Q56YH2

PR
Gene name
At5g18780 (F17K4.30)
Protein name
FBD-associated F-box protein At5g18780
Names
Species
Arabidopsis thaliana (Mouse-ear cress)
KEGG Pathway
ath:AT5G18780
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

33-102 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q56YH2

Entry ID Method Resolution Chain Position Source
AF-Q56YH2-F1 Predicted AlphaFoldDB

23 variants for Q56YH2

Variant ID(s) Position Change Description Diseaes Association Provenance
tmp_5_6264619_C_T 4 R>* No 1000Genomes
tmp_5_6264632_G_T 8 S>I No 1000Genomes
tmp_5_6264634_G_T 9 G>W No 1000Genomes
tmp_5_6264814_T_G 69 F>V No 1000Genomes
ENSVATH03076957 79 E>K No 1000Genomes
tmp_5_6264969_T_A 120 F>L No 1000Genomes
ENSVATH06990508 158 L>F No 1000Genomes
tmp_5_6265141_A_T 178 I>F No 1000Genomes
ENSVATH06990509 242 Y>F No 1000Genomes
ENSVATH10841577 282 L>Q No 1000Genomes
tmp_5_6265594_A_T 302 Y>F No 1000Genomes
ENSVATH10841578 305 L>M No 1000Genomes
tmp_5_6265614_C_G 309 P>A No 1000Genomes
tmp_5_6265674_C_G 329 P>A No 1000Genomes
ENSVATH06990517 365 V>M No 1000Genomes
tmp_5_6265891_C_T 374 L>F No 1000Genomes
tmp_5_6265895_C_A 375 A>E No 1000Genomes
tmp_5_6265915_C_T 382 P>S No 1000Genomes
ENSVATH14083164 404 K>E No 1000Genomes
ENSVATH14083275 425 Q>* No 1000Genomes
ENSVATH00630385 428 Q>E No 1000Genomes
tmp_5_6266077_T_A 436 C>S No 1000Genomes
tmp_5_6266091_T_G 440 I>M No 1000Genomes

No associated diseases with Q56YH2

2 regional properties for Q56YH2

Type Name Position InterPro Accession
domain F-box domain 10 - 48 IPR001810
domain FBD domain 367 - 441 IPR006566

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

No GO annotations of cellular component

Name Definition
No GO annotations for cellular component

No GO annotations of molecular function

Name Definition
No GO annotations for molecular function

No GO annotations of biological process

Name Definition
No GO annotations for biological process

23 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q6NKX3 At2g04230 F-box/FBD/LRR-repeat protein At2g04230 Arabidopsis thaliana (Mouse-ear cress) PR
Q8LF09 At4g00160 F-box/FBD/LRR-repeat protein At4g00160 Arabidopsis thaliana (Mouse-ear cress) PR
Q9SMT9 At3g49020 FBD-associated F-box protein At3g49020 Arabidopsis thaliana (Mouse-ear cress) PR
Q9FF58 At5g60610 FBD-associated F-box protein At5g60610 Arabidopsis thaliana (Mouse-ear cress) PR
Q9FJV2 At5g56560 Putative FBD-associated F-box protein At5g56560 Arabidopsis thaliana (Mouse-ear cress) PR
Q9LJF9 At3g26920 F-box/FBD/LRR-repeat protein At3g26920 Arabidopsis thaliana (Mouse-ear cress) PR
Q3EAE5 At4g00315 Putative F-box/FBD/LRR-repeat protein At4g00315 Arabidopsis thaliana (Mouse-ear cress) PR
Q9LQM1 At1g32375 Probable FBD-associated F-box protein At1g32375 Arabidopsis thaliana (Mouse-ear cress) PR
Q9FM92 At5g56390 Putative FBD-associated F-box protein At5g56390 Arabidopsis thaliana (Mouse-ear cress) PR
Q9C8Y5 At1g66320 FBD-associated F-box protein At1g66320 Arabidopsis thaliana (Mouse-ear cress) PR
Q9C8Y6 At1g66310 FBD-associated F-box protein At1g66310 Arabidopsis thaliana (Mouse-ear cress) PR
Q9ZV94 At1g78760 Putative F-box/FBD/LRR-repeat protein At1g78760 Arabidopsis thaliana (Mouse-ear cress) PR
Q93ZK9 At5g18770 F-box/FBD/LRR-repeat protein At5g18770 Arabidopsis thaliana (Mouse-ear cress) PR
Q9LZZ2 At3g60710 Putative FBD-associated F-box protein At3g60710 Arabidopsis thaliana (Mouse-ear cress) PR
Q56XS8 At1g13780 F-box/FBD/LRR-repeat protein At1g13780 Arabidopsis thaliana (Mouse-ear cress) PR
Q9FLA3 At5g44940 Putative FBD-associated F-box protein At5g44940 Arabidopsis thaliana (Mouse-ear cress) PR
Q0V7P8 At5g27750 FBD-associated F-box protein At5g27750 Arabidopsis thaliana (Mouse-ear cress) PR
Q9FL99 At5g44980 F-box/FBD/LRR-repeat protein At5g44980 Arabidopsis thaliana (Mouse-ear cress) PR
Q1PFI4 At1g60400 F-box protein At1g60400 Arabidopsis thaliana (Mouse-ear cress) PR
O80762 At1g60410 FBD-associated F-box protein At1g60410 Arabidopsis thaliana (Mouse-ear cress) PR
Q9M8L5 At1g80470 F-box/FBD/LRR-repeat protein At1g80470 Arabidopsis thaliana (Mouse-ear cress) PR
Q9FJC0 At5g53640 Putative FBD-associated F-box protein At5g53640 Arabidopsis thaliana (Mouse-ear cress) PR
Q9FZ52 At1g16930 F-box/FBD/LRR-repeat protein At1g16930 Arabidopsis thaliana (Mouse-ear cress) PR
10 20 30 40 50 60
MQGRVRGSGE DRISILPEPL LCHILSFLRT KDSVRTSVLS SRWRDLWLWV PRLDLDKSDF
70 80 90 100 110 120
SDDNPSASFV DKFLNFRGES YLRGFKLNTD HDVYDISTLD ACLMRLDKCK IQHFEIENCF
130 140 150 160 170 180
GFCILLMPLI IPMCHTLVSL KLSFVILSKF GSLSLPCLEI MHFEKVIFPS DKSAEVLIAC
190 200 210 220 230 240
SPVLRDLRIS QSGDDAVEVL RVCSASLKSF TLKRTDHDYV GNGEYTVVID TPRLEYLNLK
250 260 270 280 290 300
DYQCQGFKIV SMSEYVRVHV DVVFEVIGGT VLSKRNIICD FLSCVSNVRY MTISRRSLEF
310 320 330 340 350 360
IYRHLELKPR FKFHDLARLR ATMFSNSSPE MLPVILETCP NLKHLTLELV HDSLVTEGTS
370 380 390 400 410 420
GLLTVLPRCL ISSLASVDIE SPITDKATEL KLVSYLLENS TTLKKLVLRL NQSCRDKYEP
430 440
GLLKQVLQSP RCSSLCQLVI L