Q8N1F7
Gene name |
NUP93 (KIAA0095) |
Protein name |
Nuclear pore complex protein Nup93 |
Names |
93 kDa nucleoporin, Nucleoporin Nup93 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:9688 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
8 structures for Q8N1F7
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 5IJN | EM | 2140 A | C/I/O/U | 1-819 | PDB |
| 5IJO | EM | 2140 A | C/I/O/U | 1-819 | PDB |
| 7MW0 | X-ray | 200 A | A | 174-819 | PDB |
| 7MW1 | X-ray | 340 A | A/B | 174-819 | PDB |
| 7PER | EM | 3500 A | C/I/O/U | 1-819 | PDB |
| 7R5J | EM | 5000 A | A0/A1/A2/A3/A4/A5/A6 | 1-819 | PDB |
| 7R5K | EM | 1200 A | A0/A1/A2/A3/A4/A5/A6 | 1-819 | PDB |
| AF-Q8N1F7-F1 | Predicted | AlphaFoldDB |
633 variants for Q8N1F7
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV001029893 CA8068148 RCV002552434 rs140226964 |
207 | D>E | Nephrotic syndrome, type 12 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001029894 CA395983584 rs1596843391 |
252 | M>K | Nephrotic syndrome, type 12 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
VAR_076473 rs145146218 CA357850 RCV001328162 RCV001532324 RCV000210641 |
388 | R>W | Nephrotic syndrome Nephrotic syndrome, type 12 NPHS12; doesnt affect nuclear envelope localization; impairs nuclear pore complex assembly; doesn't abrogate interaction with NUP205; doesn't affect SMAD4 interaction; doesn't affect IPO7 interaction; impairs SMAD4 protein import into nucleus; impairs SMAD4 protein signal transduction [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000210703 rs869320695 |
442 | K>missing | Nephrotic syndrome, type 12 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001004889 rs1596856296 CA395990204 |
488 | H>R | Nephrotic syndrome, type 12 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA395991393 RCV000735740 rs1351580598 |
570 | V>E | Nephrotic syndrome, type 12 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001731974 rs140437118 CA8068539 RCV000911820 |
583 | I>M | Nephrotic syndrome, type 12 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_076474 rs145473779 CA357847 RCV001799635 RCV000210563 RCV001849346 |
591 | G>V | Nephrotic syndrome Nephrotic syndrome, type 12 NPHS12; doesnt affect nuclear envelope localization; doesn't affect nuclear pore complex assembly; doesn't abrogate interaction with NUP205; abrogates SMAD4 interaction; abrogates IPO7 interaction; impairs SMAD4 protein import into nucleus; impairs SMAD4 protein signal transduction [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
CA395993090 RCV000787021 rs1596860697 |
613 | A>P | Nephrotic syndrome, type 12 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
VAR_076475 RCV001849347 rs757674160 RCV000210657 CA357852 |
629 | Y>C | Nephrotic syndrome Nephrotic syndrome, type 12 NPHS12; doesnt affect nuclear envelope localization; doesn't affect nuclear pore complex assembly; doesn't abrogate interaction with NUP205; abrogates SMAD4 interaction; abrogates IPO7 interaction; impairs SMAD4 protein import; impairs SMAD4 protein signal transduction into nucleus; [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
RCV001004891 CA395994205 rs1334928223 |
693 | L>F | Nephrotic syndrome, type 12 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA8067966 rs767196017 |
2 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs370324781 CA281482188 |
5 | G>E | No |
ClinGen ESP TOPMed |
|
|
rs1462530625 CA395965968 |
7 | G>V | No |
ClinGen gnomAD |
|
|
CA8067967 rs749910134 |
10 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA8067968 rs760236486 |
11 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
COSM124893 CA281482204 rs528073782 |
14 | E>K | lung upper_aerodigestive_tract Variant assessed as Somatic; impact. urinary_tract breast [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs1161557773 CA395966075 |
15 | Q>K | No |
ClinGen gnomAD |
|
|
CA395966097 rs1209498979 |
16 | L>R | No |
ClinGen TOPMed |
|
|
rs1458232105 CA395966115 |
18 | A>D | No |
ClinGen gnomAD |
|
|
CA395966112 rs1410179295 |
18 | A>P | No |
ClinGen gnomAD |
|
|
rs1354470170 CA395966151 |
21 | E>* | No |
ClinGen TOPMed |
|
|
rs753815347 CA8067970 |
22 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs778788608 CA8067972 |
26 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA395966242 rs1245226646 |
28 | H>L | No |
ClinGen TOPMed |
|
|
rs368513947 CA8067974 |
31 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8067973 rs752924331 |
31 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA281482232 rs751135135 |
33 | L>S | No |
ClinGen Ensembl |
|
|
rs1227243689 CA395966429 |
39 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA8067978 rs781486427 |
41 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8067980 rs770006120 |
42 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA395966493 rs770006120 |
42 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs781513723 CA281482265 |
42 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs754633729 CA281482270 COSM1218115 |
44 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA8067982 rs146068835 |
44 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs754633729 CA8067981 |
44 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8067983 rs771700263 |
45 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs557498689 CA8067984 |
46 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs760107958 CA8067985 |
46 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765922828 CA281482292 |
50 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8067986 rs765922828 |
50 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8067987 rs34670294 |
50 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA395966585 rs34670294 |
50 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765922828 CA395966583 |
50 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8067989 rs573467287 |
51 | T>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs573467287 CA8067988 |
51 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs144159027 CA8067991 |
55 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs751835590 CA8067993 |
56 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA395966682 rs1325612070 |
57 | D>E | No |
ClinGen gnomAD |
|
| TCGA novel | 58 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA395969538 rs1179549315 |
63 | L>I | No |
ClinGen gnomAD |
|
|
CA281486391 rs1057206361 |
65 | G>W | No |
ClinGen TOPMed gnomAD |
|
|
CA281486396 rs894556665 |
67 | R>L | No |
ClinGen Ensembl |
|
|
CA395969596 rs1431901735 |
67 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs756214659 CA8068015 |
71 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374204452 CA8068016 |
76 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA395969727 rs1448503008 |
76 | Q>L | No |
ClinGen gnomAD |
|
|
rs755282882 CA8068018 |
77 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8068019 rs779278520 |
80 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA8068021 rs770597885 |
84 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1363287465 CA395969870 |
85 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA395969878 rs1567378326 |
86 | T>I | No |
ClinGen Ensembl |
|
|
rs745384289 CA8068023 |
88 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs769436848 CA8068024 |
93 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs769436848 CA8068025 |
93 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA281486441 rs998712469 |
94 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA8068027 rs570069154 |
96 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1487797109 CA395970066 |
96 | T>I | No |
ClinGen gnomAD |
|
|
rs774166568 CA8068028 |
99 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA8068043 rs758758550 |
101 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749311005 CA281480735 |
104 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs372055823 CA8068046 |
107 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1242264387 CA395975201 |
108 | N>D | No |
ClinGen TOPMed |
|
|
rs1180854016 CA395975207 |
108 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1333629024 CA395975259 |
112 | S>F | No |
ClinGen gnomAD |
|
|
CA8068050 rs185914955 |
114 | I>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8068052 COSM2835951 rs367699010 |
115 | E>K | pancreas [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs371252223 CA8068054 |
118 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068053 rs773431678 |
118 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1194456964 CA395977398 |
123 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA8068083 rs751953161 |
123 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8068082 rs751953161 |
123 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766061167 CA8068084 |
125 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA395977512 CA395977515 rs546426628 |
127 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1283083247 CA395977587 |
129 | H>L | No |
ClinGen TOPMed |
|
|
rs1283083247 CA395977577 |
129 | H>P | No |
ClinGen TOPMed |
|
|
rs747730206 CA395977599 |
130 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs747730206 CA395977603 |
130 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747730206 CA8068088 |
130 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs778313837 CA8068087 |
130 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA395977640 rs1332558315 |
132 | S>T | No |
ClinGen TOPMed |
|
|
rs1445498797 CA395977715 |
133 | M>I | No |
ClinGen TOPMed |
|
|
CA8068090 rs149086354 |
133 | M>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA281483275 rs937839410 |
135 | V>F | No |
ClinGen Ensembl |
|
| TCGA novel | 136 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA395977794 rs1296476710 |
137 | W>R | No |
ClinGen gnomAD |
|
|
CA395977857 rs1596819027 |
140 | V>G | No |
ClinGen Ensembl |
|
|
CA395977880 rs1596819051 |
141 | K>R | No |
ClinGen Ensembl |
|
|
CA281483281 rs1054056220 |
143 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs893705058 CA281483285 |
143 | R>Q | No |
ClinGen Ensembl |
|
|
CA395977943 rs1391499415 |
145 | L>V | No |
ClinGen TOPMed |
|
|
CA395977952 rs1174264759 |
146 | H>Y | No |
ClinGen gnomAD |
|
|
CA395977966 rs1397803779 |
147 | T>A | No |
ClinGen TOPMed |
|
|
rs769878224 CA8068095 |
150 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA395978021 TCGA novel rs1402195707 |
152 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen gnomAD |
|
CA395978062 rs1389829048 |
155 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA395978071 rs1397199891 |
155 | A>V | No |
ClinGen TOPMed |
|
|
rs1020610259 CA281483319 |
156 | L>F | No |
ClinGen Ensembl |
|
|
rs1174670372 CA395978085 |
157 | D>N | No |
ClinGen TOPMed |
|
|
rs369482440 CA8068098 |
159 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068099 rs775000713 |
161 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA395978174 rs1324536128 |
163 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs768793718 CA8068116 |
164 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142191056 CA8068117 |
165 | S>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068118 rs762441488 |
165 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs772741119 CA8068119 |
166 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA395981438 rs1266158268 |
170 | V>L | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 173 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA281490061 rs369861910 |
173 | P>S | No |
ClinGen Ensembl |
|
|
CA395981533 rs1346927535 |
174 | G>D | No |
ClinGen gnomAD |
|
|
rs761156791 CA8068121 |
175 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA395981552 rs764790250 |
175 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8068122 rs764790250 |
175 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752401834 CA8068123 |
176 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1185924103 CA395981680 |
180 | N>K | No |
ClinGen gnomAD |
|
|
rs781563574 CA8068124 |
181 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8068126 rs751463195 |
182 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763619675 CA8068125 COSM1176785 |
182 | E>K | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs184256098 CA8068127 |
185 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA281490098 rs966758586 |
186 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
COSM1493659 rs756006928 CA8068130 |
187 | R>Q | kidney [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs189324020 CA8068129 |
187 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1227643625 CA395981863 |
188 | Q>E | No |
ClinGen TOPMed |
|
|
rs201924382 CA8068142 |
192 | Y>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA395982499 rs751048227 |
198 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751048227 CA8068144 |
198 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8068145 rs374284384 |
199 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068146 rs372688438 |
201 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA281494263 rs569608277 |
202 | Q>H | No |
ClinGen 1000Genomes |
|
|
rs1230321236 CA395982590 |
203 | P>R | No |
ClinGen gnomAD |
|
|
CA395982608 rs1300159123 |
204 | N>K | No |
ClinGen gnomAD |
|
|
CA395982637 rs1248104458 |
206 | V>M | No |
ClinGen TOPMed |
|
|
CA395982647 rs1183926625 |
207 | D>N | No |
ClinGen TOPMed |
|
|
CA8068149 rs146924670 |
208 | L>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068151 rs755224828 |
209 | C>F | No |
ClinGen ExAC gnomAD |
|
|
rs753616032 CA8068150 |
209 | C>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8068152 rs779332625 |
210 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA281494271 rs1048948610 |
211 | S>P | No |
ClinGen Ensembl |
|
|
CA281494274 rs79070284 |
212 | V>I | No |
ClinGen 1000Genomes |
|
|
CA395982734 rs567027753 |
213 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs567027753 CA8068156 |
213 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8068155 rs567027753 |
213 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA395982801 rs1312490161 |
216 | D>E | No |
ClinGen TOPMed |
|
|
rs777022774 CA8068160 |
216 | D>N | No |
ClinGen ExAC |
|
|
CA8068161 rs746271983 |
217 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA395982822 rs1162650511 |
218 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA395982826 rs1392173809 |
218 | K>T | No |
ClinGen gnomAD |
|
|
rs1182878018 CA395983056 |
219 | S>N | No |
ClinGen gnomAD |
|
|
CA8068186 rs201948167 |
219 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs374124744 CA8068187 |
220 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1394965064 CA395983096 |
221 | S>C | No |
ClinGen TOPMed |
|
|
CA8068189 rs759345823 |
222 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765149221 CA8068190 |
223 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs752928627 CA8068191 |
225 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs764273449 CA395983187 |
226 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764273449 CA8068193 |
226 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA395983269 rs1411737712 |
230 | M>V | No |
ClinGen gnomAD |
|
|
rs60510831 CA8068195 |
232 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA281494647 rs777072541 |
232 | D>Y | No |
ClinGen Ensembl |
|
|
CA8068196 rs781678161 |
233 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8068197 rs547795592 |
234 | L>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8068198 rs547795592 |
234 | L>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs144804729 CA8068199 |
237 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA395983422 rs1209633397 |
238 | A>T | No |
ClinGen gnomAD |
|
|
CA8068203 rs371279811 |
239 | T>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs35563991 RCV000893831 CA8068204 |
239 | T>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1011648583 CA281494662 |
240 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA8068206 rs375417648 |
242 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA395983502 rs1229649566 |
244 | N>D | No |
ClinGen Ensembl |
|
|
COSM1378482 CA281494668 rs765711298 |
245 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA8068207 rs769894093 |
245 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA281494666 rs765711298 |
245 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA8068209 rs762899574 CA395983538 |
248 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA395983537 rs762899574 |
248 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761897168 CA8068212 |
250 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8068211 rs751738776 |
250 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs767522635 CA8068213 |
251 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370111038 CA8068214 |
251 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370111038 CA395983577 |
251 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756587288 CA8068215 |
252 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA395983580 rs1288227780 |
252 | M>V | No |
ClinGen gnomAD |
|
|
CA395983609 rs1228545144 |
253 | E>D | No |
ClinGen gnomAD |
|
|
rs1343800181 CA395983603 |
253 | E>G | No |
ClinGen gnomAD |
|
|
rs1300851112 CA395983595 |
253 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 257 | Q>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8068216 rs780591538 |
258 | A>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 258 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA281494684 rs953423356 |
260 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA8068217 rs142876740 |
262 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8068219 rs8056371 |
263 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs140028495 RCV000926696 CA8068220 |
264 | Q>E | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA8068222 rs780818925 |
265 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA8068237 rs760807047 |
266 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA8068239 rs754355624 |
268 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766805453 CA8068238 |
268 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
CA395984854 rs779174822 |
270 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA8068241 rs779174822 |
270 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA8068242 rs539652333 |
271 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 271 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1399550429 CA395984886 |
272 | V>A | No |
ClinGen gnomAD |
|
|
CA395984938 rs1389308204 |
275 | F>C | No |
ClinGen TOPMed |
|
|
rs781049860 CA8068244 |
280 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1468059115 CA395985068 |
281 | A>T | No |
ClinGen gnomAD |
|
|
rs1325208147 CA395985120 |
284 | G>R | No |
ClinGen TOPMed |
|
|
CA281495753 rs1016983523 |
287 | P>S | No |
ClinGen gnomAD |
|
|
CA8068245 rs745368411 |
288 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs557645742 CA8068246 |
290 | Y>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA395985248 rs1445441975 |
291 | Q>P | No |
ClinGen gnomAD |
|
|
rs1414796459 CA395985351 |
296 | F>C | No |
ClinGen gnomAD |
|
|
rs773426367 CA395985389 |
298 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773426367 CA8068253 |
298 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA395985419 rs1382363451 |
299 | I>M | No |
ClinGen gnomAD |
|
|
rs139658470 CA281495771 |
303 | A>P | No |
ClinGen ESP |
|
|
rs139658470 CA281495769 |
303 | A>T | No |
ClinGen ESP |
|
|
CA395985473 rs1415757056 |
303 | A>V | No |
ClinGen gnomAD |
|
|
CA281495773 rs971247149 |
304 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA8068258 rs765824089 |
308 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA8068257 rs540294844 |
308 | L>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA395985807 rs1249027349 |
310 | D>Y | No |
ClinGen gnomAD |
|
|
CA395985844 rs1481036739 |
312 | E>K | No |
ClinGen TOPMed |
|
|
CA8068286 rs149714368 |
315 | G>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs149714368 CA8068285 |
315 | G>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA281496153 rs375202262 |
316 | H>Q | No |
ClinGen ESP TOPMed |
|
|
rs780427720 CA281496159 |
319 | W>R | No |
ClinGen Ensembl |
|
|
rs1169955129 CA395986016 |
320 | A>T | No |
ClinGen gnomAD |
|
|
COSM971705 rs1015912856 CA281496162 |
320 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA8068289 rs758148078 |
321 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA395986080 rs1348254795 |
323 | Y>F | No |
ClinGen TOPMed |
|
|
rs367944972 CA281496169 |
323 | Y>H | No |
ClinGen ESP gnomAD |
|
|
rs777511270 CA8068290 |
326 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1324927881 CA395986142 |
326 | M>V | No |
ClinGen gnomAD |
|
|
COSM971707 CA8068291 rs746856372 |
327 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA8068292 rs771130377 |
327 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201285651 CA8068293 |
330 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs993254811 CA281496177 |
330 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs993254811 CA395986239 |
330 | D>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 332 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs145578512 CA8068296 |
334 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1035912830 CA281496188 |
334 | A>V | No |
ClinGen Ensembl |
|
|
CA8068299 rs774840944 |
337 | V>A | No |
ClinGen ExAC |
|
|
CA8068298 rs769330459 |
337 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1190189482 CA395986390 |
338 | V>A | No |
ClinGen gnomAD |
|
|
rs762333192 CA8068300 |
339 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs765875794 CA8068302 |
340 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758920885 CA8068303 |
340 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA281496205 rs992173424 |
343 | H>Q | No |
ClinGen TOPMed |
|
|
CA395986496 rs1163962948 |
344 | Q>* | No |
ClinGen gnomAD |
|
|
rs747413547 CA8068305 |
344 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758307888 CA8068306 |
346 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs777747972 CA8068307 |
347 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs1385913949 CA395986533 |
348 | F>L | No |
ClinGen gnomAD |
|
|
CA395986584 rs1357919370 |
350 | T>N | No |
ClinGen gnomAD |
|
|
rs1293213544 CA395986647 |
354 | E>G | No |
ClinGen gnomAD |
|
| TCGA novel | 355 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8068309 rs757080227 |
356 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA395986724 rs1260970116 |
358 | S>N | No |
ClinGen gnomAD |
|
|
rs1462599763 CA395986766 |
361 | R>G | No |
ClinGen TOPMed |
|
|
rs763952809 CA8068325 |
363 | L>S | No |
ClinGen ExAC gnomAD |
|
|
CA8068326 rs776322514 |
367 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767380960 CA8068328 |
370 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA395987075 rs148421556 |
372 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068330 rs148421556 |
372 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068329 rs750228534 |
372 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA281496541 rs990904998 |
376 | R>C | No |
ClinGen Ensembl |
|
|
rs749310739 CA8068332 COSM1218116 |
376 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
| TCGA novel | 377 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1429129296 CA395987108 |
378 | A>T | No |
ClinGen gnomAD |
|
|
CA395987113 rs1232964272 |
378 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA8068333 rs755118448 |
379 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs755118448 CA395987114 |
379 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA395987136 rs1309196589 |
381 | N>S | No |
ClinGen gnomAD |
|
|
CA395987158 rs1232206728 |
382 | N>K | No |
ClinGen gnomAD |
|
|
CA395987152 rs1205201672 |
382 | N>S | No |
ClinGen gnomAD |
|
|
CA395987167 rs1479565556 |
383 | T>A | No |
ClinGen gnomAD |
|
|
CA395987204 rs1255165295 |
384 | D>E | No |
ClinGen gnomAD |
|
|
CA395987223 rs1454824255 |
385 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1171777265 CA395987270 |
388 | R>Q | No |
ClinGen gnomAD |
|
|
CA281496552 rs1043516453 |
389 | A>T | No |
ClinGen Ensembl |
|
|
rs747390049 CA395987303 |
390 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747390049 CA8068337 |
390 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1328293055 CA395987353 |
392 | C>R | No |
ClinGen gnomAD |
|
|
rs202054532 CA8068338 |
393 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs775129973 CA8068339 |
394 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8068341 rs763617550 |
399 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1567410047 CA395987581 |
401 | D>G | No |
ClinGen Ensembl |
|
|
rs761782738 CA8068343 |
401 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs574840905 CA8068344 |
404 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs150950239 CA8068345 |
404 | S>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs755863852 CA8068346 |
407 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1351843162 CA395987733 |
408 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8068348 rs754132298 |
409 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs373924265 CA8068351 |
411 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068350 rs779103749 |
411 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA281496593 rs779103749 |
411 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1167564416 CA395987833 |
413 | Y>F | No |
ClinGen gnomAD |
|
|
rs1461242749 CA395987874 |
416 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA395988823 rs1451794603 |
420 | Q>K | No |
ClinGen TOPMed |
|
|
CA395988907 rs1567410296 |
423 | F>S | No |
ClinGen Ensembl |
|
|
rs778499994 COSM174803 CA8068379 |
425 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1258868027 CA395988952 |
425 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
CA8068381 rs771500693 |
426 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA395988960 rs771500693 |
426 | D>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs145809568 CA8068382 |
427 | G>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs752997863 CA281496756 |
429 | S>G | No |
ClinGen Ensembl |
|
|
CA8068384 rs771039642 |
430 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA8068385 rs543658965 |
430 | S>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA395989153 rs1436068435 |
435 | L>V | No |
ClinGen gnomAD |
|
|
rs1179842622 CA395989169 |
436 | T>A | No |
ClinGen TOPMed |
|
|
CA395989199 rs1461231450 |
437 | L>H | No |
ClinGen TOPMed |
|
|
rs1374778377 CA395989192 |
437 | L>V | No |
ClinGen gnomAD |
|
| TCGA novel | 438 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 444 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA395989391 rs1330792551 |
445 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs765489399 CA8068387 |
447 | D>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 447 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs377320182 CA8068388 |
448 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068413 rs764428645 |
450 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs756496678 CA8068416 |
454 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs908131101 CA281497128 |
455 | V>L | No |
ClinGen gnomAD |
|
|
rs908131101 CA395989691 |
455 | V>M | No |
ClinGen gnomAD |
|
|
CA395989714 rs1326889933 |
456 | N>S | No |
ClinGen gnomAD |
|
| TCGA novel | 457 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA395989755 rs1596856039 |
458 | Q>H | No |
ClinGen Ensembl |
|
|
CA395989769 rs1596856043 |
459 | P>R | No |
ClinGen Ensembl |
|
|
CA281497144 rs551878889 |
461 | L>F | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA395989792 rs551878889 |
461 | L>V | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1218624805 CA395989809 |
462 | Y>C | No |
ClinGen gnomAD |
|
|
CA395989830 rs1276847328 |
463 | F>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1337454368 CA395989842 |
464 | Q>E | No |
ClinGen gnomAD |
|
|
CA395989858 rs1234255008 |
465 | V>I | No |
ClinGen gnomAD |
|
|
CA8068420 rs754276167 |
467 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA395989896 rs757973283 |
467 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA395989901 rs1261895816 |
468 | L>V | No |
ClinGen gnomAD |
|
|
rs374772646 CA8068422 |
470 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8068426 rs745834053 |
475 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781227869 CA8068425 |
475 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs769810971 CA8068427 |
476 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1290840484 CA395990071 |
479 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1290840484 CA395990073 |
479 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA8068428 rs150449170 |
481 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749167844 CA8068429 |
481 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA395990119 rs1296938699 |
482 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
rs764516342 CA281497190 |
482 | M>T | No |
ClinGen Ensembl |
|
|
CA395990121 rs1296938699 |
482 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA395990155 rs1415790883 |
484 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs528775471 CA8068430 |
484 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1320282274 CA395990161 |
485 | L>M | No |
ClinGen gnomAD |
|
|
CA395990164 rs1240831647 |
485 | L>P | No |
ClinGen gnomAD |
|
|
CA8068431 COSM1378483 rs138281575 RCV000891841 |
486 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs377453680 CA8068432 COSM971713 |
486 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs948147387 CA281497210 |
488 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs761061459 CA8068435 |
488 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1377342963 CA395990224 |
491 | H>D | No |
ClinGen Ensembl |
|
|
rs1364576973 CA395990234 |
491 | H>Q | No |
ClinGen gnomAD |
|
|
rs1161606833 CA395990228 |
491 | H>R | No |
ClinGen gnomAD |
|
|
CA395990237 rs1323026532 |
492 | V>I | No |
ClinGen TOPMed |
|
|
CA395990261 rs1156884372 |
493 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA395990269 rs1416001580 |
494 | L>P | No |
ClinGen gnomAD |
|
|
CA8068441 rs756788020 |
498 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs868189415 CA281497239 |
500 | K>Q | No |
ClinGen Ensembl |
|
|
rs780820701 CA8068443 |
508 | Q>* | No |
ClinGen ExAC |
|
|
CA8068444 rs745421774 |
508 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs17853288 CA281497254 VAR_028160 |
509 | S>R | No |
ClinGen UniProt Ensembl dbSNP |
|
|
CA395990552 rs1237333004 |
511 | Q>H | No |
ClinGen gnomAD |
|
|
rs936514142 CA281497255 |
511 | Q>K | No |
ClinGen Ensembl |
|
|
rs780108547 CA8068446 |
512 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA281497265 rs371478125 |
513 | L>F | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA395990577 rs371478125 |
513 | L>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA8068466 rs148103884 |
516 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1025198458 CA281497705 |
516 | E>K | No |
ClinGen gnomAD |
|
|
rs1002483354 CA281497713 |
517 | P>S | No |
ClinGen Ensembl |
|
|
rs778654547 CA8068467 |
518 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs1368778740 CA395990896 |
521 | P>H | No |
ClinGen TOPMed |
|
|
rs1368778740 CA395990898 |
521 | P>R | No |
ClinGen TOPMed |
|
|
CA8068470 rs777975365 |
521 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA395990894 rs777975365 |
521 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776964186 CA395990947 |
524 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs776964186 CA8068473 |
524 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs771065608 CA8068472 COSM971715 |
524 | R>W | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs141371158 COSM22113 CA8068475 |
525 | R>Q | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
COSM1378485 rs760057496 CA8068474 |
525 | R>W | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs775986098 CA8068476 |
528 | F>V | No |
ClinGen ExAC gnomAD |
|
|
CA395991000 rs1327559660 |
529 | V>A | No |
ClinGen gnomAD |
|
|
rs150762291 CA395990995 |
529 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs150762291 CA8068478 |
529 | V>M | Variant assessed as Somatic; 4.62e-05 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1435168393 CA395991009 |
530 | R>Q | No |
ClinGen gnomAD |
|
|
rs750107617 CA8068479 |
530 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8068480 rs760058517 |
531 | L>H | No |
ClinGen ExAC gnomAD |
|
|
rs1208552333 CA395991042 |
534 | L>P | No |
ClinGen TOPMed |
|
|
CA8068483 rs139671995 |
535 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1277453269 CA395991055 |
536 | T>S | No |
ClinGen gnomAD |
|
|
rs1203947888 CA395991057 |
536 | T>S | No |
ClinGen gnomAD |
|
|
rs374706761 CA8068485 |
537 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068484 rs371707121 |
537 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068487 rs777922313 |
542 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8068488 rs369105159 |
542 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA395991150 rs1388403405 |
545 | R>G | No |
ClinGen TOPMed |
|
|
CA395991153 rs1195079511 |
545 | R>T | No |
ClinGen gnomAD |
|
|
rs781311765 CA8068490 |
548 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1183112863 CA395991193 |
551 | F>L | No |
ClinGen Ensembl |
|
|
rs770464790 CA8068492 |
552 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745995924 CA8068491 |
552 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs770464790 CA8068493 |
552 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8068494 rs749616430 |
554 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs781337673 CA8068509 |
556 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA395991237 rs1334457327 |
556 | D>N | No |
ClinGen gnomAD |
|
|
CA8068510 rs145268951 |
557 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs905390467 CA281497970 |
560 | S>R | No |
ClinGen gnomAD |
|
|
rs369147348 CA8068512 |
560 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA395991302 rs1308436485 |
562 | G>R | No |
ClinGen TOPMed |
|
|
rs749847760 CA8068513 |
564 | N>D | No |
ClinGen ExAC |
|
|
CA395991338 rs1282662745 |
565 | M>V | No |
ClinGen gnomAD |
|
| TCGA novel | 567 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774760575 CA8068515 |
567 | L>P | No |
ClinGen ExAC |
|
|
rs748524706 CA8068516 |
568 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770548557 CA8068517 |
568 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA395991374 rs770548557 |
568 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs1391658765 CA395991382 |
569 | C>S | No |
ClinGen gnomAD |
|
|
rs1413517037 CA395991421 |
572 | E>D | No |
ClinGen TOPMed |
|
|
rs1213693456 CA395991431 |
573 | L>P | No |
ClinGen gnomAD |
|
|
rs1399445253 CA395991484 |
578 | R>* | No |
ClinGen TOPMed |
|
|
CA8068520 rs201617246 |
578 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068521 rs201617246 |
578 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| rs1219979273 | 580 | F>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs780856607 CA8068536 |
581 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8068538 rs769486149 |
582 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745489090 CA8068537 |
582 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1377003104 CA395991603 |
585 | G>E | No |
ClinGen gnomAD |
|
|
rs1328278103 CA395991618 |
586 | K>N | No |
ClinGen TOPMed |
|
|
CA8068540 rs149661645 |
586 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA395991666 rs1596858511 |
590 | D>V | No |
ClinGen Ensembl |
|
|
CA395991678 rs1249889460 |
591 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA281498223 CA8068544 rs376887419 |
594 | K>N | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 596 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1236279110 CA395992873 |
599 | D>G | No |
ClinGen TOPMed |
|
|
rs1278056245 CA395992869 |
599 | D>Y | No |
ClinGen TOPMed |
|
|
CA8068566 rs754164838 |
602 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs888881866 CA281501802 |
606 | K>E | No |
ClinGen Ensembl |
|
|
CA395993011 rs759630879 |
609 | I>S | No |
ClinGen ExAC gnomAD |
|
|
CA8068567 rs759630879 |
609 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs143824696 CA8068568 |
610 | N>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068569 rs752845485 |
611 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1299614557 CA395993109 |
614 | S>A | No |
ClinGen gnomAD |
|
|
CA281501812 rs28576041 |
614 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA8068570 rs28576041 |
614 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1456482066 CA395993117 |
615 | V>M | No |
ClinGen gnomAD |
|
|
CA395993232 rs1236347123 |
622 | F>S | No |
ClinGen TOPMed |
|
|
CA8068571 rs764588833 |
625 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs541498650 CA8068572 |
626 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA395993315 rs1337030004 |
627 | K>Q | No |
ClinGen TOPMed |
|
|
rs762403631 RCV000594163 |
628 | L>missing | No |
ClinVar dbSNP |
|
|
CA395993373 rs1286184985 |
632 | A>T | No |
ClinGen gnomAD |
|
|
rs199678770 CA395993387 |
633 | K>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs199678770 RCV000907305 CA8068576 |
633 | K>Q | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA395993392 rs1214418502 |
633 | K>R | No |
ClinGen gnomAD |
|
|
CA395993445 rs1479157012 |
636 | D>H | No |
ClinGen TOPMed |
|
|
RCV001003822 rs1596861969 CA395993454 |
637 | K>E | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1303353695 CA395993463 |
638 | V>I | No |
ClinGen gnomAD |
|
|
rs562562640 CA8068588 |
641 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764570277 CA8068590 |
642 | M>K | No |
ClinGen ExAC gnomAD |
|
|
rs1238998591 CA395993517 |
644 | K>E | No |
ClinGen gnomAD |
|
|
CA395993516 rs1238998591 |
644 | K>Q | No |
ClinGen gnomAD |
|
|
CA8068591 rs572387059 |
647 | S>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA395993557 rs1269746871 |
648 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1427884930 CA395993561 |
649 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs750817566 CA8068594 |
650 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA395993620 rs1226058283 |
653 | I>M | No |
ClinGen TOPMed |
|
|
rs1467494541 CA395993632 |
654 | S>N | No |
ClinGen gnomAD |
|
|
rs1376327152 CA395993622 |
654 | S>R | No |
ClinGen gnomAD |
|
|
CA8068595 rs371274035 |
654 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068596 rs778696836 |
655 | A>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 655 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA395993647 rs1410925762 |
656 | P>A | No |
ClinGen TOPMed |
|
|
rs758034157 CA8068598 |
656 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1299064324 CA395993680 |
658 | S>F | No |
ClinGen gnomAD |
|
|
CA8068602 rs776231499 |
659 | N>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 659 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs561638940 CA8068603 |
662 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA395993737 rs1258955220 |
662 | R>S | No |
ClinGen gnomAD |
|
|
rs1317460977 CA395993745 |
663 | L>P | No |
ClinGen gnomAD |
|
|
rs1158628594 CA395993756 |
664 | K>R | No |
ClinGen TOPMed |
|
|
rs1455711549 CA395993764 |
665 | N>H | No |
ClinGen TOPMed |
|
|
CA395993774 rs1202679667 |
665 | N>I | No |
ClinGen gnomAD |
|
|
rs1191177546 CA395993793 |
666 | M>I | No |
ClinGen gnomAD |
|
|
CA8068605 rs576474597 |
666 | M>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs576474597 CA8068604 |
666 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1192222864 CA395993796 |
667 | A>T | No |
ClinGen gnomAD |
|
|
CA395993809 rs1267328770 |
668 | L>V | No |
ClinGen gnomAD |
|
| TCGA novel | 670 | I>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1426195129 CA395993837 |
670 | I>T | No |
ClinGen gnomAD |
|
|
rs762996236 CA8068606 |
670 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs938826226 CA281502357 |
671 | A>G | No |
ClinGen Ensembl |
|
| TCGA novel | 671 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8068607 rs764196494 |
672 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs764196494 CA8068608 |
672 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8068609 rs762254899 |
672 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs199837299 CA8068610 |
673 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA395993867 rs1166462755 |
673 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA8068642 rs779847628 |
674 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs749091202 CA281503100 |
680 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs190565265 CA395994073 |
681 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8068644 rs190565265 |
681 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs190565265 CA8068645 |
681 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA395994082 rs1181366087 |
682 | N>D | No |
ClinGen gnomAD |
|
|
CA395994088 rs1381669558 |
682 | N>S | No |
ClinGen gnomAD |
|
|
rs764734498 CA281503126 |
684 | F>L | No |
ClinGen Ensembl |
|
|
CA395994114 rs1389175695 |
684 | F>S | No |
ClinGen TOPMed |
|
|
CA281503132 rs369743924 |
685 | V>M | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA395994125 rs748209131 |
686 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA281503152 rs1012144722 |
686 | D>V | No |
ClinGen Ensembl |
|
|
rs748209131 CA8068646 |
686 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA395994151 rs1295333719 |
688 | T>M | No |
ClinGen gnomAD |
|
|
rs142068906 CA281503172 |
689 | F>I | No |
ClinGen ESP TOPMed |
|
|
CA8068650 rs771357525 |
689 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777069106 CA8068651 |
690 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760045573 CA8068652 |
691 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1379269755 CA395994211 |
694 | D>N | No |
ClinGen gnomAD |
|
|
CA8068655 rs764134014 |
695 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8068656 rs767011232 |
698 | F>V | No |
ClinGen ExAC TOPMed |
|
|
rs1225198785 CA395994262 |
699 | F>L | No |
ClinGen TOPMed |
|
| TCGA novel | 700 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1000580837 CA281503191 |
701 | E>K | No |
ClinGen gnomAD |
|
|
rs1221423360 CA395994312 |
703 | H>R | No |
ClinGen gnomAD |
|
|
rs756017486 CA8068658 |
704 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766227416 CA8068659 |
706 | H>Y | No |
ClinGen ExAC |
|
|
rs1442176633 CA395994387 |
710 | A>D | No |
ClinGen gnomAD |
|
|
rs753621611 CA8068660 |
711 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA395994402 rs1292577738 |
712 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA8068682 rs372514444 |
714 | I>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1466398684 CA395994523 |
715 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
CA395994531 rs1167526618 |
715 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA8068683 rs371055702 |
716 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068684 rs200856369 |
716 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757329145 CA8068685 |
718 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA395994575 rs1403510055 |
720 | V>L | No |
ClinGen gnomAD |
|
|
CA395994627 rs1596864459 |
724 | Q>E | No |
ClinGen Ensembl |
|
|
CA395994631 rs1371544720 |
724 | Q>P | No |
ClinGen TOPMed |
|
|
rs1019115653 CA281503530 |
725 | E>A | No |
ClinGen Ensembl |
|
| TCGA novel | 728 | E>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781755184 CA8068686 |
729 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8068687 rs746335792 |
729 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746335792 CA8068688 |
729 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1209870688 CA395994741 |
732 | A>V | No |
ClinGen gnomAD |
|
|
rs749615414 CA8068690 |
733 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA395994743 rs1489822659 |
733 | A>T | No |
ClinGen gnomAD |
|
|
CA395994761 rs1596864573 |
734 | F>L | No |
ClinGen Ensembl |
|
|
CA8068693 rs771748377 |
735 | R>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1596864595 CA395994796 |
736 | N>K | No |
ClinGen Ensembl |
|
|
CA395994847 rs1204168101 |
740 | E>* | No |
ClinGen TOPMed |
|
|
rs1255991803 CA395995015 |
741 | I>M | No |
ClinGen TOPMed |
|
|
rs552893176 CA281505182 |
741 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA395995020 rs1567415344 |
742 | R>K | No |
ClinGen Ensembl |
|
|
CA8068724 rs762777449 |
744 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1567415377 CA395995064 |
745 | L>F | No |
ClinGen Ensembl |
|
|
rs751390416 CA395995080 |
746 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8068726 rs751390416 |
746 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA395995083 rs1265991235 |
747 | E>Q | No |
ClinGen gnomAD |
|
|
rs1239777742 CA395995096 |
748 | V>M | No |
ClinGen TOPMed |
|
|
rs762067783 CA395995119 |
750 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762067783 CA8068727 |
750 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1303296233 CA395995130 |
751 | A>P | No |
ClinGen gnomAD |
|
|
CA8068728 rs767853364 |
751 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs756316012 CA395995156 |
753 | M>K | No |
ClinGen ExAC gnomAD |
|
|
rs756316012 CA8068730 |
753 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs750524188 CA8068729 |
753 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA395995173 rs1321604156 |
754 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA395995167 rs1240876461 |
754 | N>Y | No |
ClinGen TOPMed |
|
|
rs1200746110 CA395995206 |
756 | L>F | No |
ClinGen gnomAD |
|
|
rs748221967 CA281505214 |
756 | L>S | No |
ClinGen Ensembl |
|
|
rs1596867307 CA395995226 |
758 | T>S | No |
ClinGen Ensembl |
|
|
CA395995239 rs1233591733 |
759 | Q>E | No |
ClinGen gnomAD |
|
|
CA8068731 rs780582794 |
759 | Q>H | No |
ClinGen ExAC |
|
|
CA8068734 rs374313794 |
760 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068732 rs754262847 |
760 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1022882200 CA281505253 |
762 | R>K | No |
ClinGen TOPMed |
|
|
rs545189455 CA8068735 |
763 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs770568073 CA8068736 |
764 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1297353473 CA395995331 |
769 | S>F | No |
ClinGen TOPMed |
|
|
CA8068738 rs745360996 |
769 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs572483425 CA8068739 |
770 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA395995352 rs1381718088 |
773 | R>K | No |
ClinGen TOPMed |
|
|
rs749128803 CA8068741 |
774 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs768650810 CA8068742 |
776 | R>* | No |
ClinGen ExAC gnomAD |
|
|
CA395995371 rs773948257 |
776 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA8068743 rs773948257 |
776 | R>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 778 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs77860880 RCV000966005 CA8068745 |
779 | E>K | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA8068746 rs773614710 |
781 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs147381896 CA8068747 COSM1235527 RCV000895764 |
781 | R>H | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs766323239 CA8068748 |
782 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1216267834 CA395995438 |
783 | S>C | No |
ClinGen TOPMed |
|
|
rs190188561 CA281506608 |
786 | R>* | No |
ClinGen 1000Genomes |
|
|
rs374875893 CA281506615 |
786 | R>Q | No |
ClinGen gnomAD |
|
|
rs1339514575 CA395996571 |
789 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA395996580 rs1194666730 |
790 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs771046738 CA8068791 |
790 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs776961230 CA8068792 |
791 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 794 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1223133203 CA395996667 |
794 | T>S | No |
ClinGen gnomAD |
|
|
CA8068794 rs373453717 |
798 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374916243 CA8068795 |
800 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8068796 rs140923104 |
801 | Y>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs764588936 CA8068797 |
802 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8068798 rs369078681 |
803 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA395997401 rs1304254624 |
804 | S>F | No |
ClinGen gnomAD |
|
|
rs1014812302 CA281506702 |
806 | D>A | No |
ClinGen TOPMed |
|
|
rs376351599 CA281506691 |
806 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376351599 CA8068801 |
806 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA395997468 rs1326597123 |
807 | T>I | No |
ClinGen gnomAD |
|
|
CA395997465 rs1295387773 |
807 | T>S | No |
ClinGen TOPMed |
|
|
rs778511107 CA8068803 |
808 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8068804 rs752264053 |
809 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs769339712 CA281506714 |
810 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs758408999 CA8068805 |
811 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA395997562 rs1389237061 |
812 | V>M | No |
ClinGen TOPMed |
|
|
CA8068806 rs777917068 |
813 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1218436473 CA395997626 |
814 | M>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1324994510 CA395997620 |
814 | M>T | No |
ClinGen TOPMed |
|
|
rs1262152070 CA395997636 |
815 | E>K | No |
ClinGen gnomAD |
|
|
CA8068807 rs746758555 |
816 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1371456489 CA395997671 |
817 | L>F | No |
ClinGen gnomAD |
|
|
CA281506766 rs370139525 |
817 | L>H | No |
ClinGen ESP TOPMed |
|
|
CA8068809 rs780882438 |
818 | M>L | No |
ClinGen ExAC gnomAD |
1 associated diseases with Q8N1F7
[MIM: 616892]: Nephrotic syndrome 12 (NPHS12)
A form of nephrotic syndrome, a renal disease clinically characterized by severe proteinuria, resulting in complications such as hypoalbuminemia, hyperlipidemia and edema. Kidney biopsies show non-specific histologic changes such as focal segmental glomerulosclerosis and diffuse mesangial proliferation. Some affected individuals have an inherited steroid-resistant form and progress to end-stage renal failure. NPHS12 inheritance is autosomal recessive. {ECO:0000269|PubMed:26878725}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A form of nephrotic syndrome, a renal disease clinically characterized by severe proteinuria, resulting in complications such as hypoalbuminemia, hyperlipidemia and edema. Kidney biopsies show non-specific histologic changes such as focal segmental glomerulosclerosis and diffuse mesangial proliferation. Some affected individuals have an inherited steroid-resistant form and progress to end-stage renal failure. NPHS12 inheritance is autosomal recessive. {ECO:0000269|PubMed:26878725}. Note=The disease is caused by variants affecting the gene represented in this entry.
No regional properties for Q8N1F7
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q8N1F7 | |||
Functions
7 GO annotations of cellular component
| Name | Definition |
|---|---|
| centrosome | A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| nuclear envelope | The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space). |
| nuclear membrane | Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space. |
| nuclear periphery | The portion of the nuclear lumen proximal to the inner nuclear membrane. |
| nuclear pore | A protein complex providing a discrete opening in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| structural constituent of nuclear pore | The action of a molecule that contributes to the structural integrity of the nuclear pore complex, a protein-lined channel in the nuclear envelope that allows the transfer of macromolecules. |
7 GO annotations of biological process
| Name | Definition |
|---|---|
| nuclear envelope organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear envelope. |
| nuclear pore complex assembly | The aggregation, arrangement and bonding together of a set of components to form a nuclear pore complex. |
| nucleocytoplasmic transport | The directed movement of molecules between the nucleus and the cytoplasm. |
| poly(A)+ mRNA export from nucleus | The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm. |
| positive regulation of SMAD protein signal transduction | Any process that increases the rate, frequency or extent of SMAD protein signal transduction. Pathway-restricted SMAD proteins and common-partner SMAD proteins are involved in the transforming growth factor beta receptor signaling pathways. |
| protein import into nucleus | The directed movement of a protein from the cytoplasm to the nucleus. |
| SMAD protein signal transduction | The cascade of processes by which a signal interacts with a receptor, causing a change in the activity of a SMAD protein, and ultimately effecting a change in the functioning of the cell. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDTEGFGELL | QQAEQLAAET | EGISELPHVE | RNLQEIQQAG | ERLRSRTLTR | TSQETADVKA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SVLLGSRGLD | ISHISQRLES | LSAATTFEPL | EPVKDTDIQG | FLKNEKDNAL | LSAIEESRKR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| TFGMAEEYHR | ESMLVEWEQV | KQRILHTLLA | SGEDALDFTQ | ESEPSYISDV | GPPGRSSLDN |
| 190 | 200 | 210 | 220 | 230 | 240 |
| IEMAYARQIY | IYNEKIVNGH | LQPNLVDLCA | SVAELDDKSI | SDMWTMVKQM | TDVLLTPATD |
| 250 | 260 | 270 | 280 | 290 | 300 |
| ALKNRSSVEV | RMEFVRQALA | YLEQSYKNYT | LVTVFGNLHQ | AQLGGVPGTY | QLVRSFLNIK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| LPAPLPGLQD | GEVEGHPVWA | LIYYCMRCGD | LLAASQVVNR | AQHQLGEFKT | WFQEYMNSKD |
| 370 | 380 | 390 | 400 | 410 | 420 |
| RRLSPATENK | LRLHYRRALR | NNTDPYKRAV | YCIIGRCDVT | DNQSEVADKT | EDYLWLKLNQ |
| 430 | 440 | 450 | 460 | 470 | 480 |
| VCFDDDGTSS | PQDRLTLSQF | QKQLLEDYGE | SHFTVNQQPF | LYFQVLFLTA | QFEAAVAFLF |
| 490 | 500 | 510 | 520 | 530 | 540 |
| RMERLRCHAV | HVALVLFELK | LLLKSSGQSA | QLLSHEPGDP | PCLRRLNFVR | LLMLYTRKFE |
| 550 | 560 | 570 | 580 | 590 | 600 |
| STDPREALQY | FYFLRDEKDS | QGENMFLRCV | SELVIESREF | DMILGKLEND | GSRKPGVIDK |
| 610 | 620 | 630 | 640 | 650 | 660 |
| FTSDTKPIIN | KVASVAENKG | LFEEAAKLYD | LAKNADKVLE | LMNKLLSPVV | PQISAPQSNK |
| 670 | 680 | 690 | 700 | 710 | 720 |
| ERLKNMALSI | AERYRAQGIS | ANKFVDSTFY | LLLDLITFFD | EYHSGHIDRA | FDIIERLKLV |
| 730 | 740 | 750 | 760 | 770 | 780 |
| PLNQESVEER | VAAFRNFSDE | IRHNLSEVLL | ATMNILFTQF | KRLKGTSPSS | SSRPQRVIED |
| 790 | 800 | 810 | |||
| RDSQLRSQAR | TLITFAGMIP | YRTSGDTNAR | LVQMEVLMN |