P78410
Gene name |
BTN3A2 (BT3.2, BTF3, BTF4) |
Protein name |
Butyrophilin subfamily 3 member A2 |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:11118 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
2 structures for P78410
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 4F8Q | X-ray | 238 A | A | 30-239 | PDB |
| AF-P78410-F1 | Predicted | AlphaFoldDB |
294 variants for P78410
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| TCGA novel | 2 | K>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs535121781 CA136273666 |
3 | M>T | No |
ClinGen Ensembl |
|
|
CA136273667 rs547225553 |
4 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA TOPMed |
|
rs570507609 CA3671941 |
5 | S>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs539682398 CA3671942 |
6 | S>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs757449424 CA3671943 |
6 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
rs746420438 CA3671946 |
8 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA3671945 rs746420438 |
8 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA136273698 rs746420438 |
8 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA3671947 rs780484548 |
12 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1402663719 CA363219794 |
13 | N>D | No |
ClinGen TOPMed |
|
|
rs1269904577 CA363219801 |
14 | F>I | No |
ClinGen gnomAD |
|
|
CA363219817 rs1422849601 |
16 | V>I | No |
ClinGen TOPMed |
|
|
CA3671949 rs769004087 |
17 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778277908 CA3671951 |
19 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1406269370 CA363219851 |
21 | V>A | No |
ClinGen gnomAD |
|
|
CA3671954 rs759522232 |
26 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA363219878 rs1349462265 |
26 | P>T | No |
ClinGen gnomAD |
|
| TCGA novel | 28 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA363219949 rs1187738748 |
35 | G>R | No |
ClinGen gnomAD |
|
|
rs1456325093 CA363219957 |
36 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
| TCGA novel | 37 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs972561260 CA136274037 |
38 | G>W | No |
ClinGen Ensembl |
|
|
rs774421990 CA3671995 |
40 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs767313554 CA3671997 |
42 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs374368953 CA3671999 |
43 | M>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3671998 rs773355659 |
43 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1343331647 CA363220003 |
44 | V>M | No |
ClinGen gnomAD |
|
|
rs1290696331 CA363220009 |
45 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1001462666 CA136274072 |
45 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs766402794 CA3672000 |
47 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1561798942 CA363220029 |
48 | A>D | No |
ClinGen Ensembl |
|
|
CA3672001 rs753847600 |
48 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363220032 rs372205582 |
49 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3672002 rs372205582 |
49 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA363220074 rs1218649168 |
55 | F>S | No |
ClinGen gnomAD |
|
|
rs758725669 CA3672006 |
56 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672007 rs376536724 |
56 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376536724 CA363220082 |
56 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3672009 rs755728551 |
57 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755728551 CA136274120 |
57 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363220098 rs1480582623 |
59 | S>C | No |
ClinGen gnomAD |
|
|
CA3672010 rs779726695 |
60 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1402305144 CA363220110 |
61 | E>* | No |
ClinGen gnomAD |
|
|
rs748868645 CA3672011 |
62 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA3672013 rs779034411 |
63 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs541411264 CA3672012 |
63 | M>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA363220131 rs1301412314 |
64 | E>* | No |
ClinGen gnomAD |
|
|
rs748095952 CA3672014 |
64 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs748095952 CA363220132 |
64 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA3672015 rs771787001 |
65 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672016 rs773020583 |
65 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA363220144 rs1225920991 |
66 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1287398774 CA363220152 |
67 | W>* | No |
ClinGen gnomAD |
|
|
rs1219582805 TCGA novel CA363220168 |
69 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen gnomAD |
|
CA3672018 rs771125071 |
70 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs776820240 CA3672019 |
71 | S>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 73 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs925023730 CA136274163 |
76 | V>M | No |
ClinGen Ensembl |
|
|
rs1469926797 CA363220224 |
78 | V>A | No |
ClinGen TOPMed |
|
|
CA3672024 rs145878031 |
78 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA363220231 rs1161729004 |
79 | Y>F | No |
ClinGen gnomAD |
|
|
rs1367598172 CA363220234 |
80 | A>T | No |
ClinGen gnomAD |
|
|
CA363220239 rs1406105805 |
80 | A>V | No |
ClinGen gnomAD |
|
|
CA3672025 rs751895816 |
81 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363220251 rs1353075235 |
82 | G>A | No |
ClinGen gnomAD |
|
|
rs757552389 CA3672026 |
83 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA3672027 rs779922999 |
84 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA136274177 rs997671145 |
85 | V>L | No |
ClinGen Ensembl |
|
|
rs578036874 CA136274183 |
86 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA TOPMed |
|
rs578036874 CA363220273 |
86 | E>Q | No |
ClinGen 1000Genomes TOPMed |
|
|
rs1316531654 CA363220285 |
87 | D>E | No |
ClinGen gnomAD |
|
|
rs543524891 CA363220283 |
87 | D>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs543524891 CA3672029 |
87 | D>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201827341 CA3672030 |
88 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs748068774 CA3672031 CA363220306 |
90 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363220304 rs1194825007 |
90 | S>T | No |
ClinGen gnomAD |
|
|
CA363220310 rs1250961169 |
91 | A>E | No |
ClinGen gnomAD |
|
|
CA363220307 rs1208260539 |
91 | A>T | No |
ClinGen gnomAD |
|
|
rs369213232 CA3672032 |
92 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA363220322 rs1242356195 |
93 | Y>C | No |
ClinGen gnomAD |
|
|
CA363220327 rs1442694872 |
94 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
rs746878122 CA3672034 |
94 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3672035 rs770707141 |
97 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA3672036 rs776878011 |
98 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA363220354 rs1411915031 |
99 | I>V | No |
ClinGen gnomAD |
|
|
CA363220363 rs1380852542 |
100 | L>P | No |
ClinGen TOPMed |
|
|
rs775506261 CA3672040 |
101 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764723723 CA363220365 |
101 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672041 COSM1076760 rs764723723 |
101 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs775506261 CA3672039 |
101 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762282768 CA3672043 |
103 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672042 rs774720048 |
103 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1429374195 CA363220380 |
104 | I>V | No |
ClinGen TOPMed |
|
|
CA136274243 rs1007957335 |
105 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA363220417 rs754639112 |
110 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA3672046 rs754639112 |
110 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1341015922 CA363220423 |
111 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA3672048 rs752191656 |
112 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672049 rs757832428 |
112 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1212992505 CA363220437 |
113 | I>M | No |
ClinGen TOPMed |
|
|
CA363220432 rs1459821825 |
113 | I>V | No |
ClinGen gnomAD |
|
|
rs562706598 CA136274252 |
114 | H>P | No |
ClinGen 1000Genomes |
|
|
CA363220447 rs1457126626 |
115 | N>D | No |
ClinGen gnomAD |
|
|
COSM1076761 rs992030796 CA136274266 COSM1596202 |
116 | V>I | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1227436083 CA363220465 |
118 | A>P | No |
ClinGen TOPMed |
|
|
CA363220479 rs1356681175 |
120 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1371467936 CA363220476 |
120 | D>N | No |
ClinGen gnomAD |
|
|
CA3672052 rs757089345 |
122 | G>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 123 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs531494643 CA3672054 |
125 | L>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA363220529 rs1468596937 |
127 | Y>D | No |
ClinGen TOPMed gnomAD |
|
|
rs769933993 CA3672055 |
129 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs542187223 CA3672056 |
131 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 133 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3672057 rs749454929 |
134 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363220595 rs1374860576 |
136 | K>E | No |
ClinGen TOPMed |
|
|
CA136274289 rs1019757132 |
141 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
CA363220629 rs1321105724 |
141 | L>P | No |
ClinGen gnomAD |
|
|
rs1019757132 CA363220627 |
141 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA363220647 rs1256422710 |
144 | A>S | No |
ClinGen gnomAD |
|
|
rs1349855519 CA363220650 |
144 | A>V | No |
ClinGen gnomAD |
|
|
CA363220673 rs1184069448 |
147 | G>C | No |
ClinGen TOPMed |
|
|
CA363220672 rs1184069448 |
147 | G>S | No |
ClinGen TOPMed |
|
|
CA363220681 rs1489918540 |
148 | S>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3672072 COSM3697709 rs755902264 COSM3697710 |
149 | N>D | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs749453475 CA3672074 |
152 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672076 COSM1596201 COSM171372 rs774256825 |
153 | E>K | Variant assessed as Somatic; 4.623e-05 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs774256825 CA3672077 |
153 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1162367505 CA363220715 |
154 | V>M | No |
ClinGen gnomAD |
|
|
rs1241924995 CA363220725 |
155 | K>R | No |
ClinGen TOPMed |
|
|
CA3672078 rs772651006 |
156 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA363220731 rs1459062525 |
156 | G>V | No |
ClinGen gnomAD |
|
|
CA3672079 rs773839701 |
157 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA136274909 rs773839701 |
157 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672082 rs771167658 |
158 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775257006 CA3672083 |
160 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs186780460 CA136274928 |
161 | G>E | No |
ClinGen 1000Genomes |
|
|
rs1377536413 CA363220760 |
161 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs763688274 CA3672085 |
163 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199674196 CA3672084 |
163 | H>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA363220776 rs9379860 |
163 | H>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs201001724 CA3672088 |
165 | E>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs750333427 CA363220791 |
166 | C>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672089 rs750333427 |
166 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1240482813 CA363220797 |
167 | R>G | No |
ClinGen gnomAD |
|
|
rs9379861 CA3672092 |
167 | R>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs9379861 CA3672091 VAR_049833 |
167 | R>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs370722939 CA3672093 |
168 | S>C | No |
ClinGen ESP ExAC gnomAD |
|
|
rs994577754 CA136274975 |
169 | T>A | No |
ClinGen Ensembl |
|
|
rs533719945 CA3672094 |
170 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs553460921 CA3672095 |
171 | W>C | No |
ClinGen 1000Genomes ExAC |
|
|
rs778463883 CA136274983 |
172 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA136274979 rs1022540747 |
172 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA3672096 rs772272361 |
172 | Y>D | No |
ClinGen ExAC gnomAD |
|
|
rs747495149 CA3672098 |
173 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1206290163 CA363220830 |
173 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 174 | Q>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771349722 CA3672099 |
174 | Q>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 174 | Q>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1581548619 CA363220851 |
176 | Q>P | No |
ClinGen Ensembl |
|
|
CA3672102 rs768133971 |
177 | I>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 177 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1334633363 CA363220864 |
178 | Q>* | No |
ClinGen gnomAD |
|
|
rs773990438 CA3672103 |
180 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA3672104 VAR_026211 rs9358936 |
181 | N>D | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs71544290 CA136275014 |
181 | N>D | No |
ClinGen Ensembl |
|
|
CA363220891 rs9393711 |
181 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs147417438 CA3672107 |
182 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
VAR_049834 CA3672106 rs12205731 |
182 | A>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs766201604 CA3672108 |
184 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1458506669 CA363220910 |
185 | E>K | No |
ClinGen gnomAD |
|
|
CA363220959 rs1220657079 |
192 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs754790974 CA3672110 |
192 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA136275036 rs988901819 |
193 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs577843780 CA3672114 |
194 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1426293806 CA363220978 |
195 | V>A | No |
ClinGen gnomAD |
|
|
CA363220974 rs1260509932 |
195 | V>I | No |
ClinGen gnomAD |
|
|
CA136275046 rs945173230 |
196 | A>E | No |
ClinGen TOPMed |
|
|
rs890343376 CA136275060 |
198 | G>E | No |
ClinGen gnomAD |
|
|
rs1581549145 CA363221002 |
199 | V>G | No |
ClinGen Ensembl |
|
|
CA363220999 rs1469128880 |
199 | V>M | No |
ClinGen gnomAD |
|
|
CA363221009 rs1440911106 |
200 | G>V | No |
ClinGen TOPMed |
|
|
CA136275066 rs868151118 |
201 | L>P | No |
ClinGen Ensembl |
|
|
CA3672118 rs201661141 |
202 | Y>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 202 | Y>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781627758 CA3672119 |
203 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs746274199 CA3672120 |
207 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA3672121 rs770166336 |
209 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
VAR_049835 CA3672122 rs35183513 |
211 | R>K | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA363221083 rs1261720377 |
212 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA3672124 rs771602294 |
213 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs144289111 CA3672126 |
215 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3672127 rs547467729 |
216 | E>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 216 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA363221103 rs1479935816 |
216 | E>G | No |
ClinGen gnomAD |
|
|
rs1581549692 CA363221117 |
218 | V>G | No |
ClinGen Ensembl |
|
|
rs972909264 CA136275156 |
218 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs776629062 CA3672128 |
220 | C>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672129 rs759287621 |
221 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs1272321939 CA363221133 |
221 | I>V | No |
ClinGen TOPMed |
|
|
CA363221141 rs1221955354 |
222 | I>T | No |
ClinGen TOPMed |
|
|
CA363221155 rs1344638975 |
224 | N>S | No |
ClinGen gnomAD |
|
|
rs752985849 CA3672132 |
227 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs373600244 CA3672133 |
228 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1223114438 CA363221195 |
231 | K>E | No |
ClinGen TOPMed |
|
| TCGA novel | 231 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs750127680 CA363221203 |
232 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750127680 CA3672134 |
232 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs939020988 CA136275209 |
233 | A>G | No |
ClinGen TOPMed |
|
|
rs1311603270 CA363221207 |
233 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs375636866 CA3672137 |
238 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375636866 CA3672136 |
238 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3672138 rs746365187 |
238 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA363221255 rs1581558809 |
239 | D>A | No |
ClinGen Ensembl |
|
|
CA3672160 rs777332474 |
239 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs142279595 CA3672162 |
240 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs566739896 CA3672161 |
240 | P>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA363221267 rs1328600336 |
241 | F>C | No |
ClinGen gnomAD |
|
|
CA3672164 rs745794122 |
242 | F>C | No |
ClinGen ExAC gnomAD |
|
|
rs532046699 CA3672163 |
242 | F>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
TCGA novel rs1481353241 CA363221282 |
243 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen TOPMed |
|
CA3672166 rs368782404 |
244 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1650566 CA3672167 COSM595555 rs780468088 |
245 | A>S | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3672168 rs780468088 |
245 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA3672169 rs372417646 |
245 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1485891251 CA363221302 |
247 | P>T | No |
ClinGen TOPMed |
|
|
rs767499921 CA3672171 |
248 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA3672172 rs568843545 |
250 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3672174 rs766940767 |
252 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs755382991 CA3672176 |
254 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs755382991 CA363221348 |
254 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs779284406 CA3672177 |
257 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs959875487 CA136276457 |
260 | L>P | No |
ClinGen TOPMed |
|
|
rs745427991 CA3672182 |
264 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1381793971 CA363221403 |
264 | A>V | No |
ClinGen TOPMed |
|
| TCGA novel | 265 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3672184 COSM3410850 rs780178954 COSM3410851 |
265 | G>R | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3672185 rs749190080 |
266 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA136276544 rs982086366 |
267 | S>G | No |
ClinGen Ensembl |
|
|
CA3672186 rs568607568 |
269 | F>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3672188 rs761954790 |
271 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA363221454 rs1340561675 |
272 | R>K | No |
ClinGen gnomAD |
|
|
rs1358396821 CA363221464 |
273 | Q>R | No |
ClinGen TOPMed |
|
|
CA363221468 rs1581559485 |
274 | Q>* | No |
ClinGen Ensembl |
|
|
rs927970646 CA136276577 |
275 | K>E | No |
ClinGen Ensembl |
|
|
rs772400538 CA3672190 |
279 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA3672191 rs534380775 |
280 | L>P | No |
ClinGen 1000Genomes ExAC |
|
|
rs1342031902 CA363221519 |
282 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA3672193 rs766426965 |
284 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1342779422 CA363221540 |
285 | E>K | No |
ClinGen gnomAD |
|
|
CA363221554 rs1581559660 |
286 | S>N | No |
ClinGen Ensembl |
|
|
rs1581559678 CA363221587 |
290 | M>T | No |
ClinGen Ensembl |
|
|
CA3672194 rs754362000 |
293 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA363221619 rs1280758347 |
294 | G>E | No |
ClinGen gnomAD |
|
|
rs531941877 CA136276634 |
298 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs531941877 CA363221646 |
298 | T>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3672195 rs759993496 |
299 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA363221654 rs146618645 |
300 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3672197 rs111392726 |
300 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3672196 rs146618645 |
300 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs947204049 CA136276668 |
301 | E>G | No |
ClinGen gnomAD |
|
|
CA3672198 rs554201845 |
301 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3672200 rs767266552 |
303 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363221681 rs1308158086 |
304 | L>R | No |
ClinGen TOPMed |
|
|
VAR_049836 CA3672242 rs13216828 |
307 | S>N | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA363221719 rs1581561508 |
308 | L>P | No |
ClinGen Ensembl |
|
|
rs1581561520 CA363221724 |
309 | Q>* | No |
ClinGen Ensembl |
|
|
CA363221738 rs1265048713 |
311 | E>K | No |
ClinGen TOPMed gnomAD |
|
| rs766000909 | 312 | L>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA363221748 rs1211989450 |
312 | L>F | No |
ClinGen gnomAD |
|
|
rs1422599762 CA363221773 |
314 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA3672260 rs774800322 |
315 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672261 rs762255812 |
316 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA3672262 rs766205182 |
319 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363221808 rs1349155258 |
319 | Y>D | No |
ClinGen Ensembl |
|
|
CA363221811 rs766205182 |
319 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766205182 CA363221810 |
319 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672263 rs529878369 |
322 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs529878369 CA3672264 |
322 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA363221827 rs529878369 |
322 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 324 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3672283 rs144958425 |
325 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs542217150 CA363221904 |
327 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3672284 rs542217150 |
327 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM184122 CA3672287 rs376441641 |
329 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA gnomAD |
|
CA3672288 rs751467291 |
331 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA363221943 rs1234742503 |
333 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
rs780914370 CA363221948 |
334 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780914370 CA363221949 |
334 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1433761506 CA363221947 |
334 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1433761506 CA363221945 |
334 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs780914370 CA3672290 |
334 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363221952 rs1302783699 |
335 | A>G | No |
ClinGen TOPMed |
No associated diseases with P78410
1 regional properties for P78410
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | NAC domain | 9 - 159 | IPR003441 |
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| external side of plasma membrane | The leaflet of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| signaling receptor binding | Binding to one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| positive regulation of interferon-gamma production | Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon. |
| regulation of cytokine production | Any process that modulates the frequency, rate, or extent of production of a cytokine. |
| T cell mediated immunity | Any process involved in the carrying out of an immune response by a T cell. |
| T cell receptor signaling pathway | The series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKMASSLAFL | LLNFHVSLLL | VQLLTPCSAQ | FSVLGPSGPI | LAMVGEDADL | PCHLFPTMSA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| ETMELKWVSS | SLRQVVNVYA | DGKEVEDRQS | APYRGRTSIL | RDGITAGKAA | LRIHNVTASD |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SGKYLCYFQD | GDFYEKALVE | LKVAALGSNL | HVEVKGYEDG | GIHLECRSTG | WYPQPQIQWS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| NAKGENIPAV | EAPVVADGVG | LYEVAASVIM | RGGSGEGVSC | IIRNSLLGLE | KTASISIADP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| FFRSAQPWIA | ALAGTLPILL | LLLAGASYFL | WRQQKEITAL | SSEIESEQEM | KEMGYAATER |
| 310 | 320 | 330 | |||
| EISLRESLQE | ELKRKKIQYL | TRGEESSSDT | NKSA |