Q6ESZ9
Gene name |
SDC1 (Os02g0541325, LOC_Os02g33710, OJ1298_H07.24, OsJ_07054, P0472F10.2) |
Protein name |
Serine decarboxylase 1 |
Names |
|
Species |
Oryza sativa subsp japonica (Rice) |
KEGG Pathway |
osa:4329593 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q6ESZ9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q6ESZ9-F1 | Predicted | AlphaFoldDB |
No variants for Q6ESZ9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q6ESZ9 | |||||
No associated diseases with Q6ESZ9
1 regional properties for Q6ESZ9
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| binding_site | Pyridoxal-phosphate binding site | 305 - 326 | IPR021115 |
No GO annotations of cellular component
| Name | Definition |
|---|---|
| No GO annotations for cellular component |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| pyridoxal phosphate binding | Binding to pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6. |
| serine decarboxylase activity | Catalysis of the reaction: H+ + L-serine <=> ethanolaminium(1+) + carbon dioxide. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| carboxylic acid metabolic process | The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-). |
| nitrogen compound metabolic process | The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen. |
4 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| A6QM00 | GADL1 | Acidic amino acid decarboxylase GADL1 | Bos taurus (Bovine) | PR |
| Q6ZQY3 | GADL1 | Acidic amino acid decarboxylase GADL1 | Homo sapiens (Human) | PR |
| Q05329 | GAD2 | Glutamate decarboxylase 2 | Homo sapiens (Human) | PR |
| Q80WP8 | Gadl1 | Acidic amino acid decarboxylase GADL1 | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MVGSVGNGLV | DLGGAAVAVN | GVGKGMRPEA | VAVAMEVESP | PRPAEEEGEG | SPTRREIVLG |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RNVHTASFAV | KEPDADDEET | GEREAAMASV | LALYRRNLVE | RTKHHLGYPY | NLDFDYGALG |
| 130 | 140 | 150 | 160 | 170 | 180 |
| QLQHFSINNL | GDPFIESNYG | VHSRQFEVGV | LDWFARIWEL | EKNEYWGYIT | NCGTEGNLHG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| ILVGREVFPD | GILYASRESH | YSVFKAARMY | RMDCVKVDTL | ISGEIDCEDF | QRKLLLNRDK |
| 250 | 260 | 270 | 280 | 290 | 300 |
| PAIINVNIGT | TVKGAVDDLD | LVIKTLEEGG | FKDRFYIHCD | GALFGLMIPF | VKKAPKVSFK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| KPIGSVSVSG | HKFVGCPMPC | GVQITRLEHI | NRLSSNVEYL | ASRDATIMGS | RNGHAPIFLW |
| 370 | 380 | 390 | 400 | 410 | 420 |
| YTLNRKGYRG | FQKEVQKCLR | NAHYLKDRLK | EAGIGAMLNE | LSSTVVFERP | KDEEFVRRWQ |
| 430 | 440 | 450 | 460 | 470 | 480 |
| LACEGNIAHV | VVMPSVTIDK | LDYFLNELTE | KRATWYQDGS | CQPPCLAKDV | GEENCLCSIH |
| KK |