Q8IY81
Gene name |
FTSJ3 |
Protein name |
pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 |
Names |
Protein ftsJ homolog 3, Putative rRNA methyltransferase 3 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:117246 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
12 structures for Q8IY81
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 8FKP | EM | 285 A | SJ | 1-847 | PDB |
| 8FKQ | EM | 276 A | SJ | 1-847 | PDB |
| 8FKR | EM | 289 A | SJ | 1-847 | PDB |
| 8FKS | EM | 288 A | SJ | 1-847 | PDB |
| 8FKT | EM | 281 A | SJ | 1-847 | PDB |
| 8FKU | EM | 282 A | SJ | 1-847 | PDB |
| 8FKV | EM | 247 A | SJ | 1-847 | PDB |
| 8FKW | EM | 250 A | SJ | 1-847 | PDB |
| 8FKX | EM | 259 A | SJ | 1-847 | PDB |
| 8FKY | EM | 267 A | SJ | 1-847 | PDB |
| 8IR1 | EM | 330 A | 9 | 1-847 | PDB |
| AF-Q8IY81-F1 | Predicted | AlphaFoldDB |
759 variants for Q8IY81
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| rs1304507852 | 1 | M>? | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA400592501 rs1181646233 |
2 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA400592463 rs1259461984 |
4 | K>N | No |
ClinGen gnomAD |
|
|
CA400592468 rs1424921888 |
4 | K>R | No |
ClinGen gnomAD |
|
|
CA8705779 rs768964386 |
5 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA400592459 rs1257604790 |
5 | G>S | No |
ClinGen gnomAD |
|
|
CA400592442 rs1308670326 |
6 | K>R | No |
ClinGen TOPMed |
|
|
rs747198647 CA8705778 |
7 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1261911035 CA400592413 |
9 | K>E | No |
ClinGen gnomAD |
|
|
rs1221165787 CA400592407 |
9 | K>R | No |
ClinGen gnomAD |
|
|
rs780368303 CA8705777 |
10 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs746025074 CA8705775 |
17 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1325025812 CA400592286 |
19 | A>S | No |
ClinGen gnomAD |
|
|
CA400592278 rs1442206937 |
20 | K>R | No |
ClinGen TOPMed |
|
|
CA400592244 rs1230195948 |
23 | G>A | No |
ClinGen gnomAD |
|
|
rs1230195948 CA400592245 |
23 | G>D | No |
ClinGen gnomAD |
|
|
CA8705743 rs762604857 |
24 | Y>C | No |
ClinGen ExAC |
|
|
CA400592230 rs1380191187 |
25 | R>H | No |
ClinGen gnomAD |
|
|
CA8705742 rs750376848 |
26 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs761636452 CA8705740 |
33 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA8705741 rs765335510 |
33 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776501683 CA8705739 |
34 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705738 rs772138335 |
38 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1364698514 CA400592150 |
38 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA400592154 rs772138335 |
38 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705737 rs759834625 |
40 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA400592104 rs1195838350 |
45 | A>P | No |
ClinGen TOPMed |
|
|
rs147801800 CA292945273 |
47 | A>G | No |
ClinGen 1000Genomes |
|
|
CA8705734 rs140736206 |
47 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs140736206 CA8705735 |
47 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 49 | L>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA292945269 rs771530380 |
56 | G>E | No |
ClinGen Ensembl |
|
|
CA8705701 rs753792807 |
58 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA400591985 rs1451489227 |
62 | A>V | No |
ClinGen gnomAD |
|
|
rs755870718 CA8705699 |
63 | A>V | No |
ClinGen ExAC |
|
| TCGA novel | 67 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8705698 rs140700881 |
67 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1482303752 CA400591949 |
68 | V>I | No |
ClinGen gnomAD |
|
|
CA400591948 rs1482303752 |
68 | V>L | No |
ClinGen gnomAD |
|
| TCGA novel | 70 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA400591329 rs1567754814 |
71 | L>F | No |
ClinGen Ensembl |
|
|
rs114477398 CA8705696 |
72 | I>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1296529981 CA400591290 |
73 | V>A | No |
ClinGen gnomAD |
|
|
CA400591293 rs375762808 |
73 | V>L | No |
ClinGen ESP ExAC gnomAD |
|
|
CA8705695 rs375762808 |
73 | V>M | No |
ClinGen ESP ExAC gnomAD |
|
|
CA8705666 rs370864062 |
80 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8705665 rs777177106 |
81 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs769382758 CA8705664 |
82 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs748053748 CA8705663 |
83 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1017705414 CA292944803 |
83 | L>R | No |
ClinGen TOPMed |
|
|
CA400591097 rs1327831675 |
85 | N>H | No |
ClinGen gnomAD |
|
|
CA8705661 rs115628816 |
85 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA292944802 rs115628816 |
85 | N>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8705660 rs751363362 |
86 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA400591070 rs1351653805 |
87 | V>L | No |
ClinGen gnomAD |
|
|
CA400591043 rs1385454198 |
89 | L>H | No |
ClinGen gnomAD |
|
|
CA292944796 rs1026506519 |
89 | L>V | No |
ClinGen TOPMed |
|
|
CA400591030 rs1393411020 |
90 | Q>R | No |
ClinGen gnomAD |
|
|
rs2584625 CA400591021 |
91 | Q>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
VAR_023284 rs2584625 CA8705658 |
91 | Q>E | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA8705657 rs753917656 |
91 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs1409800586 CA400590982 |
93 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA8705656 rs764050450 |
97 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA400590916 rs1473498848 |
97 | R>H | No |
ClinGen gnomAD |
|
| TCGA novel | 97 | R>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA292944781 rs778863367 |
98 | C>G | No |
ClinGen Ensembl |
|
|
rs753243085 CA8705654 |
100 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA8705633 rs766628176 |
101 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA8705634 rs752146685 |
101 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA400590717 rs766628176 |
101 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs573723572 CA8705630 |
105 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA400590663 rs1332298794 |
105 | E>Q | No |
ClinGen gnomAD |
|
|
CA400590618 rs1428850259 |
107 | K>N | No |
ClinGen gnomAD |
|
|
rs1174253595 CA400590630 |
107 | K>Q | No |
ClinGen gnomAD |
|
|
rs1004036967 CA292944384 |
107 | K>T | No |
ClinGen Ensembl |
|
|
rs1190927476 CA400590571 |
110 | K>M | No |
ClinGen TOPMed |
|
|
rs1388147854 CA400590583 |
110 | K>Q | No |
ClinGen gnomAD |
|
|
rs1192737267 CA400590560 |
111 | V>F | No |
ClinGen gnomAD |
|
| rs761565909 | 114 | V>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs199562110 CA8705625 |
116 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs928218996 CA292944355 |
120 | P>L | No |
ClinGen TOPMed |
|
|
CA8705624 rs775548004 |
121 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA400590396 rs1165801770 |
122 | V>A | No |
ClinGen TOPMed |
|
|
CA400590398 rs1277250259 |
122 | V>I | No |
ClinGen gnomAD |
|
|
rs1282431681 CA400590381 |
124 | A>T | No |
ClinGen gnomAD |
|
|
rs1450286723 CA400590352 |
126 | W>* | No |
ClinGen gnomAD |
|
| TCGA novel | 126 | W>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs758970126 CA8705593 |
135 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA400590225 rs1206909837 |
135 | H>Y | No |
ClinGen gnomAD |
|
|
rs747668148 CA292944216 |
138 | L>V | No |
ClinGen gnomAD |
|
|
CA400590184 rs1224320237 |
139 | M>T | No |
ClinGen gnomAD |
|
|
rs1366593342 CA400590173 |
140 | A>S | No |
ClinGen gnomAD |
|
|
rs779221212 CA8705591 |
141 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA8705589 rs753477986 |
142 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753477986 CA8705590 |
142 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705588 rs201604330 |
142 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8705587 rs760037787 |
143 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752265280 CA8705586 |
144 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs767316336 CA8705585 |
146 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376729856 CA8705583 |
150 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372104659 CA8705582 |
150 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1247638093 CA400590073 |
151 | G>D | No |
ClinGen gnomAD |
|
|
rs1460028896 CA400590055 |
154 | F>L | No |
ClinGen TOPMed |
|
|
CA400590053 rs1175354952 |
154 | F>Y | No |
ClinGen gnomAD |
|
|
CA400590045 rs1466292424 |
155 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA8705580 rs368348973 |
155 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs768932835 CA8705579 |
156 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1469587281 CA400590025 |
158 | V>A | No |
ClinGen gnomAD |
|
|
CA400590024 rs1469587281 |
158 | V>G | No |
ClinGen gnomAD |
|
|
CA400590012 rs1311545956 |
160 | R>H | No |
ClinGen gnomAD |
|
|
CA400590005 rs1276159986 |
161 | S>C | No |
ClinGen gnomAD |
|
|
rs780216779 CA8705577 |
162 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772089187 CA8705576 |
162 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400590001 rs772089187 |
162 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705575 rs746355517 |
163 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1432496779 CA400589985 |
164 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA400589972 rs1288966738 |
165 | Q>R | No |
ClinGen gnomAD |
|
|
CA8705574 rs779455824 |
176 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs202091645 CA8705572 |
176 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8705573 rs202091645 |
176 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8705571 rs777349784 |
177 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150004510 CA8705570 |
177 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA400589830 rs1336126168 |
180 | A>V | No |
ClinGen TOPMed |
|
|
rs1390001541 CA400589828 |
181 | T>A | No |
ClinGen gnomAD |
|
| TCGA novel | 183 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs981012722 CA292944036 |
186 | S>T | No |
ClinGen TOPMed |
|
|
CA400589760 rs1166914926 |
188 | H>N | No |
ClinGen TOPMed gnomAD |
|
|
rs962346631 CA292944029 |
188 | H>Q | No |
ClinGen Ensembl |
|
|
rs1166914926 CA400589758 |
188 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA8705569 rs767031489 |
189 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705568 rs767031489 |
189 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1262443196 CA400589726 |
191 | A>T | No |
ClinGen gnomAD |
|
| TCGA novel | 191 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 192 | E>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs754503836 CA400589705 |
193 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs754503836 CA8705567 |
193 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA8705565 rs766419847 |
194 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA400589687 rs1212992599 |
195 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8705562 rs764185716 |
199 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA400589610 rs1294632098 |
199 | G>V | No |
ClinGen gnomAD |
|
|
CA292943956 rs915555606 |
200 | F>I | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 200 | F>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8705544 rs371048410 |
202 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1404076308 CA400589578 |
203 | P>S | No |
ClinGen TOPMed |
|
|
rs374578813 CA8705542 |
204 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 204 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8705541 rs767638937 |
209 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1456609717 CA400589492 |
210 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA400589494 rs1293124489 |
210 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
CA400589452 rs1156710492 |
213 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1277203604 CA400589456 |
213 | P>S | No |
ClinGen Ensembl |
|
|
CA8705538 rs139272933 |
214 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8705539 rs139272933 |
214 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA292943936 rs373884077 |
215 | F>C | No |
ClinGen ESP TOPMed |
|
|
rs1253256652 CA400589438 |
215 | F>L | No |
ClinGen TOPMed |
|
|
rs749771391 CA8705537 |
216 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1014104893 CA292943929 |
219 | E>D | No |
ClinGen gnomAD |
|
|
rs535993552 CA8705536 |
220 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs866980857 CA292943919 |
221 | E>D | No |
ClinGen TOPMed |
|
|
rs780836020 CA8705533 |
224 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA8705532 rs754698381 |
225 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA8705531 rs761904927 |
225 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1286973981 CA400589141 |
227 | V>G | No |
ClinGen gnomAD |
|
|
CA8705529 rs370922839 |
227 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA400589124 rs1241854606 |
228 | T>I | No |
ClinGen gnomAD |
|
| TCGA novel | 229 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs750365344 CA8705528 |
231 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400589034 rs889135352 |
233 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs114060701 CA8705527 |
235 | K>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs757010495 CA8705526 |
235 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs745787698 | 235 | K>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1555577068 CA8705524 |
236 | P>T | No |
ClinGen Ensembl |
|
|
rs771708058 CA8705508 |
238 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400588876 rs771708058 |
238 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400588870 rs1452087263 |
238 | A>V | No |
ClinGen TOPMed |
|
|
rs1567753791 CA400588858 |
239 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA8705507 rs745375698 |
240 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs973791225 CA292943739 |
241 | Y>C | No |
ClinGen Ensembl |
|
|
CA400588795 rs1432606977 |
242 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1171984466 CA400588804 |
242 | A>P | No |
ClinGen gnomAD |
|
|
CA400588792 rs1432606977 |
242 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs753629671 CA8705504 |
243 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA400588733 rs1448521158 |
244 | G>D | No |
ClinGen gnomAD |
|
|
CA292943726 rs986025721 |
244 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1448521158 CA400588726 |
244 | G>V | No |
ClinGen gnomAD |
|
|
CA8705503 rs777521053 |
246 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs755959447 CA8705502 |
247 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA8705500 rs751776424 |
249 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA292943720 rs751776424 |
249 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200565432 CA8705499 |
251 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1256057131 CA400588555 |
251 | R>H | No |
ClinGen gnomAD |
|
|
rs200565432 CA400588567 |
251 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 254 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA400588459 rs1460467110 |
256 | D>Y | No |
ClinGen TOPMed |
|
|
rs1272212120 CA400588392 |
258 | L>F | No |
ClinGen gnomAD |
|
|
CA400588377 rs1339996711 |
259 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA8705496 rs762191968 |
259 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705495 rs762191968 |
259 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1598350645 CA400588352 |
260 | A>G | No |
ClinGen Ensembl |
|
|
CA400588360 rs1412886596 |
260 | A>P | No |
ClinGen gnomAD |
|
|
rs201066148 CA8705494 |
261 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs534977992 CA8705492 |
263 | P>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA400588275 rs200701645 |
264 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA292943705 rs200701645 |
264 | V>D | No |
ClinGen TOPMed gnomAD |
|
|
rs775219402 CA8705491 |
265 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA400588268 rs775219402 |
265 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1475445827 CA400588162 |
269 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 270 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs199700918 CA8705490 |
271 | S>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8705488 rs778668949 |
272 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8705464 rs769742109 |
273 | I>F | No |
ClinGen ExAC gnomAD |
|
|
CA292943577 rs116773887 |
274 | M>I | No |
ClinGen 1000Genomes TOPMed |
|
|
CA292943572 rs747894166 |
276 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705463 rs747894166 |
276 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780930796 CA8705462 |
276 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA400587872 rs747894166 |
276 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746067618 CA400587844 |
277 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754848413 CA8705461 |
277 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA8705457 rs528345621 |
278 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs115809493 CA8705459 |
278 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs116694689 CA8705458 |
278 | E>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1567753621 CA400587785 |
279 | E>D | No |
ClinGen Ensembl |
|
|
CA292943551 rs756478154 |
279 | E>K | No |
ClinGen Ensembl |
|
|
rs182489624 CA8705456 |
281 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs756720672 CA400587741 |
282 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705455 rs756720672 |
282 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705454 rs753298354 |
284 | P>L | No |
ClinGen ExAC TOPMed |
|
|
rs932875381 CA292943541 |
285 | A>T | No |
ClinGen TOPMed |
|
|
CA400587650 rs1567753603 |
286 | T>I | No |
ClinGen Ensembl |
|
|
CA400587644 rs1267935533 |
287 | T>A | No |
ClinGen TOPMed |
|
|
CA8705453 rs767753368 |
288 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs773807280 CA8705451 |
289 | D>A | No |
ClinGen ExAC gnomAD |
|
|
CA8705452 rs549164456 |
289 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA400587564 rs1201498117 |
290 | I>T | No |
ClinGen TOPMed |
|
|
CA8705450 rs143751811 |
291 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs867916796 CA292943528 |
291 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA400587543 rs1598350506 |
292 | V>A | No |
ClinGen Ensembl |
|
|
rs769330844 CA8705447 |
293 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs941087293 CA292943515 |
295 | Q>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1567753566 CA400587405 |
298 | R>K | No |
ClinGen Ensembl |
|
|
CA8705444 rs768334485 |
299 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746827307 CA8705443 |
301 | G>W | No |
ClinGen ExAC gnomAD |
|
|
rs771207063 CA8705441 |
302 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8705440 rs749340774 |
302 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705439 rs777970497 |
303 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA400587197 rs1326087401 |
306 | R>G | No |
ClinGen TOPMed |
|
|
rs758818019 CA8705414 |
307 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA8705412 rs148240439 |
308 | L>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs753414032 CA400586925 |
311 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753414032 CA8705410 |
311 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200921516 CA292943328 |
313 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200921516 CA8705409 |
313 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1354124034 CA400586868 |
314 | K>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8705406 rs771981934 |
316 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs149474852 CA8705407 |
316 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs759407401 CA8705405 |
317 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs931816922 CA292943311 |
317 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs773508514 CA8705404 |
321 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400586645 rs748136302 |
323 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1474305165 CA400586593 |
325 | E>* | No |
ClinGen gnomAD |
|
| TCGA novel | 327 | A>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs776737733 CA8705401 |
327 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768663581 CA8705400 |
329 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA8705399 rs747534313 |
331 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs758697679 CA8705397 |
332 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs746247221 CA8705396 |
333 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA400586304 rs1394863131 |
335 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs755589919 CA8705371 |
337 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA292943205 rs887271485 |
338 | E>G | No |
ClinGen Ensembl |
|
|
CA8705368 rs115601892 |
344 | E>D | No |
ClinGen 1000Genomes ExAC |
|
|
rs1376319108 CA400585100 |
344 | E>Q | No |
ClinGen Ensembl |
|
|
rs369386316 CA292943196 |
345 | E>D | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA400585069 rs1439025412 |
345 | E>K | No |
ClinGen gnomAD |
|
| rs1372096209 | 345 | E>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1170175899 CA400585019 |
347 | S>P | No |
ClinGen TOPMed |
|
|
rs60380208 CA8705365 |
348 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs776844588 CA8705364 |
349 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA400584958 rs1455134429 |
350 | G>A | No |
ClinGen gnomAD |
|
|
rs1172573896 CA400584948 |
351 | T>S | No |
ClinGen gnomAD |
|
|
CA8705362 rs542147529 |
351 | T>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201856259 CA400584927 |
352 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs201856259 CA8705361 |
352 | T>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1302084902 CA400584855 |
356 | S>C | No |
ClinGen TOPMed |
|
|
rs146889707 CA8705358 |
356 | S>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs573134286 CA8705357 |
357 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA400584843 rs1486374248 |
357 | K>R | No |
ClinGen gnomAD |
|
|
rs1226450047 CA400584834 |
358 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1277106918 CA400584817 |
359 | E>K | No |
ClinGen TOPMed |
|
|
rs777431953 CA8705354 |
360 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1209856227 CA400584745 |
363 | E>K | No |
ClinGen TOPMed |
|
|
CA400584717 rs1390459175 |
364 | E>D | No |
ClinGen TOPMed |
|
|
rs1226772416 CA400584708 |
365 | E>G | No |
ClinGen gnomAD |
|
|
rs780822822 CA8705347 |
366 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1241044190 CA400584690 |
366 | E>G | No |
ClinGen gnomAD |
|
|
rs780822822 CA8705348 |
366 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400584694 rs780822822 |
366 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400584674 rs1288280736 |
367 | Q>E | No |
ClinGen TOPMed |
|
|
rs1383887086 CA400584628 |
370 | Q>E | No |
ClinGen gnomAD |
|
|
rs754592400 CA8705343 |
372 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA8705342 rs751536664 |
373 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400584588 rs1312051804 |
373 | A>T | No |
ClinGen gnomAD |
|
|
rs758152035 CA8705340 |
374 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA8705341 rs200270895 |
374 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA292943094 rs920331681 CA400584549 |
375 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA400584556 rs1245641656 |
375 | M>T | No |
ClinGen TOPMed |
|
|
CA400584523 rs1311048615 |
377 | A>V | No |
ClinGen TOPMed |
|
|
rs750210233 CA8705339 |
378 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs967209372 CA292943090 |
378 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs764338472 CA8705338 |
379 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs764338472 CA400584502 |
379 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs867316030 CA292943087 |
381 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA400584471 rs1486893483 |
381 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs767576029 CA8705335 |
383 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA400584425 rs1272010665 |
384 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA8705304 rs375326585 |
389 | K>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA292942857 rs1019865511 |
390 | L>V | No |
ClinGen TOPMed |
|
|
CA8705302 rs145159931 |
392 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs145159931 CA8705303 |
392 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8705300 rs1245439560 |
392 | R>H | Variant assessed as Somatic; 4.62e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1217008899 CA400584267 |
393 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA400584224 rs1280249884 |
396 | K>E | No |
ClinGen TOPMed |
|
|
rs945927232 CA292942852 |
397 | Q>H | No |
ClinGen Ensembl |
|
|
rs1318299540 CA400584201 |
397 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs370518967 CA292942848 |
398 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749097576 CA400584187 |
398 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs749097576 CA8705298 |
398 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8705299 rs370518967 |
398 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705296 rs548863228 |
399 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA400584165 rs1454005062 |
400 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs370870170 CA8705295 |
400 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370870170 CA8705294 |
400 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs758570373 CA8705293 |
401 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA400584125 rs1488882738 |
403 | L>P | No |
ClinGen gnomAD |
|
|
CA8705289 rs777169176 |
405 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400584082 rs1287929626 |
406 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA400584084 rs1287929626 |
406 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA8705288 rs760382736 |
408 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705287 rs760382736 |
408 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705285 rs771482345 |
412 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400583965 rs1270085141 |
415 | E>D | No |
ClinGen gnomAD |
|
|
rs368385937 CA8705284 |
415 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs770879027 CA8705282 |
417 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA292942785 rs560652403 |
420 | M>T | No |
ClinGen Ensembl |
|
|
rs2727288 CA8705280 VAR_023285 |
424 | S>C | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1175815653 CA400583855 |
424 | S>N | No |
ClinGen gnomAD |
|
|
CA292942781 rs2727288 |
424 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA292942775 rs922710640 |
425 | T>A | No |
ClinGen TOPMed |
|
|
rs563112333 CA8705279 |
425 | T>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8705277 rs546051924 |
427 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8705278 rs755957588 |
427 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs758351662 CA8705275 |
429 | H>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 433 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1468212917 CA400583688 |
435 | V>I | No |
ClinGen TOPMed |
|
|
CA400583677 rs1319447207 |
436 | T>I | No |
ClinGen gnomAD |
|
|
rs1001759498 CA292940881 |
437 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA8705252 rs754393764 |
438 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs779116061 CA8705253 |
438 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs754393764 CA8705251 |
438 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA8705249 rs776832064 |
439 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA292940855 rs377754710 |
440 | M>T | No |
ClinGen gnomAD |
|
|
CA400583658 rs1396757475 |
440 | M>V | No |
ClinGen gnomAD |
|
|
CA292940845 rs904760080 |
443 | A>V | No |
ClinGen TOPMed |
|
|
CA8705248 rs753129963 |
444 | D>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 444 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs202080801 CA8705247 |
445 | T>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs202080801 CA400583621 |
445 | T>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA292940822 rs753318540 |
446 | F>C | No |
ClinGen Ensembl |
|
|
rs757503012 CA292940825 |
446 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA400583614 rs919221861 |
447 | L>M | No |
ClinGen Ensembl |
|
|
CA292940819 rs919221861 |
447 | L>V | No |
ClinGen Ensembl |
|
|
rs1171235923 CA400583605 |
448 | S>F | No |
ClinGen gnomAD |
|
|
rs960576651 CA292940814 |
449 | D>E | No |
ClinGen Ensembl |
|
|
rs550844629 CA8705244 |
449 | D>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA400583604 rs550844629 |
449 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA8705245 rs550844629 |
449 | D>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA292940812 rs565282530 |
454 | D>G | No |
ClinGen TOPMed |
|
| rs747572988 | 454 | D>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs61747443 CA8705242 |
456 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA400583484 rs1458685970 |
457 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA8705237 rs768385795 |
461 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776454299 CA8705238 |
461 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs764463921 CA400583402 |
463 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705235 rs764463921 |
463 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1305082014 CA400583396 |
463 | D>V | No |
ClinGen gnomAD |
|
|
CA8705234 rs771068411 |
464 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA292940752 rs771068411 |
464 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400583390 rs1242611705 |
464 | G>S | No |
ClinGen gnomAD |
|
|
rs749396719 CA8705233 |
467 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400583282 rs1388470330 |
471 | S>N | No |
ClinGen gnomAD |
|
|
rs756678526 CA8705231 |
472 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA8705229 rs781604239 |
474 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400583216 rs1469159794 |
475 | P>R | No |
ClinGen TOPMed |
|
|
CA292940738 rs148527553 |
476 | E>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed gnomAD |
|
CA292940731 rs755361146 |
477 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751142403 CA8705227 |
477 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA8705228 rs755361146 |
477 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1192464712 CA400583166 |
479 | A>G | No |
ClinGen gnomAD |
|
|
rs766032190 CA8705226 |
480 | G>* | No |
ClinGen ExAC gnomAD |
|
|
CA400583141 rs1169232634 |
481 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
CA292940728 rs756239766 |
482 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA400583138 rs756239766 |
482 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA8705224 rs757854130 |
483 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1416484679 CA400583106 |
484 | H>R | No |
ClinGen TOPMed |
|
| TCGA novel | 485 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749964999 CA8705223 |
487 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA400583040 rs1372250555 |
489 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs761788803 CA8705221 |
489 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1166586055 CA400583012 |
491 | K>R | No |
ClinGen TOPMed |
|
|
CA8705219 rs375890755 |
492 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA292940714 rs145710929 |
492 | R>H | No |
ClinGen ESP TOPMed |
|
|
CA8705220 rs375890755 |
492 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs767462503 CA8705197 |
494 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA292940607 rs930330036 |
495 | L>I | No |
ClinGen Ensembl |
|
|
rs1278050817 CA400582899 |
497 | E>* | No |
ClinGen TOPMed |
|
|
rs1478330300 CA400582892 |
498 | V>L | No |
ClinGen gnomAD |
|
|
CA8705195 rs773370128 |
499 | Q>R | No |
ClinGen ExAC |
|
|
CA8705194 rs183994225 |
500 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs777145453 CA8705192 |
501 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1280162184 CA400582865 |
502 | K>E | No |
ClinGen TOPMed |
|
|
CA8705188 rs780372823 |
503 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs747553034 CA8705190 |
503 | E>K | No |
ClinGen ExAC |
|
|
CA8705185 rs758822183 |
504 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA292940507 rs144579102 |
505 | E>D | No |
ClinGen ESP |
|
|
rs761475887 CA8705184 |
505 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705183 rs778434607 |
507 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1174229530 CA400582815 |
509 | N>D | No |
ClinGen TOPMed |
|
|
rs1174229530 CA400582816 |
509 | N>H | No |
ClinGen TOPMed |
|
|
CA8705178 rs753315010 |
509 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA400582805 rs1397540765 |
510 | P>R | No |
ClinGen gnomAD |
|
|
rs376119296 CA8705176 |
511 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs750597049 CA8705172 |
517 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA8705171 rs765397726 |
518 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs761911337 CA8705170 |
520 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA400582698 rs1200384244 |
527 | N>S | No |
ClinGen gnomAD |
|
|
CA400582687 rs1172882485 |
529 | W>R | No |
ClinGen gnomAD |
|
|
CA400582659 rs1237101186 |
532 | K>N | No |
ClinGen TOPMed |
|
|
CA400582642 rs1351032265 |
533 | G>D | No |
ClinGen gnomAD |
|
|
CA8705143 rs772590864 |
534 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs372743428 CA400582637 |
534 | S>N | No |
ClinGen ESP ExAC gnomAD |
|
|
rs114963947 CA8705141 |
534 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8705142 rs372743428 |
534 | S>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1236246258 CA400582619 |
536 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
CA8705138 rs773000789 |
538 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 539 | E>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8705136 rs747680587 |
543 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs930358885 CA292940249 |
545 | A>T | No |
ClinGen Ensembl |
|
|
CA400582492 rs1189329934 |
547 | E>D | No |
ClinGen gnomAD |
|
|
CA8705133 rs754838933 |
551 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747013764 CA8705132 |
553 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747013764 CA400582437 |
553 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758278752 CA8705130 |
554 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705129 rs753993771 |
555 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA8705128 rs764314785 |
555 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA8705127 rs115313967 |
556 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8705125 rs767627323 |
558 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400582406 rs1368914397 |
558 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA400582402 rs142875570 |
559 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs142875570 CA8705123 |
559 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs759940040 CA8705124 |
559 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705122 rs766652641 |
560 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368767519 CA400582379 |
562 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs116137638 CA8705120 |
562 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs116137638 CA8705119 |
562 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8705121 rs368767519 |
562 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs947869949 CA292940173 |
563 | Q>H | No |
ClinGen TOPMed |
|
|
rs747839904 CA8705117 |
564 | Q>R | No |
ClinGen ExAC TOPMed |
|
|
CA8705116 rs776256708 |
565 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA400582292 rs546579575 |
567 | K>E | No |
ClinGen 1000Genomes |
|
|
CA8705112 rs546579575 |
567 | K>Q | No |
ClinGen 1000Genomes |
|
|
rs1265097416 CA400582258 |
568 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA400582240 rs1361739544 |
569 | Q>H | No |
ClinGen TOPMed |
|
|
CA400582248 rs1598348963 |
569 | Q>P | No |
ClinGen Ensembl |
|
|
rs1372338554 CA8705107 |
570 | L>P | No |
ClinGen Ensembl |
|
|
rs1372338554 CA400582231 |
570 | L>Q | No |
ClinGen Ensembl |
|
| TCGA novel | 572 | Q>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1482718696 CA400582150 |
574 | P>H | No |
ClinGen gnomAD |
|
|
CA400582140 rs1482718696 |
574 | P>L | No |
ClinGen gnomAD |
|
|
CA8705106 rs374584906 |
575 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA400582128 rs1598348944 |
575 | P>L | No |
ClinGen Ensembl |
|
|
rs1211580565 CA400582112 |
577 | C>R | No |
ClinGen gnomAD |
|
|
rs780046157 CA8705105 |
577 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780046157 CA400582106 |
577 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705103 rs745687474 |
579 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs777932802 CA8705102 |
580 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA8705101 rs756300931 |
581 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs767485746 CA8705098 |
582 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs888253206 CA292940125 |
583 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1598348922 CA400581972 |
586 | L>P | No |
ClinGen Ensembl |
|
|
rs1240949270 CA400581939 |
588 | Q>P | No |
ClinGen TOPMed |
|
|
rs1464014883 CA400581907 |
589 | D>E | No |
ClinGen gnomAD |
|
|
CA400581915 rs1286564859 |
589 | D>G | No |
ClinGen TOPMed |
|
|
CA400581924 rs1330541039 |
589 | D>H | No |
ClinGen gnomAD |
|
|
rs1347074748 CA400581902 |
590 | E>K | No |
ClinGen TOPMed |
|
|
CA8705094 rs766927309 |
590 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs1423070941 CA400581866 |
592 | P>A | No |
ClinGen gnomAD |
|
|
rs1048320560 CA292940100 |
592 | P>R | No |
ClinGen TOPMed |
|
|
CA400581863 rs1423070941 |
592 | P>S | No |
ClinGen gnomAD |
|
|
rs765743961 CA8705091 |
596 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA400581783 rs1459471593 |
598 | S>A | No |
ClinGen TOPMed gnomAD |
|
|
CA8705090 rs61742931 |
598 | S>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8705089 rs776493969 |
599 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760247360 CA8705087 |
602 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA8705086 rs560942264 |
603 | A>P | No |
ClinGen 1000Genomes ExAC |
|
|
CA292940060 rs560942264 |
603 | A>T | No |
ClinGen 1000Genomes ExAC |
|
|
CA8705084 rs772079780 |
605 | T>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 607 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs778660673 CA8705081 |
607 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA400581638 rs1332018072 |
608 | E>K | No |
ClinGen gnomAD |
|
|
CA8705080 rs575324266 |
609 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs1598348858 CA400581597 |
610 | E>G | No |
ClinGen Ensembl |
|
|
rs1166389706 CA400581608 |
610 | E>K | No |
ClinGen gnomAD |
|
|
rs781485517 CA8705078 |
612 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1487685549 CA400581459 |
618 | S>R | No |
ClinGen gnomAD |
|
|
CA400581421 rs1267607354 |
620 | S>G | No |
ClinGen gnomAD |
|
|
rs1007733585 CA292940026 |
622 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1007733585 CA400581380 |
622 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA8705076 rs751687273 |
623 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA292940019 rs766730778 |
625 | E>K | No |
ClinGen Ensembl |
|
|
CA8705073 rs780034648 |
626 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA292939984 rs765433762 |
626 | E>K | No |
ClinGen Ensembl |
|
|
rs373238608 CA8705072 |
627 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs373238608 CA8705071 |
627 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705068 rs200943728 |
628 | E>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1567751654 CA400581281 |
628 | E>D | No |
ClinGen Ensembl |
|
|
CA8705069 rs200943728 |
628 | E>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8705070 rs61741254 |
628 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1386146996 CA400581277 |
629 | S>G | No |
ClinGen gnomAD |
|
|
rs769532374 CA8705030 |
629 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs989416143 CA292939804 |
630 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
rs369847580 CA8705029 |
631 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8705027 rs772221183 |
632 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA8705028 rs772221183 |
632 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1465576345 CA400580118 |
633 | L>F | No |
ClinGen gnomAD |
|
|
rs145334305 CA8705025 |
634 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs371917574 CA8705024 |
634 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs141577537 CA8705023 |
635 | G>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs141577537 CA8705022 |
635 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1053708501 CA292939749 |
636 | K>T | No |
ClinGen Ensembl |
|
|
CA400580039 rs1357453628 |
638 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1185714709 CA400580038 |
638 | R>Q | No |
ClinGen gnomAD |
|
|
CA8705021 rs138518008 |
640 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368535844 CA8705019 |
640 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368535844 CA8705020 |
640 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs754441274 CA8705018 |
641 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs145182298 CA8705017 |
642 | P>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1256149402 CA400579946 |
646 | D>V | No |
ClinGen gnomAD |
|
| rs1567751459 | 647 | D>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs149209816 CA8705014 |
648 | G>E | No |
ClinGen ESP ExAC gnomAD |
|
|
CA8705015 CA400579927 rs762933027 |
648 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs149209816 CA8705013 |
648 | G>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA292939705 rs944767208 |
650 | E>D | No |
ClinGen Ensembl |
|
|
CA400579894 rs1237725272 |
650 | E>G | No |
ClinGen TOPMed |
|
|
CA8705012 rs761525674 |
651 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA400579866 rs1341681444 |
653 | P>S | No |
ClinGen gnomAD |
|
|
CA292939699 rs374459237 |
654 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs746133219 CA8705009 |
654 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8705010 rs374459237 |
654 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8705008 rs774551066 |
655 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1410830405 CA400579818 |
657 | P>L | No |
ClinGen gnomAD |
|
|
CA8704981 rs779693529 |
658 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8704982 rs779693529 |
658 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8704977 rs757121437 |
659 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA8704978 rs757121437 |
659 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs200808492 CA8704976 |
660 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8704975 rs763978409 |
661 | R>Q | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1215483104 CA400579749 |
661 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA8704974 rs545130754 |
662 | I>T | No |
ClinGen 1000Genomes ExAC |
|
|
rs1196339060 CA400579731 |
663 | L>Q | No |
ClinGen TOPMed |
|
|
CA8704972 rs200615117 |
666 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA400579702 rs1212852606 |
667 | G>D | No |
ClinGen TOPMed |
|
|
rs763053621 CA8704971 |
667 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8704970 rs138285537 |
668 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA292939523 rs943858693 |
671 | G>C | No |
ClinGen Ensembl |
|
|
CA8704969 rs769972059 |
671 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1598348533 CA400579679 |
672 | A>T | No |
ClinGen Ensembl |
|
|
rs114729867 CA400579664 |
674 | I>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs114729867 CA8704967 |
674 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1398402772 CA400579666 |
674 | I>V | No |
ClinGen gnomAD |
|
|
rs1159920034 CA400579639 |
678 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs768950577 CA8704966 |
679 | K>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 680 | A>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8704965 rs140503316 |
681 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA292939494 rs1027154395 |
683 | D>E | No |
ClinGen TOPMed |
|
|
CA8704963 rs771592744 |
683 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400579608 rs771592744 |
683 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778274921 CA8704962 |
684 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8704961 rs778274921 |
684 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8704960 rs756860868 |
685 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1215839914 CA400579592 |
686 | D>N | No |
ClinGen gnomAD |
|
|
CA292939483 rs771488349 |
687 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
rs753764737 CA8704959 |
688 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs1324648548 CA400579555 |
691 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8704957 rs199519029 |
691 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1567751138 CA400579484 |
697 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA8704938 rs770549242 |
698 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1463818966 CA400579462 |
699 | G>R | No |
ClinGen gnomAD |
|
|
CA400579456 rs1356070906 |
699 | G>V | No |
ClinGen gnomAD |
|
|
CA8704936 rs777819059 |
700 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8704937 rs748854023 |
700 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs756071546 CA8704935 |
702 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1184871415 CA400579396 |
705 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
rs780786739 CA8704933 |
706 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1277743994 CA400579375 |
707 | Q>R | No |
ClinGen TOPMed |
|
|
CA292939155 rs528270360 |
710 | K>Q | No |
ClinGen 1000Genomes |
|
|
rs1177347123 CA400579312 |
712 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA400579319 rs1238052675 |
712 | H>Y | No |
ClinGen gnomAD |
|
|
CA400579310 rs754872513 |
713 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8704931 rs369456456 |
713 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8704932 rs754872513 |
713 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1320134338 CA400579303 |
714 | I>L | No |
ClinGen gnomAD |
|
| TCGA novel | 715 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA400579288 rs1294267154 |
715 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1008064105 CA292939110 |
717 | L>* | No |
ClinGen Ensembl |
|
|
rs1396084948 CA400579259 |
718 | P>R | No |
ClinGen gnomAD |
|
|
CA400579262 rs1376278641 |
718 | P>S | No |
ClinGen gnomAD |
|
|
rs115348708 CA8704928 |
719 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| rs769328765 | 722 | K>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8704927 rs764181990 |
722 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400579208 rs1298532717 |
723 | E>G | No |
ClinGen gnomAD |
|
|
rs761111756 CA8704925 |
724 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400579193 rs1347734614 |
725 | E>K | No |
ClinGen gnomAD |
|
|
CA8704924 rs776067240 |
726 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA8704923 rs767767668 |
727 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs542345969 CA8704921 |
728 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8704922 rs760000353 |
728 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs144719287 CA8704919 |
730 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8704918 rs528928402 |
730 | R>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1049792654 CA292939066 |
731 | W>* | No |
ClinGen TOPMed |
|
|
rs375272670 CA8704916 |
732 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8704917 rs142363194 |
732 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA292939050 rs919487167 |
733 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
CA400579112 rs919487167 |
733 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs867373418 CA292939040 |
734 | I>V | No |
ClinGen Ensembl |
|
|
rs1241365453 CA400579086 |
735 | N>S | No |
ClinGen gnomAD |
|
|
CA400579081 rs1307676461 |
736 | A>T | No |
ClinGen gnomAD |
|
|
rs746863615 CA8704913 |
737 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA292939023 rs746863615 |
737 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8704912 rs114804385 |
737 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8704911 rs372171621 |
738 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8704910 rs147658341 |
739 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs866311658 CA292938999 |
740 | K>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA8704909 rs777762622 |
740 | K>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 741 | K>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1028089465 CA292938984 |
747 | A>T | No |
ClinGen Ensembl |
|
|
CA8704907 rs753129174 |
748 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs1431760456 CA400578943 |
750 | K>N | No |
ClinGen gnomAD |
|
|
CA400578939 rs1431923655 |
751 | R>K | No |
ClinGen gnomAD |
|
|
rs1414339221 CA400578924 |
752 | R>S | No |
ClinGen TOPMed |
|
|
rs1211846405 CA400578871 |
753 | M>I | No |
ClinGen TOPMed |
|
|
rs202101775 CA8704875 |
754 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA400578849 rs1268001769 |
756 | R>K | No |
ClinGen gnomAD |
|
|
rs776158956 CA8704872 |
756 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1326720620 CA400578843 |
757 | L>M | No |
ClinGen gnomAD |
|
|
rs1482843115 CA400578839 |
757 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA400578833 rs1598348082 |
758 | E>G | No |
ClinGen Ensembl |
|
|
CA400578836 rs1449888266 |
758 | E>Q | No |
ClinGen gnomAD |
|
|
CA8704870 rs760593139 |
760 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA8704869 rs775471751 |
761 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA292938774 rs113834233 |
763 | K>E | No |
ClinGen Ensembl |
|
|
rs771839522 CA8704868 |
764 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA400578769 rs1394790162 |
764 | A>V | No |
ClinGen gnomAD |
|
|
rs745710009 CA8704867 |
765 | E>D | No |
ClinGen ExAC TOPMed |
|
|
CA8704866 rs777938648 |
766 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA292938769 rs535576913 |
766 | A>T | No |
ClinGen 1000Genomes |
|
|
CA400578752 rs748336705 |
767 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748336705 CA8704864 |
767 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755085080 CA8704863 |
768 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs755085080 CA8704862 |
768 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA400578742 rs1598348059 |
768 | V>M | No |
ClinGen Ensembl |
|
|
rs1217878698 CA400578736 |
769 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
CA8704860 rs115666825 |
769 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs758808221 CA8704859 |
770 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs758808221 CA400578373 |
770 | T>K | No |
ClinGen ExAC gnomAD |
|
|
rs1046696935 CA292938724 |
771 | V>G | No |
ClinGen Ensembl |
|
|
CA8704857 rs765544044 |
772 | D>H | No |
ClinGen ExAC |
|
| TCGA novel | 773 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8704855 rs756877415 |
773 | I>S | No |
ClinGen ExAC gnomAD |
|
|
CA400578310 rs753437920 |
776 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753437920 CA8704854 |
776 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8704852 rs760234926 |
776 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760234926 CA8704853 |
776 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8704849 CA292938666 rs185973898 |
777 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8704850 rs767480122 |
777 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs898084442 CA292938671 |
777 | E>V | No |
ClinGen TOPMed |
|
|
rs1446715814 CA400578299 |
778 | K>R | No |
ClinGen gnomAD |
|
|
rs774079721 CA8704848 |
779 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1567750850 CA400578284 |
781 | Q>* | No |
ClinGen Ensembl |
|
|
CA8704846 rs748401152 |
783 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs776780004 CA8704845 |
783 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA400578260 rs1426579345 |
784 | S>T | No |
ClinGen gnomAD |
|
|
rs201190672 CA8704820 |
788 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs779346380 CA8704818 |
788 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA8704819 rs200242137 |
788 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1477602373 CA400578162 |
790 | G>E | No |
ClinGen TOPMed |
|
|
CA400578167 rs1185352132 |
790 | G>R | No |
ClinGen gnomAD |
|
| TCGA novel | 792 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8704817 rs771304846 |
792 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA400578138 rs1277830325 |
793 | K>E | No |
ClinGen gnomAD |
|
|
rs749652084 CA8704816 |
793 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs377705927 CA8704815 |
795 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377705927 CA8704814 |
795 | K>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1401208010 CA400578107 |
796 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA8704813 rs752355649 |
796 | R>H | Variant assessed as Somatic; 4.621e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs780609940 CA8704812 |
797 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs751496618 CA8704810 |
798 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA8704807 rs750138661 |
801 | V>D | No |
ClinGen ExAC gnomAD |
|
|
rs762982336 CA8704808 |
801 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 803 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1598347927 CA400578044 |
803 | A>V | No |
ClinGen Ensembl |
|
|
rs201755066 CA400578014 |
806 | G>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8704806 rs201755066 |
806 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 806 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs370085151 CA8704805 |
806 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA400578006 rs1205918951 |
807 | V>L | No |
ClinGen gnomAD |
|
|
CA400578008 rs1205918951 |
807 | V>M | No |
ClinGen gnomAD |
|
|
rs1279734350 CA400577992 |
808 | G>A | No |
ClinGen TOPMed |
|
|
CA8704803 rs772264343 |
809 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759584076 CA8704802 |
809 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs1243816525 CA400577979 |
810 | K>E | No |
ClinGen TOPMed |
|
|
CA8704801 rs774889086 |
811 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8704800 rs771302233 |
812 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs749821889 CA8704799 |
812 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs372869515 CA8704797 |
813 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8704798 rs376996404 |
813 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs754457858 CA8704794 |
815 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8704793 rs754457858 |
815 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8704792 rs750995958 |
815 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs750381400 CA400577919 |
816 | G>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs750381400 CA8704789 |
816 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs779641176 CA8704791 |
816 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs750381400 CA8704790 |
816 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767892003 CA8704785 |
818 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA8704784 rs759832303 |
819 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs895432096 CA292938262 |
819 | G>S | No |
ClinGen Ensembl |
|
|
rs774244917 CA8704783 |
820 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA8704782 rs771053578 |
822 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1274034893 CA400577812 |
824 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
rs763299454 CA8704781 |
824 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1245271073 CA400577769 |
828 | M>T | No |
ClinGen gnomAD |
|
|
rs201676074 CA8704780 |
830 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1383511337 CA400577728 |
831 | D>G | No |
ClinGen gnomAD |
|
|
CA400577710 rs1297388737 |
832 | Q>R | No |
ClinGen gnomAD |
|
|
rs1439802345 CA400577664 |
835 | Q>* | No |
ClinGen gnomAD |
|
|
CA8704778 rs770124798 |
837 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs144046237 CA8704776 |
837 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8704777 rs144046237 |
837 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA292938236 rs770124798 |
837 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1165000367 CA400577609 |
839 | E>K | No |
ClinGen gnomAD |
|
|
CA627149124 rs1373332673 |
840 | Q>G | No |
ClinGen gnomAD |
|
|
CA8704774 rs768148368 |
840 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs1214555382 CA400577580 |
840 | Q>P | No |
ClinGen TOPMed |
|
|
CA400577549 rs1175828819 |
841 | K>E | No |
ClinGen gnomAD |
|
|
CA400577545 rs1481834939 |
841 | K>R | No |
ClinGen gnomAD |
|
|
CA400577544 rs1481834939 |
841 | K>T | No |
ClinGen gnomAD |
|
|
CA400577529 rs1567750609 |
842 | K>R | No |
ClinGen Ensembl |
|
|
rs757994274 CA8704771 |
844 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs779042374 CA8704768 |
846 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8704769 rs114763743 |
846 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8704765 rs753644776 |
848 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
No associated diseases with Q8IY81
3 regional properties for Q8IY81
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| chromosome | A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| preribosome, large subunit precursor | A preribosomal complex consisting of 27SA, 27SB, and/or 7S pre-rRNA, 5S rRNA, ribosomal proteins including late-associating large subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic large ribosomal subunit. |
| preribosome, small subunit precursor | A preribosomal complex consisting of 20S pre-rRNA, ribosomal proteins including late-associating small subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic small ribosomal subunit. |
5 GO annotations of molecular function
| Name | Definition |
|---|---|
| RNA 2'-O-methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + RNA = S-adenosyl-L-homocysteine + RNA containing 2'-O-methylribonucleotide. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| RNA methyltransferase activity | Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule. |
| rRNA (guanine) methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing methylguanine. |
| rRNA (uridine-2'-O-)-methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing 2'-O-methyluridine. |
5 GO annotations of biological process
| Name | Definition |
|---|---|
| enzyme-directed rRNA 2'-O-methylation | The addition of methyl groups to the 2'-oxygen atom of nucleotide residues in an rRNA molecule during ribosome biogenesis where the methylase specifies the site that becomes methylated without using a guide RNA. |
| maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. |
| maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript. |
| RNA methylation | Posttranscriptional addition of a methyl group to either a nucleotide or 2'-O ribose in a polyribonucleotide. Usually uses S-adenosylmethionine as a cofactor. |
| rRNA methylation | The posttranscriptional addition of methyl groups to specific residues in an rRNA molecule. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MGKKGKVGKS | RRDKFYHLAK | ETGYRSRSAF | KLIQLNRRFQ | FLQKARALLD | LCAAPGGWLQ |
| 70 | 80 | 90 | 100 | 110 | 120 |
| VAAKFMPVSS | LIVGVDLVPI | KPLPNVVTLQ | QDITTERCRQ | ALRKELKTWK | VDVVLNDGAP |
| 130 | 140 | 150 | 160 | 170 | 180 |
| NVGASWVHDA | YSQAHLTLMA | LRLACDFLAR | GGSFITKVFR | SRDYQPLLWI | FQQLFRRVQA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| TKPQASRHES | AEIFVVCQGF | LAPDKVDSKF | FDPKFAFKEV | EVQAKTVTEL | VTKKKPKAEG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| YAEGDLTLYH | RTSVTDFLRA | ANPVDFLSKA | SEIMVDDEEL | AQHPATTEDI | RVCCQDIRVL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| GRKELRSLLN | WRTKLRRYVA | KKLKEQAKAL | DISLSSGEED | EGDEEDSTAG | TTKQPSKEEE |
| 370 | 380 | 390 | 400 | 410 | 420 |
| EEEEEEQLNQ | TLAEMKAQEV | AELKRKKKKL | LREQRKQRER | VELKMDLPGV | SIADEGETGM |
| 430 | 440 | 450 | 460 | 470 | 480 |
| FSLSTIRGHQ | LLEEVTQGDM | SAADTFLSDL | PRDDIYVSDV | EDDGDDTSLD | SDLDPEELAG |
| 490 | 500 | 510 | 520 | 530 | 540 |
| VRGHQGLRDQ | KRMRLTEVQD | DKEEEEEENP | LLVPLEEKAV | LQEEQANLWF | SKGSFAGIED |
| 550 | 560 | 570 | 580 | 590 | 600 |
| DADEALEISQ | AQLLFENRRK | GRQQQQKQQL | PQTPPSCLKT | EIMSPLYQDE | APKGTEASSG |
| 610 | 620 | 630 | 640 | 650 | 660 |
| TEAATGLEGE | EKDGISDSDS | STSSEEEESW | EPLRGKKRSR | GPKSDDDGFE | IVPIEDPAKH |
| 670 | 680 | 690 | 700 | 710 | 720 |
| RILDPEGLAL | GAVIASSKKA | KRDLIDNSFN | RYTFNEDEGE | LPEWFVQEEK | QHRIRQLPVG |
| 730 | 740 | 750 | 760 | 770 | 780 |
| KKEVEHYRKR | WREINARPIK | KVAEAKARKK | RRMLKRLEQT | RKKAEAVVNT | VDISEREKVA |
| 790 | 800 | 810 | 820 | 830 | 840 |
| QLRSLYKKAG | LGKEKRHVTY | VVAKKGVGRK | VRRPAGVRGH | FKVVDSRMKK | DQRAQQRKEQ |
| KKKHKRK |