Q7Z6J4
Gene name |
FGD2 (ZFYVE4) |
Protein name |
FYVE, RhoGEF and PH domain-containing protein 2 |
Names |
Zinc finger FYVE domain-containing protein 4 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:221472 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q7Z6J4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q7Z6J4-F1 | Predicted | AlphaFoldDB |
588 variants for Q7Z6J4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs907490276 CA137462271 |
3 | G>R | No |
ClinGen TOPMed |
|
|
rs541913806 CA3782701 |
4 | A>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA137462275 rs909931830 |
4 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA137462273 rs909931830 |
4 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3782702 rs749414070 |
6 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA137462281 rs1045118771 |
13 | S>A | No |
ClinGen Ensembl |
|
|
rs748633270 CA3782705 |
14 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3782706 rs761462484 |
15 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363852830 rs1561922730 |
17 | T>P | No |
ClinGen Ensembl |
|
|
CA3782710 rs776108370 |
20 | E>D | No |
ClinGen ExAC |
|
|
rs1216672111 CA363852880 |
20 | E>Q | No |
ClinGen gnomAD |
|
|
rs766060049 CA3782709 |
20 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs759109126 CA3782711 |
22 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA137463110 rs867596063 |
24 | T>I | No |
ClinGen Ensembl |
|
|
CA3782731 rs774972187 |
25 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762395833 CA3782732 |
28 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs868321410 CA137463116 |
30 | R>* | No |
ClinGen Ensembl |
|
|
rs764046611 CA3782733 |
31 | G>A | No |
ClinGen ExAC |
|
|
rs831510 VAR_021491 CA3782735 |
32 | Q>H | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA363853396 rs1443349102 |
35 | E>K | No |
ClinGen gnomAD |
|
|
CA3782737 rs754153972 |
35 | E>V | No |
ClinGen ExAC gnomAD |
|
|
RCV000961713 CA3782739 rs34617818 CA3782738 |
36 | D>E | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA3782741 rs752828413 |
37 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3782740 rs752828413 |
37 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3782742 rs73730511 |
38 | H>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs73730511 CA3782743 RCV000966997 |
38 | H>R | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA3782744 rs771370154 |
39 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1276019497 CA363853423 |
39 | H>R | No |
ClinGen TOPMed |
|
|
COSM1252384 rs745594755 CA3782746 |
40 | R>C | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs138995094 CA3782748 |
40 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3782747 rs138995094 |
40 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1234585956 CA363853448 |
43 | C>* | No |
ClinGen gnomAD |
|
|
rs565025526 CA3782749 |
43 | C>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3782750 rs768128636 |
44 | R>W | No |
ClinGen ExAC gnomAD |
|
|
COSM451372 CA3782754 rs750198030 |
47 | E>K | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA363853497 rs1418324778 |
51 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs142160745 CA3782756 |
52 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs369212622 CA363853499 |
52 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3782757 rs369212622 |
52 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs142160745 COSM1078592 CA3782755 |
52 | R>W | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA363853503 rs763351869 |
53 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
CA363853501 rs763351869 |
53 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA363853513 rs1452569631 |
54 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 55 | T>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs146354673 CA3782758 |
55 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3782761 rs757695362 |
57 | V>D | No |
ClinGen ExAC gnomAD |
|
|
CA363853531 rs138397340 |
57 | V>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3782760 rs138397340 |
57 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA137463158 rs778842453 |
58 | G>A | No |
ClinGen TOPMed |
|
|
CA3782764 rs151265686 |
58 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs569865241 CA3782766 |
61 | V>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs114619383 CA3782765 RCV000946941 |
61 | V>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1037717034 CA137463167 |
62 | G>E | No |
ClinGen TOPMed |
|
|
CA363853562 rs1583291038 |
63 | S>A | No |
ClinGen Ensembl |
|
|
CA3782768 rs773719328 |
66 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA363853588 rs1427669214 |
67 | T>A | No |
ClinGen gnomAD |
|
|
rs747634602 CA3782769 |
67 | T>K | No |
ClinGen ExAC gnomAD |
|
|
CA3782771 rs140572234 |
69 | S>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3782770 rs140572234 |
69 | S>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA363853628 rs1317717127 |
72 | Y>D | No |
ClinGen gnomAD |
|
|
rs1317717127 CA363853627 |
72 | Y>H | No |
ClinGen gnomAD |
|
|
rs572645440 CA3782774 |
75 | S>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs572645440 CA363853706 |
75 | S>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs190281300 CA3782775 |
77 | K>Q | No |
ClinGen 1000Genomes ExAC |
|
|
rs764295457 CA3782776 |
78 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA363853765 rs1222652871 |
79 | K>Q | No |
ClinGen gnomAD |
|
|
CA363853789 rs1445786441 |
80 | L>R | No |
ClinGen TOPMed |
|
|
CA3782778 rs373540712 |
82 | S>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs750902984 CA3782780 |
83 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs756507480 CA3782781 |
84 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA363853846 rs1174630134 |
85 | W>S | No |
ClinGen TOPMed |
|
|
CA3782782 rs202027789 |
86 | R>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1184097719 CA363853958 |
91 | P>S | No |
ClinGen TOPMed |
|
|
CA3782784 rs754636366 |
93 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA3782785 rs778559752 |
94 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA3782786 rs747641806 |
97 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs746920455 CA3782789 |
99 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1385790419 CA363854073 |
99 | T>S | No |
ClinGen gnomAD |
|
|
rs1365176497 CA363854096 |
100 | Q>R | No |
ClinGen gnomAD |
|
|
rs765613237 CA3782819 |
101 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1346347817 CA363854557 |
102 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
| TCGA novel | 103 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA363854596 rs1167098675 |
104 | K>E | No |
ClinGen gnomAD |
|
|
rs147833566 CA3782820 |
104 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA137463723 rs367720858 |
106 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs777498400 CA3782822 |
107 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363854731 rs1452689400 |
110 | L>V | No |
ClinGen gnomAD |
|
|
CA363854821 rs1561927144 |
115 | Q>L | No |
ClinGen Ensembl |
|
|
rs1199425221 CA363854831 |
116 | A>T | No |
ClinGen TOPMed |
|
|
rs371671447 CA363854893 |
119 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1252270472 CA363854886 |
119 | A>T | No |
ClinGen gnomAD |
|
|
CA3782826 rs371671447 COSM451373 |
119 | A>V | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs779897171 CA3782828 |
120 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs752975152 CA3782829 |
120 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363854926 rs1259990951 |
121 | L>H | No |
ClinGen gnomAD |
|
|
rs1259990951 CA363854928 |
121 | L>P | No |
ClinGen gnomAD |
|
|
CA3782830 rs772297282 |
122 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs760776321 CA3782832 |
124 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1034623002 CA137463747 |
125 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1466953763 CA363855000 |
126 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1466953763 CA363855005 |
126 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
CA3782871 rs769719224 |
127 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA3782872 rs776101650 |
128 | F>V | No |
ClinGen ExAC gnomAD |
|
|
CA363855198 rs1583296458 |
131 | E>Q | No |
ClinGen Ensembl |
|
|
rs1315517186 CA363855241 |
133 | L>Q | No |
ClinGen TOPMed |
|
|
CA363855246 rs1315517186 |
133 | L>R | No |
ClinGen TOPMed |
|
|
rs774863742 CA3782875 |
136 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA3782877 rs371219616 |
137 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772703341 COSM294373 CA3782878 |
137 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs772703341 CA363855308 |
137 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371219616 CA3782876 |
137 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3782880 rs765785664 |
139 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1207019 CA363855344 rs1561927992 |
139 | S>N | large_intestine [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs753872580 CA3782881 |
140 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs754904015 CA3782882 |
143 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1381616908 CA363855421 |
144 | E>K | No |
ClinGen gnomAD |
|
|
CA363855443 rs1306651900 |
145 | D>E | No |
ClinGen gnomAD |
|
|
CA3782884 rs752500567 |
145 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs200637703 CA3782885 |
145 | D>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs752500567 CA363855430 |
145 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3782887 rs750575851 |
147 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3782886 rs781506068 |
147 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA137463980 rs866211898 |
148 | R>K | No |
ClinGen Ensembl |
|
|
CA3782889 rs779997550 |
148 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA3782890 rs749318658 |
152 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3782891 rs769302104 |
154 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs1427817192 CA363855594 |
154 | I>V | No |
ClinGen TOPMed |
|
|
CA3782892 rs779517528 |
155 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1419289762 CA363855620 |
156 | S>C | No |
ClinGen gnomAD |
|
|
rs1446080212 CA363855623 |
157 | I>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1446080212 CA363855624 |
157 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA3782894 rs772295712 |
158 | Y>C | No |
ClinGen ExAC |
|
|
rs772967215 CA3782896 |
159 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs770540521 CA3782897 |
160 | F>I | No |
ClinGen ExAC gnomAD |
|
|
rs1469418019 CA363855646 |
160 | F>S | No |
ClinGen gnomAD |
|
|
CA3782899 rs758987675 |
161 | H>N | No |
ClinGen ExAC gnomAD |
|
|
rs901013366 CA363855669 |
163 | Q>H | No |
ClinGen gnomAD |
|
|
rs199827786 CA137464009 |
163 | Q>L | No |
ClinGen 1000Genomes |
|
|
CA3782900 rs765180579 |
169 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA3782902 rs142895649 |
171 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs752588458 CA3782901 |
171 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763769959 CA3782903 COSM3430587 |
172 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs750711356 COSM186839 CA3782904 |
172 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs780269753 CA3782906 |
175 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363856331 rs1324194188 |
179 | N>S | No |
ClinGen gnomAD |
|
|
rs755462020 CA3782926 |
180 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA3782927 rs755462020 |
180 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA3782928 rs151050710 |
181 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs75714191 CA3782929 |
181 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 181 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA363856378 rs140941536 |
182 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs747353597 CA3782931 |
183 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757600051 CA3782933 |
184 | D>N | No |
ClinGen ExAC |
|
|
CA3782936 rs769347475 |
185 | V>A | No |
ClinGen ExAC |
|
|
rs745495278 CA3782935 |
185 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774972648 CA3782937 |
189 | L>M | No |
ClinGen ExAC gnomAD |
|
|
rs1372230196 CA363856455 |
190 | A>V | No |
ClinGen TOPMed |
|
|
CA137469555 rs756511136 |
194 | K>N | No |
ClinGen Ensembl |
|
|
rs761556224 CA3782941 |
196 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1349313769 CA363856507 |
198 | E>* | No |
ClinGen TOPMed |
|
|
CA3782943 rs777052919 |
200 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA363856548 rs1171224213 |
202 | N>T | No |
ClinGen TOPMed |
|
|
rs759833280 CA3782944 |
203 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765489413 CA3782945 |
204 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3782946 rs376313840 |
205 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs758454934 CA363856583 |
205 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3782947 rs758454934 |
205 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3782950 rs757664055 |
207 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA3782951 rs781520968 |
209 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363856643 rs1339506336 |
211 | A>V | No |
ClinGen gnomAD |
|
|
rs373155633 CA137469597 |
215 | D>E | No |
ClinGen Ensembl |
|
|
rs370600369 CA3782954 |
215 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA137469594 rs370600369 |
215 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1305308414 CA363856719 |
219 | L>P | No |
ClinGen TOPMed |
|
|
CA137469621 rs902572700 |
220 | F>L | No |
ClinGen Ensembl |
|
|
rs903970284 CA137469618 |
220 | F>V | No |
ClinGen TOPMed |
|
|
CA137469626 rs374009275 |
221 | Q>* | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs774205833 CA3782957 |
222 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768184742 CA3782956 |
222 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1232651115 CA363856768 |
223 | V>F | No |
ClinGen TOPMed |
|
|
rs1424625962 CA363856779 |
224 | L>F | No |
ClinGen gnomAD |
|
|
rs748104706 CA3782958 |
226 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748104706 CA3782959 |
226 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs367888863 CA3782960 COSM186845 |
226 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3782962 rs140731698 |
227 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA363856832 rs1466795252 |
228 | Q>H | No |
ClinGen gnomAD |
|
|
rs199957582 CA363856828 |
228 | Q>P | No |
ClinGen 1000Genomes gnomAD |
|
|
CA137469656 rs199957582 |
228 | Q>R | No |
ClinGen 1000Genomes gnomAD |
|
|
CA137469825 rs999397386 |
229 | S>G | No |
ClinGen TOPMed |
|
|
CA3782986 rs761835247 |
230 | S>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 231 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs145883518 CA3782988 |
231 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs372311354 CA3782990 |
233 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA363856961 rs1433333415 |
234 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs754666163 CA3782992 |
234 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA137469853 rs201108665 |
237 | T>A | No |
ClinGen 1000Genomes |
|
|
rs778373251 CA3782993 |
237 | T>N | No |
ClinGen ExAC |
|
|
rs1361495201 CA363857017 |
239 | Q>P | No |
ClinGen gnomAD |
|
|
rs1418734698 CA363857027 |
240 | H>Y | No |
ClinGen gnomAD |
|
|
rs143497870 CA137469861 |
241 | H>P | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs867353455 CA137469863 |
242 | M>V | No |
ClinGen Ensembl |
|
|
CA363857075 rs1403464161 |
243 | L>V | No |
ClinGen gnomAD |
|
|
rs777897004 CA3782996 |
246 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1388968268 CA363857135 |
247 | Q>* | No |
ClinGen gnomAD |
|
|
CA3782997 rs144341931 |
250 | P>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs760324468 CA137469884 |
251 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs763695122 CA3782998 |
251 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs201200599 CA3783000 |
253 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768933065 CA3783002 |
256 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA3783003 rs542454301 |
257 | K>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3783005 rs184929659 |
258 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1188644578 CA363857349 |
258 | E>K | No |
ClinGen TOPMed |
|
|
CA3783004 rs748270405 |
258 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs1438503758 CA363857389 |
260 | I>L | No |
ClinGen gnomAD |
|
|
rs1438503758 CA363857391 |
260 | I>V | No |
ClinGen gnomAD |
|
|
CA3783006 rs773769622 |
261 | Q>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 262 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3783007 rs200159183 |
262 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3783008 rs766728677 |
265 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs777069436 CA3783011 |
266 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
rs1379696554 CA363857527 |
269 | D>H | No |
ClinGen Ensembl |
|
|
rs202181515 CA137469953 |
270 | Q>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs202181515 CA3783013 |
270 | Q>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1296917307 CA363857547 |
270 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
CA3783016 rs763683329 |
272 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA3783017 rs764649862 |
274 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3783039 rs199640627 |
279 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3783038 rs750308518 |
279 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs767534132 CA3783037 |
279 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA363857854 rs1344690623 |
280 | I>F | No |
ClinGen TOPMed |
|
|
rs1484477059 CA363857917 |
282 | S>L | No |
ClinGen gnomAD |
|
|
rs1372343439 CA363858003 |
286 | H>P | No |
ClinGen TOPMed |
|
|
rs1372343439 CA363858005 |
286 | H>R | No |
ClinGen TOPMed |
|
|
CA3783042 rs758634015 |
288 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs777924662 CA363858052 |
288 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3783043 rs777924662 |
288 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747146242 CA3783044 |
289 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA3783045 rs770883477 |
290 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA363858117 rs1361105934 |
291 | I>V | No |
ClinGen gnomAD |
|
|
CA3783046 rs147148066 |
293 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1398315477 CA363858161 |
293 | E>Q | No |
ClinGen gnomAD |
|
|
rs554359469 CA137470310 |
294 | M>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3783047 rs554359469 |
294 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363858177 rs1339545796 |
294 | M>V | No |
ClinGen gnomAD |
|
|
rs201398945 CA363858274 |
296 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3783072 rs201398945 |
296 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1288079879 CA363858272 |
296 | R>W | No |
ClinGen gnomAD |
|
|
rs556232556 CA3783075 |
299 | D>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs772611764 CA3783074 |
299 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs753745690 CA363858361 |
302 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759374023 CA3783078 |
303 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA363858363 rs1396194134 |
303 | V>M | No |
ClinGen gnomAD |
|
|
rs1388248499 CA363858376 |
304 | Y>H | No |
ClinGen gnomAD |
|
|
rs1362721531 CA363858395 |
305 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
rs79274660 CA3783080 |
305 | Q>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs377492771 CA3783081 |
306 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs377492771 CA3783083 |
306 | R>G | No |
ClinGen ESP ExAC gnomAD |
|
|
CA3783084 rs756219700 |
306 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs377492771 CA3783082 |
306 | R>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA363858420 rs1377186029 |
307 | L>P | No |
ClinGen gnomAD |
|
|
CA363858422 rs1377186029 |
307 | L>R | No |
ClinGen gnomAD |
|
|
CA3783085 rs780743333 |
308 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs140282952 CA3783087 |
311 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374743887 CA3783089 |
312 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs771645939 CA3783090 |
313 | I>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 313 | I>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1198086759 CA363858508 |
313 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs772882424 CA3783091 |
314 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA137470631 rs950617115 |
315 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA363858526 rs746564018 |
315 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA3783092 rs746564018 |
315 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs142937832 CA3783094 |
316 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs770404500 CA3783093 |
316 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1419929674 CA363858590 |
319 | T>I | No |
ClinGen gnomAD |
|
|
rs571990509 CA137470644 |
322 | R>C | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs183698723 CA3783098 |
322 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs183698723 CA363858629 |
322 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs183698723 CA137470652 |
322 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA363858638 rs1214149381 |
323 | E>G | No |
ClinGen Ensembl |
|
|
rs750625732 CA3783100 |
324 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs766565997 CA3783102 |
325 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs766565997 CA3783103 |
325 | P>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 326 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1448025565 CA363859295 |
329 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs758759895 CA3783107 |
330 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA363859313 rs1258829859 |
332 | R>C | No |
ClinGen gnomAD |
|
|
rs777342221 CA3783108 |
332 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA363859311 rs1258829859 |
332 | R>S | No |
ClinGen gnomAD |
|
|
CA3783109 COSM239864 rs746649633 |
333 | R>C | Variant assessed as Somatic; 0.0 impact. prostate breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs147265209 CA3783110 |
333 | R>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3783112 rs745324102 COSM1078609 |
335 | D>N | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 335 | D>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA363859335 rs1583304276 |
336 | P>T | No |
ClinGen Ensembl |
|
|
CA363859347 rs1169826625 |
337 | M>I | No |
ClinGen gnomAD |
|
|
CA3783113 rs769637078 |
339 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs775453947 CA3783114 |
339 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs775453947 CA363859360 |
339 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA137470726 rs371611799 |
341 | L>V | No |
ClinGen ESP TOPMed |
|
|
CA137470754 rs563795781 |
342 | F>S | No |
ClinGen 1000Genomes |
|
|
CA3783117 rs773638996 |
343 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763519054 CA3783142 |
347 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1159638123 CA363859427 |
347 | M>K | No |
ClinGen gnomAD |
|
|
CA3783143 rs190242790 |
348 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1293427762 CA363859436 |
349 | L>I | No |
ClinGen gnomAD |
|
|
CA363859451 rs1443185180 |
351 | C>R | No |
ClinGen gnomAD |
|
|
rs1443185180 CA363859450 |
351 | C>S | No |
ClinGen gnomAD |
|
|
rs1307436754 CA363859466 |
353 | P>T | No |
ClinGen gnomAD |
|
|
rs139149403 CA3783145 |
358 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA363859503 rs1307471972 |
359 | G>S | No |
ClinGen gnomAD |
|
| TCGA novel | 360 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3783146 rs373556084 |
360 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1468585508 CA363859516 |
361 | Q>* | No |
ClinGen gnomAD |
|
|
CA363859517 rs1281408270 |
361 | Q>P | No |
ClinGen TOPMed |
|
|
CA363859549 rs1177382519 |
365 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1410668000 CA363859557 |
367 | R>C | No |
ClinGen gnomAD |
|
|
rs1422414787 CA363859562 |
367 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1422414787 CA363859561 |
367 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA363859575 rs1448547534 |
369 | D>E | No |
ClinGen TOPMed |
|
|
COSM3830377 rs779622760 CA3783149 |
369 | D>N | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA363859582 rs1349047025 |
370 | V>G | No |
ClinGen gnomAD |
|
|
rs1300092525 CA363859591 |
372 | G>E | No |
ClinGen gnomAD |
|
|
CA3783151 rs768665091 |
372 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778958713 CA3783152 |
373 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363859596 rs1226395888 |
373 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA363859595 rs1226395888 |
373 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA3783166 rs765902273 |
375 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA363860393 rs368683361 |
375 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368683361 CA3783165 |
375 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs754510582 CA3783168 |
376 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3783167 rs753419995 |
376 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1344542441 CA363860417 |
379 | M>T | No |
ClinGen gnomAD |
|
|
rs1285432556 CA363860433 |
381 | A>D | No |
ClinGen gnomAD |
|
| TCGA novel | 382 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779046545 CA3783170 |
384 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1218322093 CA363860461 |
385 | H>R | No |
ClinGen gnomAD |
|
|
CA363860459 rs1364829419 |
385 | H>Y | No |
ClinGen gnomAD |
|
|
CA137474313 rs375261795 |
386 | S>C | No |
ClinGen ESP gnomAD |
|
|
CA3783172 rs145257454 |
387 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA363860473 rs1368704183 |
387 | F>Y | No |
ClinGen TOPMed |
|
|
rs777712865 CA3783173 |
389 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs770074264 CA3783176 |
391 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363860494 rs770074264 |
391 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775530130 CA3783177 |
392 | K>M | No |
ClinGen ExAC |
|
|
rs1040255077 CA137474374 |
394 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs749426264 CA3783178 |
394 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs982226660 CA137474402 |
395 | T>A | No |
ClinGen gnomAD |
|
|
CA3783179 rs768699381 |
399 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA137474415 rs1030629765 |
399 | Q>R | No |
ClinGen Ensembl |
|
|
CA3783180 rs774894854 |
400 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3783181 rs762301573 |
401 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767956722 CA3783182 |
401 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762301573 CA363860551 |
401 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 404 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 406 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1395982670 CA363860604 |
406 | M>I | No |
ClinGen gnomAD |
|
|
CA363860610 rs1166915196 |
407 | I>T | No |
ClinGen gnomAD |
|
|
CA363860625 rs1327736110 |
409 | W>* | No |
ClinGen gnomAD |
|
|
rs746847649 CA3783193 |
411 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA3783194 rs756970544 |
411 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs779069376 CA3783218 |
412 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA363860656 rs755217529 |
412 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA3783217 rs755217529 |
412 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA363860672 rs1228291554 |
414 | Q>R | No |
ClinGen TOPMed |
|
|
CA363860676 rs1170413078 |
415 | A>T | No |
ClinGen gnomAD |
|
|
rs748268501 CA3783219 |
416 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA3783220 rs772023794 |
417 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1035614176 CA137475675 |
417 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA3783221 rs143671027 |
418 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA363860696 rs1359198596 |
418 | D>G | No |
ClinGen gnomAD |
|
|
rs1561939314 CA363860699 |
419 | Q>* | No |
ClinGen Ensembl |
|
|
CA3783222 rs747470018 |
421 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA363860723 rs1358717644 |
422 | K>* | No |
ClinGen TOPMed |
|
|
CA137475766 rs1043518925 |
422 | K>T | No |
ClinGen gnomAD |
|
|
CA363860730 rs1302935876 |
423 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1302935876 CA363860729 |
423 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA3783223 rs753112675 |
423 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA137475790 rs368966699 |
426 | T>I | No |
ClinGen ESP TOPMed |
|
|
CA363860778 rs374091470 |
430 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA363860775 rs1386159641 |
430 | A>T | No |
ClinGen TOPMed |
|
|
rs374091470 CA3783224 |
430 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs747227398 CA137475842 |
432 | Q>* | No |
ClinGen gnomAD |
|
|
rs1561939378 CA363860797 |
433 | G>E | No |
ClinGen Ensembl |
|
|
CA3783226 rs769598548 |
433 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1261868379 CA363860812 |
436 | G>R | No |
ClinGen gnomAD |
|
|
CA363860817 rs1429756112 |
436 | G>V | No |
ClinGen gnomAD |
|
|
rs1196381025 CA363860828 |
438 | I>F | No |
ClinGen gnomAD |
|
|
CA363860845 rs1394101139 |
440 | E>G | No |
ClinGen gnomAD |
|
|
rs375715265 CA137475860 |
441 | Q>* | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs375715265 CA363860850 |
441 | Q>E | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs78182287 CA3783252 CA3783253 RCV000948733 |
447 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD ClinVar dbSNP |
|
|
rs1187825701 CA363860903 |
447 | E>K | No |
ClinGen gnomAD |
|
|
rs964505006 CA137476368 |
450 | L>H | No |
ClinGen Ensembl |
|
|
rs751618373 CA3783256 |
451 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs764326106 CA3783255 |
451 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA363860928 rs1298559092 |
452 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3783258 rs781775800 |
453 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756612292 CA3783260 |
454 | Q>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs756612292 CA363860943 |
454 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs867111384 CA137476445 |
457 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs780569281 CA3783261 |
457 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3783263 rs768226157 |
463 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA363861013 rs774025462 |
464 | C>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774025462 CA3783264 |
464 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs879141285 CA137476476 |
465 | M>T | No |
ClinGen Ensembl |
|
|
CA3783266 rs569019697 |
466 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs575499635 CA3783268 |
466 | R>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3783267 rs569019697 |
466 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1583320077 CA363861055 |
470 | P>R | No |
ClinGen Ensembl |
|
|
rs766249153 CA3783269 |
471 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363861073 rs1433961646 |
473 | A>T | No |
ClinGen TOPMed |
|
|
CA363861077 rs1286354382 |
473 | A>V | No |
ClinGen gnomAD |
|
|
rs759332299 CA3783271 |
475 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363861089 COSM1078617 rs1172770308 |
476 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs751779194 CA3783273 |
476 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs757335325 CA3783274 |
477 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs562898528 CA3783275 |
477 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3783276 rs377585981 |
478 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs145920571 CA3783277 COSM1207020 |
478 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1583320175 CA363861104 |
479 | H>P | No |
ClinGen Ensembl |
|
|
CA137476573 rs1047380124 |
482 | R>P | No |
ClinGen gnomAD |
|
|
rs1047380124 CA363861126 |
482 | R>Q | No |
ClinGen gnomAD |
|
|
CA3783278 rs780657307 |
482 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs749655959 CA3783279 |
484 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs909173093 CA137476583 |
485 | G>S | No |
ClinGen gnomAD |
|
|
rs767022309 CA3783281 |
486 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1401164812 CA363861169 |
488 | V>M | No |
ClinGen gnomAD |
|
|
rs75108162 CA363861210 |
494 | D>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs75108162 CA3783307 |
494 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA363861225 rs745809338 |
496 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769551030 CA3783309 |
496 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs745809338 CA363861226 |
496 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762784794 COSM596474 CA3783311 |
498 | E>K | lung Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1404013627 CA363861243 |
499 | L>V | No |
ClinGen TOPMed |
|
|
CA3783314 rs151103262 COSM239865 |
502 | D>N | prostate [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs150236008 CA3783316 |
503 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs760106286 CA3783317 |
504 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA3783318 rs765617865 |
505 | R>K | No |
ClinGen ExAC gnomAD |
|
|
COSM342543 CA3783319 rs753093651 |
507 | N>S | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1470491185 CA363861304 |
508 | R>* | No |
ClinGen gnomAD |
|
|
CA3783320 rs137992835 |
508 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs777447846 CA3783321 |
509 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1164920540 CA363861338 |
513 | C>S | No |
ClinGen gnomAD |
|
|
rs751195612 CA3783322 |
514 | Y>C | No |
ClinGen ExAC |
|
|
rs1336695000 CA363861351 |
515 | A>E | No |
ClinGen gnomAD |
|
|
CA3783324 rs780756676 |
515 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA137479539 rs970366293 |
516 | F>L | No |
ClinGen TOPMed |
|
|
rs1561942853 CA363861366 |
517 | L>R | No |
ClinGen Ensembl |
|
|
rs769790531 CA363861368 |
518 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA3783326 rs769790531 |
518 | T>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 519 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3783328 rs373975046 |
522 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1346996300 CA363861398 |
523 | P>S | No |
ClinGen TOPMed |
|
|
rs773635309 CA3783330 |
524 | E>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 525 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA363861428 rs1207286167 |
527 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA3783331 rs747239480 |
527 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA3783332 rs771004067 |
530 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs765815919 CA3783335 |
531 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs759496445 CA3783334 |
531 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1474245231 CA363861456 |
532 | G>R | No |
ClinGen gnomAD |
|
|
CA3783336 rs775950185 |
533 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1397732595 CA363861469 |
534 | L>P | No |
ClinGen gnomAD |
|
|
CA3783369 rs781530786 |
536 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs746069675 CA3783371 |
537 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746069675 CA3783370 |
537 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs145864024 CA137480878 |
541 | T>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3783373 rs145864024 |
541 | T>M | Variant assessed as Somatic; 0.0001854 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1252821546 CA363861521 |
541 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
rs762286725 CA3783377 |
543 | D>H | Variant assessed as Somatic; 4.628e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3783376 rs762286725 |
543 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773558698 COSM1754775 CA363861541 |
544 | Q>H | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA137480894 rs921587843 |
544 | Q>R | No |
ClinGen TOPMed |
|
|
CA363861551 rs1390885239 |
546 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
rs760260697 CA3783379 |
546 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA137480912 rs1054143687 |
548 | C>Y | No |
ClinGen TOPMed |
|
|
rs753432865 CA363861592 |
552 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3783381 rs753432865 |
552 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363861606 rs1238193758 |
554 | I>V | No |
ClinGen gnomAD |
|
|
CA3783383 rs765318959 |
555 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200369147 CA3783384 |
556 | D>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3783385 rs147433704 |
560 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3783386 rs148473105 |
561 | S>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs751308417 CA3783387 |
561 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1248808868 CA363861660 |
562 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1183503295 CA363861669 |
563 | P>H | No |
ClinGen gnomAD |
|
| TCGA novel | 564 | R>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM84973 CA3783391 rs768699458 |
564 | R>Q | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs373769650 CA3783390 |
564 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs748608255 CA3783393 |
565 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363861691 rs1583330430 |
567 | C>G | No |
ClinGen Ensembl |
|
|
CA3783395 rs773472376 |
569 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs1278496562 CA363861706 |
569 | I>T | No |
ClinGen TOPMed |
|
|
rs770749684 CA3783397 |
570 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761063246 CA3783396 |
570 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
COSM1444129 rs759179299 CA3783399 |
571 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs367648819 CA3783398 |
571 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3783401 rs764832577 |
573 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs762809243 CA3783403 |
575 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363861742 rs751341493 |
576 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751341493 CA3783405 |
576 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1254600401 CA363861749 |
577 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA137481090 rs895130872 |
577 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA363861756 rs200327931 |
578 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200327931 CA3783406 |
578 | Y>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3783407 rs766636134 |
579 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs755127721 CA3783409 |
580 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs778873675 CA3783410 |
582 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1308340528 CA363861787 |
583 | P>L | No |
ClinGen gnomAD |
|
|
CA363861791 rs1449995678 |
584 | Q>L | No |
ClinGen gnomAD |
|
|
rs752953818 CA3783451 |
586 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1478991279 CA363861828 |
587 | R>M | No |
ClinGen gnomAD |
|
|
CA3783452 rs763014049 |
589 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764242468 CA3783453 |
590 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA363861844 rs1583331571 |
590 | T>P | No |
ClinGen Ensembl |
|
|
rs1283630002 CA363861850 |
591 | S>P | No |
ClinGen TOPMed |
|
|
rs781749586 CA3783456 |
594 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs527688280 CA137481714 |
599 | V>G | No |
ClinGen Ensembl |
|
|
CA3783460 rs748965234 |
599 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs748965234 CA3783461 |
599 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1340930130 CA363861910 |
601 | V>F | No |
ClinGen TOPMed |
|
|
rs760448753 CA3783466 |
603 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3783467 rs760448753 |
603 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1290492014 CA363861922 |
603 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs776227256 CA3783468 |
604 | Q>R | No |
ClinGen ExAC |
|
|
rs1230316192 CA363861931 |
605 | G>R | No |
ClinGen gnomAD |
|
|
CA3783470 rs764360247 |
606 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs763245999 CA3783469 |
606 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA3783472 rs761951088 |
607 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA3783474 rs150569661 |
608 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3783473 rs149007517 |
608 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA363861965 rs1561945306 |
611 | Q>* | No |
ClinGen Ensembl |
|
|
CA363861974 rs1183749881 |
612 | L>Q | No |
ClinGen gnomAD |
|
|
CA3783475 rs756501016 |
612 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370793358 CA3783476 |
613 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3783478 rs754690941 |
616 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1163352345 CA363862002 |
616 | G>V | No |
ClinGen gnomAD |
|
|
rs778507562 CA3783479 |
619 | Y>C | No |
ClinGen ExAC TOPMed |
|
|
rs1004814705 CA137481866 |
621 | F>L | No |
ClinGen TOPMed |
|
|
rs1485175307 CA363862043 |
622 | K>N | No |
ClinGen TOPMed |
|
|
rs777758213 CA3783482 |
623 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA3783485 rs776503823 |
624 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs759208124 CA3783486 |
625 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 627 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA363862081 rs1226061183 |
628 | L>R | No |
ClinGen gnomAD |
|
|
COSM1444130 rs774689896 CA3783488 |
631 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA363862099 rs1342565500 |
631 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA363862101 rs1342565500 |
631 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1207068733 CA363862104 |
632 | W>G | No |
ClinGen TOPMed gnomAD |
|
|
CA363862114 rs1583332056 |
633 | V>G | No |
ClinGen Ensembl |
|
|
CA3783489 rs762040858 |
633 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA3783490 rs767699368 |
635 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA3783491 rs773099431 |
637 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363862138 rs773099431 |
637 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3783492 rs146814427 |
637 | E>V | No |
ClinGen ESP ExAC |
|
|
CA3783496 rs755277545 |
638 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA3783495 rs755277545 |
638 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA3783494 rs144179620 |
638 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA363862150 rs752345344 |
639 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA3783497 rs752345344 |
639 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 640 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA363862151 rs1583332127 |
640 | A>T | No |
ClinGen Ensembl |
|
|
CA363862158 rs1396820443 |
641 | S>G | No |
ClinGen gnomAD |
|
|
CA363862161 rs1336461145 |
641 | S>T | No |
ClinGen gnomAD |
|
|
rs1324736888 CA363862166 |
642 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3783498 rs757982768 |
643 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777282701 CA363862176 |
643 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3783499 rs777282701 |
643 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746451794 CA3783500 |
644 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA363862184 rs1230262386 |
644 | S>R | No |
ClinGen gnomAD |
|
|
rs780958149 CA3783502 |
645 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs757246009 CA363862185 |
645 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757246009 CA3783501 |
645 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363862203 rs1200655427 |
647 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1200655427 CA363862204 |
647 | W>C | No |
ClinGen TOPMed gnomAD |
|
|
CA3783503 rs370812051 |
648 | P>L | No |
ClinGen ESP ExAC gnomAD |
|
|
CA363862206 rs1280349007 |
648 | P>S | No |
ClinGen gnomAD |
|
|
CA3783507 rs748384279 |
650 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA3783505 rs774779856 |
650 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363862219 rs774779856 |
650 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1419365415 CA363862228 |
651 | G>E | No |
ClinGen TOPMed |
|
|
rs776992906 CA3783511 |
652 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766960075 CA3783510 |
652 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA137482007 rs760641082 |
652 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs760641082 CA3783509 |
652 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1383109188 CA363862245 |
654 | S>F | No |
ClinGen gnomAD |
|
|
rs267601004 CA363862251 |
655 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3783514 rs765593953 |
655 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| rs1253346270 | 656 | D>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
No associated diseases with Q7Z6J4
1 regional properties for Q7Z6J4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| conserved_site | Glycosyltransferase, DXD sugar-binding motif | 42 - 147 | IPR007577 |
Functions
9 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytoskeleton | A cellular structure that forms the internal framework of eukaryotic and prokaryotic cells. The cytoskeleton includes intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| early endosome membrane | The lipid bilayer surrounding an early endosome. |
| Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
| lamellipodium | A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| ruffle | Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork. |
| ruffle membrane | The portion of the plasma membrane surrounding a ruffle. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| guanyl-nucleotide exchange factor activity | Stimulates the exchange of GDP to GTP on a signaling GTPase, changing its conformation to its active form. Guanine nucleotide exchange factors (GEFs) act by stimulating the release of guanosine diphosphate (GDP) to allow binding of guanosine triphosphate (GTP), which is more abundant in the cell under normal cellular physiological conditions. |
| metal ion binding | Binding to a metal ion. |
| phosphatidylinositol phosphate binding | Binding to phosphatidylinositol phosphate. |
| small GTPase binding | Binding to a small monomeric GTPase. |
7 GO annotations of biological process
| Name | Definition |
|---|---|
| actin cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. |
| cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures. |
| filopodium assembly | The assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone. |
| positive regulation of JUN kinase activity | Any process that activates or increases the frequency, rate or extent of JUN kinase activity. |
| regulation of cell shape | Any process that modulates the surface configuration of a cell. |
| regulation of GTPase activity | Any process that modulates the rate of GTP hydrolysis by a GTPase. |
| regulation of small GTPase mediated signal transduction | Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction. |
4 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q5JSP0 | FGD3 | FYVE, RhoGEF and PH domain-containing protein 3 | Homo sapiens (Human) | PR |
| P98174 | FGD1 | FYVE, RhoGEF and PH domain-containing protein 1 | Homo sapiens (Human) | PR |
| P52734 | Fgd1 | FYVE, RhoGEF and PH domain-containing protein 1 | Mus musculus (Mouse) | PR |
| Q8BY35 | Fgd2 | FYVE, RhoGEF and PH domain-containing protein 2 | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKGASEEKLA | SVSNLVTVFE | NSRTPEAAPR | GQRLEDVHHR | PECRPPESPG | PREKTNVGEA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| VGSEPRTVSR | RYLNSLKNKL | SSEAWRKSCQ | PVTLSGSGTQ | EPEKKIVQEL | LETEQAYVAR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LHLLDQVFFQ | ELLKTARSSK | AFPEDVVRVI | FSNISSIYQF | HSQFFLPELQ | RRLDDWTANP |
| 190 | 200 | 210 | 220 | 230 | 240 |
| RIGDVIQKLA | PFLKMYSEYV | KNFERAAELL | ATWTDKSPLF | QEVLTRIQSS | EASGSLTLQH |
| 250 | 260 | 270 | 280 | 290 | 300 |
| HMLEPVQRIP | RYELLLKEYI | QKLPAQAPDQ | ADAQKALDMI | FSAAQHSNAA | ITEMERLQDL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| WEVYQRLGLE | DDIVDPSNTL | LREGPVLKIS | FRRNDPMERY | LFLFNNMLLY | CVPRVIQVGA |
| 370 | 380 | 390 | 400 | 410 | 420 |
| QFQVRTRIDV | AGMKVRELMD | AEFPHSFLVS | GKQRTLELQA | RSQEEMISWM | QAFQAAIDQI |
| 430 | 440 | 450 | 460 | 470 | 480 |
| EKRNETFKAA | AQGPEGDIQE | QELQSEELGL | RAPQWVRDKM | VTMCMRCQEP | FNALTRRRHH |
| 490 | 500 | 510 | 520 | 530 | 540 |
| CRACGYVVCA | RCSDYRAELK | YDDNRPNRVC | LHCYAFLTGN | VLPEAKEDKR | RGILEKGSSA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| TPDQSLMCSF | LQLIGDKWGK | SGPRGWCVIP | RDDPLVLYVY | AAPQDMRAHT | SIPLLGYQVT |
| 610 | 620 | 630 | 640 | 650 | |
| VGPQGDPRVF | QLQQSGQLYT | FKAETEELKG | RWVKAMERAA | SGWSPSWPND | GDLSD |