Q15678
Gene name |
PTPN14 (PEZ, PTPD2) |
Protein name |
Tyrosine-protein phosphatase non-receptor type 14 |
Names |
Protein-tyrosine phosphatase pez |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:5784 |
EC number |
3.1.3.48: Phosphoric monoester hydrolases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
4 structures for Q15678
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 2BZL | X-ray | 165 A | A | 886-1187 | PDB |
| 6IWD | X-ray | 180 A | A | 886-1187 | PDB |
| 6JJW | X-ray | 240 A | U | 428-455 | PDB |
| AF-Q15678-F1 | Predicted | AlphaFoldDB |
965 variants for Q15678
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1558092113 RCV000735851 |
135 | L>missing | Lymphedema-posterior choanal atresia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs766589564 CA1389609 |
2 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA1389606 rs768321673 |
7 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs529225480 CA1389605 |
8 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs1163977676 CA344898682 |
8 | R>L | No |
ClinGen gnomAD |
|
|
CA344898675 rs745738475 |
10 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA1389601 rs372985987 |
10 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs745738475 CA1389602 |
10 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA344898669 rs1169887985 |
11 | R>L | No |
ClinGen Ensembl |
|
|
CA344898671 rs1208190830 |
11 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA1389600 rs770580886 |
12 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA37566103 rs201853931 |
12 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs747289324 CA1389598 |
13 | Y>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 14 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1572016840 CA344898652 |
14 | N>S | No |
ClinGen Ensembl |
|
|
COSM1290108 CA1389596 rs758671755 |
15 | V>I | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA344898637 rs1308483071 |
17 | S>G | No |
ClinGen gnomAD |
|
|
rs779134274 CA1389594 |
17 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs755550653 CA1389593 |
18 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1394555662 CA344898624 |
19 | N>H | No |
ClinGen TOPMed |
|
|
CA37566102 rs779454963 |
19 | N>S | No |
ClinGen Ensembl |
|
| TCGA novel | 19 | N>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344898609 rs1303629286 |
21 | F>I | No |
ClinGen gnomAD |
|
|
rs1303629286 CA344898608 |
21 | F>L | No |
ClinGen gnomAD |
|
|
CA1389592 rs754342611 |
23 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA1389591 COSM1222531 rs201332095 |
24 | R>Q | oesophagus large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA344898577 rs1365801352 |
26 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
COSM903726 CA1389589 rs750774630 |
26 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA1389587 rs762584931 |
28 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs543676404 CA1389586 |
30 | S>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA344898544 rs757605436 |
31 | N>K | No |
ClinGen TOPMed |
|
|
CA1389585 rs151121546 |
31 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs759490690 CA1389584 |
32 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs777351477 CA1389581 |
34 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777612164 CA1389580 |
35 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772489574 CA344898513 |
36 | T>K | No |
ClinGen ExAC gnomAD |
|
|
rs772489574 CA1389579 |
36 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs1406647814 CA344898504 |
38 | S>A | No |
ClinGen gnomAD |
|
| TCGA novel | 39 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1389575 rs200399097 |
39 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs780472035 CA1389574 |
42 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs752296242 CA1389569 |
51 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA1389568 rs764757830 |
51 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1572016711 CA344898391 |
55 | E>G | No |
ClinGen Ensembl |
|
|
rs776185401 CA1389566 |
57 | R>* | No |
ClinGen ExAC gnomAD |
|
|
CA1389567 rs776185401 |
57 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA37566096 rs755709746 |
57 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA1389565 rs755709746 |
57 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| rs1412318782 | 59 | T>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781692713 CA1389533 |
59 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs6661410 CA1389532 |
59 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs747434060 CA1389531 |
65 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1445675479 CA344898306 |
66 | F>V | No |
ClinGen gnomAD |
|
|
rs1387484933 CA344898275 |
70 | S>N | No |
ClinGen gnomAD |
|
|
rs1184976049 CA344898258 |
72 | Q>R | No |
ClinGen gnomAD |
|
|
CA344898247 rs1231768356 |
74 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs754591855 CA1389529 |
74 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs775195710 CA37563345 |
75 | W>L | No |
ClinGen Ensembl |
|
| TCGA novel | 76 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs956920293 CA37563342 |
76 | V>L | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 77 | E>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1359805727 CA344898223 |
78 | L>M | No |
ClinGen gnomAD |
|
|
rs765832822 CA1389527 |
78 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA1389526 rs755612369 |
81 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 83 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs140596318 CA1389525 |
83 | K>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs767617692 CA1389524 |
84 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1348635970 CA344898177 |
85 | H>Y | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 87 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1303010908 CA344898143 |
89 | F>L | No |
ClinGen gnomAD |
|
|
rs77713106 CA1389522 RCV000946555 |
90 | A>T | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs763887958 CA1389521 |
91 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs1023660367 CA37563318 |
91 | N>S | No |
ClinGen TOPMed |
|
|
CA1389520 rs775740161 |
93 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769874591 CA1389518 |
93 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344898123 rs775740161 |
93 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775740161 CA1389519 |
93 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1177268412 CA344898114 |
94 | L>F | No |
ClinGen gnomAD |
|
|
rs1470847617 CA344898112 |
95 | L>F | No |
ClinGen gnomAD |
|
|
CA344898113 rs1470847617 |
95 | L>V | No |
ClinGen gnomAD |
|
|
CA1389517 rs759708590 |
96 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1572008726 CA344898076 |
100 | M>T | No |
ClinGen Ensembl |
|
|
rs776681158 CA1389516 |
102 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1242544329 CA344898052 |
103 | V>A | No |
ClinGen TOPMed |
|
|
rs771496321 CA1389515 |
104 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA37563306 rs962182089 |
104 | P>S | No |
ClinGen Ensembl |
|
|
rs747450431 CA1389514 |
105 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA1389513 rs778125245 |
106 | V>M | Variant assessed as Somatic; 0.0003234 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA344897985 rs772437258 |
113 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs772437258 CA1389512 |
113 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA344897983 rs1161362278 |
114 | T>A | No |
ClinGen TOPMed |
|
|
CA1389490 rs377107337 |
115 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344817486 rs1386394826 |
116 | Y>N | No |
ClinGen TOPMed |
|
|
rs1403276871 CA344817450 |
118 | Y>C | No |
ClinGen gnomAD |
|
| TCGA novel | 122 | V>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344817348 rs1216890427 |
124 | K>E | No |
ClinGen TOPMed |
|
|
CA344817332 rs1278051669 |
125 | D>H | No |
ClinGen TOPMed |
|
|
rs745456375 CA1389486 |
128 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1427876250 CA344817265 |
130 | R>G | No |
ClinGen gnomAD |
|
|
CA1389485 rs780867837 |
130 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA344817247 rs1188096687 |
132 | R>G | No |
ClinGen gnomAD |
|
|
CA1389484 rs139895368 |
132 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1242835470 CA344817239 |
133 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
rs572475311 CA1389483 |
133 | C>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 135 | L>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1249723264 CA344817163 |
138 | V>M | No |
ClinGen gnomAD |
|
|
rs1308653307 CA344817146 |
139 | I>S | No |
ClinGen gnomAD |
|
|
CA344817147 rs1308653307 |
139 | I>T | No |
ClinGen gnomAD |
|
|
CA1389479 rs368851967 |
140 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs533046202 CA1389480 |
140 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755471806 CA1389477 |
143 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389478 rs755471806 |
143 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1024564971 CA37395656 |
145 | A>T | No |
ClinGen Ensembl |
|
|
rs568375121 CA1389474 |
146 | V>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1389475 rs760788549 |
146 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389448 rs775984118 |
149 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA1389447 rs770773880 |
150 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389446 rs746576679 |
152 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA344816441 rs1225234098 |
152 | D>V | No |
ClinGen gnomAD |
|
| TCGA novel | 157 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344816363 rs1328850368 |
157 | D>H | No |
ClinGen TOPMed |
|
|
rs1237891647 CA344816328 |
158 | S>F | No |
ClinGen gnomAD |
|
|
rs772792425 CA1389445 |
159 | Q>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| VAR_035849 | 159 | Q>E | a breast cancer sample; somatic mutation [UniProt] | No | UniProt |
|
rs1040143388 CA37392930 |
160 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA1389444 rs771437100 |
162 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA1389443 rs748149541 |
163 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1303530484 CA344816236 |
164 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA1389442 rs543335039 |
164 | E>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA37392884 rs910227014 |
166 | V>L | No |
ClinGen Ensembl |
|
|
rs1158148517 CA344816124 |
170 | M>T | No |
ClinGen gnomAD |
|
|
COSM339388 CA344816133 rs1368165379 |
170 | M>V | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA37385313 rs200017090 |
171 | D>G | No |
ClinGen 1000Genomes |
|
|
CA344815031 rs1474731103 |
171 | D>H | No |
ClinGen gnomAD |
|
|
CA37385312 rs868799535 |
173 | A>V | No |
ClinGen TOPMed |
|
| TCGA novel | 174 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781316965 CA1389418 |
175 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA1389417 rs757485231 |
176 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA1389416 rs751656933 |
177 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs777931812 CA344814989 |
178 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777931812 CA1389415 |
178 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 180 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs765729691 CA344814974 |
180 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773274066 CA1389414 |
180 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753206603 CA1389413 |
180 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA344814973 rs1337419750 |
181 | E>K | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 183 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA37385231 rs540862568 |
183 | T>S | No |
ClinGen gnomAD |
|
|
CA1389409 rs767136191 |
186 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs373567360 CA1389407 |
188 | Q>R | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 189 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1389406 rs55801232 |
189 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1389405 rs748532455 |
190 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA1389404 rs775443271 |
192 | A>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 193 | H>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1389402 rs745706524 |
193 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 194 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs773610604 CA1389380 |
195 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs1412200141 CA344814861 |
196 | I>V | No |
ClinGen gnomAD |
|
|
CA1389379 rs772402224 |
199 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA1389378 rs748300042 |
201 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748300042 CA344814821 |
201 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389377 rs779048293 |
206 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs755449161 CA1389376 |
207 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1406543993 CA344814759 |
209 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs780310335 CA1389374 |
210 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs145391227 CA1389373 |
211 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1389372 rs367585938 |
211 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs145391227 CA344814747 |
211 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1190445961 CA344814724 |
214 | G>A | No |
ClinGen TOPMed |
|
|
CA1389371 rs763791314 |
215 | F>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 218 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761855974 CA37383901 |
222 | V>I | No |
ClinGen Ensembl |
|
| TCGA novel | 225 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs768735006 CA1389342 |
225 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 226 | H>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1389341 rs763147498 |
228 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs1408890299 CA344814310 |
229 | C>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1360886869 CA344814305 |
230 | V>A | No |
ClinGen gnomAD |
|
|
CA1389340 rs775425639 |
236 | F>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344814242 rs1189510333 COSM678664 |
237 | M>I | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA344814246 rs1442539632 |
237 | M>T | No |
ClinGen TOPMed |
|
|
CA1389339 rs770288131 |
237 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA1389338 rs746314677 |
239 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781557835 CA1389337 |
241 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389334 rs549847772 |
245 | I>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1242588140 CA344814181 |
245 | I>T | No |
ClinGen gnomAD |
|
|
CA1389335 rs549847772 |
245 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs187138225 CA1389333 |
246 | G>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA344814174 rs1484523507 |
247 | R>G | No |
ClinGen gnomAD |
|
|
CA37377570 rs894786547 |
247 | R>K | No |
ClinGen Ensembl |
|
|
CA1389332 rs753456960 |
249 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1254744553 CA344814105 |
255 | N>D | No |
ClinGen TOPMed |
|
|
rs1351074708 CA344814098 |
256 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1558083835 CA344814093 |
256 | D>V | No |
ClinGen Ensembl |
|
|
CA1389306 rs781333762 |
257 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA1389304 rs751371890 |
259 | N>S | No |
ClinGen ExAC |
|
|
CA1389303 rs763737003 |
260 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA344814068 rs1364740276 |
260 | I>V | No |
ClinGen gnomAD |
|
|
rs758667925 CA1389302 |
262 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA344814030 COSM903718 rs1158524710 |
265 | S>L | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
| TCGA novel | 266 | T>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1163107684 CA344814023 |
266 | T>I | No |
ClinGen TOPMed |
|
|
CA1389300 rs765413797 |
268 | L>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 269 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs776681002 CA1389298 |
269 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs918372070 CA37374818 |
270 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs372638270 CA37374798 |
272 | I>V | No |
ClinGen ESP TOPMed |
|
|
CA1389297 rs202003994 |
273 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 274 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1389296 rs761022697 |
275 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344813968 rs1210016787 |
275 | E>G | No |
ClinGen gnomAD |
|
|
CA344813946 rs1364586620 |
278 | A>V | No |
ClinGen TOPMed |
|
|
CA344813945 rs1258402565 |
279 | L>F | No |
ClinGen gnomAD |
|
|
rs1227318018 CA344813924 |
281 | H>Q | No |
ClinGen gnomAD |
|
|
rs1329761592 CA344813922 |
282 | T>A | No |
ClinGen gnomAD |
|
|
rs1320692007 CA344813918 |
282 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
CA344813894 rs1187487988 |
284 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA344813885 rs1270799193 |
285 | I>T | No |
ClinGen TOPMed |
|
|
CA344813878 rs1370013259 |
286 | E>G | No |
ClinGen Ensembl |
|
|
rs1571971031 CA344813856 |
289 | K>R | No |
ClinGen Ensembl |
|
|
CA1389274 rs774793928 |
293 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389275 rs57950654 |
293 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs769639797 CA1389273 |
295 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759251877 CA1389272 |
297 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA1389271 rs776255185 |
298 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs371765337 COSM1668456 CA1389270 |
300 | K>E | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1367674651 CA344813755 |
304 | Q>L | No |
ClinGen gnomAD |
|
|
rs1367674651 CA344813757 |
304 | Q>P | No |
ClinGen gnomAD |
|
|
CA1389269 rs746488009 |
305 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA37373871 rs368229778 |
306 | K>E | No |
ClinGen ESP |
|
| TCGA novel | 309 | T>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1341157161 CA344813714 |
310 | E>A | No |
ClinGen gnomAD |
|
|
CA37373862 rs990222976 |
310 | E>K | No |
ClinGen Ensembl |
|
|
CA37371211 rs199872879 |
311 | Q>R | No |
ClinGen gnomAD |
|
| TCGA novel | 313 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs752408307 CA37371182 |
314 | S>F | No |
ClinGen Ensembl |
|
|
CA344813665 rs1571968939 |
315 | P>L | No |
ClinGen Ensembl |
|
|
CA1389245 rs748062297 |
316 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA1389246 rs748062297 |
316 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA1389244 rs768406459 |
317 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1026025956 CA37371079 |
317 | P>R | No |
ClinGen TOPMed |
|
|
CA1389243 rs768406459 |
317 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756297763 CA1389240 |
318 | I>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 318 | I>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1261819782 CA344813653 |
318 | I>S | No |
ClinGen TOPMed |
|
| TCGA novel | 319 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs750538905 COSM3418726 CA1389239 |
320 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1452448513 CA344813639 |
321 | Q>E | No |
ClinGen gnomAD |
|
|
CA37371044 rs142604891 |
322 | P>H | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA344813629 rs1222194068 |
322 | P>S | No |
ClinGen gnomAD |
|
|
rs1230801309 CA344813624 |
323 | T>A | No |
ClinGen gnomAD |
|
|
rs780659956 CA37371023 |
323 | T>I | No |
ClinGen TOPMed |
|
|
CA344813625 rs1230801309 |
323 | T>P | No |
ClinGen gnomAD |
|
|
CA344813618 rs752084020 |
324 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA344813620 rs1343968353 |
324 | W>R | No |
ClinGen gnomAD |
|
|
CA1389236 rs752084020 |
324 | W>S | No |
ClinGen ExAC gnomAD |
|
|
rs997254846 CA344813605 |
326 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA37371005 rs997254846 |
326 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs764657012 CA1389235 |
326 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1455134141 CA344813602 |
327 | S>P | No |
ClinGen gnomAD |
|
|
rs761330469 CA1389210 |
330 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA344813561 rs1314270911 |
331 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs773789738 CA1389209 |
332 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389208 rs373278311 |
334 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs769603309 CA1389205 |
336 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA37367171 rs1054125940 |
338 | P>R | No |
ClinGen Ensembl |
|
|
CA1389204 rs745612400 |
338 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs747090290 CA344813509 |
340 | V>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA1389201 rs747090290 |
340 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389200 rs777995212 |
342 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1201138146 CA344813483 |
344 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
CA344813473 rs1250451328 |
345 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA344813474 rs1490394538 |
345 | G>S | No |
ClinGen gnomAD |
|
|
rs758886972 CA1389199 |
347 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1297233997 CA344813451 |
348 | Y>C | No |
ClinGen TOPMed |
|
|
CA344813446 rs748664799 |
349 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389197 rs779183230 |
349 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389198 rs748664799 |
349 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389196 COSM903717 rs143452475 |
351 | T>M | endometrium [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA344813429 rs1250056867 |
352 | H>D | No |
ClinGen gnomAD |
|
|
CA344813426 rs1204965393 |
352 | H>R | No |
ClinGen gnomAD |
|
|
CA344813386 rs1487322856 |
356 | D>G | No |
ClinGen gnomAD |
|
|
CA37365266 rs1030527149 |
359 | F>C | No |
ClinGen Ensembl |
|
|
RCV000880370 CA1389173 COSM32454 VAR_035850 rs112523432 |
360 | H>P | breast a breast cancer sample; somatic mutation [Cosmic, UniProt] | No |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
| TCGA novel | 360 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1338744 rs112523432 CA344813358 |
360 | H>R | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA37365262 rs868014027 |
360 | H>Y | No |
ClinGen Ensembl |
|
|
CA344813351 rs1393093490 |
361 | G>E | No |
ClinGen TOPMed |
|
|
CA1389170 rs376896570 |
365 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376896570 CA1389171 |
365 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389168 rs373126145 |
368 | C>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1350831197 CA344813300 |
368 | C>Y | No |
ClinGen gnomAD |
|
|
rs759542377 CA1389167 |
369 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1294353911 CA344813282 |
371 | H>R | No |
ClinGen gnomAD |
|
|
CA1389166 rs753742596 |
371 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389165 rs369899314 |
372 | N>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 373 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344813249 rs1316312793 COSM1235186 |
376 | L>V | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs761016825 CA1389164 |
378 | Y>D | No |
ClinGen ExAC gnomAD |
|
|
CA1389163 rs773598210 |
380 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs200568435 CA37365187 |
382 | T>A | No |
ClinGen gnomAD |
|
|
CA1389161 rs761964158 |
382 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1191421477 CA344813186 |
385 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
rs774224839 CA1389160 |
385 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA37365155 rs190693661 |
388 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1389158 rs190693661 |
388 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1430884084 CA344813163 |
389 | C>Y | No |
ClinGen TOPMed |
|
|
CA344813153 rs372311664 |
390 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368855789 CA37365138 |
391 | V>I | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA1389154 rs777497605 COSM903715 |
394 | V>I | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1443408979 CA344813122 |
395 | N>T | No |
ClinGen TOPMed gnomAD |
|
|
CA1389153 rs757922379 |
397 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344813101 rs1458224924 |
398 | N>K | No |
ClinGen gnomAD |
|
|
CA37365105 rs887499908 |
398 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs539446074 CA1389152 |
399 | C>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs539446074 CA344813096 |
399 | C>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM209868 CA1389151 rs778272936 |
400 | S>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA344813084 rs1378610100 |
401 | Q>P | No |
ClinGen gnomAD |
|
|
CA344813079 rs1455345996 |
402 | S>G | No |
ClinGen gnomAD |
|
|
rs1265312625 CA344813076 |
402 | S>N | No |
ClinGen TOPMed |
|
|
rs755992014 CA1389147 |
403 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA1389146 rs750124787 |
404 | I>S | No |
ClinGen ExAC gnomAD |
|
|
rs928940880 CA37365080 |
405 | Q>K | No |
ClinGen Ensembl |
|
|
rs767779808 CA1389145 |
405 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA1389144 rs761934022 |
406 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA37362929 rs746776069 |
408 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA1389141 CA344813013 rs762982065 |
412 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs764054189 CA1389142 |
412 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA1389140 rs776001318 |
413 | L>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344812993 rs1296946191 |
415 | I>M | No |
ClinGen gnomAD |
|
|
CA1389139 rs770228971 |
418 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs141247660 CA344812977 |
418 | S>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs141247660 CA1389138 RCV000890506 |
418 | S>N | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs776855837 CA1389137 |
420 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs771815955 COSM1338742 CA1389136 |
421 | M>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs757598931 CA344812951 |
422 | R>P | No |
ClinGen gnomAD |
|
|
rs757598931 CA37362895 |
422 | R>Q | No |
ClinGen gnomAD |
|
|
CA1389135 rs747732994 |
422 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1167574005 CA344812940 |
424 | D>G | No |
ClinGen gnomAD |
|
|
rs975792365 CA37362865 |
424 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA344812924 rs1571964417 |
426 | I>T | No |
ClinGen Ensembl |
|
|
rs1425259254 CA344812927 |
426 | I>V | No |
ClinGen TOPMed |
|
|
CA344812920 rs1185303382 |
427 | P>T | No |
ClinGen gnomAD |
|
|
CA37362864 rs1015605584 |
429 | H>Q | No |
ClinGen TOPMed |
|
|
CA1389130 rs756046885 |
430 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs780150449 CA1389131 |
430 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773073343 CA1389129 |
433 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389128 rs150011976 COSM1581558 |
433 | A>V | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1341505880 CA344812869 |
435 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs374978011 CA1389125 |
436 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1341661220 CA344812848 |
438 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs988857630 CA37362812 |
440 | R>M | No |
ClinGen Ensembl |
|
|
rs775483848 CA1389123 |
441 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA37362793 rs1007171906 |
442 | T>A | No |
ClinGen TOPMed |
|
|
CA344812823 rs1306972265 |
442 | T>I | No |
ClinGen gnomAD |
|
|
CA1389121 rs151194443 |
444 | D>E | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1242280205 CA344812812 |
444 | D>G | No |
ClinGen TOPMed |
|
|
CA1389120 rs550116244 |
445 | Y>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1472417193 CA344812790 |
447 | T>K | No |
ClinGen gnomAD |
|
|
CA344812774 rs1244400215 |
449 | M>I | No |
ClinGen Ensembl |
|
|
rs368369053 CA1389119 |
450 | R>C | No |
ClinGen ESP ExAC gnomAD |
|
|
rs373748699 CA1389118 |
450 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773895428 CA1389117 |
452 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA344812742 rs1553260505 |
454 | R>T | No |
ClinGen Ensembl |
|
|
rs768362212 CA1389116 |
456 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA1389115 rs748809179 |
456 | I>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 458 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779702256 CA1389114 |
459 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344812698 rs1209378969 |
461 | S>N | No |
ClinGen gnomAD |
|
|
rs375333577 CA37362688 |
462 | Q>R | No |
ClinGen Ensembl |
|
|
rs1295608324 CA344812679 |
463 | S>R | No |
ClinGen gnomAD |
|
|
CA1389112 rs745765621 |
464 | Q>R | No |
ClinGen ExAC |
|
|
rs757027668 CA1389110 |
471 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1363903173 CA344812607 |
474 | T>N | No |
ClinGen gnomAD |
|
|
rs143386940 CA344812600 |
475 | H>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs143386940 CA1389107 |
475 | H>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA344812596 rs1321187740 |
476 | A>T | No |
ClinGen gnomAD |
|
|
rs1444606285 CA344812587 |
477 | Y>C | No |
ClinGen gnomAD |
|
|
rs765278974 CA1389105 |
478 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA344812559 rs1241814143 |
479 | Q>K | No |
ClinGen gnomAD |
|
|
rs1455625530 CA344812503 |
482 | D>Y | No |
ClinGen gnomAD |
|
| TCGA novel | 483 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs754332348 CA1389103 |
484 | V>E | No |
ClinGen ExAC gnomAD |
|
|
COSM1689820 rs144475962 CA1389101 |
488 | P>L | skin [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs775186368 CA1389097 |
491 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389098 rs138557012 COSM903713 |
491 | R>W | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1571964139 CA344812260 |
494 | H>P | No |
ClinGen Ensembl |
|
|
CA344812250 rs1307790474 |
494 | H>Q | No |
ClinGen TOPMed |
|
|
rs533121607 CA37362600 |
495 | P>S | No |
ClinGen Ensembl |
|
|
rs1353638942 CA344812200 |
497 | T>A | No |
ClinGen TOPMed |
|
|
CA344812192 rs1241248803 |
497 | T>I | No |
ClinGen TOPMed |
|
|
rs150454149 CA1389094 |
498 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1056110834 CA37362565 |
499 | P>A | No |
ClinGen Ensembl |
|
|
rs746848457 CA1389092 |
500 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389091 rs768029636 |
501 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA37362538 rs768029636 |
501 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs12239356 CA1389089 VAR_046995 |
505 | V>F | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs12239356 CA344812029 |
505 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 506 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1389087 rs377347379 |
507 | S>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs753895421 CA1389086 |
507 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA344811969 rs1439042766 |
509 | K>I | No |
ClinGen TOPMed |
|
| TCGA novel | 509 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1159762653 CA344811949 |
510 | L>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA1389085 rs373693050 |
512 | S>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1172190525 CA344811848 |
517 | R>K | No |
ClinGen gnomAD |
|
|
rs1454901087 CA344811843 |
517 | R>S | No |
ClinGen gnomAD |
|
|
rs761236929 CA1389084 |
518 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs767967885 CA1389082 |
525 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA1389081 rs141184727 |
528 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs758976654 CA1389078 |
529 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs143681518 CA1389079 |
529 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370556879 CA1389077 |
530 | A>T | No |
ClinGen ESP ExAC gnomAD |
|
|
COSM3689342 rs373438300 CA1389075 |
532 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA gnomAD |
|
CA1389074 COSM425274 rs200531948 |
534 | S>L | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs771884338 CA1389073 |
536 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA37362357 rs79745253 |
536 | T>M | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA344811599 rs1558078561 |
537 | V>G | No |
ClinGen Ensembl |
|
|
CA344811602 rs1262055249 |
537 | V>M | No |
ClinGen TOPMed |
|
|
rs1397054230 CA344811593 |
538 | S>N | No |
ClinGen gnomAD |
|
|
CA344811588 rs1571963952 |
539 | T>P | No |
ClinGen Ensembl |
|
|
CA344811563 rs1448896196 |
543 | A>T | No |
ClinGen gnomAD |
|
|
CA1389070 rs755160042 |
544 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA344811546 rs1188782149 |
545 | M>T | No |
ClinGen gnomAD |
|
|
rs1482587888 CA344811541 |
546 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
CA1389069 rs749390440 |
547 | L>R | No |
ClinGen ExAC |
|
|
CA1389066 rs750926595 |
548 | Q>* | No |
ClinGen ExAC |
|
|
CA1389065 rs768092144 |
548 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA1389063 rs200330119 |
549 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs1571963891 CA344811513 |
550 | S>N | No |
ClinGen Ensembl |
|
|
CA344811501 rs1281939405 |
552 | N>H | No |
ClinGen gnomAD |
|
|
rs764865961 CA1389062 |
553 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA344811487 rs759213710 |
554 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs759213710 CA1389061 |
554 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA1389060 rs776055399 |
555 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs760136630 CA344811474 |
556 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389058 rs760136630 |
556 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747941349 CA1389055 |
558 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389057 rs773153782 |
558 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs771939467 CA344811459 |
558 | M>R | No |
ClinGen ExAC gnomAD |
|
|
CA1389056 rs771939467 |
558 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs774188936 CA1389054 |
560 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1185967860 CA344811434 |
562 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
rs768814834 CA1389053 COSM1581556 |
562 | Y>S | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA1389052 rs749502062 |
564 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA344811406 rs1471098750 |
566 | P>S | No |
ClinGen TOPMed |
|
|
rs145779086 CA1389051 |
567 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1553260453 CA344811397 |
568 | P>T | No |
ClinGen Ensembl |
|
|
CA1389049 rs745887539 |
569 | P>R | No |
ClinGen ExAC gnomAD |
|
| rs1202548219 | 570 | Y>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1448992600 CA344811381 |
570 | Y>S | No |
ClinGen gnomAD |
|
|
CA1389047 rs757838276 |
571 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344811376 rs1480142525 |
571 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs200947677 CA344811373 |
572 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1389045 rs754628465 |
572 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389044 rs754628465 |
572 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754628465 CA37362072 |
572 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200947677 CA1389046 COSM1338738 |
572 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA344811365 rs1275722362 |
574 | R>* | No |
ClinGen TOPMed |
|
|
CA1389041 rs760189624 |
574 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs772641873 CA1389040 |
576 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1180120264 CA344811346 |
577 | T>S | No |
ClinGen Ensembl |
|
|
rs767508805 CA1389039 |
578 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA344811327 rs1374406925 |
580 | P>L | No |
ClinGen gnomAD |
|
|
CA344811320 rs761722509 |
581 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1349405154 CA344811304 |
584 | S>T | No |
ClinGen gnomAD |
|
|
rs774058859 CA1389037 |
585 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1389036 rs768464771 |
586 | R>C | Variant assessed as Somatic; 0.0001458 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA1389035 rs762612532 |
586 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA1389033 rs770077123 |
587 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA1389031 rs781411616 |
588 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA1389030 rs771615930 |
589 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
CA1389028 rs202159391 |
590 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 591 | S>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1237984886 CA344811251 |
592 | G>D | No |
ClinGen gnomAD |
|
|
CA1389026 rs144384423 |
592 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1309376282 CA344811248 |
593 | S>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 594 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1385335735 CA344811236 |
594 | S>I | No |
ClinGen gnomAD |
|
|
rs749989636 CA1389023 |
595 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA1389021 rs761776001 |
596 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs762812924 CA1389019 |
598 | V>E | No |
ClinGen ExAC gnomAD |
|
|
rs762812924 CA1389018 |
598 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs766640481 CA37361850 |
600 | R>Q | No |
ClinGen gnomAD |
|
|
CA1389017 rs775147296 |
600 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA1389016 rs770203527 |
601 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1571963650 CA344811192 |
602 | V>G | No |
ClinGen Ensembl |
|
|
rs1056162245 CA37361826 |
602 | V>M | No |
ClinGen Ensembl |
|
|
rs759810971 CA1389015 |
603 | Q>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1571963644 CA344811180 |
604 | L>P | No |
ClinGen Ensembl |
|
|
rs771168517 CA1389013 |
605 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA1389011 rs778355430 |
606 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1406386933 CA344811162 |
607 | K>N | No |
ClinGen TOPMed |
|
|
rs1571963620 CA344811160 |
608 | T>P | No |
ClinGen Ensembl |
|
|
rs1262323276 CA344811153 |
609 | F>L | No |
ClinGen gnomAD |
|
|
CA344811113 rs1347498179 |
614 | S>P | No |
ClinGen gnomAD |
|
|
CA1389010 rs556662605 |
615 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA37361794 rs868334488 |
615 | P>S | No |
ClinGen Ensembl |
|
|
rs755809821 CA1389007 |
616 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs779235554 CA344811103 |
616 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779235554 CA1389008 |
616 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 618 | H>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344811088 rs1571963584 |
618 | H>Q | No |
ClinGen Ensembl |
|
|
rs1387553674 CA344811082 |
619 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1558078298 CA344811074 |
620 | S>C | No |
ClinGen Ensembl |
|
|
rs1044017722 CA37361762 |
622 | Q>K | No |
ClinGen Ensembl |
|
|
rs780781348 CA1389005 |
624 | V>E | No |
ClinGen ExAC gnomAD |
|
|
rs780781348 CA344811047 |
624 | V>G | No |
ClinGen ExAC gnomAD |
|
|
COSM1491964 CA37361734 rs775645066 |
625 | S>I | kidney Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs756811859 CA1389004 |
625 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs762664405 COSM903709 CA1389002 |
626 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA1389001 rs762790330 |
627 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1419386626 CA344811027 |
628 | L>V | No |
ClinGen gnomAD |
|
|
rs892287516 CA37361661 |
629 | T>A | No |
ClinGen Ensembl |
|
|
rs139407701 COSM1581555 RCV000946554 CA1389000 |
629 | T>M | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA344811018 rs1447826036 |
630 | A>T | No |
ClinGen TOPMed |
|
|
rs759366574 CA1388998 |
630 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA344811009 rs777016106 |
631 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1388997 rs777016106 |
631 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772692361 CA1388993 |
635 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1388992 rs748577702 |
640 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1388991 RCV001172300 rs774735121 |
640 | R>H | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA37361599 rs769036790 |
641 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1489907783 CA344810945 |
641 | H>Y | No |
ClinGen gnomAD |
|
|
CA1388989 rs749603756 |
642 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA1388987 rs756858196 |
643 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1297980924 CA344810928 |
644 | E>K | No |
ClinGen TOPMed |
|
|
rs746591836 CA344810921 |
645 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs746591836 CA1388986 |
645 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA37361587 rs944471557 |
646 | M>T | No |
ClinGen TOPMed |
|
| TCGA novel | 647 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA37361582 rs868805208 |
647 | N>S | No |
ClinGen Ensembl |
|
|
rs777129809 CA1388985 |
648 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA1388984 rs758401651 |
648 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA37361548 rs976083061 |
649 | M>I | No |
ClinGen gnomAD |
|
|
rs752713837 CA1388983 |
649 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs765218938 CA1388982 |
650 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765218938 CA344810887 |
650 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344810881 rs565634580 |
651 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1388981 rs565634580 |
651 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA37361539 rs200192378 |
651 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA344810880 rs1341567282 |
652 | G>S | No |
ClinGen gnomAD |
|
|
CA344810870 rs753618746 |
653 | M>R | No |
ClinGen ExAC gnomAD |
|
|
CA1388980 rs753618746 |
653 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs766772565 CA1388979 |
654 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs1233238785 CA344810866 |
654 | E>K | No |
ClinGen gnomAD |
|
|
rs760793358 CA344810858 |
655 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs760793358 CA1388978 |
655 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs373320359 CA1388977 |
655 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs369869120 CA344810854 |
656 | M>L | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs369869120 CA37361520 |
656 | M>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1558078134 CA344810846 |
657 | T>A | No |
ClinGen Ensembl |
|
|
rs547427299 CA1388976 |
657 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs749722298 CA1388972 |
659 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs528924376 CA1388971 |
660 | S>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1254162346 CA344810815 |
662 | H>R | No |
ClinGen TOPMed |
|
|
CA1388968 rs777442532 |
662 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs757869300 CA1388967 |
663 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA344810811 rs757869300 |
663 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs1439589183 CA344810805 |
664 | P>S | No |
ClinGen gnomAD |
|
|
rs985436736 CA37361466 |
665 | M>V | No |
ClinGen gnomAD |
|
|
CA1388966 rs200868628 |
667 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200868628 CA344810785 |
667 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs754960996 CA1388965 |
667 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA1388964 rs754960996 |
667 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA37361450 rs754960996 |
667 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000891920 CA1388963 rs61749334 |
668 | R>C | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs779691111 CA1388962 |
668 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344810779 rs1278538933 |
669 | N>D | No |
ClinGen gnomAD |
|
|
CA1388961 rs143968043 COSM903706 |
670 | T>M | endometrium [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA344810769 rs143968043 |
670 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs767726553 CA1388959 |
671 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344810761 rs1336851908 |
672 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs751637510 COSM1222530 CA1388957 |
672 | R>W | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA344810756 rs1354524203 |
673 | E>K | No |
ClinGen gnomAD |
|
|
rs764646234 CA1388956 |
674 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs202055949 CA1388955 COSM414633 |
676 | P>L | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 678 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759897774 CA1388952 |
678 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA37361394 rs759897774 |
678 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA1388951 rs772754750 |
679 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1388950 rs771691051 |
680 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA344810662 rs1255397509 |
681 | S>A | No |
ClinGen gnomAD |
|
|
rs747725344 CA1388949 |
681 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1388948 rs778551901 |
682 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs768762207 CA1388947 |
683 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA344810575 rs1571963242 |
686 | V>G | No |
ClinGen Ensembl |
|
|
CA1388945 rs138971900 |
687 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1011249150 CA37361346 |
688 | Q>E | No |
ClinGen Ensembl |
|
|
rs1300824699 CA344810538 |
689 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1232841362 CA344810531 |
689 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA1388944 rs545645883 |
690 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 690 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA37361310 rs143056223 |
692 | Y>C | No |
ClinGen ESP TOPMed |
|
|
rs572017024 CA344810466 |
693 | H>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA344810469 rs1251688648 |
693 | H>R | No |
ClinGen TOPMed |
|
|
rs757459160 CA1388941 |
694 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1388939 rs751690709 |
697 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1479604887 CA344810380 |
698 | F>L | No |
ClinGen gnomAD |
|
| TCGA novel | 700 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344810341 rs1431693566 |
701 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs764131218 CA37361280 |
702 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764131218 CA1388938 |
702 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762984047 CA1388937 |
703 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs933813511 CA37361278 |
703 | M>V | No |
ClinGen Ensembl |
|
|
CA1388936 rs753166242 |
706 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1388934 rs201586556 |
709 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA344810211 rs1218314180 |
710 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA344810205 CA344810206 rs1484899074 |
710 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA344810208 rs1218314180 |
710 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
CA1388933 rs777047210 |
712 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA1388930 rs372601623 |
715 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV000974173 rs143136196 |
715 | E>missing | No |
ClinVar dbSNP |
|
|
rs372601623 CA1388931 |
715 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs189081489 CA1388929 |
716 | E>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA344810158 rs1345066769 |
717 | A>S | No |
ClinGen TOPMed |
|
|
CA1388924 rs748755830 COSM138274 |
720 | S>L | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs748755830 CA344810137 |
720 | S>W | No |
ClinGen ExAC gnomAD |
|
|
rs1435611997 CA344810127 |
722 | P>S | No |
ClinGen gnomAD |
|
|
CA344810117 rs375220888 |
723 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781022020 CA1388920 |
723 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1571963087 CA344810109 |
725 | P>T | No |
ClinGen Ensembl |
|
| TCGA novel | 726 | M>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1388917 rs146577020 |
726 | M>T | No |
ClinGen ESP ExAC gnomAD |
|
|
CA1388918 rs556364374 |
726 | M>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 727 | L>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 727 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1388914 rs142125075 |
728 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1388913 rs142125075 |
728 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1388915 rs143375730 |
728 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA344810085 rs1485834480 |
729 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA344810088 rs1186746968 |
729 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA344810076 rs1257234493 |
730 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1373533874 CA344810068 |
731 | M>K | No |
ClinGen TOPMed |
|
|
rs147616478 CA1388912 |
731 | M>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs972256931 CA37361157 |
733 | Y>D | No |
ClinGen TOPMed gnomAD |
|
|
CA1388911 rs766818511 |
736 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344810022 rs1364777051 |
738 | Q>E | No |
ClinGen TOPMed |
|
|
rs1353293080 CA344810015 |
739 | A>T | No |
ClinGen gnomAD |
|
|
rs774165865 CA1388909 |
739 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344810009 rs34161375 |
740 | A>S | No |
ClinGen gnomAD |
|
|
CA37361149 rs34161375 |
740 | A>T | No |
ClinGen gnomAD |
|
|
rs1558077775 CA344810006 |
740 | A>V | No |
ClinGen Ensembl |
|
|
CA344809998 rs1213994624 |
742 | A>S | No |
ClinGen TOPMed |
|
|
rs762371599 CA1388907 |
742 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775058753 CA1388906 |
743 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1388905 rs769671708 |
743 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1291496442 CA344809991 |
744 | I>L | No |
ClinGen TOPMed |
|
|
rs1270505933 CA344809973 |
746 | N>K | No |
ClinGen TOPMed |
|
|
CA1388904 rs745790629 |
746 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1388902 rs370626715 |
749 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs370626715 CA37361087 |
749 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs139475051 CA344809927 |
753 | P>L | No |
ClinGen ESP gnomAD |
|
|
rs139475051 CA37361039 |
753 | P>R | No |
ClinGen ESP gnomAD |
|
|
rs184270548 CA1388896 |
754 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs184270548 CA1388895 |
754 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs766943271 CA1388894 COSM1581554 |
759 | V>M | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1165249502 CA344809887 |
760 | S>G | No |
ClinGen TOPMed |
|
|
rs1214646133 CA344809873 |
761 | N>K | No |
ClinGen gnomAD |
|
|
CA1388893 rs144047168 |
762 | G>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs368227298 CA344809864 |
763 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1388892 COSM314579 rs368227298 |
763 | A>V | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA344809846 rs1323318041 |
766 | Q>R | No |
ClinGen gnomAD |
|
|
CA344809833 rs1364250545 |
768 | Q>E | No |
ClinGen TOPMed |
|
|
CA344809823 rs1305075417 |
769 | A>D | No |
ClinGen gnomAD |
|
|
rs763904657 CA344809816 |
770 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs763904657 CA1388890 |
770 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs1300040481 CA344809809 |
771 | L>P | No |
ClinGen gnomAD |
|
|
CA37360963 rs901003984 |
772 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA1388889 rs762646658 |
773 | P>S | No |
ClinGen ExAC gnomAD |
|
|
COSM1639718 CA1388887 rs764835617 |
774 | A>T | stomach [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1248569738 CA344809793 |
774 | A>V | No |
ClinGen TOPMed |
|
|
rs139248712 CA1388885 |
775 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs758922685 CA1388886 |
775 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344809784 rs1418212072 |
776 | A>T | No |
ClinGen gnomAD |
|
|
CA1388884 rs770792704 |
779 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA37360881 rs771988073 |
780 | V>L | No |
ClinGen Ensembl |
|
|
CA344809760 rs771988073 |
780 | V>M | No |
ClinGen Ensembl |
|
|
rs1242190716 CA344809752 |
781 | L>P | No |
ClinGen TOPMed |
|
|
rs1486596886 CA344809748 |
782 | R>K | No |
ClinGen TOPMed |
|
|
CA1388879 rs148160825 |
787 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs768799840 CA1388878 |
788 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs749525633 CA1388877 |
789 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA37360792 rs930650455 |
791 | M>I | No |
ClinGen Ensembl |
|
|
CA344809676 rs1311759997 |
793 | R>Q | No |
ClinGen gnomAD |
|
|
rs780710386 CA1388876 |
793 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1232099200 CA344809656 |
796 | P>L | No |
ClinGen gnomAD |
|
|
CA1388874 rs146466456 COSM1658952 |
797 | P>L | salivary_gland [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1571962786 CA344809637 |
799 | V>G | No |
ClinGen Ensembl |
|
|
rs563897292 CA1388872 |
800 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs142432691 CA1388870 |
801 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs759094686 CA1388869 |
802 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs759094686 CA344809624 |
802 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA344809615 rs1160118206 |
803 | S>C | No |
ClinGen gnomAD |
|
|
CA344809618 rs1336197428 |
803 | S>P | No |
ClinGen TOPMed |
|
|
CA344809607 rs146980027 |
805 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1388867 rs146980027 |
805 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 807 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1388866 rs551943170 |
808 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA344809564 rs1204270584 |
812 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA344809537 rs1209052383 |
816 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1347197734 CA344809524 |
817 | K>N | No |
ClinGen gnomAD |
|
| TCGA novel | 818 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1358114553 CA344809513 |
819 | R>Q | No |
ClinGen gnomAD |
|
|
rs1216793547 CA344809514 |
819 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA344809509 rs1185410492 |
820 | V>I | No |
ClinGen TOPMed |
|
|
CA37360746 rs1041780703 |
821 | K>R | No |
ClinGen TOPMed |
|
| TCGA novel | 829 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1236049129 CA344809440 |
830 | V>M | No |
ClinGen gnomAD |
|
|
CA37360723 rs781111731 |
831 | S>C | No |
ClinGen Ensembl |
|
|
CA1388860 rs372567962 |
833 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1030908546 CA37360700 |
835 | S>F | No |
ClinGen TOPMed |
|
|
rs201433939 CA1388857 |
839 | S>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1388856 rs781746617 |
839 | S>N | No |
ClinGen ExAC |
|
|
CA37360687 rs939504113 |
842 | E>Q | No |
ClinGen TOPMed |
|
|
CA344809349 rs1374318617 |
843 | R>T | No |
ClinGen gnomAD |
|
| TCGA novel | 844 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344809332 rs1327503875 |
845 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
| TCGA novel | 845 | M>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA37360666 rs559991957 |
845 | M>V | No |
ClinGen 1000Genomes gnomAD |
|
|
CA1388854 rs751808404 |
846 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs542139540 CA1388855 |
846 | M>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1388853 rs778698442 |
847 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777200331 CA1388837 |
849 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA344808896 rs1445205577 |
852 | K>* | No |
ClinGen Ensembl |
|
|
rs771341494 CA1388836 |
852 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1025998326 CA344808866 |
856 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1025998326 CA37357079 |
856 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs72757962 CA1388834 |
857 | G>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs139365653 CA1388833 |
858 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200455156 CA1388832 |
860 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1054872580 CA37357052 |
860 | A>V | No |
ClinGen TOPMed |
|
|
rs779629858 CA1388831 |
863 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA344808813 rs1414320140 |
864 | P>L | No |
ClinGen gnomAD |
|
|
CA344808800 rs1182547580 |
866 | M>I | No |
ClinGen gnomAD |
|
|
rs148810458 CA344808806 |
866 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344808804 rs1571959521 |
866 | M>T | No |
ClinGen Ensembl |
|
|
CA1388828 rs148810458 |
866 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344808799 rs1459149729 |
867 | L>M | No |
ClinGen gnomAD |
|
|
CA344808789 rs1294302453 |
868 | A>V | No |
ClinGen TOPMed |
|
|
CA344808786 rs1341049490 |
869 | A>T | No |
ClinGen TOPMed |
|
|
CA344808774 rs757127651 |
870 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs751417115 CA37357013 |
871 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1388826 rs751417115 |
871 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763829335 CA1388825 |
874 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs76763910 RCV000974884 CA1388823 |
877 | R>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs765489245 CA1388822 |
878 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA37356993 rs1011637263 |
881 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
COSM532346 CA1388820 rs533330548 |
881 | R>W | lung Variant assessed as Somatic; 0.0 impact. haematopoietic_and_lymphoid_tissue [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1571959465 CA344808709 |
882 | E>G | No |
ClinGen Ensembl |
|
|
rs771521435 CA1388819 COSM1338734 |
883 | E>D | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs747445272 CA1388818 |
884 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs1384446244 CA344808691 |
885 | R>G | No |
ClinGen gnomAD |
|
|
rs1159511148 CA344808689 |
885 | R>Q | No |
ClinGen gnomAD |
|
|
CA1388817 rs147068151 |
886 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344808682 rs147068151 |
886 | V>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs772445868 CA1388816 |
887 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs748450471 CA1388815 |
887 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA1388814 rs779681455 |
888 | A>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 888 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1214005990 CA344808653 |
889 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1283057526 COSM228295 CA344808647 |
890 | R>Q | skin [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA1388813 rs544479567 |
890 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344808640 rs1216946328 |
891 | V>F | No |
ClinGen gnomAD |
|
|
CA344808635 rs1571959416 |
891 | V>G | No |
ClinGen Ensembl |
|
|
rs1451262310 CA344808630 |
892 | P>L | No |
ClinGen TOPMed |
|
|
CA344808631 rs1355186250 |
892 | P>S | No |
ClinGen gnomAD |
|
|
CA344808625 rs1277657787 |
893 | M>V | No |
ClinGen gnomAD |
|
|
CA344808604 rs1233458272 |
894 | D>G | No |
ClinGen gnomAD |
|
|
rs757257903 CA1388810 |
896 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs751476579 CA1388809 |
896 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762232048 CA1388797 |
897 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA1388795 rs769484147 |
899 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1345072590 CA344807926 |
900 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA1388794 rs745478396 |
903 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA1388793 rs767917870 |
906 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770362311 CA1388792 |
908 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs560225632 CA37356462 CA1388788 |
914 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1388789 rs758400720 |
914 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA37356459 rs376127067 |
915 | Q>E | No |
ClinGen ESP TOPMed |
|
| TCGA novel | 918 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344807674 rs1245568133 |
918 | K>Q | No |
ClinGen TOPMed |
|
|
CA1388787 rs138595241 |
920 | K>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 920 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs766563310 CA1388785 |
921 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344807600 rs766563310 |
921 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1388786 rs754766309 |
921 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA1388784 rs766563310 COSM903705 |
921 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 922 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs80056850 CA1388780 |
924 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs774735470 CA1388779 |
927 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344807416 rs1229153775 |
929 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA344807318 rs746558501 |
934 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1388774 COSM463918 rs746558501 |
934 | A>T | kidney [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1558074769 CA344807300 |
935 | E>K | No |
ClinGen Ensembl |
|
|
CA1388772 rs772180365 |
938 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 938 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1388770 rs778948538 |
940 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs962347314 CA344806988 |
949 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs753599035 CA1388768 |
953 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs930626345 CA37356445 |
956 | K>R | No |
ClinGen TOPMed |
|
| TCGA novel | 957 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344806748 rs1438568948 |
959 | N>K | No |
ClinGen gnomAD |
|
|
rs750551556 CA1388765 |
960 | T>K | No |
ClinGen ExAC gnomAD |
|
|
rs1433260693 CA344806607 |
968 | I>V | No |
ClinGen gnomAD |
|
|
rs1558074733 CA344806565 |
969 | K>N | No |
ClinGen Ensembl |
|
| TCGA novel | 970 | V>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1388746 rs781341196 |
970 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs964391980 CA37356102 |
974 | G>E | No |
ClinGen Ensembl |
|
|
CA1388742 rs576230455 |
974 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 977 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344805958 rs1360603374 |
977 | W>R | No |
ClinGen gnomAD |
|
|
CA344805915 rs1159864268 |
978 | H>R | No |
ClinGen gnomAD |
|
| TCGA novel | 980 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1432342839 CA344805880 |
980 | I>V | No |
ClinGen gnomAD |
|
|
CA344805854 rs1571956350 |
982 | T>P | No |
ClinGen Ensembl |
|
| TCGA novel | 986 | L>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1388741 rs753047399 |
987 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1388739 rs759933226 |
988 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344805734 rs1193197006 |
990 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1193197006 CA344805735 |
990 | C>S | No |
ClinGen TOPMed gnomAD |
|
|
CA344805729 rs1571956325 |
990 | C>Y | No |
ClinGen Ensembl |
|
|
CA1388737 rs767208922 |
991 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA37356101 rs761473412 |
991 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA344805691 rs1270134770 |
992 | D>E | No |
ClinGen TOPMed |
|
| TCGA novel | 992 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1208762934 CA344805632 |
997 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA344805620 rs1238492148 |
998 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
| TCGA novel | 1000 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1388735 rs773895507 |
1001 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344805593 rs1571956289 |
1002 | V>G | No |
ClinGen Ensembl |
|
|
CA344805596 rs1236135978 |
1002 | V>M | No |
ClinGen gnomAD |
|
|
CA1388733 rs749217187 |
1003 | N>I | No |
ClinGen ExAC gnomAD |
|
|
CA37356099 rs560035646 |
1006 | A>S | No |
ClinGen 1000Genomes |
|
|
COSM209867 CA344805566 rs1400998275 |
1006 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA344805559 rs1340684886 |
1007 | M>I | No |
ClinGen gnomAD |
|
| TCGA novel | 1008 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA37356098 rs141008927 |
1008 | V>F | No |
ClinGen ESP gnomAD |
|
|
rs1393748975 CA344805552 |
1008 | V>G | No |
ClinGen gnomAD |
|
|
CA1388732 rs775249327 |
1009 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769652266 CA1388731 |
1010 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344805521 rs1467572884 |
1011 | E>G | No |
ClinGen gnomAD |
|
|
CA1388714 rs775509122 |
1013 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs971817654 CA37355747 |
1016 | R>* | No |
ClinGen TOPMed |
|
|
rs201803310 CA1388712 |
1016 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA1388711 rs776388847 |
1018 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1189640764 CA344803935 |
1019 | S>I | No |
ClinGen gnomAD |
|
|
CA344803930 rs1405764874 COSM3803840 |
1019 | S>R | breast [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs1571954507 CA344803925 |
1020 | H>Y | No |
ClinGen Ensembl |
|
|
COSM209865 rs771183448 CA1388710 |
1021 | R>* | large_intestine Variant assessed as Somatic; 4.619e-05 impact. breast [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA1388709 rs202097883 |
1021 | R>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
CA344803882 rs1459351333 |
1022 | Y>* | No |
ClinGen gnomAD |
|
|
rs777814014 CA1388708 |
1023 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344803830 rs1355125383 |
1025 | K>R | No |
ClinGen gnomAD |
|
|
rs748113622 CA1388706 |
1028 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1030 | H>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1374071876 CA344803757 |
1030 | H>D | No |
ClinGen gnomAD |
|
|
CA1388705 rs779536759 |
1035 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
CA344803595 rs1321263831 |
1038 | F>L | No |
ClinGen gnomAD |
|
|
CA344803606 rs1402194816 |
1038 | F>V | No |
ClinGen gnomAD |
|
|
rs1450362997 CA344803549 |
1041 | T>A | No |
ClinGen TOPMed |
|
|
CA1388703 COSM1317578 rs540376362 |
1042 | T>M | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA37355742 rs376950645 |
1043 | K>N | No |
ClinGen ESP TOPMed |
|
|
rs1165252547 CA344803472 |
1044 | F>L | No |
ClinGen gnomAD |
|
|
rs1357611465 CA344803482 |
1044 | F>Y | No |
ClinGen Ensembl |
|
|
CA1388700 rs181559516 |
1045 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM903700 rs181559516 CA1388701 |
1045 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
COSM390010 rs61749333 CA1388699 |
1046 | T>R | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA344803404 rs1211672225 |
1048 | S>F | No |
ClinGen TOPMed |
|
| TCGA novel | 1048 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1251684128 CA344803343 |
1051 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs368355982 CA1388696 |
1051 | Y>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344803354 rs368355982 |
1051 | Y>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344803347 rs1251684128 |
1051 | Y>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 1052 | A>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344803307 rs1452412459 |
1053 | T>A | No |
ClinGen TOPMed |
|
|
CA1388694 rs189546585 |
1054 | T>M | Variant assessed as Somatic; 0.0003234 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA344803287 rs189546585 |
1054 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA344803291 rs1198526875 |
1054 | T>S | No |
ClinGen gnomAD |
|
| TCGA novel | 1055 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1388691 rs372859181 |
1057 | K>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1240248993 CA344803252 |
1058 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs199690849 CA37355741 |
1060 | H>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA |
|
rs779111878 CA1388688 |
1065 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs148337405 CA1388687 |
1068 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1388685 rs780657216 |
1069 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1558071918 CA344803135 |
1069 | V>L | No |
ClinGen Ensembl |
|
| TCGA novel | 1070 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1071 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344803104 rs1359973791 |
1073 | Q>R | No |
ClinGen gnomAD |
|
|
rs1421603645 CA344803099 |
1074 | Y>H | No |
ClinGen gnomAD |
|
|
CA1388682 rs149517226 |
1075 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 1076 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1478550030 CA344803084 |
1076 | D>N | No |
ClinGen gnomAD |
|
|
CA344803004 rs1201132785 |
1081 | G>C | No |
ClinGen gnomAD |
|
|
rs1220551409 CA344803001 |
1081 | G>D | No |
ClinGen TOPMed |
|
|
CA344803007 rs1201132785 |
1081 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs752293668 CA1388680 |
1082 | C>S | No |
ClinGen ExAC |
|
|
CA1388679 rs145574929 |
1083 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1135352 CA344802957 |
1084 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1198717289 CA344802948 |
1085 | D>A | No |
ClinGen TOPMed |
|
|
CA1388676 rs753788551 |
1086 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs766241154 CA1388675 |
1090 | L>I | No |
ClinGen ExAC gnomAD |
|
|
CA1388653 rs753345462 |
1096 | I>S | No |
ClinGen ExAC gnomAD |
|
|
CA344812280 rs1571951497 |
1097 | Q>R | No |
ClinGen Ensembl |
|
|
CA344812258 rs758241410 |
1098 | S>* | No |
ClinGen TOPMed gnomAD |
|
|
CA37405537 rs758241410 |
1098 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1048433844 CA37405533 |
1099 | V>I | No |
ClinGen TOPMed |
|
|
rs755979033 COSM903699 CA1388651 |
1100 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs140773516 CA1388650 |
1100 | R>H | No |
ClinGen ESP ExAC TOPMed |
|
|
CA37405522 rs140946472 |
1101 | R>C | No |
ClinGen ESP TOPMed |
|
|
rs767244490 CA1388649 |
1104 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA344812108 rs1175111317 |
1107 | L>R | No |
ClinGen TOPMed |
|
|
CA344812112 rs1433350645 |
1107 | L>V | No |
ClinGen TOPMed |
|
|
CA344812061 rs1401546369 |
1110 | T>I | No |
ClinGen gnomAD |
|
|
rs774726422 CA1388647 |
1111 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA37405509 rs1018710626 |
1113 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA1388646 rs144677892 |
1113 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1388645 rs535295573 |
1114 | H>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
COSM1581553 CA1388644 rs200340171 RCV000890231 |
1115 | P>L | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA37405500 rs944070909 |
1115 | P>S | No |
ClinGen TOPMed |
|
|
rs1457134890 CA344811993 |
1117 | I>L | No |
ClinGen gnomAD |
|
|
rs777149165 CA344811982 |
1117 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1388640 rs771216709 |
1120 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA1388635 rs779395805 |
1130 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA344811780 rs150646672 |
1135 | E>* | No |
ClinGen ESP ExAC gnomAD |
|
|
CA1388633 rs150646672 |
1135 | E>K | No |
ClinGen ESP ExAC gnomAD |
|
|
CA344811757 rs1347700850 |
1137 | M>V | No |
ClinGen gnomAD |
|
| TCGA novel | 1138 | I>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1138 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781124543 CA1388632 |
1139 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA37405443 rs888807226 |
1140 | C>R | No |
ClinGen Ensembl |
|
|
rs180859430 CA1388631 |
1140 | C>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs751395433 CA1388630 |
1143 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344811669 rs1438939017 |
1144 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1178678823 COSM903698 CA344811658 |
1145 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA1388612 rs751440587 |
1147 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777741752 CA1388611 |
1151 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA344810629 rs1290548094 |
1154 | R>K | No |
ClinGen gnomAD |
|
|
CA1388609 rs371555244 |
1157 | R>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1481308197 CA344810536 |
1161 | M>I | No |
ClinGen gnomAD |
|
|
CA37400130 rs200052285 |
1163 | M>L | No |
ClinGen Ensembl |
|
|
CA37400125 rs200052285 |
1163 | M>V | No |
ClinGen Ensembl |
|
|
CA344810507 rs1421703565 |
1164 | I>V | No |
ClinGen gnomAD |
|
|
rs376050971 CA1388607 |
1165 | Q>E | No |
ClinGen ESP ExAC gnomAD |
|
|
rs138031903 CA1388606 |
1167 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344810474 rs1488643373 |
1167 | I>V | No |
ClinGen gnomAD |
|
|
rs761135915 CA1388604 |
1168 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA37400105 rs766848166 |
1168 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs766848166 CA1388605 |
1168 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1198183278 CA344810453 |
1169 | Q>* | No |
ClinGen TOPMed |
|
|
CA344810438 rs1205932195 |
1170 | Y>C | No |
ClinGen gnomAD |
|
|
CA344810428 rs1316490710 |
1171 | K>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1316490710 CA344810430 |
1171 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA344810426 rs1275887772 |
1171 | K>R | No |
ClinGen gnomAD |
|
|
CA37400092 rs138007137 |
1174 | Y>H | No |
ClinGen 1000Genomes |
|
|
CA344810356 rs1418794092 |
1176 | V>A | No |
ClinGen TOPMed |
|
|
CA1388599 rs769480962 |
1178 | I>F | No |
ClinGen ExAC gnomAD |
|
|
CA37400045 rs981613514 |
1179 | Q>R | No |
ClinGen Ensembl |
|
|
CA344810316 rs1337344427 TCGA novel |
1180 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen gnomAD NCI-TCGA |
|
CA1388598 rs745426839 |
1182 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1397902221 CA344810257 |
1184 | S>A | No |
ClinGen gnomAD |
|
| TCGA novel | 1185 | R>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA37400017 rs368969626 |
1186 | L>F | No |
ClinGen ESP |
2 associated diseases with Q15678
[MIM: 613611]: Choanal atresia and lymphedema (CATLPH)
A disease characterized by posterior choanal atresia and lymphedema. Additional features are a high-arched palate, hypoplastic nipples, and mild pectus excavatum. {ECO:0000269|PubMed:20826270}. Note=The disease is caused by variants affecting the gene represented in this entry. A homozygous deletion in PTPN14 predicted to result in frameshift and premature truncation, has been shown to be the cause of choanal atresia and lymphedema in one family.
Without disease ID
- A disease characterized by posterior choanal atresia and lymphedema. Additional features are a high-arched palate, hypoplastic nipples, and mild pectus excavatum. {ECO:0000269|PubMed:20826270}. Note=The disease is caused by variants affecting the gene represented in this entry. A homozygous deletion in PTPN14 predicted to result in frameshift and premature truncation, has been shown to be the cause of choanal atresia and lymphedema in one family.
12 regional properties for Q15678
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Tyrosine-specific protein phosphatase, PTPase domain | 908 - 1182 | IPR000242 |
| domain | FERM domain | 21 - 306 | IPR000299 |
| domain | Tyrosine-specific protein phosphatases domain | 1090 - 1171 | IPR000387 |
| domain | Protein-tyrosine phosphatase, catalytic | 1068 - 1179 | IPR003595 |
| active_site | Protein-tyrosine phosphatase, active site | 1119 - 1129 | IPR016130 |
| domain | FERM, N-terminal | 25 - 87 | IPR018979 |
| domain | FERM, C-terminal PH-like domain | 224 - 310 | IPR018980 |
| conserved_site | FERM conserved site | 75 - 105 | IPR019747-1 |
| conserved_site | FERM conserved site | 190 - 219 | IPR019747-2 |
| domain | FERM central domain | 106 - 220 | IPR019748 |
| domain | Band 4.1 domain | 17 - 220 | IPR019749 |
| domain | PTPN14/21, FERM domain C-lobe | 215 - 305 | IPR041782 |
Functions
| Description | ||
|---|---|---|
| EC Number | 3.1.3.48 | Phosphoric monoester hydrolases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytoskeleton | A cellular structure that forms the internal framework of eukaryotic and prokaryotic cells. The cytoskeleton includes intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| protein tyrosine phosphatase activity | Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate. |
| receptor tyrosine kinase binding | Binding to a receptor that possesses protein tyrosine kinase activity. |
| transcription coregulator activity | A transcription regulator activity that modulates the transcription of specific gene sets via binding to a DNA-bound DNA-binding transcription factor, either on its own or as part of a complex. Coregulators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| lymphangiogenesis | Lymph vessel formation when new vessels emerge from the proliferation of pre-existing vessels. |
| negative regulation of cell population proliferation | Any process that stops, prevents or reduces the rate or extent of cell proliferation. |
| protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
| regulation of protein export from nucleus | Any process that modulates the frequency, rate or extent of the directed movement of proteins from the nucleus to the cytoplasm. |
3 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P29074 | PTPN4 | Tyrosine-protein phosphatase non-receptor type 4 | Homo sapiens (Human) | PR |
| P26045 | PTPN3 | Tyrosine-protein phosphatase non-receptor type 3 | Homo sapiens (Human) | PR |
| Q9WU22 | Ptpn4 | Tyrosine-protein phosphatase non-receptor type 4 | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MPFGLKLRRT | RRYNVLSKNC | FVTRIRLLDS | NVIECTLSVE | STGQECLEAV | AQRLELRETH |
| 70 | 80 | 90 | 100 | 110 | 120 |
| YFGLWFLSKS | QQARWVELEK | PLKKHLDKFA | NEPLLFFGVM | FYVPNVSWLQ | QEATRYQYYL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| QVKKDVLEGR | LRCTLDQVIR | LAGLAVQADF | GDYNQFDSQD | FLREYVLFPM | DLALEEAVLE |
| 190 | 200 | 210 | 220 | 230 | 240 |
| ELTQKVAQEH | KAHSGILPAE | AELMYINEVE | RLDGFGQEIF | PVKDNHGNCV | HLGIFFMGIF |
| 250 | 260 | 270 | 280 | 290 | 300 |
| VRNRIGRQAV | IYRWNDMGNI | THNKSTILVE | LINKEETALF | HTDDIENAKY | ISRLFATRHK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| FYKQNKICTE | QSNSPPPIRR | QPTWSRSSLP | RQQPYILPPV | HVQCGEHYSE | THTSQDSIFH |
| 370 | 380 | 390 | 400 | 410 | 420 |
| GNEEALYCNS | HNSLDLNYLN | GTVTNGSVCS | VHSVNSLNCS | QSFIQASPVS | SNLSIPGSDI |
| 430 | 440 | 450 | 460 | 470 | 480 |
| MRADYIPSHR | HSAIIVPSYR | PTPDYETVMR | QMKRGILHTD | SQSQSLRNLN | IINTHAYNQP |
| 490 | 500 | 510 | 520 | 530 | 540 |
| EDLVYSQPEM | RERHPYTVPY | GPQGVYSNKL | VSPSDQRNPK | NNVVPSKPGA | SAISHTVSTP |
| 550 | 560 | 570 | 580 | 590 | 600 |
| ELANMQLQGS | HNYSTAHMLK | NYLFRPPPPY | PRPRPATSTP | DLASHRHKYV | SGSSPDLVTR |
| 610 | 620 | 630 | 640 | 650 | 660 |
| KVQLSVKTFQ | EDSSPVVHQS | LQEVSEPLTA | TKHHGTVNKR | HSLEVMNSMV | RGMEAMTLKS |
| 670 | 680 | 690 | 700 | 710 | 720 |
| LHLPMARRNT | LREQGPPEEG | SGSHEVPQLP | QYHHKKTFSD | ATMLIHSSES | EEEEEEAPES |
| 730 | 740 | 750 | 760 | 770 | 780 |
| VPQIPMLREK | MEYSAQLQAA | LARIPNKPPP | EYPGPRKSVS | NGALRQDQAS | LPPAMARARV |
| 790 | 800 | 810 | 820 | 830 | 840 |
| LRHGPAKAIS | MSRTDPPAVN | GASLGPSISE | PDLTSVKERV | KKEPVKERPV | SEMFSLEDSI |
| 850 | 860 | 870 | 880 | 890 | 900 |
| IEREMMIRNL | EKQKMAGLEA | QKRPLMLAAL | NGLSVARVSG | REENRVDATR | VPMDERFRTL |
| 910 | 920 | 930 | 940 | 950 | 960 |
| KKKLEEGMVF | TEYEQIPKKK | ANGIFSTAAL | PENAERSRIR | EVVPYEENRV | ELIPTKENNT |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| GYINASHIKV | VVGGAEWHYI | ATQGPLPHTC | HDFWQMVWEQ | GVNVIAMVTA | EEEGGRTKSH |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| RYWPKLGSKH | SSATYGKFKV | TTKFRTDSVC | YATTGLKVKH | LLSGQERTVW | HLQYTDWPDH |
| 1090 | 1100 | 1110 | 1120 | 1130 | 1140 |
| GCPEDVQGFL | SYLEEIQSVR | RHTNSMLEGT | KNRHPPIVVH | CSAGVGRTGV | LILSELMIYC |
| 1150 | 1160 | 1170 | 1180 | ||
| LEHNEKVEVP | MMLRLLREQR | MFMIQTIAQY | KFVYQVLIQF | LQNSRLI |