Q8NFQ8
Gene name |
TOR1AIP2 (IFRG15, LULL1) |
Protein name |
Torsin-1A-interacting protein 2 |
Names |
Lumenal domain-like LAP1 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:163590 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
3 structures for Q8NFQ8
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 5J1S | X-ray | 140 A | B | 233-470 | PDB |
| 5J1T | X-ray | 140 A | B | 233-470 | PDB |
| AF-Q8NFQ8-F1 | Predicted | AlphaFoldDB |
344 variants for Q8NFQ8
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA1268543 rs141367403 |
3 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1268544 rs141367403 |
3 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1268541 rs769422469 |
5 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs745572608 CA1268540 |
6 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA33690138 rs1049633033 |
6 | L>P | No |
ClinGen TOPMed |
|
|
CA33690132 rs991581607 |
7 | R>G | No |
ClinGen TOPMed |
|
|
rs780838380 CA1268539 |
7 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343572592 rs1157125368 |
9 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs758690735 CA1268538 |
9 | P>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 10 | Q>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs753062169 CA1268537 |
11 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA343572568 rs1265328190 |
11 | E>V | No |
ClinGen gnomAD |
|
|
CA1268519 rs770567211 |
12 | D>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 15 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs907975121 CA33689307 |
16 | D>N | No |
ClinGen Ensembl |
|
|
rs746619363 CA1268517 |
17 | L>* | No |
ClinGen ExAC |
|
|
rs779373936 CA1268516 |
18 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343572391 rs1304027851 |
21 | P>S | No |
ClinGen gnomAD |
|
|
CA343572393 rs1304027851 |
21 | P>T | No |
ClinGen gnomAD |
|
|
CA343572382 COSM316081 rs1571662248 |
22 | S>L | lung [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA343572372 rs1220517560 |
24 | N>S | No |
ClinGen gnomAD |
|
|
CA1268515 rs145359130 |
27 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1282010404 CA343572329 |
29 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA343572302 rs1221340691 |
31 | T>A | No |
ClinGen TOPMed |
|
|
rs1331836786 CA343572297 |
31 | T>I | No |
ClinGen gnomAD |
|
|
CA343572293 rs1352761079 |
32 | I>V | No |
ClinGen gnomAD |
|
|
CA33689270 rs993307715 |
33 | I>T | No |
ClinGen TOPMed |
|
|
rs1433645209 CA343572251 |
35 | S>I | No |
ClinGen gnomAD |
|
|
CA343572249 rs1433645209 |
35 | S>N | No |
ClinGen gnomAD |
|
|
CA343572242 rs1394583180 |
36 | N>D | No |
ClinGen gnomAD |
|
|
rs373975336 CA1268511 |
36 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA343572238 rs373975336 |
36 | N>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs767659348 CA1268510 |
38 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA33689222 rs764412546 |
39 | E>* | No |
ClinGen Ensembl |
|
|
CA343572157 rs1225937807 |
42 | I>N | No |
ClinGen gnomAD |
|
|
rs1377654886 CA343572139 |
44 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA1268508 rs751702177 |
45 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA1268506 rs762776217 |
46 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA1268505 rs151336469 |
47 | C>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs151336469 CA343571964 |
47 | C>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs758990706 CA1268502 |
49 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343571921 rs1370927645 |
51 | K>E | No |
ClinGen gnomAD |
|
|
CA1268501 rs776252918 |
52 | D>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 52 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343571879 rs1466519766 |
53 | H>Y | No |
ClinGen gnomAD |
|
|
CA343571853 rs1374743618 |
54 | Q>* | No |
ClinGen gnomAD |
|
|
CA1268500 rs770315009 |
55 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs904025419 CA33689166 |
56 | V>G | No |
ClinGen Ensembl |
|
|
CA1268499 rs139945443 |
57 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 59 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343571744 rs1401306997 |
61 | P>A | No |
ClinGen TOPMed |
|
|
rs114937221 CA1268498 |
64 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs114937221 CA33689162 |
64 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA343571706 rs1417493209 |
64 | A>V | No |
ClinGen gnomAD |
|
|
CA1268497 rs769022500 |
65 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1438868701 CA343571695 |
66 | T>K | No |
ClinGen TOPMed |
|
|
rs61826282 CA33689154 |
67 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA1268495 rs780574843 |
67 | G>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 68 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1208189359 CA343571667 |
70 | S>L | No |
ClinGen gnomAD |
|
| TCGA novel | 71 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343571637 rs1355234194 |
73 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1312041719 CA343571632 |
73 | P>R | No |
ClinGen TOPMed |
|
|
rs1237908062 CA343571604 |
75 | E>D | No |
ClinGen gnomAD |
|
|
rs1314662095 CA343571570 |
78 | V>A | No |
ClinGen gnomAD |
|
|
CA343571517 rs1354810709 |
82 | P>S | No |
ClinGen gnomAD |
|
|
rs757268800 CA1268491 |
84 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1222751691 CA343571415 |
88 | D>G | No |
ClinGen TOPMed |
|
|
CA1268490 rs751817866 |
88 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs758295893 CA1268488 |
89 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA1268489 rs778071605 |
89 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1451933604 CA343571381 |
90 | N>K | No |
ClinGen gnomAD |
|
|
rs752491114 CA1268487 |
91 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1268486 rs765100630 |
92 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA343571345 rs1453032200 |
92 | Q>R | No |
ClinGen TOPMed |
|
|
rs1255769046 CA343571318 |
93 | S>R | No |
ClinGen gnomAD |
|
|
CA1268485 rs759557017 |
94 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA343571314 rs1221774183 |
94 | F>L | No |
ClinGen TOPMed |
|
|
CA343571293 rs1261854156 |
96 | D>G | No |
ClinGen gnomAD |
|
|
CA343571301 rs1252153906 |
96 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs752007143 CA1268483 |
96 | D>P | No |
ClinGen ExAC |
|
|
rs138587725 CA1268482 |
97 | G>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1268479 rs771673669 |
98 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA1268480 rs772856426 |
98 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA343571251 rs1291151987 |
100 | G>R | No |
ClinGen gnomAD |
|
|
rs770026524 CA1268476 |
101 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA1268477 rs775886374 |
101 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1268475 rs377600126 |
102 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA343571201 rs1393220544 |
103 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA343571174 rs1416171021 |
104 | P>L | No |
ClinGen gnomAD |
|
|
CA343571177 rs1416171021 |
104 | P>R | No |
ClinGen gnomAD |
|
|
CA343571186 rs1461065734 |
104 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 106 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs929769544 CA33689002 |
109 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1202935111 CA343571113 |
109 | G>D | No |
ClinGen gnomAD |
|
|
rs1202935111 CA343571109 |
109 | G>V | No |
ClinGen gnomAD |
|
|
CA343571090 rs1478456281 |
111 | E>* | No |
ClinGen gnomAD |
|
|
CA343571080 rs1571661303 |
111 | E>D | No |
ClinGen Ensembl |
|
|
rs919778741 CA343571071 |
112 | P>H | No |
ClinGen gnomAD |
|
|
CA33688998 rs919778741 |
112 | P>L | No |
ClinGen gnomAD |
|
|
rs1372983351 CA343571074 |
112 | P>S | No |
ClinGen gnomAD |
|
|
CA343571062 rs1038341854 |
113 | L>* | No |
ClinGen TOPMed gnomAD |
|
|
CA33688993 rs1038341854 |
113 | L>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1268760188 CA343571025 |
115 | P>L | No |
ClinGen gnomAD |
|
|
CA1268473 rs112711003 |
116 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA343571006 rs1261633992 |
117 | P>S | No |
ClinGen gnomAD |
|
|
CA343571001 rs1261633992 |
117 | P>T | No |
ClinGen gnomAD |
|
|
rs548916342 CA1268472 |
121 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1271073841 CA343570921 |
122 | S>I | No |
ClinGen gnomAD |
|
|
CA1268471 rs747016311 |
123 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199500621 CA33688979 |
124 | K>E | No |
ClinGen Ensembl |
|
|
rs369872700 CA1268470 |
124 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375587727 CA1268469 |
127 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs752934673 CA1268468 |
128 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1332190430 CA343570816 |
130 | A>T | No |
ClinGen TOPMed |
|
|
rs373555927 CA1268466 |
131 | H>P | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 132 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1238555703 CA343570769 |
134 | S>G | No |
ClinGen TOPMed |
|
|
CA1268465 rs138617443 |
134 | S>R | No |
ClinGen ESP ExAC gnomAD |
|
|
CA343570729 rs1179494579 |
137 | V>E | No |
ClinGen TOPMed |
|
|
rs1231250352 CA343570724 |
138 | A>S | No |
ClinGen TOPMed |
|
|
rs1410863658 CA343570720 |
139 | L>F | No |
ClinGen gnomAD |
|
|
rs1396494825 CA343570712 |
140 | P>S | No |
ClinGen gnomAD |
|
|
rs760263804 CA1268463 |
141 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749891313 CA1268462 |
143 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA1268460 rs566526582 |
144 | S>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA1268457 rs149853908 |
146 | G>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1268458 rs770205390 |
146 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA1268456 rs777222778 |
148 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs747496738 CA1268454 |
153 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA33688929 rs914441089 |
153 | P>S | No |
ClinGen TOPMed |
|
|
CA343570619 rs1346985070 |
155 | T>A | No |
ClinGen gnomAD |
|
|
rs778038876 CA1268453 |
156 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343570610 rs1414919462 |
156 | T>I | No |
ClinGen TOPMed |
|
|
rs772272447 CA1268452 |
157 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA343570602 rs1369122832 |
158 | S>T | No |
ClinGen gnomAD |
|
|
CA1268450 rs779222171 |
159 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs754807579 CA1268449 |
159 | Q>R | No |
ClinGen ExAC |
|
|
CA1268448 rs748996935 |
161 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1416686463 CA343570576 |
162 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1376563121 CA343570556 |
164 | P>L | No |
ClinGen gnomAD |
|
|
CA1268446 rs115350827 |
168 | S>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs375297372 CA1268445 |
168 | S>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs375297372 CA343570532 |
168 | S>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs767083823 CA1268444 |
169 | A>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 171 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1164064935 CA343570514 |
171 | Q>R | No |
ClinGen gnomAD |
|
|
rs367898216 CA1268442 |
173 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA343570463 rs953726788 |
179 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs763610484 CA1268441 |
179 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA33688895 rs953726788 |
179 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA343570458 COSM900321 rs1188835981 |
180 | R>* | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA1268440 rs759963550 |
180 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1268437 rs761331608 |
182 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs748173529 CA1268434 |
184 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748173529 CA1268435 |
184 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773839681 CA1268436 |
184 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1009276802 CA343570436 |
185 | E>K | No |
ClinGen Ensembl |
|
|
rs1009276802 CA33688853 |
185 | E>Q | No |
ClinGen Ensembl |
|
|
CA343570343 rs1164291784 |
187 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA343570315 rs1553234883 |
189 | H>Y | No |
ClinGen Ensembl |
|
|
CA1268412 rs769593556 |
191 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs745619830 CA1268411 |
192 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs1421546963 CA527197757 |
192 | Q>H | No |
ClinGen gnomAD |
|
|
CA343570221 rs1187246510 |
194 | Q>* | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 194 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343570183 rs1475124033 |
195 | K>I | No |
ClinGen gnomAD |
|
| TCGA novel | 195 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1385327701 CA343570166 |
196 | L>F | No |
ClinGen gnomAD |
|
|
rs1215803690 CA343570115 |
200 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA1268410 rs370462599 |
205 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA343570020 rs370462599 |
205 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1326644989 CA343569995 |
206 | T>A | No |
ClinGen TOPMed |
|
|
CA1268409 rs770899401 |
206 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1309841956 CA343569947 |
207 | M>I | No |
ClinGen gnomAD |
|
|
rs560798679 CA1268408 |
207 | M>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1448459421 CA343569886 |
209 | Q>R | No |
ClinGen TOPMed |
|
|
rs757912562 CA1268406 |
210 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1268405 rs752303472 |
214 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs528670266 CA1268404 |
214 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1394731243 CA343569728 |
215 | F>V | No |
ClinGen gnomAD |
|
|
CA343569653 rs1325034941 |
217 | S>R | No |
ClinGen gnomAD |
|
|
CA343569627 rs1396570387 |
218 | Y>C | No |
ClinGen gnomAD |
|
|
rs1298485087 CA343569053 |
220 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA343569004 rs747655128 |
225 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1268388 rs747655128 |
225 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA343569006 rs747655128 |
225 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768473709 CA1268385 |
227 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781734441 CA1268384 |
230 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA343568957 rs1359430634 |
230 | V>L | No |
ClinGen TOPMed |
|
|
CA343568935 rs1421050530 |
232 | A>G | No |
ClinGen gnomAD |
|
|
CA1268383 rs146267795 |
233 | S>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1268382 rs752023380 |
234 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762962227 CA1268380 |
235 | V>E | No |
ClinGen ExAC gnomAD |
|
|
rs199675664 CA1268381 |
235 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1270014293 CA343568891 |
236 | N>S | No |
ClinGen TOPMed |
|
|
CA33686742 rs556184602 |
238 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA gnomAD |
|
CA343568873 rs1212486764 |
238 | Y>N | No |
ClinGen gnomAD |
|
|
CA1268379 rs752868213 |
240 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs765266318 CA1268378 |
240 | S>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 241 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759817666 CA1268377 |
242 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1390591098 CA343568812 |
243 | A>V | No |
ClinGen gnomAD |
|
|
CA343568800 COSM1241841 rs1571652284 |
244 | Q>H | oesophagus [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs770725618 CA1268375 |
244 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1241523427 CA343568793 |
245 | Q>* | No |
ClinGen TOPMed |
|
|
rs1415255197 CA343568763 |
248 | K>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA343568748 rs1193192051 |
248 | K>R | No |
ClinGen TOPMed |
|
|
CA343568701 rs1269829794 |
251 | A>T | No |
ClinGen TOPMed |
|
|
rs760449847 CA1268374 |
251 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343568662 rs1558008472 |
254 | A>D | No |
ClinGen Ensembl |
|
|
rs1455572894 CA343568665 |
254 | A>S | No |
ClinGen gnomAD |
|
|
CA1268370 rs372975072 |
257 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1268369 rs771998135 |
258 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs748013591 CA1268368 |
266 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs774045465 CA1268367 |
269 | Q>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 270 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs768280447 CA1268366 |
272 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA33686666 rs1005548354 |
273 | L>M | No |
ClinGen Ensembl |
|
|
CA1268365 rs150114869 |
276 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs757570661 CA1268363 |
278 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1336730 rs200952880 CA1268364 |
278 | R>W | Variant assessed as Somatic; 0.0003234 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA343568413 rs1571652013 |
280 | F>V | No |
ClinGen Ensembl |
|
|
CA343568398 rs1233850571 |
281 | L>F | No |
ClinGen gnomAD |
|
|
CA1268362 rs747346773 |
282 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA343568336 rs1571651994 |
284 | H>P | No |
ClinGen Ensembl |
|
|
rs777974264 CA1268361 |
286 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA343568295 rs1383987893 |
287 | A>S | No |
ClinGen gnomAD |
|
|
CA343568277 rs1441328014 |
288 | S>C | No |
ClinGen gnomAD |
|
|
CA343568264 rs1571651954 |
289 | N>T | No |
ClinGen Ensembl |
|
|
CA1268360 rs758980121 |
291 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1373001273 CA343568238 |
291 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs942995778 CA33686622 |
296 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs115060694 CA1268358 |
297 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200432465 CA33686613 |
300 | A>V | No |
ClinGen gnomAD |
|
|
rs754061455 CA343568124 |
302 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754061455 CA1268356 |
302 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1639635 CA1268357 rs754992879 |
302 | R>W | stomach [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA1268353 rs773110414 |
306 | E>D | No |
ClinGen ExAC TOPMed |
|
|
rs202169827 CA1268354 |
306 | E>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1558008288 CA343568068 |
307 | T>I | No |
ClinGen Ensembl |
|
|
CA1268352 rs767185491 |
308 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA1268350 rs774421838 |
312 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA33686570 rs1014169325 |
314 | H>L | No |
ClinGen TOPMed gnomAD |
|
|
CA33686571 rs1014169325 |
314 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA33686565 rs891743799 |
315 | V>A | No |
ClinGen Ensembl |
|
|
CA343567986 rs200362981 |
315 | V>F | No |
ClinGen 1000Genomes gnomAD |
|
|
CA33686569 rs200362981 |
315 | V>I | No |
ClinGen 1000Genomes gnomAD |
|
|
rs1282353964 CA343567970 |
316 | A>V | No |
ClinGen gnomAD |
|
|
CA1268349 rs748743703 |
318 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs748743703 CA1268348 |
318 | A>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 318 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1268345 rs745476578 |
321 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343567906 rs1373432810 |
322 | S>C | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 325 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs551590889 CA1268344 |
325 | V>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1461243970 CA343567874 |
325 | V>L | No |
ClinGen gnomAD |
|
|
rs202105260 CA1268343 |
326 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 334 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343567763 rs1447333377 |
335 | R>K | No |
ClinGen gnomAD |
|
|
CA343567752 rs1441169584 |
336 | T>I | No |
ClinGen TOPMed |
|
|
rs779325660 CA1268341 |
337 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1467876261 CA343567735 |
338 | Q>* | No |
ClinGen gnomAD |
|
|
rs753864258 CA1268340 |
338 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA343567732 rs1287403738 |
338 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1339950239 CA343567713 |
340 | S>G | No |
ClinGen gnomAD |
|
|
rs200862426 CA1268338 |
342 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA33686502 rs777385812 |
342 | T>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs139296224 CA33686496 |
343 | V>F | No |
ClinGen ESP |
|
|
rs139296224 CA33686494 |
343 | V>I | No |
ClinGen ESP |
|
|
rs1331241500 CA343567591 |
350 | E>D | No |
ClinGen gnomAD |
|
|
CA1268331 rs771553209 |
353 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1268330 rs775176340 |
354 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA343567493 rs1173896917 |
358 | G>D | No |
ClinGen gnomAD |
|
|
CA1268326 rs772488024 |
361 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA1268323 rs769202039 |
365 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA343567421 rs1183676207 |
365 | H>Y | No |
ClinGen TOPMed |
|
|
CA1268322 rs749765069 |
366 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA33686422 rs961589534 |
366 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA343567381 rs374999774 |
368 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs374999774 CA1268320 |
368 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs984052861 CA33686411 |
369 | S>F | No |
ClinGen Ensembl |
|
|
rs1409214599 CA343567359 |
370 | F>L | No |
ClinGen TOPMed |
|
|
rs751354491 CA1268316 |
373 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763947376 CA1268315 |
373 | G>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 376 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343567316 rs1412377382 |
376 | L>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1312914169 CA343567298 |
378 | F>L | No |
ClinGen gnomAD |
|
|
CA1268311 rs758902433 |
379 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764813441 CA1268312 |
379 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs901703052 CA33686383 |
384 | H>R | No |
ClinGen TOPMed |
|
|
rs760297975 CA1268309 |
386 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs760297975 CA1268308 |
386 | N>T | No |
ClinGen ExAC gnomAD |
|
|
rs769004050 CA1268306 |
388 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1268305 rs749853642 |
390 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs749853642 CA343567216 |
390 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs769925109 CA1268303 |
398 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA343567157 rs1558007837 |
400 | L>P | No |
ClinGen Ensembl |
|
|
CA343567155 rs910195006 |
401 | E>K | No |
ClinGen TOPMed |
|
|
CA33686331 rs910195006 |
401 | E>Q | No |
ClinGen TOPMed |
|
|
CA343567148 rs1558007806 |
402 | E>K | No |
ClinGen Ensembl |
|
|
CA1268298 rs564952440 |
403 | E>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1268299 rs751823108 |
403 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1268295 rs765043995 |
405 | L>* | No |
ClinGen ExAC gnomAD |
|
|
CA343567109 rs1158379736 |
407 | A>V | No |
ClinGen gnomAD |
|
|
CA343567091 rs1387673816 |
410 | G>D | No |
ClinGen gnomAD |
|
|
CA1268293 rs753337635 |
412 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA343567079 rs1476172328 |
412 | R>K | No |
ClinGen gnomAD |
|
|
rs1024129117 CA33686311 |
413 | E>A | No |
ClinGen TOPMed |
|
|
CA1268292 COSM900316 rs151254233 |
414 | T>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA gnomAD |
|
CA1268289 rs529759317 |
419 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA33686284 rs369829929 |
422 | L>F | No |
ClinGen Ensembl |
|
|
rs776099487 CA1268287 |
424 | A>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 426 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1268284 rs545273591 |
428 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1268282 COSM136195 rs538957607 |
429 | S>C | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA343566962 rs538957607 |
429 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1558007642 CA343566960 |
430 | D>N | No |
ClinGen Ensembl |
|
|
rs1271389223 CA343566948 |
431 | T>I | No |
ClinGen gnomAD |
|
|
rs878892483 CA33686255 |
433 | T>I | No |
ClinGen Ensembl |
|
|
CA1268279 rs778071698 |
436 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs201353530 CA1268278 |
438 | M>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs747847369 CA33686237 |
439 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs904203923 CA33686243 |
439 | D>G | No |
ClinGen Ensembl |
|
|
rs778747482 CA1268276 |
442 | K>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1268275 rs754910796 |
444 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs754910796 CA343566861 |
444 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1421783873 CA343566825 |
449 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1421783873 CA343566827 |
449 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs765931861 CA1268273 |
452 | H>P | No |
ClinGen ExAC gnomAD |
|
|
CA33686225 rs200043675 |
452 | H>Y | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA1268271 rs750084058 |
457 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1246439594 CA343566782 |
457 | V>L | No |
ClinGen gnomAD |
|
|
rs1309747150 CA343566767 |
458 | Q>H | No |
ClinGen gnomAD |
|
|
CA1268270 rs200595534 |
461 | S>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA33686200 rs922379694 |
463 | I>M | No |
ClinGen Ensembl |
|
|
rs376004069 CA1268269 |
463 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368274587 CA1268268 |
465 | E>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs760015380 CA1268266 |
465 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368274587 CA343566696 |
465 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368274587 CA1268267 |
465 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1442581603 CA343566675 |
466 | Q>H | No |
ClinGen gnomAD |
|
|
CA343566646 rs1347606809 |
469 | L>F | No |
ClinGen TOPMed |
|
|
CA343566649 rs1347606809 |
469 | L>I | No |
ClinGen TOPMed |
No associated diseases with Q8NFQ8
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| nuclear membrane | Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATPase activator activity | Binds to and increases the activity of an ATP hydrolysis activity. |
| ATPase binding | Binding to an ATPase, any enzyme that catalyzes the hydrolysis of ATP. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| endoplasmic reticulum organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum. |
| membrane organization | A process which results in the assembly, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins. |
| positive regulation of ATP-dependent activity | Any process that activates or increases the rate of an ATP-dependent activity. |
| protein localization to nuclear envelope | A process in which a protein is transported to, or maintained at, a location within a nuclear envelope. |
3 homologous proteins in AiPD
| 10 | 20 | 30 | 40 | 50 | 60 |
| MADSGLREPQ | EDSQKDLEND | PSVNSQAQET | TIIASNAEEA | EILHSACGLS | KDHQEVETEG |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PESADTGDKS | ESPDEANVGK | HPKDKTEDEN | KQSFLDGGKG | HHLPSENLGK | EPLDPDPSHS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PSDKVGRADA | HLGSSSVALP | KEASDGTGAS | QEPPTTDSQE | AQSPGHSSAG | QEGEDTLRRR |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LLAPEAGSHP | QQTQKLEEIK | ENAQDTMRQI | NKKGFWSYGP | VILVVLVVAV | VASSVNSYYS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| SPAQQVPKNP | ALEAFLAQFS | QLEDKFPGQS | SFLWQRGRKF | LQKHLNASNP | TEPATIIFTA |
| 310 | 320 | 330 | 340 | 350 | 360 |
| AREGRETLKC | LSHHVADAYT | SSQKVSPIQI | DGAGRTWQDS | DTVKLLVDLE | LSYGFENGQK |
| 370 | 380 | 390 | 400 | 410 | 420 |
| AAVVHHFESF | PAGSTLIFYK | YCDHENAAFK | DVALVLTVLL | EEETLEASVG | PRETEEKVRD |
| 430 | 440 | 450 | 460 | ||
| LLWAKFTNSD | TPTSFNHMDS | DKLSGLWSRI | SHLVLPVQPV | SSIEEQGCLF |