Q56XS8

PR
Gene name
At1g13780 (F16A14.1)
Protein name
F-box/FBD/LRR-repeat protein At1g13780
Names
Species
Arabidopsis thaliana (Mouse-ear cress)
KEGG Pathway
ath:AT1G13780
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

401-456 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q56XS8

Entry ID Method Resolution Chain Position Source
AF-Q56XS8-F1 Predicted AlphaFoldDB

65 variants for Q56XS8

Variant ID(s) Position Change Description Diseaes Association Provenance
ENSVATH04572554 4 T>M No 1000Genomes
ENSVATH01048156 7 P>A No 1000Genomes
tmp_1_4724810_A_G 17 E>G No 1000Genomes
tmp_1_4724836_C_A 26 H>N No 1000Genomes
ENSVATH11168593 29 T>N No 1000Genomes
tmp_1_4724849_A_T 30 K>I No 1000Genomes
ENSVATH00022259 31 A>D No 1000Genomes
tmp_1_4724873_T_A 38 L>* No 1000Genomes
ENSVATH04572556 42 W>* No 1000Genomes
tmp_1_4724891_A_G 44 N>S No 1000Genomes
tmp_1_4724909_C_T 50 P>L No 1000Genomes
tmp_1_4724925_C_A 55 N>K No 1000Genomes
tmp_1_4724944_C_G 62 Q>E No 1000Genomes
ENSVATH04572557 66 E>* No 1000Genomes
tmp_1_4725001_A_T 81 N>Y No 1000Genomes
ENSVATH04572558 82 E>A No 1000Genomes
tmp_1_4725044_A_G 95 D>G No 1000Genomes
tmp_1_4725043_G_C 95 D>H No 1000Genomes
ENSVATH11168655 99 K>E No 1000Genomes
ENSVATH04572559 101 S>L No 1000Genomes
tmp_1_4725061_T_A 101 S>T No 1000Genomes
ENSVATH11168656 105 G>D No 1000Genomes
ENSVATH04572560 106 D>N No 1000Genomes
ENSVATH11168657 107 A>P No 1000Genomes
tmp_1_4725125_A_T 122 Y>F No 1000Genomes
tmp_1_4725131_G_C 124 R>P No 1000Genomes
tmp_1_4725134_A_C 125 D>A No 1000Genomes
tmp_1_4725190_T_A 144 S>T No 1000Genomes
tmp_1_4725200_C_T 147 T>I No 1000Genomes
tmp_1_4725224_A_T 155 Y>F No 1000Genomes
ENSVATH04572562 157 G>D No 1000Genomes
tmp_1_4725262_T_TA 168 C>* No 1000Genomes
tmp_1_4725273_C_G 171 F>L No 1000Genomes
ENSVATH11168658 190 L>R No 1000Genomes
ENSVATH04572564 197 L>F No 1000Genomes
tmp_1_4725379_A_G 207 K>E No 1000Genomes
ENSVATH11168659 212 R>G No 1000Genomes
ENSVATH00022261 219 K>* No 1000Genomes
tmp_1_4725421_T_G 221 F>V No 1000Genomes
tmp_1_4725427_A_G 223 I>V No 1000Genomes
ENSVATH04572565 227 H>Y No 1000Genomes
tmp_1_4725443_A_T 228 K>I No 1000Genomes
tmp_1_4725453_G_T 231 L>F No 1000Genomes
tmp_1_4725463_G_A 235 V>M No 1000Genomes
ENSVATH01048158 236 T>I No 1000Genomes
ENSVATH04572566 238 T>A No 1000Genomes
tmp_1_4725479_A_G 240 E>G No 1000Genomes
tmp_1_4725509_G_C 250 S>T No 1000Genomes
ENSVATH04572567 252 K>N No 1000Genomes
tmp_1_4725544_A_T 262 K>* No 1000Genomes
tmp_1_4725567_G_T 269 M>I No 1000Genomes
ENSVATH00022262 273 D>G No 1000Genomes
ENSVATH01048159 277 I>S No 1000Genomes
ENSVATH11168715 297 D>N No 1000Genomes
ENSVATH04572569 306 R>S No 1000Genomes
tmp_1_4725701_C_A 314 T>K No 1000Genomes
tmp_1_4725818_G_A 324 V>I No 1000Genomes
ENSVATH00022263 349 P>S No 1000Genomes
tmp_1_4726040_A_G 366 E>G No 1000Genomes
ENSVATH00022264 374 K>Q No 1000Genomes
tmp_1_4726095_C_A 384 F>L No 1000Genomes
ENSVATH01048161 423 S>N No 1000Genomes
ENSVATH11168720 436 I>M No 1000Genomes
tmp_1_4726258_G_A 439 E>K No 1000Genomes
ENSVATH01048162 444 T>A No 1000Genomes

No associated diseases with Q56XS8

4 regional properties for Q56XS8

Type Name Position InterPro Accession
conserved_site Aminoacyl-tRNA synthetase, class I, conserved site 190 - 201 IPR001412
domain Arginyl tRNA synthetase N-terminal domain 65 - 154 IPR005148
domain DALR anticodon binding 527 - 642 IPR008909
domain Arginyl-tRNA synthetase, catalytic core domain 163 - 513 IPR035684

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

No GO annotations of cellular component

Name Definition
No GO annotations for cellular component

No GO annotations of molecular function

Name Definition
No GO annotations for molecular function

No GO annotations of biological process

Name Definition
No GO annotations for biological process

23 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q6NKX3 At2g04230 F-box/FBD/LRR-repeat protein At2g04230 Arabidopsis thaliana (Mouse-ear cress) PR
Q8LF09 At4g00160 F-box/FBD/LRR-repeat protein At4g00160 Arabidopsis thaliana (Mouse-ear cress) PR
Q9SMT9 At3g49020 FBD-associated F-box protein At3g49020 Arabidopsis thaliana (Mouse-ear cress) PR
Q9FF58 At5g60610 FBD-associated F-box protein At5g60610 Arabidopsis thaliana (Mouse-ear cress) PR
Q9FJV2 At5g56560 Putative FBD-associated F-box protein At5g56560 Arabidopsis thaliana (Mouse-ear cress) PR
Q9LJF9 At3g26920 F-box/FBD/LRR-repeat protein At3g26920 Arabidopsis thaliana (Mouse-ear cress) PR
Q3EAE5 At4g00315 Putative F-box/FBD/LRR-repeat protein At4g00315 Arabidopsis thaliana (Mouse-ear cress) PR
Q9LQM1 At1g32375 Probable FBD-associated F-box protein At1g32375 Arabidopsis thaliana (Mouse-ear cress) PR
Q9FM92 At5g56390 Putative FBD-associated F-box protein At5g56390 Arabidopsis thaliana (Mouse-ear cress) PR
Q9C8Y5 At1g66320 FBD-associated F-box protein At1g66320 Arabidopsis thaliana (Mouse-ear cress) PR
Q9C8Y6 At1g66310 FBD-associated F-box protein At1g66310 Arabidopsis thaliana (Mouse-ear cress) PR
Q9ZV94 At1g78760 Putative F-box/FBD/LRR-repeat protein At1g78760 Arabidopsis thaliana (Mouse-ear cress) PR
Q93ZK9 At5g18770 F-box/FBD/LRR-repeat protein At5g18770 Arabidopsis thaliana (Mouse-ear cress) PR
Q9LZZ2 At3g60710 Putative FBD-associated F-box protein At3g60710 Arabidopsis thaliana (Mouse-ear cress) PR
Q9FLA3 At5g44940 Putative FBD-associated F-box protein At5g44940 Arabidopsis thaliana (Mouse-ear cress) PR
Q0V7P8 At5g27750 FBD-associated F-box protein At5g27750 Arabidopsis thaliana (Mouse-ear cress) PR
Q9FL99 At5g44980 F-box/FBD/LRR-repeat protein At5g44980 Arabidopsis thaliana (Mouse-ear cress) PR
O80762 At1g60410 FBD-associated F-box protein At1g60410 Arabidopsis thaliana (Mouse-ear cress) PR
Q9M8L5 At1g80470 F-box/FBD/LRR-repeat protein At1g80470 Arabidopsis thaliana (Mouse-ear cress) PR
Q9FJC0 At5g53640 Putative FBD-associated F-box protein At5g53640 Arabidopsis thaliana (Mouse-ear cress) PR
Q9FZ52 At1g16930 F-box/FBD/LRR-repeat protein At1g16930 Arabidopsis thaliana (Mouse-ear cress) PR
Q1PFI4 At1g60400 F-box protein At1g60400 Arabidopsis thaliana (Mouse-ear cress) PR
Q56YH2 At5g18780 FBD-associated F-box protein At5g18780 Arabidopsis thaliana (Mouse-ear cress) PR
10 20 30 40 50 60
MESTVMPGFD RISELPESLI SQILLHLPTK ASVKTSVLST RWKNLWLNVP GLDLNCRDFP
70 80 90 100 110 120
FQNNNEKLLI DFIDRFLQFN NESRLQKFKV DYSRDKIIKF SDRIGDAISR GIRVLDVESN
130 140 150 160 170 180
TYYRDADDCI DYPCIEFMPL NLYSCKTLVS LKLSYSGLED PGFVYLPCLK FMHLREVRWD
190 200 210 220 230 240
SSGTMNLEKL VSGCPVLEEL IYLHDDKLVV TRVRSRSLKR FSIPFRHKLS LFRRVTQTFE
250 260 270 280 290 300
IDAPGLEYMS LKADHFDRIV VKNLTSLFMI DLDIKFIVGF GWMFDPEDLP KRNEIRDFLT
310 320 330 340 350 360
GISSVRHMVI SHNTVKALDL YSKVGLIPKF NNLSRVEAAF PSSLLQFLPA FLESFPNLKH
370 380 390 400 410 420
LILETECPVE VMEKFELVNV PRCFVSTLEH VEIKGLFDWG EQDMKIASYF LENSAVLKKL
430 440 450
ILSFMGCPQH YSESDIYEEL NKLTKRSPRC QIIIRC