCD | LINDCCCKHY | TGHLTKDHQS | RLVFGIGDKI |
| 790 | 800 | 810 | 820 | 830 | 840 |
| CCTRNAYLSD | LLPENISGSQ | QNNDLDASSE | DFSGTLPDFA | KNKRDFESNV | RLCNGEIFFI |
| 850 | 860 | 870 | 880 | 890 | 900 |
| TNDVTDVTFG | KRRSLTINNM | AGLEVTVDFK | KLMKYCRIKH | AWARTIHTFQ | GSEEQTVVYV |
| 910 | 920 | 930 | 940 | 950 | 960 |
| VGKAGRQHWQ | HVYTAVTRGR | CRVYVIAEES | QLRNAIMKNS | FPRKTRLKHF | LQSKLSSSGA |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| PPADFPSPRK | SSGDSGGPST | PSASPLPVVT | DHAMTNDVTW | SEASSPDERT | LTFAERWQLS |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| SPDGVDTDDD | LPKSRASKRT | CGVNDDESPS | KIFMVGESPQ | VSSRLQNLRL | NNLIPRQLFK |
| PTDNQET |