Q8IY18
Gene name |
SMC5 (KIAA0594, SMC5L1) |
Protein name |
Structural maintenance of chromosomes protein 5 |
Names |
SMC protein 5, SMC-5, hSMC5 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:23137 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8IY18
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8IY18-F1 | Predicted | AlphaFoldDB |
783 variants for Q8IY18
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| VAR_087971 | 372 | R>del | ATELS2; loss-of-function variant; unable to rescue microcephaly and aberrant craniofacial patterning in zebrafish lacking SMC5; does not relocalize efficiently to sites of laser irradiation-induced DNA damage; loss of interaction with SLF2 and NSMCE2; severely decreased interaction with SMC6 [UniProt] | Yes | UniProt |
| VAR_087972 | 425 | R>del | ATELS2; loss-of-function variant; unable to rescue microcephaly and aberrant craniofacial patterning in zebrafish lacking SMC5; loss of interaction with SLF2, SMC6 and NSMCE2 [UniProt] | Yes | UniProt |
| VAR_087973 | 990 | H>D | ATELS2; loss-of-function variant; unable to rescue microcephaly and aberrant craniofacial patterning in zebrafish lacking SMC5; does not relocalize efficiently to sites of laser irradiation-induced DNA damage; no effect on interaction with SLF2, SMC6 and NSMCE2 [UniProt] | Yes | UniProt |
|
CA5076560 rs772866128 |
2 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs748755647 CA373535503 |
3 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5076561 rs748755647 |
3 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5076564 rs573569022 |
4 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5076563 rs573569022 |
4 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs377294504 CA5076562 |
4 | P>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1292150476 CA373535538 |
5 | S>N | No |
ClinGen gnomAD |
|
|
rs1477251748 CA5076566 |
5 | S>R | No |
ClinGen TOPMed |
|
|
CA5076569 rs760489013 |
8 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 9 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA373535629 rs1475684118 |
10 | T>I | No |
ClinGen gnomAD |
|
|
rs1246126705 CA373535616 |
10 | T>P | No |
ClinGen gnomAD |
|
|
CA193407845 rs777609602 |
11 | P>L | No |
ClinGen Ensembl |
|
|
rs1260087317 CA373535632 |
11 | P>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 13 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs764226528 CA5076570 |
14 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs956687422 CA193407859 |
15 | P>T | No |
ClinGen TOPMed |
|
|
CA5076572 rs369707174 |
16 | S>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5076571 rs369707174 |
16 | S>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs765404627 CA5076573 |
19 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1342654623 CA373535709 |
20 | L>F | No |
ClinGen TOPMed |
|
|
rs1178635323 CA373535710 |
20 | L>R | No |
ClinGen gnomAD |
|
|
rs1403158222 CA373535715 |
21 | P>S | No |
ClinGen gnomAD |
|
|
rs867991356 CA193407876 |
22 | R>K | No |
ClinGen TOPMed |
|
|
rs1228986640 CA373535731 |
23 | D>E | No |
ClinGen TOPMed |
|
|
CA373535736 rs1322299354 |
24 | P>H | No |
ClinGen TOPMed gnomAD |
|
|
rs750467996 CA5076574 |
25 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs139961466 CA193407919 |
25 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA5076575 rs139961466 |
25 | S>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA373535746 rs1335785876 |
26 | S>W | No |
ClinGen TOPMed |
|
|
rs555737117 CA5076578 |
27 | E>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs781406957 CA373535753 |
27 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA5076577 rs113096629 |
27 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5076580 rs143533000 |
28 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA373535760 rs573926581 |
29 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA373535763 rs1218657200 |
29 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA373535762 rs1218657200 |
29 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA5076582 rs573926581 |
29 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 33 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 34 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA373535821 rs1187986237 |
35 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA373535813 rs1187986237 |
35 | S>W | No |
ClinGen TOPMed gnomAD |
|
|
CA5076586 rs367721215 |
36 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5076588 rs776264120 |
37 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA5076587 rs200212160 |
37 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5076590 CA5076591 rs765334362 |
38 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs762133367 CA5076589 |
38 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs758418368 CA5076592 |
40 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs758418368 CA373536141 |
40 | P>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 40 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs780256240 CA373536147 |
41 | L>M | No |
ClinGen gnomAD |
|
|
CA373536149 rs780256240 |
41 | L>V | No |
ClinGen gnomAD |
|
|
rs752130710 CA5076595 |
42 | L>W | No |
ClinGen ExAC TOPMed |
|
|
rs755428493 CA5076596 |
44 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs781657426 CA5076597 |
45 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA193408031 rs932986155 |
45 | S>P | No |
ClinGen Ensembl |
|
|
rs756955104 CA5076599 |
46 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748432536 CA5076598 |
46 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs745376589 CA5076601 |
47 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779694157 CA373536304 CA5076603 |
48 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373536331 rs1587604760 |
49 | V>G | No |
ClinGen Ensembl |
|
|
rs1156288563 CA373536319 |
49 | V>L | No |
ClinGen gnomAD |
|
|
rs1051471288 CA373536430 |
52 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1051471288 CA193408088 |
52 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs776518504 CA5076606 |
52 | S>T | No |
ClinGen ExAC |
|
|
CA5076607 rs372744651 |
53 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1321710223 CA373536484 |
54 | V>A | No |
ClinGen TOPMed |
|
|
CA373536472 rs1340241870 |
54 | V>F | No |
ClinGen TOPMed |
|
|
CA373536528 rs1459166494 |
55 | R>L | No |
ClinGen TOPMed |
|
|
rs770019765 CA5076608 |
57 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs1308587747 CA373536605 |
58 | M>I | No |
ClinGen gnomAD |
|
|
CA5076609 rs773360678 |
58 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1257573182 CA373536674 |
62 | L>Q | No |
ClinGen gnomAD |
|
|
rs769648646 CA5076625 |
64 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5076626 rs145189328 |
66 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1194910276 CA373538017 |
67 | C>Y | No |
ClinGen gnomAD |
|
|
CA373538039 rs1426164459 |
69 | V>I | No |
ClinGen gnomAD |
|
|
CA5076627 rs199831056 |
71 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5076628 rs771111743 |
71 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs199831056 CA373538063 |
71 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA373538090 rs1362322203 |
73 | P>L | No |
ClinGen gnomAD |
|
|
CA5076630 rs759486297 |
73 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753210977 CA5076632 |
74 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs575090507 CA5076631 |
74 | H>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5076633 rs142274911 |
77 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs764599446 CA5076634 |
78 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5076635 rs554912542 |
79 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1321944767 CA373538224 |
83 | G>A | No |
ClinGen gnomAD |
|
|
rs758152854 COSM285210 CA5076636 |
87 | S>L | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA373538319 rs1488452114 |
90 | V>A | No |
ClinGen gnomAD |
|
|
CA193411895 rs955663066 |
91 | C>Y | No |
ClinGen TOPMed |
|
|
rs563696904 CA5076638 |
95 | L>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1189711630 CA373538410 |
96 | G>A | No |
ClinGen TOPMed |
|
|
CA5076640 rs780754186 |
99 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1425746415 CA373538526 |
106 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
rs756024882 CA5076642 |
107 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs756077543 CA5076663 |
110 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373540039 rs1314252035 |
110 | V>I | No |
ClinGen gnomAD |
|
|
rs777639863 CA5076664 |
112 | F>I | No |
ClinGen ExAC gnomAD |
|
|
CA373540114 rs1458362269 |
114 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA5076665 rs749097179 |
116 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA5076666 rs757108083 |
118 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA193414556 rs757108083 |
118 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA5076668 rs200964468 |
119 | S>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5076667 rs368982485 |
119 | S>P | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1416013981 CA373540255 |
120 | R>G | No |
ClinGen gnomAD |
|
|
CA373540317 rs1188620387 |
122 | M>T | No |
ClinGen Ensembl |
|
|
CA5076671 rs747033233 |
125 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1397659303 CA373542464 |
128 | F>S | No |
ClinGen gnomAD |
|
|
CA193422084 rs997951844 |
129 | R>K | No |
ClinGen TOPMed |
|
|
rs1438375878 CA373542474 |
130 | A>T | No |
ClinGen TOPMed |
|
|
rs763588735 CA5076681 |
133 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373542501 rs1564025743 |
134 | L>I | No |
ClinGen Ensembl |
|
|
CA5076682 rs753829381 |
135 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5076683 rs116486194 |
136 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed |
|
|
CA373542520 rs1341448475 |
137 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA373542519 rs1341448475 |
137 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA5076684 rs778612425 |
138 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA5076685 rs778612425 |
138 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5076686 rs758566983 |
139 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA5076687 rs377344787 |
140 | I>T | No |
ClinGen ESP ExAC gnomAD |
|
|
CA373542547 rs1210548043 |
142 | V>M | No |
ClinGen gnomAD |
|
|
rs1453278595 CA373542555 |
143 | A>T | No |
ClinGen gnomAD |
|
|
CA5076690 rs768925921 |
144 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1016767897 CA193422216 |
145 | N>D | No |
ClinGen TOPMed |
|
|
rs781411396 CA5076691 |
145 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1016767897 CA193422220 |
145 | N>Y | No |
ClinGen TOPMed |
|
|
rs748717368 CA5076692 |
150 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1415286229 CA373542688 |
152 | N>K | No |
ClinGen gnomAD |
|
|
CA373542683 rs1163360700 |
152 | N>S | No |
ClinGen gnomAD |
|
|
rs770307620 CA5076693 |
155 | S>P | No |
ClinGen ExAC |
|
|
CA373542733 rs1390910028 |
155 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1263515446 CA373542740 |
156 | T>A | No |
ClinGen Ensembl |
|
|
CA5076694 rs773480446 |
158 | Q>* | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 158 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5076695 rs763328847 |
160 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA373542788 rs1303011038 |
160 | I>V | No |
ClinGen gnomAD |
|
|
CA373542829 rs1296701673 |
163 | E>D | No |
ClinGen gnomAD |
|
|
CA373542815 rs1402314436 |
163 | E>K | No |
ClinGen gnomAD |
|
|
rs73647452 CA5076696 |
166 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA373542867 rs1468488199 |
166 | A>V | No |
ClinGen TOPMed |
|
|
rs1245732791 CA373542871 |
167 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1245732791 CA373542872 |
167 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA5076697 rs775058406 |
170 | I>V | No |
ClinGen ExAC |
|
|
rs760306031 CA5076698 |
173 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs370425906 CA5076700 |
175 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5076701 rs554882406 |
177 | Q>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA373542962 rs1488559229 |
177 | Q>H | No |
ClinGen gnomAD |
|
|
rs554703284 CA5076719 |
184 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5076720 rs765087308 |
187 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA5076721 rs147082288 |
188 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 188 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA373543596 rs1466937568 |
191 | S>R | No |
ClinGen gnomAD |
|
|
rs1587631155 CA373543622 |
194 | E>* | No |
ClinGen Ensembl |
|
|
rs1587631164 CA373543630 |
194 | E>D | No |
ClinGen Ensembl |
|
|
CA5076724 rs751372821 |
196 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs767799540 CA5076726 |
197 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA5076727 rs752734540 |
200 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs756153062 CA5076728 |
201 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1304862861 CA373543727 |
203 | I>T | No |
ClinGen gnomAD |
|
|
rs777712042 CA5076729 |
203 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373543735 rs1564026579 |
204 | G>C | No |
ClinGen Ensembl |
|
|
CA373543737 rs1176931598 |
204 | G>D | No |
ClinGen TOPMed |
|
|
rs1375876221 CA373543757 |
206 | P>S | No |
ClinGen TOPMed |
|
|
rs543721467 CA5076730 |
207 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs565313750 CA5076731 |
208 | M>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA373543787 rs1320994833 |
209 | H>Y | No |
ClinGen gnomAD |
|
|
rs532380112 CA5076733 |
210 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA193423237 rs532380112 |
210 | K>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5076735 rs768306620 |
211 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA5076734 rs746177713 |
211 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA5076736 rs776196254 |
216 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1176197599 CA373543873 |
216 | K>R | No |
ClinGen TOPMed |
|
|
rs1457063014 CA373543892 |
217 | N>S | No |
ClinGen TOPMed |
|
|
rs747749280 CA5076737 |
218 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1487777760 CA373543920 |
220 | E>K | No |
ClinGen gnomAD |
|
|
rs377310638 CA193423288 |
224 | Q>H | No |
ClinGen Ensembl |
|
|
CA5076739 rs772577034 |
225 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373543995 rs1171582964 |
225 | L>P | No |
ClinGen gnomAD |
|
|
rs141003657 CA5076742 |
226 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA373544454 rs1394429830 |
228 | S>L | No |
ClinGen Ensembl |
|
|
CA373544460 rs1204816423 |
229 | C>R | No |
ClinGen TOPMed |
|
|
rs1186080125 CA373544491 |
230 | K>N | No |
ClinGen gnomAD |
|
|
rs1357288752 CA373544526 |
232 | K>N | No |
ClinGen TOPMed |
|
|
rs750984226 CA5076768 |
232 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs142628186 CA193425196 |
233 | T>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA5076772 rs755814439 |
238 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1015277083 CA193425231 |
240 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA5076773 rs777238105 |
243 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA5076774 rs371519470 |
244 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5076775 rs770635107 |
245 | R>I | No |
ClinGen ExAC gnomAD |
|
|
CA5076777 rs367630327 |
246 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs150260127 CA5076776 |
246 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs376696894 CA5076778 |
247 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs138944931 CA193425252 |
247 | K>N | No |
ClinGen ESP |
|
|
rs1167557674 CA373544811 |
250 | V>A | No |
ClinGen TOPMed |
|
|
rs745416787 CA193425254 |
253 | F>L | No |
ClinGen Ensembl |
|
|
CA193425267 rs921161773 |
254 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs768926946 CA5076782 COSM195621 |
256 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs761109273 CA5076781 |
256 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs1052768752 COSM1659932 CA193425299 |
258 | R>* | kidney [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs1181848923 CA373544956 |
258 | R>Q | No |
ClinGen gnomAD |
|
|
CA5076783 rs369776321 |
262 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 266 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs769381374 CA193426569 |
275 | Y>C | No |
ClinGen Ensembl |
|
|
rs773303099 CA5076805 |
278 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs997124254 CA193426579 |
279 | R>H | No |
ClinGen TOPMed |
|
|
CA373545670 rs1442063640 |
280 | Q>R | No |
ClinGen gnomAD |
|
| TCGA novel | 281 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 283 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs149237018 CA5076807 |
288 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5076806 rs762963288 |
288 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
COSM1109768 CA5076808 rs774791360 |
289 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs369127149 CA5076809 |
289 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA5076810 rs767823137 |
290 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1318835875 CA373545733 |
290 | D>N | No |
ClinGen gnomAD |
|
|
rs753069227 CA5076811 |
291 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756988546 CA5076812 |
291 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs764920716 CA5076813 |
292 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372483568 CA373545775 |
296 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 296 | V>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs372483568 CA5076814 |
296 | V>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs767679887 CA193426627 |
296 | V>I | No |
ClinGen gnomAD |
|
|
CA373545772 rs767679887 |
296 | V>L | No |
ClinGen gnomAD |
|
|
CA5076818 rs779601986 |
300 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746967130 CA5076819 |
301 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1477930515 CA373545804 |
301 | E>K | No |
ClinGen gnomAD |
|
|
rs1481215919 CA373545811 |
302 | G>R | No |
ClinGen TOPMed |
|
|
CA5076820 rs1180116 VAR_029824 |
306 | V>I | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1166185121 CA373545844 |
307 | T>A | No |
ClinGen gnomAD |
|
|
CA5076821 rs780998162 |
307 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs142489701 CA373545850 |
308 | C>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
VAR_029825 CA5076822 rs1180117 |
308 | C>R | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs142489701 CA5076823 |
308 | C>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA373545855 rs1341391383 |
309 | R>* | Variant assessed as Somatic; 0.0001397 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs145999559 COSM1462795 CA5076824 |
309 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA5076825 rs749526425 |
311 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA5076826 rs770977626 |
312 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs1587637475 CA373545886 |
313 | M>I | No |
ClinGen Ensembl |
|
|
rs774470627 CA5076827 |
313 | M>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774470627 CA373545883 |
313 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs75873820 CA193426749 |
315 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5076829 rs142655034 |
317 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5076830 rs115131883 |
317 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1173920259 CA373545944 |
321 | E>D | No |
ClinGen TOPMed |
|
|
rs1447223529 CA373545950 |
322 | A>V | No |
ClinGen gnomAD |
|
|
rs764544652 CA5076832 |
323 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA5076833 rs141264576 |
326 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5076874 rs776884389 |
330 | D>A | No |
ClinGen ExAC gnomAD |
|
|
CA373546468 rs776884389 |
330 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA373546466 rs776884389 |
330 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA5076875 rs762182423 |
331 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs200623827 CA373546525 |
336 | Q>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5076876 rs200623827 |
336 | Q>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1469392472 CA373546534 |
337 | K>I | No |
ClinGen gnomAD |
|
|
CA373546536 rs1305150033 |
337 | K>N | No |
ClinGen TOPMed |
|
|
rs1406592669 CA373546537 |
338 | C>S | No |
ClinGen TOPMed |
|
|
rs1477177946 CA373546546 |
339 | K>E | No |
ClinGen gnomAD |
|
|
CA373546568 rs1172195598 |
341 | K>N | No |
ClinGen gnomAD |
|
|
CA5076878 rs759179865 |
342 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs752175461 CA5076880 |
345 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5076879 rs150785894 |
345 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1047619055 CA193429380 |
350 | K>T | No |
ClinGen TOPMed |
|
|
CA5076881 rs760641227 |
351 | H>N | No |
ClinGen ExAC gnomAD |
|
|
CA373547919 rs1587658468 |
354 | E>* | No |
ClinGen Ensembl |
|
|
rs1256802348 CA373547971 |
357 | Q>H | No |
ClinGen gnomAD |
|
|
CA373547967 rs1449386536 |
357 | Q>R | No |
ClinGen TOPMed |
|
|
CA193438839 rs549857669 |
360 | I>M | No |
ClinGen Ensembl |
|
|
rs368177263 CA5076898 |
360 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs771675765 CA5076897 |
360 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1196043137 CA373548011 |
361 | V>I | No |
ClinGen TOPMed |
|
|
CA5076900 rs763505099 |
363 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776684676 CA5076901 |
363 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373548032 rs763505099 |
363 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1187276623 CA373548050 |
364 | N>S | No |
ClinGen gnomAD |
|
|
CA373548091 rs1426879889 |
367 | L>F | No |
ClinGen gnomAD |
|
|
CA5076902 rs761629867 |
367 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs776132409 CA193438872 |
368 | D>G | No |
ClinGen gnomAD |
|
|
CA373548113 rs1425167449 |
369 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA373548111 rs1425167449 |
369 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs996068745 CA193438886 |
371 | R>K | No |
ClinGen TOPMed |
|
|
rs1363411506 CA373548152 |
372 | R>K | No |
ClinGen gnomAD |
|
|
CA373548161 rs1457106997 |
373 | I>V | No |
ClinGen gnomAD |
|
|
rs1028862305 CA193438901 |
374 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1028862305 CA373548181 |
374 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA373548205 rs1393387589 |
376 | T>N | No |
ClinGen TOPMed |
|
|
CA373548215 rs1380078737 |
377 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA5076903 rs765120179 |
377 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765120179 CA373548220 |
377 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1248726754 CA373548251 |
379 | M>I | No |
ClinGen gnomAD |
|
|
rs750203173 CA5076904 |
379 | M>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750203173 CA373548245 |
379 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1395390317 CA373548260 |
380 | I>T | No |
ClinGen TOPMed |
|
|
CA5076905 rs758714474 |
381 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs1290066337 COSM3848703 CA373548265 |
381 | E>K | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs149767452 CA5076906 |
387 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA373548363 rs1376608948 |
388 | K>E | No |
ClinGen TOPMed |
|
|
rs1376608948 CA373548367 |
388 | K>Q | No |
ClinGen TOPMed |
|
|
CA5076909 rs781119761 |
390 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs748742214 CA5076910 |
390 | T>M | No |
ClinGen ExAC gnomAD |
|
|
CA193438977 rs923628836 |
391 | E>K | No |
ClinGen Ensembl |
|
|
CA373548419 rs1203996274 |
392 | N>D | No |
ClinGen TOPMed |
|
|
CA373548436 rs1486205058 |
393 | C>R | No |
ClinGen TOPMed |
|
|
CA5076914 rs749608121 |
393 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5076912 rs746214689 |
393 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775187225 CA5076915 |
394 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs746647548 CA5076916 |
395 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373548994 rs1280612437 |
395 | N>I | No |
ClinGen TOPMed |
|
|
rs746647548 CA373548461 |
395 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5076917 rs768258324 |
400 | I>F | No |
ClinGen ExAC gnomAD |
|
|
CA373549090 rs775971596 |
400 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA5076918 rs775971596 |
400 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA373549078 rs768258324 |
400 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1241332440 CA373549113 |
401 | D>V | No |
ClinGen TOPMed |
|
|
CA5076919 rs372127112 |
402 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5076920 rs765033936 |
403 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA373549146 rs1224737786 |
404 | T>A | No |
ClinGen gnomAD |
|
|
rs116117325 CA5076921 |
405 | N>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA373549156 rs116117325 |
405 | N>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA373549173 rs762770470 |
406 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs762770470 CA5076922 |
406 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs373553140 CA5076924 |
409 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA5076923 rs149041769 |
409 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA373549243 rs1564040169 |
411 | Q>P | No |
ClinGen Ensembl |
|
| TCGA novel | 411 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1587659088 CA373549298 |
415 | A>T | No |
ClinGen Ensembl |
|
|
CA373549346 rs367752231 |
417 | C>* | No |
ClinGen ESP TOPMed |
|
|
CA373549341 rs535923143 |
417 | C>F | No |
ClinGen ExAC gnomAD |
|
|
rs767679494 CA373549332 |
417 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767679494 CA5076926 |
417 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5076927 rs535923143 |
417 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs778198722 CA5076929 |
420 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs754335348 CA5076930 |
422 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA5076931 rs757674121 |
424 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA373549486 rs1429544702 |
425 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs779223347 CA5076932 |
425 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs375658827 CA5076933 |
428 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5076934 rs768152761 |
431 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772545049 CA193439162 |
431 | L>R | No |
ClinGen Ensembl |
|
|
CA5076935 rs768152761 |
431 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 433 | K>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5076936 rs747551777 |
435 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1300272216 CA373549668 |
435 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1409653009 CA373549897 |
438 | V>L | No |
ClinGen gnomAD |
|
|
rs754670445 CA5076955 |
439 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5076958 rs377286227 |
440 | D>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs747834065 CA5076957 |
440 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5076959 rs777402526 |
443 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA5076960 rs147695278 |
444 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5076961 rs369578475 |
444 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1181762348 CA373550028 |
445 | F>C | No |
ClinGen TOPMed |
|
|
rs142488686 CA5076962 |
447 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA373550104 rs1258838947 |
449 | M>I | No |
ClinGen TOPMed |
|
|
CA193441065 rs992409333 |
449 | M>T | No |
ClinGen Ensembl |
|
|
CA5076963 rs759197955 |
450 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1490740448 CA373550190 |
454 | D>G | No |
ClinGen gnomAD |
|
|
CA5076965 rs775628286 |
454 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs143352428 CA5076967 |
455 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5076966 rs143352428 |
455 | K>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372120847 CA5076971 |
461 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5076972 rs750803383 |
461 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs750803383 CA5076973 |
461 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372120847 CA193441131 |
461 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA193441147 rs751992422 |
462 | D>G | No |
ClinGen gnomAD |
|
|
CA373550351 rs1423113264 |
465 | D>N | No |
ClinGen gnomAD |
|
| TCGA novel | 466 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA373550369 rs1432745352 |
466 | A>T | No |
ClinGen Ensembl |
|
|
rs752342125 CA5076975 |
466 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA373550423 rs1404648445 |
469 | W>C | No |
ClinGen TOPMed |
|
|
rs200888007 CA193441218 |
469 | W>R | No |
ClinGen TOPMed |
|
|
rs1587662492 CA373550709 |
470 | L>P | No |
ClinGen Ensembl |
|
|
rs748761978 CA5076978 |
472 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA373550747 rs1320840652 |
473 | N>S | No |
ClinGen TOPMed |
|
|
rs757278111 CA5076980 |
474 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778653098 CA5076981 |
475 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs745801031 CA5076982 |
477 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs771807400 CA5076983 |
478 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 480 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1288752425 CA373550840 |
480 | R>T | No |
ClinGen gnomAD |
|
|
CA373550848 rs1424439222 |
481 | V>I | No |
ClinGen gnomAD |
|
|
rs1217350614 CA373550867 |
482 | C>S | No |
ClinGen gnomAD |
|
|
rs1184810384 CA373550911 |
485 | I>M | No |
ClinGen gnomAD |
|
|
rs1449407461 CA373550902 |
485 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs775321158 CA5076984 |
486 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA5076985 rs151317759 |
488 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA373552007 rs1408250174 |
490 | N>H | No |
ClinGen gnomAD |
|
|
rs952659465 CA193445788 |
490 | N>K | No |
ClinGen Ensembl |
|
|
CA193445757 rs1026800373 |
490 | N>S | No |
ClinGen gnomAD |
|
|
CA373552015 rs1026800373 |
490 | N>T | No |
ClinGen gnomAD |
|
|
rs1333276596 CA373552037 |
491 | M>T | No |
ClinGen gnomAD |
|
|
CA5077000 rs778459728 |
493 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1472263065 CA373552078 |
493 | D>V | No |
ClinGen TOPMed |
|
|
rs1444100992 CA373552124 |
496 | N>H | No |
ClinGen gnomAD |
|
| TCGA novel | 496 | N>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745828965 CA5077001 |
496 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs115446160 CA5077002 |
500 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs779732073 CA5077003 |
502 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA373552254 rs1254818835 |
503 | H>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs746747695 CA5077004 |
504 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA5077005 rs768868913 |
508 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA5077006 rs776904659 |
510 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773311181 CA5077009 |
517 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA5077011 rs766863833 |
520 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA5077010 rs763402962 |
520 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1564046790 CA373552578 |
523 | F>S | No |
ClinGen Ensembl |
|
|
CA373552598 rs1287926093 |
525 | K>E | No |
ClinGen gnomAD |
|
| TCGA novel | 525 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1465595385 CA373552602 |
525 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 526 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs927948213 CA193406823 |
527 | V>I | No |
ClinGen TOPMed |
|
|
CA373534399 COSM1109772 rs1369660346 |
528 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs780943140 CA5077026 |
528 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373534406 rs1490167069 |
529 | D>N | No |
ClinGen TOPMed |
|
|
CA5077027 rs748409663 |
530 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA5077028 rs369039572 |
530 | N>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1385782469 CA373534434 |
531 | K>E | No |
ClinGen gnomAD |
|
| TCGA novel | 532 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5077029 rs777738506 |
534 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA373534553 rs1328712508 |
538 | V>G | No |
ClinGen gnomAD |
|
|
rs749335405 CA373534555 |
539 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA5077030 rs749335405 |
539 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs775069851 CA5077032 |
542 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA5077033 rs544056515 |
542 | K>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA373534607 rs544056515 |
542 | K>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA373534619 rs1263948530 |
543 | S>N | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 544 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA373534651 rs1271896934 |
545 | Y>F | No |
ClinGen TOPMed |
|
|
rs756202176 CA5077035 |
548 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764882867 CA5077038 |
549 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs137909778 CA373534706 |
549 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5077036 rs137909778 |
549 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs764882867 CA5077037 |
549 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373534736 rs1310388556 |
551 | S>P | No |
ClinGen TOPMed |
|
|
rs1408123722 CA373534746 COSM1266261 |
552 | R>G | oesophagus [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA5077039 rs762589335 |
552 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA373534766 rs1418254117 |
553 | S>Y | No |
ClinGen gnomAD |
|
| TCGA novel | 554 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA373534816 rs1445061448 |
555 | N>S | No |
ClinGen gnomAD |
|
|
CA373534867 rs1353990633 |
557 | L>P | No |
ClinGen TOPMed |
|
|
CA5077040 rs765793773 |
557 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA5077042 rs565461607 |
558 | K>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5077059 rs765915222 |
559 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA373535079 rs1205432693 |
561 | G>E | No |
ClinGen TOPMed |
|
|
CA5077061 rs759492902 |
561 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373535094 rs1352765114 |
562 | F>L | No |
ClinGen TOPMed |
|
| TCGA novel | 563 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1482827727 CA373535151 |
565 | Y>* | No |
ClinGen gnomAD |
|
| TCGA novel | 565 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA373535140 rs1587683949 |
565 | Y>N | No |
ClinGen Ensembl |
|
|
rs752442353 CA5077063 |
567 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA373535181 rs1301643844 |
568 | E>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 570 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA373535214 rs1253546739 |
570 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs756007157 CA5077064 |
570 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1180829422 CA373535241 |
572 | A>T | No |
ClinGen gnomAD |
|
|
rs1429305720 CA373535254 |
573 | P>S | No |
ClinGen gnomAD |
|
|
CA5077065 rs373366303 |
578 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5077066 rs754143386 |
579 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373535346 rs754143386 |
579 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5077068 rs779152849 |
583 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA5077069 rs745883002 |
584 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373535428 rs1348897842 |
585 | H>R | No |
ClinGen gnomAD |
|
|
CA373535477 rs1409369862 |
588 | E>V | No |
ClinGen gnomAD |
|
|
CA5077071 rs780771664 |
591 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA373535552 rs1383523400 COSM1314893 |
594 | E>K | Variant assessed as Somatic; impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1217517897 CA373535570 |
595 | K>T | No |
ClinGen gnomAD |
|
|
rs201289280 CA5077072 |
597 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5077073 rs769112727 |
600 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA5077076 rs770523017 |
602 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749001730 CA5077075 |
602 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373535827 rs1486488274 |
604 | I>M | No |
ClinGen gnomAD |
|
|
CA373535822 rs1245556901 |
604 | I>V | No |
ClinGen gnomAD |
|
|
rs778605838 CA5077095 |
606 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs745509783 CA5077096 |
608 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1164552402 CA373535872 |
611 | Q>R | No |
ClinGen gnomAD |
|
| TCGA novel | 612 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774836266 CA5077098 |
612 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA5077099 rs548676384 |
615 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5077101 rs776487311 |
623 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1564056386 CA373536881 |
627 | S>A | No |
ClinGen Ensembl |
|
|
CA5077103 rs761764905 |
628 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs765108692 CA5077104 |
629 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA373536950 rs1227425013 |
631 | I>T | No |
ClinGen gnomAD |
|
|
CA5077105 rs750722320 |
631 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1426402865 CA373536987 |
633 | S>G | No |
ClinGen TOPMed |
|
|
rs1032000219 CA193408482 |
633 | S>T | No |
ClinGen Ensembl |
|
|
CA5077106 rs763235374 |
635 | T>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 636 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5077108 rs751544317 |
637 | L>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 640 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781486693 CA5077110 |
641 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA373537120 rs1210030041 |
642 | F>C | No |
ClinGen gnomAD |
|
|
CA5077112 rs756531864 |
647 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5077113 rs778092460 |
650 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA193408530 rs1009293830 COSM1625058 |
651 | Q>H | liver [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA193408527 rs1023663904 |
651 | Q>R | No |
ClinGen TOPMed |
|
| TCGA novel | 652 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745564759 CA5077115 |
653 | R>T | No |
ClinGen ExAC gnomAD |
|
|
rs771659629 CA5077116 |
654 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs779626475 CA5077117 |
656 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs138593664 CA193408554 |
658 | Q>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5077118 rs138593664 |
658 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA193408563 rs73456610 |
659 | L>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA373537355 rs1301271426 |
660 | K>N | No |
ClinGen TOPMed |
|
|
CA373537408 rs1349408695 |
662 | I>V | No |
ClinGen gnomAD |
|
|
CA193408666 rs144566039 |
663 | H>R | No |
ClinGen ESP TOPMed |
|
|
CA5077145 rs368735744 |
664 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 666 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs954547752 CA193408681 |
667 | Q>H | No |
ClinGen TOPMed |
|
|
rs770757188 COSM223333 CA5077146 |
668 | A>T | skin [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA5077147 rs774497211 |
670 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA373537460 rs1275717597 |
670 | D>N | No |
ClinGen gnomAD |
|
|
CA193408698 rs909908245 |
672 | G>R | No |
ClinGen Ensembl |
|
|
rs759785349 CA5077148 |
677 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA373537506 rs759785349 |
677 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1251355203 CA373537507 |
677 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs767536996 CA5077149 |
680 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs1428146980 CA373537536 |
681 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA373537542 rs11142365 |
682 | H>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5077150 VAR_061869 rs11142365 |
682 | H>R | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs747775103 CA193408724 |
682 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA373537578 rs1476961893 |
687 | D>G | No |
ClinGen gnomAD |
|
|
CA193408739 rs907671093 |
688 | N>D | No |
ClinGen Ensembl |
|
|
rs761179104 CA5077151 |
688 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs764515103 CA5077152 |
690 | L>I | No |
ClinGen ExAC gnomAD |
|
|
CA373537599 rs1431392633 |
690 | L>P | No |
ClinGen gnomAD |
|
|
rs748788617 CA5077154 |
696 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1386869825 CA373537665 |
696 | E>V | No |
ClinGen gnomAD |
|
| TCGA novel | 697 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5077155 rs765611246 |
698 | L>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 701 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA373537745 rs1233090559 |
701 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
rs551665441 CA5077156 |
702 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA193408762 rs567018664 |
702 | T>I | No |
ClinGen 1000Genomes |
|
|
rs567018664 CA373537759 |
702 | T>N | No |
ClinGen 1000Genomes |
|
| TCGA novel | 702 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs780880319 CA5077158 |
705 | R>I | No |
ClinGen ExAC gnomAD |
|
|
CA5077159 rs377339585 |
708 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA373537884 rs1256730188 |
712 | S>N | No |
ClinGen TOPMed |
|
|
rs756133746 CA5077160 |
716 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1193000938 CA373537954 |
717 | S>G | No |
ClinGen gnomAD |
|
|
CA373539598 rs1391473119 |
718 | L>S | No |
ClinGen gnomAD |
|
|
rs1288782599 CA373539663 |
721 | M>I | No |
ClinGen gnomAD |
|
|
rs1433454651 CA373539652 |
721 | M>V | No |
ClinGen gnomAD |
|
|
CA373539749 rs1587693022 |
725 | T>I | No |
ClinGen Ensembl |
|
|
CA5077184 rs780323844 |
726 | C>F | No |
ClinGen ExAC gnomAD |
|
|
rs771845452 CA5077183 |
726 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA5077185 rs747203351 |
726 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373539791 rs1162733084 |
727 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA5077188 rs776725660 |
729 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1379425772 CA373539916 |
733 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs59648118 RCV000947177 CA5077191 |
733 | R>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA5077192 rs763432893 |
735 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA5077193 rs766844934 |
736 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA373539953 rs1253672709 |
737 | T>I | No |
ClinGen gnomAD |
|
|
CA5077194 rs201085538 |
742 | I>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1413602263 CA373540038 |
743 | N>S | No |
ClinGen gnomAD |
|
|
CA193411729 rs934992948 |
744 | V>A | No |
ClinGen TOPMed |
|
|
CA5077195 rs760378911 |
747 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA373540140 rs1360229130 |
748 | K>E | No |
ClinGen gnomAD |
|
|
rs757142205 CA5077198 |
750 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1248366327 CA373540222 |
751 | T>I | No |
ClinGen TOPMed |
|
|
CA5077199 rs367632988 |
752 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA373540311 rs1564059992 |
755 | N>D | No |
ClinGen Ensembl |
|
|
CA5077200 CA373540343 rs577507828 |
755 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs139825108 CA193411765 |
756 | L>R | No |
ClinGen ESP |
|
|
rs1223266707 CA373540381 |
757 | I>M | No |
ClinGen gnomAD |
|
|
CA193411776 rs951856515 |
757 | I>R | No |
ClinGen Ensembl |
|
|
CA5077201 rs758232187 |
757 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA5077217 rs753296981 |
759 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1326083670 CA373540554 |
760 | C>Y | No |
ClinGen TOPMed |
|
|
CA373540623 rs370470042 |
764 | H>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370470042 CA5077222 |
764 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs758285133 CA5077221 |
764 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs892515654 CA373540631 |
765 | I>L | No |
ClinGen TOPMed gnomAD |
|
|
CA193411984 rs892515654 |
765 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs751289591 CA5077223 |
767 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373540744 rs1489168254 |
771 | I>L | No |
ClinGen gnomAD |
|
|
rs375626595 CA5077225 |
774 | N>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs546879358 CA5077226 |
775 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1564060326 CA373540826 |
776 | T>A | No |
ClinGen Ensembl |
|
|
CA5077228 rs756256869 |
778 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA5077230 rs749833143 |
779 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1019789332 CA193412027 |
780 | E>A | No |
ClinGen gnomAD |
|
|
rs771522033 CA5077232 |
781 | K>N | No |
ClinGen ExAC |
|
|
CA373540945 rs1400272193 |
783 | K>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 785 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1434353444 CA373541074 |
789 | M>V | No |
ClinGen gnomAD |
|
|
CA373541102 rs146040116 |
791 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5077234 rs146040116 |
791 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA373541131 rs1360914285 |
793 | S>P | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 794 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1435582053 CA373541163 |
795 | L>H | No |
ClinGen gnomAD |
|
|
rs772322636 CA5077235 |
796 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs183526530 CA5077236 |
796 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs374927227 CA5077237 |
797 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5077239 rs772670596 |
799 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5077259 rs201420907 |
802 | F>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 804 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 807 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5077261 rs765868555 |
810 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA373546731 rs1176548466 |
810 | Q>R | No |
ClinGen gnomAD |
|
|
rs561321099 CA193425266 |
811 | R>T | No |
ClinGen Ensembl |
|
|
rs774312663 CA5077262 |
813 | L>* | No |
ClinGen ExAC gnomAD |
|
|
CA5077263 rs759367574 |
815 | K>I | No |
ClinGen ExAC gnomAD |
|
|
rs1050298776 CA193425306 |
817 | K>R | No |
ClinGen gnomAD |
|
|
CA373546780 rs1050298776 |
817 | K>T | No |
ClinGen gnomAD |
|
|
rs767366494 CA5077264 |
820 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA373546817 rs1375770047 |
822 | R>T | No |
ClinGen Ensembl |
|
|
CA373546825 rs1382666428 |
823 | A>G | No |
ClinGen gnomAD |
|
|
CA5077265 rs752391450 |
825 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373546836 rs1334522903 |
825 | Q>P | No |
ClinGen gnomAD |
|
|
rs1587717825 CA373546872 |
830 | G>A | No |
ClinGen Ensembl |
|
|
rs1353584580 CA373546876 |
831 | A>S | No |
ClinGen TOPMed |
|
|
rs374680348 CA5077266 |
831 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs764161081 CA5077267 |
832 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1320251759 CA373546911 |
836 | P>L | No |
ClinGen TOPMed |
|
|
rs1587717867 CA373546933 |
839 | Y>S | No |
ClinGen Ensembl |
|
|
CA193425347 rs1006221174 |
840 | Q>* | No |
ClinGen Ensembl |
|
|
COSM1226834 rs779118175 CA5077271 |
841 | T>A | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA5077272 rs750993006 |
841 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA193425364 rs750993006 |
841 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs369192162 CA5077282 |
842 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA373546965 rs1253821611 |
843 | V>I | No |
ClinGen TOPMed |
|
|
CA373546972 rs1233993311 |
844 | P>A | No |
ClinGen gnomAD |
|
|
CA373546974 rs1275650544 |
844 | P>L | No |
ClinGen gnomAD |
|
|
CA373546983 rs1194160162 |
846 | I>L | No |
ClinGen gnomAD |
|
|
CA5077285 rs775366059 |
848 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA373547024 rs931647307 |
851 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA373547030 rs1452360647 |
852 | S>F | No |
ClinGen gnomAD |
|
|
rs760440704 CA5077286 |
853 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs1199537290 | 853 | S>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1390407930 CA373547038 |
854 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA373547120 rs946440680 |
863 | N>D | No |
ClinGen gnomAD |
|
|
CA193427378 rs946440680 |
863 | N>H | No |
ClinGen gnomAD |
|
| TCGA novel | 865 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs762133199 CA5077310 |
866 | D>N | No |
ClinGen ExAC |
|
|
CA373547192 rs1271286860 |
867 | E>V | No |
ClinGen gnomAD |
|
|
rs1334236345 CA373547207 COSM1314894 |
868 | I>T | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs565034567 CA5077312 |
870 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1203109562 CA373547308 |
874 | E>D | No |
ClinGen gnomAD |
|
|
CA193427398 rs1043587301 |
877 | S>A | No |
ClinGen Ensembl |
|
|
CA5077314 rs766452902 |
881 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs752054268 CA5077315 |
883 | T>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 883 | T>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 884 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5077319 rs756913631 |
888 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA5077344 rs746462843 |
889 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754524518 CA5077345 |
891 | Q>K | No |
ClinGen ExAC |
|
|
CA5077346 rs781347981 |
891 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA193427859 rs1051043400 |
892 | E>D | No |
ClinGen Ensembl |
|
|
rs769761295 CA5077348 |
892 | E>K | No |
ClinGen ExAC TOPMed |
|
|
CA5077349 rs140830744 |
893 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA373548617 rs1236154542 |
894 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs749502877 CA5077350 |
896 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA5077352 rs774306337 |
897 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA5077353 rs774306337 |
897 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs771116742 CA5077351 |
897 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs201481191 CA5077354 |
898 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5077355 rs776013279 |
901 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs767335393 CA5077358 |
902 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs540527267 CA5077356 |
902 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1168846901 CA373548792 |
905 | E>D | No |
ClinGen TOPMed |
|
|
rs1455874239 CA373548787 |
905 | E>G | No |
ClinGen gnomAD |
|
|
rs1564074734 CA373548841 |
908 | K>N | No |
ClinGen Ensembl |
|
|
CA373548954 rs1266631587 |
915 | D>E | No |
ClinGen TOPMed |
|
|
CA5077361 rs562127615 |
915 | D>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1442830480 CA588218708 |
921 | I>K* | No |
ClinGen gnomAD |
|
| TCGA novel | 922 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777434915 CA5077366 |
923 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA373549178 rs1214863097 |
923 | Q>H | No |
ClinGen gnomAD |
|
|
rs777434915 CA373549160 |
923 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA5077381 rs767165832 |
924 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA5077382 rs752186270 |
927 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs778093200 CA193428181 |
927 | R>T | No |
ClinGen gnomAD |
|
| TCGA novel | 931 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1261960280 CA373549481 |
931 | P>S | No |
ClinGen TOPMed |
|
|
rs1564074969 CA373549522 |
933 | K>E | No |
ClinGen Ensembl |
|
|
rs777822948 CA5077384 |
936 | V>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 939 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5077385 rs753711173 |
944 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA5077387 rs778654653 CA5077389 |
945 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5077386 rs200904880 |
945 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1564075020 CA373549832 |
946 | F>S | No |
ClinGen Ensembl |
|
| TCGA novel | 947 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| rs940304838 | 948 | S>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 949 | S>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA373549908 rs780124157 |
949 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5077390 rs780124157 |
949 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749815955 CA5077392 CA5077391 |
950 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373549925 rs1264955913 |
950 | M>R | No |
ClinGen gnomAD |
|
|
rs777235315 CA5077393 |
951 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1393577458 CA373549963 |
951 | Q>R | No |
ClinGen gnomAD |
|
|
rs1401105641 CA373549975 |
952 | C>R | No |
ClinGen gnomAD |
|
|
CA373549989 rs1319963606 |
952 | C>S | No |
ClinGen gnomAD |
|
|
rs1319963606 CA373549986 |
952 | C>Y | No |
ClinGen gnomAD |
|
|
rs748581730 CA5077394 |
955 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs773670036 CA5077397 COSM216145 |
957 | D>N | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA5077399 rs767221025 |
961 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5077400 rs775268552 |
962 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 963 | E>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1564076209 CA373551434 |
966 | Y>N | No |
ClinGen Ensembl |
|
|
rs1282775906 CA588648244 |
969 | Y>* | No |
ClinGen gnomAD |
|
|
CA373551515 rs1210272769 |
970 | G>A | No |
ClinGen gnomAD |
|
|
CA373551531 rs1439628131 |
971 | I>M | No |
ClinGen gnomAD |
|
|
CA373551535 rs771417726 |
972 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1438880623 CA373551595 |
976 | K>* | No |
ClinGen gnomAD |
|
|
CA373551609 rs1587724763 |
977 | F>V | No |
ClinGen Ensembl |
|
|
COSM285211 CA5077419 rs371533849 |
978 | R>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA373551630 rs1396517655 |
978 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs532203884 CA5077421 |
979 | S>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs761827285 CA193429660 |
980 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761827285 CA5077422 |
980 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750360162 CA5077424 |
982 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA373551731 rs1306009707 |
985 | E>* | No |
ClinGen gnomAD |
|
|
rs1312213472 CA373551766 |
987 | T>I | No |
ClinGen TOPMed |
|
|
rs766140543 CA5077426 |
988 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA373551792 rs1400604232 |
989 | H>Y | No |
ClinGen TOPMed |
|
|
CA5077427 rs751830146 |
990 | H>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1362217315 CA373551885 |
995 | E>A | No |
ClinGen TOPMed |
|
|
CA373551906 rs1564076356 |
996 | R>S | No |
ClinGen Ensembl |
|
| TCGA novel | 998 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781334586 CA5077429 |
1001 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA193429762 rs113873672 |
1003 | Y>C | No |
ClinGen Ensembl |
|
|
rs1194104838 CA373552014 |
1003 | Y>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 1004 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5077431 rs756248517 |
1009 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1194165781 CA373552229 |
1011 | N>S | No |
ClinGen gnomAD |
|
|
CA5077432 rs778490445 |
1015 | F>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749778024 CA5077433 |
1017 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA373552504 rs1423659940 |
1022 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA193429903 rs949776448 |
1025 | M>T | No |
ClinGen TOPMed |
|
|
rs754414457 CA373552643 |
1028 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs760370074 CA193429909 |
1028 | I>N | No |
ClinGen Ensembl |
|
|
rs754414457 CA5077454 |
1028 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA373552658 rs1416268890 |
1030 | E>* | No |
ClinGen gnomAD |
|
|
rs1289390375 CA373552666 |
1031 | R>Q | No |
ClinGen gnomAD |
|
|
CA5077456 rs779337326 |
1031 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746278336 CA5077457 |
1032 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA193429955 rs377000589 |
1033 | V>M | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA5077459 rs780751713 |
1037 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769316608 CA5077461 |
1038 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs747781398 CA5077460 |
1038 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA373552723 COSM1462803 rs1269991282 |
1040 | T>A | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA373552725 rs1489361030 |
1040 | T>S | No |
ClinGen gnomAD |
|
|
rs1332504979 CA373552729 |
1041 | A>S | No |
ClinGen gnomAD |
|
|
rs538844815 CA373552791 |
1049 | Y>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5077466 rs774331529 CA5077465 |
1051 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs767313342 CA5077467 |
1052 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770468980 CA5077484 |
1059 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA5077485 rs774193877 |
1059 | N>S | No |
ClinGen ExAC |
|
|
rs145830194 CA193431015 |
1066 | M>V | No |
ClinGen ESP gnomAD |
|
|
CA373552922 rs1462550347 |
1067 | T>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 1067 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1068 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767740658 CA5077489 |
1070 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA5077490 rs760978904 |
1072 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764352059 CA5077491 |
1073 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1236087851 CA373552970 |
1074 | G>C | No |
ClinGen gnomAD |
|
|
CA5077492 rs776991348 |
1075 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs761842222 CA5077493 |
1076 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1253629809 CA373553020 |
1081 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
rs192311641 CA193431053 |
1084 | N>D | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1455851511 CA373553049 |
1085 | L>F | No |
ClinGen gnomAD |
|
|
rs983733477 CA193431054 |
1087 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA5077497 rs766735961 |
1089 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs758899203 CA5077496 |
1089 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1090 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA193431072 rs370996956 |
1091 | R>Q | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA5077498 rs149006982 |
1091 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs374607515 CA193431080 |
1092 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA gnomAD |
|
rs755324108 CA5077499 |
1092 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1109786 rs1395025215 CA373553091 |
1093 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs201772265 CA5077500 |
1093 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5077501 rs373992254 |
1094 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5077502 rs367938382 |
1094 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs778433144 CA5077503 |
1095 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs370748953 CA5077504 |
1096 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs775436455 CA5077506 |
1099 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746869603 CA5077507 |
1100 | P>L | No |
ClinGen ExAC gnomAD |
No associated diseases with Q8IY18
1 regional properties for Q8IY18
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | RecF/RecN/SMC, N-terminal | 53 - 1053 | IPR003395 |
Functions
12 GO annotations of cellular component
| Name | Definition |
|---|---|
| cell junction | A cellular component that forms a specialized region of connection between two or more cells, or between a cell and the extracellular matrix, or between two membrane-bound components of a cell, such as flagella. |
| chromosome, centromeric region | The region of a chromosome that includes the centromeric DNA and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome. |
| chromosome, telomeric region | The end of a linear chromosome, required for the integrity and maintenance of the end. A chromosome telomere usually includes a region of telomerase-encoded repeats the length of which rarely exceeds 20 bp each and that permits the formation of a telomeric loop (T-loop). The telomeric repeat region is usually preceded by a sub-telomeric region that is gene-poor but rich in repetitive elements. Some telomeres only consist of the latter part (for eg. D. melanogaster telomeres). |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| interchromatin granule | A class of nuclear body measuring 20-25 nm in diameter and distributed throughout the interchromatin space, linked together by thin fibrils. They are believed to be storage centers for various snRNAs, snRNPs, serine/arginine-rich proteins and RNA polymerase II. A typical mammalian cell contains 25-50 clusters of interchromatin granules. Interchromatin granule clusters do not contain the heterogeneous nuclear RNA-binding proteins (hnRNPs). |
| nuclear speck | A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| PML body | A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection. |
| sex chromosome | A chromosome involved in sex determination. |
| site of double-strand break | A region of a chromosome at which a DNA double-strand break has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix. |
| Smc5-Smc6 complex | A conserved complex that contains a heterodimer of SMC proteins (Smc5p and Smc6p, or homologs thereof) and several other proteins, and is involved in DNA repair and maintaining cell cycle arrest following DNA damage. In S. cerevisiae, this is an octameric complex called Mms21-Smc5-Smc6 complex, with at least five of its subunits conserved in fission yeast and humans. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| ATP hydrolysis activity | Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient. |
| single-stranded DNA binding | Binding to single-stranded DNA. |
15 GO annotations of biological process
| Name | Definition |
|---|---|
| cell division | The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells. |
| cellular response to DNA damage stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism. |
| cellular senescence | A cell aging process stimulated in response to cellular stress, whereby normal cells lose the ability to divide through irreversible cell cycle arrest. |
| chromosome condensation | The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells. |
| chromosome segregation | The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets. In eukaryotes, chromosome segregation begins with the condensation of chromosomes, includes chromosome separation, and ends when chromosomes have completed movement to the spindle poles. |
| double-strand break repair via homologous recombination | The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule. |
| internal peptidyl-lysine acetylation | The addition of an acetyl group to a non-terminal lysine residue in a protein. |
| mitotic cell cycle phase transition | The cell cycle process by which a cell commits to entering the next mitotic cell cycle phase. |
| positive regulation of chromosome segregation | Any process that activates or increases the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets. |
| positive regulation of maintenance of mitotic sister chromatid cohesion | Any process that increases the extent to which the association between sister chromatids of a replicated chromosome is maintained during a mitotic cell cycle. |
| protein localization to chromosome, centromeric region | Any process in which a protein is transported to, or maintained at, the centromeric region of a chromosome. |
| protein sumoylation | The process in which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxy-terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein. |
| regulation of telomere maintenance | Any process that modulates the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA. |
| stem cell population maintenance | The process by which an organism or tissue maintains a population of stem cells of a single type. This can be achieved by a number of mechanisms: stem cell asymmetric division maintains stem cell numbers; stem cell symmetric division increases them; maintenance of a stem cell niche maintains the conditions for commitment to the stem cell fate for some types of stem cell; stem cells may arise de novo from other cell types. |
| telomere maintenance via recombination | Any recombinational process that contributes to the maintenance of proper telomeric length. |
2 homologous proteins in AiPD
| 10 | 20 | 30 | 40 | 50 | 60 |
| MATPSKKTST | PSPQPSKRAL | PRDPSSEVPS | KRKNSAPQLP | LLQSSGPFVE | GSIVRISMEN |
| 70 | 80 | 90 | 100 | 110 | 120 |
| FLTYDICEVS | PGPHLNMIVG | ANGTGKSSIV | CAICLGLAGK | PAFMGRADKV | GFFVKRGCSR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| GMVEIELFRA | SGNLVITREI | DVAKNQSFWF | INKKSTTQKI | VEEKVAALNI | QVGNLCQFLP |
| 190 | 200 | 210 | 220 | 230 | 240 |
| QDKVGEFAKL | SKIELLEATE | KSIGPPEMHK | YHCELKNLRE | KEKQLETSCK | EKTEYLQKMV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| QRNERYKQDV | ERFYERKRHL | DLIEMLEAKR | PWVEYENVRQ | EYEEVKLVRD | RVKEEVRKLK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| EGQIPVTCRI | EEMENERHNL | EARIKEKATD | IKEASQKCKQ | KQDVIERKDK | HIEELQQALI |
| 370 | 380 | 390 | 400 | 410 | 420 |
| VKQNEELDRQ | RRIGNTRKMI | EDLQNELKTT | ENCENLQPQI | DAITNDLRRI | QDEKALCEGE |
| 430 | 440 | 450 | 460 | 470 | 480 |
| IIDKRRERET | LEKEKKSVDD | HIVRFDNLMN | QKEDKLRQRF | RDTYDAVLWL | RNNRDKFKQR |
| 490 | 500 | 510 | 520 | 530 | 540 |
| VCEPIMLTIN | MKDNKNAKYI | ENHIPSNDLR | AFVFESQEDM | EVFLKEVRDN | KKLRVNAVIA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| PKSSYADKAP | SRSLNELKQY | GFFSYLRELF | DAPDPVMSYL | CCQYHIHEVP | VGTEKTRERI |
| 610 | 620 | 630 | 640 | 650 | 660 |
| ERVIQETRLK | QIYTAEEKYV | VKTSFYSNKV | ISSNTSLKVA | QFLTVTVDLE | QRRHLEEQLK |
| 670 | 680 | 690 | 700 | 710 | 720 |
| EIHRKLQAVD | SGLIALRETS | KHLEHKDNEL | RQKKKELLER | KTKKRQLEQK | ISSKLGSLKL |
| 730 | 740 | 750 | 760 | 770 | 780 |
| MEQDTCNLEE | EERKASTKIK | EINVQKAKLV | TELTNLIKIC | TSLHIQKVDL | ILQNTTVISE |
| 790 | 800 | 810 | 820 | 830 | 840 |
| KNKLESDYMA | ASSQLRLTEQ | HFIELDENRQ | RLLQKCKELM | KRARQVCNLG | AEQTLPQEYQ |
| 850 | 860 | 870 | 880 | 890 | 900 |
| TQVPTIPNGH | NSSLPMVFQD | LPNTLDEIDA | LLTEERSRAS | CFTGLNPTIV | QEYTKREEEI |
| 910 | 920 | 930 | 940 | 950 | 960 |
| EQLTEELKGK | KVELDQYREN | ISQVKERWLN | PLKELVEKIN | EKFSNFFSSM | QCAGEVDLHT |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| ENEEDYDKYG | IRIRVKFRSS | TQLHELTPHH | QSGGERSVST | MLYLMALQEL | NRCPFRVVDE |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| INQGMDPINE | RRVFEMVVNT | ACKENTSQYF | FITPKLLQNL | PYSEKMTVLF | VYNGPHMLEP |
| 1090 | 1100 | ||||
| NTWNLKAFQR | RRRRITFTQP | S |