F4J284
PR
Gene name |
NUP93B |
Protein name |
Nuclear pore complex protein NUP93B |
Names |
Nucleoporin 93B |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT3G57350 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for F4J284
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-F4J284-F1 | Predicted | AlphaFoldDB |
70 variants for F4J284
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH06331143 | 8 | S>I | No | 1000Genomes | |
| tmp_3_21225215_G_A | 31 | P>S | No | 1000Genomes | |
| ENSVATH02517328 | 33 | L>I | No | 1000Genomes | |
| ENSVATH00424094 | 37 | L>S | No | 1000Genomes | |
| tmp_3_21225061_G_T | 47 | L>I | No | 1000Genomes | |
| tmp_3_21225055_C_T | 49 | A>T | No | 1000Genomes | |
| ENSVATH06331141 | 82 | K>N | No | 1000Genomes | |
| ENSVATH00424090 | 115 | S>L | No | 1000Genomes | |
| tmp_3_21224437_G_C | 116 | A>G | No | 1000Genomes | |
| tmp_3_21224429_C_G | 119 | E>Q | No | 1000Genomes | |
| ENSVATH02517320 | 126 | R>Q | No | 1000Genomes | |
| ENSVATH06331137 | 132 | M>V | No | 1000Genomes | |
| ENSVATH00424088 | 149 | H>D | No | 1000Genomes | |
| ENSVATH12803740 | 169 | S>Y | No | 1000Genomes | |
| tmp_3_21223809_T_C | 200 | K>R | No | 1000Genomes | |
| tmp_3_21223800_T_C | 203 | Y>C | No | 1000Genomes | |
| tmp_3_21223776_T_G | 211 | K>T | No | 1000Genomes | |
| ENSVATH00424085 | 224 | L>P | No | 1000Genomes | |
| tmp_3_21223285_G_C | 258 | T>R | No | 1000Genomes | |
| tmp_3_21223255_A_G | 268 | V>A | No | 1000Genomes | |
| ENSVATH02517313 | 271 | R>K | No | 1000Genomes | |
| ENSVATH02517312 | 297 | H>L | No | 1000Genomes | |
| ENSVATH02517312 | 297 | H>R | No | 1000Genomes | |
| ENSVATH09449316 | 308 | G>E | No | 1000Genomes | |
| ENSVATH09449317 | 308 | G>R | No | 1000Genomes | |
| ENSVATH09449315 | 309 | N>Y | No | 1000Genomes | |
| tmp_3_21222770_T_C | 324 | Y>C | No | 1000Genomes | |
| ENSVATH02517310 | 340 | V>L | No | 1000Genomes | |
| ENSVATH06331119 | 381 | I>M | No | 1000Genomes | |
| ENSVATH12803716 | 388 | A>T | No | 1000Genomes | |
| tmp_3_21222283_C_G | 416 | K>N | No | 1000Genomes | |
| ENSVATH12803715 | 423 | T>I | No | 1000Genomes | |
| tmp_3_21222239_T_A | 431 | Q>L | No | 1000Genomes | |
| tmp_3_21222225_T_A | 436 | M>L | No | 1000Genomes | |
| ENSVATH12803694 | 440 | S>L | No | 1000Genomes | |
| tmp_3_21222197_G_T | 445 | T>K | No | 1000Genomes | |
| ENSVATH06331118 | 463 | G>E | No | 1000Genomes | |
| ENSVATH06331117 | 467 | M>K | No | 1000Genomes | |
| ENSVATH06331116 | 564 | E>D | No | 1000Genomes | |
| ENSVATH12803692 | 564 | E>Q | No | 1000Genomes | |
| tmp_3_21221800_C_G | 577 | L>F | No | 1000Genomes | |
| tmp_3_21221777_G_A | 585 | T>M | No | 1000Genomes | |
| tmp_3_21221736_C_G | 599 | G>R | No | 1000Genomes | |
| ENSVATH14446610 | 622 | L>V | No | 1000Genomes | |
| ENSVATH00424081 | 628 | S>L | No | 1000Genomes | |
| tmp_3_21221607_A_T | 642 | S>T | No | 1000Genomes | |
| ENSVATH06331115 | 643 | G>R | No | 1000Genomes | |
| ENSVATH02517303 | 644 | E>K | No | 1000Genomes | |
| ENSVATH02517302 | 666 | A>V | No | 1000Genomes | |
| ENSVATH02517301 | 669 | F>C | No | 1000Genomes | |
| ENSVATH02517300 | 677 | K>N | No | 1000Genomes | |
| tmp_3_21221307_A_T | 688 | F>L | No | 1000Genomes | |
| ENSVATH06331110 | 695 | I>M | No | 1000Genomes | |
| tmp_3_21221212_A_T | 720 | L>H | No | 1000Genomes | |
| ENSVATH06331109 | 724 | G>S | No | 1000Genomes | |
| tmp_3_21221192_T_C | 727 | I>V | No | 1000Genomes | |
| tmp_3_21221028_T_C | 747 | E>G | No | 1000Genomes | |
| ENSVATH02517292 | 763 | K>Q | No | 1000Genomes | |
| ENSVATH06331106 | 774 | I>T | No | 1000Genomes | |
| tmp_3_21220912_C_G | 786 | D>H | No | 1000Genomes | |
| ENSVATH00424076 | 794 | S>L | No | 1000Genomes | |
| tmp_3_21220884_T_G | 795 | D>A | No | 1000Genomes | |
| tmp_3_21220881_T_A | 796 | E>V | No | 1000Genomes | |
| tmp_3_21220846_C_T | 808 | V>I | No | 1000Genomes | |
| ENSVATH12803685 | 820 | D>N | No | 1000Genomes | |
| tmp_3_21220800_G_C,A | 823 | A>G | No | 1000Genomes | |
| tmp_3_21220800_G_C,A | 823 | A>V | No | 1000Genomes | |
| ENSVATH00424075 | 824 | D>E | No | 1000Genomes | |
| tmp_3_21220776_C_T | 831 | G>D | No | 1000Genomes | |
| ENSVATH06331105 | 846 | R>Q | No | 1000Genomes |
No associated diseases with F4J284
No regional properties for F4J284
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for F4J284 | |||
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| nuclear envelope | The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space). |
| nuclear pore | A protein complex providing a discrete opening in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| structural constituent of nuclear pore | The action of a molecule that contributes to the structural integrity of the nuclear pore complex, a protein-lined channel in the nuclear envelope that allows the transfer of macromolecules. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| poly(A)+ mRNA export from nucleus | The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm. |
| protein import into nucleus | The directed movement of a protein from the cytoplasm to the nucleus. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MANDQEMSGW | TDLLHSSTKL | LEQAAPSSQF | PPLQRNLDQL | EALSRKLKAK | TLRNEAPSQS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| IAATRLLARE | GINADQLSRD | LKSFELKTTF | EDVFPAETTS | VEEYLQQVHE | MAMVSAIQEA |
| 130 | 140 | 150 | 160 | 170 | 180 |
| QKDNVRSFNN | YMLKVLEEDC | IKEKRDFLHS | LSKTSMLPKT | KMINSSRGSH | AGSLVPLSPQ |
| 190 | 200 | 210 | 220 | 230 | 240 |
| VSSKPGTELV | SMTNKPIHEK | KAYVYAEVVK | KLNSARERGL | PFKLATLFNG | AYESLEIDLT |
| 250 | 260 | 270 | 280 | 290 | 300 |
| RGKSVNMQKL | WQLIQGMTGE | ESAVQHGVSK | RMALVIGARR | HLECGHGKHI | MDTIQSHPTQ |
| 310 | 320 | 330 | 340 | 350 | 360 |
| AALGGSVGNL | QRIRAFLRIR | LRDYGSLDFD | SVDARRQPPV | DTTWQQIYFC | LRTGYYEEAR |
| 370 | 380 | 390 | 400 | 410 | 420 |
| EIAQSSRSSQ | QQFAPLLTEW | ITTGGTVAAQ | TAATASEECE | KLLRMGDRFG | QTTYDKKKLL |
| 430 | 440 | 450 | 460 | 470 | 480 |
| LYTIISGSRR | QIDRIMRDFS | TLFNTIEDFL | WFKLSCVRDV | AGGSSSMIVN | DGLVPYSLDD |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LQAYLNKFEP | SYYTKNGKDP | LVYPYVLLLS | IQLLPAIMHM | SNEAGDEGYN | IDAVHVAISL |
| 550 | 560 | 570 | 580 | 590 | 600 |
| VDHSILSEGS | GTGRKLSVMD | ANAEASSMIR | QYGSMYLHHG | DLQMTLEYYA | QAAIAVGGGQ |
| 610 | 620 | 630 | 640 | 650 | 660 |
| QAWSGRSNVD | QQRQRNLMLK | QLLTEILSQE | DGIHFLLGAR | GSGEEGELGR | FLPDIKLRQQ |
| 670 | 680 | 690 | 700 | 710 | 720 |
| FLIEAAHQFQ | EAGLYDKSIE | LQKRVGAFSS | ALETINKCLS | EAICSLVRGR | PDGESRTEGL |
| 730 | 740 | 750 | 760 | 770 | 780 |
| VLSGNDILNS | YKYHPDVSAQ | ERHLVMEQET | ILRELEAILS | IHKLARLNKH | LDAIREVAKL |
| 790 | 800 | 810 | 820 | 830 | 840 |
| PFLHLDPRQP | DTTSDEFQKA | SSYFQTCVPD | LLKVALTCLD | NVADTDGSIR | GMRSKIAGFL |
| 850 | |||||
| ASNTQRNWPR | DLYEKIARSF |