O00481
Gene name |
BTN3A1 (BTF5) |
Protein name |
Butyrophilin subfamily 3 member A1 |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:11119 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
23 structures for O00481
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 4F80 | X-ray | 194 A | A | 30-246 | PDB |
| 4F9L | X-ray | 314 A | A/B | 30-246 | PDB |
| 4F9P | X-ray | 352 A | A/B | 30-246 | PDB |
| 4JKW | X-ray | 201 A | A | 28-143 | PDB |
| 4K55 | X-ray | 191 A | A | 28-143 | PDB |
| 4N7I | X-ray | 140 A | A | 328-513 | PDB |
| 4N7U | X-ray | 146 A | A | 328-513 | PDB |
| 4V1P | X-ray | 204 A | A | 325-512 | PDB |
| 5HM7 | X-ray | 193 A | A/B | 272-513 | PDB |
| 5LYG | X-ray | 160 A | A | 327-513 | PDB |
| 5LYK | X-ray | 170 A | A | 327-513 | PDB |
| 5ZXK | X-ray | 196 A | A | 328-513 | PDB |
| 6ISM | X-ray | 125 A | A | 328-513 | PDB |
| 6ITA | X-ray | 120 A | A | 328-513 | PDB |
| 6J06 | X-ray | 265 A | A/B/C | 328-513 | PDB |
| 6XLQ | X-ray | 300 A | A/D/G/J | 30-255 | PDB |
| 8DFX | X-ray | 555 A | B | 30-246 | PDB |
| 8IXV | X-ray | 172 A | A | 328-513 | PDB |
| 8IZE | X-ray | 140 A | A | 328-513 | PDB |
| 8IZG | X-ray | 160 A | A | 328-513 | PDB |
| 8JYC | X-ray | 229 A | C/D | 328-513 | PDB |
| 8JYE | X-ray | 218 A | C/D | 328-513 | PDB |
| AF-O00481-F1 | Predicted | AlphaFoldDB |
424 variants for O00481
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA363229375 rs1581622953 |
5 | S>T | No |
ClinGen Ensembl |
|
| TCGA novel | 7 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3672751 rs55676749 |
9 | F>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs540333878 CA136306774 |
12 | L>F | No |
ClinGen gnomAD |
|
|
CA363229450 rs1264673109 |
12 | L>P | No |
ClinGen TOPMed |
|
|
rs766105293 CA3672752 |
13 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA3672754 rs753390954 |
13 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672753 rs753390954 |
13 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672756 COSM1076778 rs374921833 COSM1154633 |
15 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
VAR_061305 rs56161420 CA3672757 |
15 | R>H | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs56161420 CA3672758 |
15 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs374921833 CA3672755 |
15 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs746846979 CA3672759 |
16 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA3672760 rs770798335 |
17 | C>S | No |
ClinGen ExAC gnomAD |
|
|
rs1341107122 CA363229505 |
17 | C>W | No |
ClinGen gnomAD |
|
|
rs1202748758 CA363229507 |
18 | L>F | No |
ClinGen gnomAD |
|
|
rs746012673 CA3672762 |
22 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363229556 rs1254019114 |
24 | L>F | No |
ClinGen gnomAD |
|
|
rs1422071872 CA363229568 |
25 | M>V | No |
ClinGen gnomAD |
|
|
rs1386088852 CA363229593 |
27 | H>Y | No |
ClinGen gnomAD |
|
|
rs769935296 CA3672764 |
28 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363229612 rs769935296 |
28 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs904782252 CA136306832 |
29 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3672789 rs773515134 |
31 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs761066899 CA3672790 |
32 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764843210 CA3672791 |
34 | L>V | No |
ClinGen ExAC |
|
|
CA363229724 rs1267452323 |
37 | S>P | No |
ClinGen gnomAD |
|
|
CA363229728 rs1206909982 |
38 | G>R | No |
ClinGen gnomAD |
|
|
CA363229740 rs1481180634 |
40 | I>L | No |
ClinGen TOPMed |
|
|
rs936292956 CA363229746 |
40 | I>M | No |
ClinGen gnomAD |
|
|
rs1431908921 CA363229748 |
41 | L>V | No |
ClinGen TOPMed |
|
|
rs1190958897 CA363229763 |
43 | M>I | No |
ClinGen gnomAD |
|
|
rs763634366 CA363229759 |
43 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs763634366 CA3672794 |
43 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA363229779 rs564000550 |
46 | E>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3672795 rs564000550 |
46 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs377117570 CA3672797 |
48 | A>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs750226632 CA3672798 |
48 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672799 rs139011114 |
51 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1457136522 CA363229827 |
53 | H>R | No |
ClinGen gnomAD |
|
|
rs1291462800 CA363229837 |
55 | F>L | No |
ClinGen gnomAD |
|
|
CA136307144 rs998206119 |
56 | P>A | No |
ClinGen Ensembl |
|
|
rs780278847 COSM228072 CA3672800 |
56 | P>L | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs755062420 CA3672802 |
63 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA3672803 rs779020584 |
64 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748253847 CA363229906 |
65 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672806 rs149895116 |
66 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1221053668 CA363229921 |
67 | W>* | No |
ClinGen gnomAD |
|
| TCGA novel | 69 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3672808 rs771284361 |
74 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA363229980 rs1234005698 |
76 | V>M | No |
ClinGen gnomAD |
|
|
rs199781860 CA3672810 |
78 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1183686764 CA363230007 |
80 | A>T | No |
ClinGen gnomAD |
|
|
CA3672811 rs763829130 |
82 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA136307242 rs1026663094 |
85 | V>L | No |
ClinGen Ensembl |
|
|
CA363230062 rs1162192610 |
87 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA363230060 rs1470769159 |
87 | D>G | No |
ClinGen TOPMed |
|
|
CA3672813 rs150905778 |
90 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA363230085 rs150905778 |
90 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3672814 rs767404028 |
91 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs549341227 CA3672815 |
92 | P>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3672816 rs755894627 |
92 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs753615560 CA3672818 |
93 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA363230126 rs1374083463 |
94 | R>* | No |
ClinGen gnomAD |
|
|
CA3672819 rs755260389 |
94 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs779075658 CA3672820 |
97 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA363230174 rs748221919 |
98 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672821 rs748221919 |
98 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA136307320 rs969820507 |
98 | S>P | No |
ClinGen Ensembl |
|
|
CA363230176 rs748221919 |
98 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs926171888 CA136307342 |
101 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA363230217 rs1233981322 |
102 | D>G | No |
ClinGen gnomAD |
|
|
CA3672824 rs201217877 |
104 | I>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs778170905 CA3672823 |
104 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1444917992 CA363230309 |
110 | A>S | No |
ClinGen gnomAD |
|
|
CA363230323 rs1358593797 |
111 | L>F | No |
ClinGen TOPMed |
|
|
rs376221996 CA3672826 |
112 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3672827 rs746233858 |
112 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1374245336 CA363230345 |
113 | I>M | No |
ClinGen TOPMed |
|
|
rs768468170 CA3672828 |
113 | I>V | No |
ClinGen ExAC gnomAD |
|
| rs1329386502 | 115 | N>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1362926379 CA363230362 |
115 | N>D | No |
ClinGen gnomAD |
|
|
rs2393650 CA3672830 |
115 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1297244230 CA363230368 |
115 | N>S | No |
ClinGen TOPMed |
|
|
CA363230392 rs1447380495 |
117 | T>A | No |
ClinGen gnomAD |
|
|
rs1355489360 CA363230459 |
122 | G>A | No |
ClinGen TOPMed |
|
|
rs1389806597 CA363230505 |
126 | C>G | No |
ClinGen gnomAD |
|
| TCGA novel | 126 | C>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA363230544 rs1461205077 |
128 | F>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 130 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3672832 rs773029993 |
134 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363230703 rs1340410893 |
141 | L>M | No |
ClinGen gnomAD |
|
|
CA136308273 rs996134212 |
149 | D>G | No |
ClinGen Ensembl |
|
|
rs900071015 CA136308268 |
149 | D>N | No |
ClinGen Ensembl |
|
|
CA363231482 rs147375005 |
151 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1561845190 CA363231499 |
152 | V>G | No |
ClinGen Ensembl |
|
|
rs117508907 CA3672847 |
152 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1265570779 CA363231509 |
153 | D>V | No |
ClinGen gnomAD |
|
|
CA3672848 rs771608988 |
153 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363231532 rs1459506946 |
154 | V>A | No |
ClinGen TOPMed |
|
|
rs1323544082 CA363231561 |
156 | G>S | No |
ClinGen gnomAD |
|
|
CA136308306 rs538727485 |
159 | D>G | No |
ClinGen 1000Genomes |
|
|
rs147150065 CA3672849 |
160 | G>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376863801 CA136308321 |
162 | I>T | No |
ClinGen ESP |
|
|
rs1209989396 CA363231679 |
162 | I>V | No |
ClinGen gnomAD |
|
|
CA3672852 rs776498634 |
164 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs557579831 CA3672851 |
164 | L>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs571412787 CA3672853 |
167 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA363231768 rs1480097077 |
167 | R>T | No |
ClinGen TOPMed |
|
|
rs1267929623 CA363231781 |
168 | S>P | No |
ClinGen TOPMed |
|
|
rs1201438027 CA363231836 |
171 | W>L | No |
ClinGen TOPMed gnomAD |
|
|
CA363231860 rs1025008914 |
172 | Y>* | No |
ClinGen TOPMed |
|
|
CA363231855 rs1484597711 |
172 | Y>C | No |
ClinGen TOPMed |
|
|
CA3672854 rs764942378 |
172 | Y>D | No |
ClinGen ExAC gnomAD |
|
|
CA3672855 rs764942378 |
172 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs533940581 CA3672856 |
173 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672857 rs764220613 |
174 | Q>P | No |
ClinGen ExAC |
|
|
CA363231935 rs1581626260 |
176 | Q>P | No |
ClinGen Ensembl |
|
|
rs1158598624 CA363231998 |
179 | W>C | No |
ClinGen gnomAD |
|
|
CA363232002 rs1386701357 |
180 | S>G | No |
ClinGen gnomAD |
|
|
CA363232016 rs1222036579 |
180 | S>R | No |
ClinGen TOPMed |
|
|
CA136308400 rs909854506 |
181 | N>D | No |
ClinGen TOPMed |
|
|
rs1319269284 CA363232040 |
182 | N>D | No |
ClinGen gnomAD |
|
|
CA3672859 rs138215264 |
182 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA363232052 rs1330840264 |
182 | N>T | No |
ClinGen gnomAD |
|
|
rs369843054 CA3672860 |
184 | G>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA363232167 rs1227226844 |
188 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA363232165 rs1227226844 |
188 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs973409411 CA136308415 |
190 | V>M | No |
ClinGen TOPMed |
|
|
CA363232211 rs1352352281 |
191 | E>G | No |
ClinGen gnomAD |
|
|
rs148613503 CA3672862 |
193 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 193 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 194 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3672865 rs780410774 |
195 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756553049 CA3672864 |
195 | V>F | No |
ClinGen ExAC TOPMed |
|
|
rs1581626429 CA363232281 |
196 | A>T | No |
ClinGen Ensembl |
|
|
rs112574152 CA3672866 |
196 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA363232299 rs1240880657 |
197 | D>N | No |
ClinGen TOPMed |
|
|
CA363232304 rs1202235496 |
197 | D>V | No |
ClinGen TOPMed |
|
|
rs151227699 CA3672869 |
198 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1581626513 CA363232340 |
199 | V>A | No |
ClinGen Ensembl |
|
|
CA363232344 rs1581626513 |
199 | V>G | No |
ClinGen Ensembl |
|
|
CA363232350 rs1236107628 |
200 | G>S | No |
ClinGen TOPMed |
|
|
rs1362099437 CA363232368 |
201 | L>Q | No |
ClinGen gnomAD |
|
|
rs1057932 CA136308463 |
203 | A>E | No |
ClinGen Ensembl |
|
|
CA363232461 rs1159310106 |
207 | S>P | No |
ClinGen gnomAD |
|
|
CA3672873 rs776552214 |
208 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1229192058 CA363232488 |
209 | I>V | No |
ClinGen TOPMed |
|
|
rs1403947389 CA363232514 |
210 | M>I | No |
ClinGen gnomAD |
|
|
rs1352175876 CA363232507 |
210 | M>V | No |
ClinGen gnomAD |
|
|
CA3672874 rs759408823 |
211 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672875 rs769608272 |
214 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1581626608 CA363232573 |
216 | E>G | No |
ClinGen Ensembl |
|
| TCGA novel | 217 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1334950223 CA363232578 |
217 | G>S | No |
ClinGen TOPMed |
|
|
CA3672876 rs775425163 |
218 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs999174057 CA136308552 |
219 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs999174057 CA363232603 |
219 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs762628652 CA3672877 |
220 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3672879 rs774667179 |
222 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 223 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3672881 rs1057933 VAR_021170 |
224 | S>N | No |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
|
CA3672882 rs201789912 |
227 | L>F | No |
ClinGen ExAC gnomAD |
|
|
RCV000949922 CA3672883 rs144114619 |
227 | L>H | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs754276670 CA3672886 |
228 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754276670 CA3672885 |
228 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1182604848 CA363232733 |
231 | K>R | No |
ClinGen TOPMed |
|
|
CA363232741 rs1442598163 |
232 | T>A | No |
ClinGen TOPMed |
|
|
rs1561845644 CA363232745 |
232 | T>I | No |
ClinGen Ensembl |
|
|
CA363232758 rs1443059541 |
233 | A>G | No |
ClinGen gnomAD |
|
|
CA363232763 rs1165825290 |
234 | S>G | No |
ClinGen gnomAD |
|
|
rs777508118 CA3672888 |
235 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779021158 CA136308598 |
237 | I>V | No |
ClinGen Ensembl |
|
|
CA3672892 rs141319367 |
238 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA363233376 rs747919410 |
239 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs747919410 CA3672915 |
239 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3672893 rs769813059 |
239 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 241 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1349423521 CA363233438 |
243 | R>G | No |
ClinGen TOPMed |
|
|
CA136309339 rs1031255880 |
244 | S>T | No |
ClinGen TOPMed |
|
|
CA363233511 rs1365436170 |
246 | Q>H | No |
ClinGen TOPMed |
|
|
rs145059723 CA3672917 |
246 | Q>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs760835311 CA3672918 |
247 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760835311 CA363233526 |
247 | R>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199668049 CA3672922 |
251 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs199668049 CA3672921 |
251 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs753101869 CA3672923 |
253 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA363233628 rs753101869 |
253 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs763283661 CA3672924 |
254 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1581628937 CA363233669 |
255 | T>I | No |
ClinGen Ensembl |
|
|
CA363233661 rs1290300790 |
255 | T>P | No |
ClinGen gnomAD |
|
|
CA363233663 rs1290300790 |
255 | T>S | No |
ClinGen gnomAD |
|
|
CA3672925 rs767179748 |
256 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750004257 CA3672926 |
257 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363233690 rs750004257 |
257 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1042452907 CA136309421 |
258 | V>I | No |
ClinGen Ensembl |
|
|
CA3672928 rs779377263 |
259 | L>F | No |
ClinGen ExAC |
|
|
CA363233728 rs1429392029 |
260 | L>M | No |
ClinGen TOPMed |
|
|
rs753377308 CA3672929 |
260 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA363233739 rs1225403602 |
261 | L>R | No |
ClinGen gnomAD |
|
|
rs754940106 CA3672930 |
263 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1213846311 CA363233776 |
264 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA3672931 rs778969041 |
264 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs370086892 CA3672934 |
265 | G>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3672932 rs747975376 |
265 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA3672933 rs370086892 |
265 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3672935 rs747142626 |
266 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA363233808 rs776640643 |
267 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776640643 CA3672937 |
267 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363233863 rs1410535621 |
270 | L>P | No |
ClinGen gnomAD |
|
|
rs770336903 CA3672939 |
273 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363233907 rs770336903 |
273 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363233921 rs1345424365 |
274 | Q>K | No |
ClinGen gnomAD |
|
|
CA3672940 rs775927679 |
275 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363233936 rs775927679 |
275 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363233957 rs1405437688 |
276 | E>G | No |
ClinGen gnomAD |
|
|
rs1446054962 CA363233951 |
276 | E>K | No |
ClinGen gnomAD |
|
|
rs1307362837 CA363233966 |
277 | K>E | No |
ClinGen gnomAD |
|
| rs35139329 | 278 | K>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs555187363 CA3672941 |
279 | T>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA363234037 rs1222143848 |
281 | F>V | No |
ClinGen gnomAD |
|
|
CA3672942 VAR_061306 rs41266839 |
282 | R>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs374353978 CA3672943 |
284 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs148935340 CA3672944 |
285 | K>M | No |
ClinGen ESP ExAC gnomAD |
|
|
rs770513171 CA136309480 |
285 | K>N | No |
ClinGen Ensembl |
|
|
rs368458530 CA3672945 |
286 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs753335657 CA3672946 |
288 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs540382529 CA3672947 |
289 | E>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA363234158 rs540382529 |
289 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA136309499 rs372807136 |
290 | L>S | No |
ClinGen ESP TOPMed |
|
|
rs779022065 CA363234167 |
290 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA136309504 CA3672949 rs752611443 |
293 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376287137 CA3672951 |
294 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376287137 CA3672950 |
294 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs560433214 CA136309528 |
296 | S>C | No |
ClinGen 1000Genomes |
|
|
CA363234269 rs1476185514 |
296 | S>R | No |
ClinGen TOPMed |
|
|
rs1028204515 CA363234285 |
297 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA136309535 rs1028204515 |
297 | T>K | No |
ClinGen TOPMed gnomAD |
|
|
CA3672952 rs746814701 |
298 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA3672953 rs771096142 |
299 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs368232435 CA3672954 |
299 | K>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs745958653 CA3672955 |
302 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307264777 CA363234366 |
303 | S>I | No |
ClinGen gnomAD |
|
|
rs769826029 CA3672956 |
305 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3672975 rs756203103 |
307 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA363234485 rs1385345430 |
310 | E>* | No |
ClinGen gnomAD |
|
|
CA3672977 rs749368770 |
312 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3672998 rs780221853 |
313 | R>I | No |
ClinGen ExAC gnomAD |
|
|
rs1363255875 CA363234576 |
314 | W>* | No |
ClinGen TOPMed |
|
|
CA3672999 rs753970727 |
314 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA363234607 rs1221125687 |
316 | S>N | No |
ClinGen gnomAD |
|
|
rs143801530 CA3673000 |
317 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1169355260 CA363234648 |
319 | Y>C | No |
ClinGen gnomAD |
|
|
rs779289471 CA3673001 |
321 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs748627762 CA3673002 |
322 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363235098 rs1423147802 |
323 | G>E | No |
ClinGen gnomAD |
|
|
CA3673024 rs779859515 |
326 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1016249513 CA136310756 |
328 | A>S | No |
ClinGen TOPMed |
|
|
CA363235129 rs1016249513 |
328 | A>T | No |
ClinGen TOPMed |
|
|
CA363235135 rs1417621396 |
329 | Y>H | No |
ClinGen TOPMed |
|
|
CA363235145 rs1250100726 |
330 | N>I | No |
ClinGen TOPMed |
|
|
rs1460189922 CA363235165 |
331 | E>A | No |
ClinGen gnomAD |
|
|
rs1185780014 CA363235183 |
333 | K>R | No |
ClinGen gnomAD |
|
|
rs1257253369 CA363235197 |
335 | A>S | No |
ClinGen gnomAD |
|
|
CA136311202 rs574630664 |
335 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA363235201 rs1581632411 |
336 | L>V | No |
ClinGen Ensembl |
|
|
rs1449111942 CA363235206 |
337 | F>L | No |
ClinGen TOPMed |
|
|
CA363235216 rs1191578944 |
338 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA3673047 rs527423717 |
338 | K>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs371446612 CA136315001 |
340 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371446612 CA3673091 |
340 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA363235845 rs1581634521 |
341 | D>V | No |
ClinGen Ensembl |
|
|
rs986919192 CA136315009 |
342 | V>M | No |
ClinGen gnomAD |
|
|
rs1214878237 CA363235892 |
345 | D>V | No |
ClinGen gnomAD |
|
|
CA3673093 rs375300833 |
345 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1240264767 CA363235912 |
347 | K>R | No |
ClinGen gnomAD |
|
|
CA3673094 rs774671240 |
348 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA363235963 rs1194346451 |
351 | P>L | No |
ClinGen gnomAD |
|
|
CA136315015 rs970629789 |
352 | I>V | No |
ClinGen TOPMed |
|
|
rs762018425 CA3673095 |
355 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA363236046 rs1351884136 |
357 | E>G | No |
ClinGen gnomAD |
|
|
rs773325432 CA3673097 |
360 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA363236121 rs1415392216 |
363 | Q>K | No |
ClinGen gnomAD |
|
|
rs1318117949 CA363236127 |
363 | Q>R | No |
ClinGen gnomAD |
|
|
CA3673100 rs766874119 |
364 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3673101 rs766874119 |
364 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3673102 rs763766883 |
364 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766874119 CA3673099 |
364 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756772508 CA3673104 |
366 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA363236156 rs756772508 |
366 | K>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 368 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA363236188 COSM1076789 rs1345343630 |
368 | P>S | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA363236197 rs1281839812 |
369 | Q>K | No |
ClinGen gnomAD |
|
|
rs756046564 CA3673107 |
369 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs749121104 CA3673109 |
372 | P>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 373 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs571605350 CA3673110 |
374 | N>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs779285604 CA3673111 |
375 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA3673112 rs748435299 |
377 | R>T | No |
ClinGen ExAC |
|
|
rs1291844965 CA363236281 |
380 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA3673114 RCV000895854 rs773202042 |
382 | Y>* | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 382 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3673115 rs754406433 |
383 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1165663777 CA363236305 |
383 | C>W | No |
ClinGen TOPMed |
|
|
CA363236316 rs1437621324 |
385 | L>P | No |
ClinGen TOPMed |
|
|
CA3673117 rs777080463 |
386 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA3673119 rs765526774 |
387 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA363236341 rs1179225516 |
389 | S>N | No |
ClinGen TOPMed |
|
|
rs775819336 CA3673120 |
390 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA3673121 rs761439687 |
391 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA3673122 rs767168647 |
392 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs1440966337 CA363236359 |
392 | S>T | No |
ClinGen gnomAD |
|
|
CA3673123 rs749951455 |
393 | G>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 394 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3673125 rs766452647 |
395 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA363236394 rs1211595178 |
397 | W>* | No |
ClinGen gnomAD |
|
|
rs1208743048 CA363236402 |
398 | E>K | No |
ClinGen TOPMed |
|
|
CA363236412 rs1581634863 |
399 | V>G | No |
ClinGen Ensembl |
|
|
rs141935374 CA3673126 |
399 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1581634878 CA363236426 |
401 | V>G | No |
ClinGen Ensembl |
|
|
rs1181276432 CA363236429 |
402 | G>W | No |
ClinGen gnomAD |
|
|
rs1213974902 CA363236440 |
403 | D>E | No |
ClinGen TOPMed |
|
|
CA3673129 rs138001346 |
404 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs143476765 CA3673130 |
405 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1456807437 CA363236468 |
407 | W>* | No |
ClinGen gnomAD |
|
|
CA363236470 rs1456807437 |
407 | W>C | No |
ClinGen gnomAD |
|
|
rs1385127723 CA363236463 |
407 | W>G | No |
ClinGen gnomAD |
|
|
rs1385127723 CA363236462 |
407 | W>R | No |
ClinGen gnomAD |
|
|
CA363236473 rs1338063807 |
408 | H>Y | No |
ClinGen TOPMed |
|
|
CA363236483 rs1165536313 |
409 | I>T | No |
ClinGen gnomAD |
|
|
rs1581634953 CA363236480 |
409 | I>V | No |
ClinGen Ensembl |
|
|
CA136315165 rs267600911 |
410 | G>E | No |
ClinGen Ensembl |
|
|
CA363236494 rs1408369590 |
411 | V>A | No |
ClinGen Ensembl |
|
|
CA136315168 rs1047874186 |
411 | V>M | No |
ClinGen Ensembl |
|
|
rs1386315437 CA363236505 |
413 | S>G | No |
ClinGen TOPMed |
|
|
CA136315179 rs944277725 |
420 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA3673133 rs200068064 |
420 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3673135 rs777135479 |
421 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3673134 rs777135479 |
421 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1024060783 CA136315225 |
422 | V>D | No |
ClinGen TOPMed gnomAD |
|
|
CA3673136 rs770281998 |
425 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775872488 CA363236596 |
426 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775872488 CA3673137 |
426 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA363236595 rs775872488 |
426 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3673138 rs763355527 |
431 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA3673139 rs767099545 |
433 | M>T | No |
ClinGen ExAC |
|
|
CA363236646 rs1195355388 |
433 | M>V | No |
ClinGen gnomAD |
|
|
rs201160627 CA3673141 |
434 | G>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201679795 CA3673140 |
434 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs765933422 CA3673142 |
439 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA3673143 rs753391625 |
440 | K>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1422453448 CA363236699 |
441 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1422453448 CA363236700 |
441 | Y>F | No |
ClinGen TOPMed gnomAD |
|
|
rs147166656 COSM184138 CA3673145 |
442 | R>Q | upper_aerodigestive_tract large_intestine prostate [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA3673144 rs772435705 |
442 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA3673146 rs751120314 |
443 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1048624250 CA136315277 |
443 | T>I | No |
ClinGen TOPMed |
|
|
rs187033952 CA3673149 |
446 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3673150 rs747195646 |
447 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs373072663 CA3673151 |
448 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1325831096 CA363236743 |
449 | T>I | No |
ClinGen gnomAD |
|
|
CA363236742 rs1325831096 |
449 | T>N | No |
ClinGen gnomAD |
|
|
rs781316705 CA3673152 |
450 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA363236762 rs1276339158 |
452 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1219421292 CA363236770 |
453 | L>P | No |
ClinGen gnomAD |
|
|
rs1262761996 CA363236781 |
454 | P>L | No |
ClinGen gnomAD |
|
|
CA136315315 rs868442716 |
454 | P>S | No |
ClinGen Ensembl |
|
|
rs564185969 CA3673154 |
455 | K>N | No |
ClinGen 1000Genomes ExAC TOPMed |
|
|
CA3673157 rs749649652 |
456 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs4712990 CA3673156 |
456 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
VAR_028788 rs4712990 CA3673155 |
456 | P>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1399763366 CA363236807 |
457 | P>S | No |
ClinGen TOPMed |
|
| TCGA novel | 458 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs769000428 CA3673158 |
459 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA3673159 rs772756818 |
460 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA363236850 rs1171963582 |
461 | G>A | No |
ClinGen TOPMed |
|
|
CA3673160 rs760437554 |
461 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA363236858 rs1477864267 |
462 | V>D | No |
ClinGen gnomAD |
|
|
rs1430864771 CA363236853 |
462 | V>I | No |
ClinGen TOPMed |
|
|
CA3673161 rs770673654 |
465 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs191073512 CA3673163 |
468 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA363236934 rs1384011590 |
469 | G>R | No |
ClinGen gnomAD |
|
|
rs752612510 CA3673165 |
470 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs765294453 CA3673164 |
470 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA136315414 rs968753844 |
471 | I>M | No |
ClinGen TOPMed |
|
|
rs1400761145 CA363236962 |
471 | I>T | No |
ClinGen gnomAD |
|
|
rs149670627 CA3673166 |
471 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs955422332 CA136315415 |
472 | S>A | No |
ClinGen TOPMed gnomAD |
|
|
CA363236987 rs1310719191 |
473 | F>S | No |
ClinGen gnomAD |
|
|
rs987253156 CA136315416 |
476 | A>V | No |
ClinGen Ensembl |
|
|
rs1561850477 CA363237034 |
477 | V>L | No |
ClinGen Ensembl |
|
|
CA3673167 rs563390836 |
480 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1214999268 CA363237082 |
481 | H>R | No |
ClinGen gnomAD |
|
|
CA3673169 rs757512014 |
483 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA363237108 rs757512014 |
483 | H>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 483 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA363237123 rs1488321721 |
484 | T>I | No |
ClinGen gnomAD |
|
|
CA136315422 rs943199233 |
484 | T>S | No |
ClinGen Ensembl |
|
|
rs1561850520 CA363237144 COSM595548 |
486 | L>P | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
| TCGA novel | 487 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs144592497 CA3673172 |
488 | V>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3673171 rs144592497 |
488 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1338550281 CA363237174 |
489 | S>P | No |
ClinGen TOPMed |
|
|
CA363237214 rs1047653428 |
493 | A>P | No |
ClinGen gnomAD |
|
|
rs1047653428 CA136315448 |
493 | A>S | No |
ClinGen gnomAD |
|
|
CA363237225 rs1417638582 |
494 | L>V | No |
ClinGen gnomAD |
|
|
CA3673174 rs749750301 |
495 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA136315461 rs1048539288 |
498 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1293060536 CA363237303 |
500 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs779371964 CA3673176 |
501 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1388680437 CA363237321 |
502 | T>S | No |
ClinGen gnomAD |
|
|
rs1302247776 CA363237343 |
504 | E>* | No |
ClinGen gnomAD |
|
|
CA3673177 rs148488957 |
504 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 505 | P>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs536232321 CA3673179 |
506 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA136315478 rs777604885 |
509 | T>A | No |
ClinGen gnomAD |
|
|
CA136315483 rs1045882122 |
509 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
rs763013076 CA3673183 |
512 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs774848813 CA3673182 |
512 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs751420710 CA363237433 |
513 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751420710 CA3673185 |
513 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3673186 rs146475063 |
513 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs750580366 CA363237450 |
514 | A>C | No |
ClinGen ExAC gnomAD |
|
|
rs750580366 CA3673188 |
514 | A>W | No |
ClinGen ExAC gnomAD |
No associated diseases with O00481
14 regional properties for O00481
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | B30.2/SPRY domain | 322 - 513 | IPR001870 |
| domain | Immunoglobulin subtype | 37 - 144 | IPR003599 |
| domain | SPRY domain | 392 - 513 | IPR003877 |
| domain | Butyrophylin-like, SPRY domain | 338 - 355 | IPR003879-1 |
| domain | Butyrophylin-like, SPRY domain | 355 - 372 | IPR003879-2 |
| domain | Butyrophylin-like, SPRY domain | 377 - 401 | IPR003879-3 |
| domain | Butyrophylin-like, SPRY domain | 407 - 420 | IPR003879-4 |
| domain | Butyrophylin-like, SPRY domain | 451 - 475 | IPR003879-5 |
| domain | Butyrophylin-like, SPRY domain | 482 - 500 | IPR003879-6 |
| domain | SPRY-associated | 339 - 391 | IPR006574 |
| domain | Immunoglobulin-like domain | 26 - 139 | IPR007110-1 |
| domain | Immunoglobulin-like domain | 164 - 236 | IPR007110-2 |
| domain | Immunoglobulin V-set domain | 37 - 143 | IPR013106 |
| domain | Butyrophilin subfamily 3, PRY/SPRY domain | 337 - 512 | IPR037954 |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| external side of plasma membrane | The leaflet of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| signaling receptor binding | Binding to one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function. |
6 GO annotations of biological process
| Name | Definition |
|---|---|
| activated T cell proliferation | The expansion of a T cell population following activation by an antigenic stimulus. |
| adaptive immune response | An immune response mediated by cells expressing specific receptors for antigen produced through a somatic diversification process, and allowing for an enhanced secondary response to subsequent exposures to the same antigen (immunological memory). |
| positive regulation of cytokine production | Any process that activates or increases the frequency, rate or extent of production of a cytokine. |
| positive regulation of interferon-gamma production | Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon. |
| regulation of cytokine production | Any process that modulates the frequency, rate, or extent of production of a cytokine. |
| T cell receptor signaling pathway | The series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKMASFLAFL | LLNFRVCLLL | LQLLMPHSAQ | FSVLGPSGPI | LAMVGEDADL | PCHLFPTMSA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| ETMELKWVSS | SLRQVVNVYA | DGKEVEDRQS | APYRGRTSIL | RDGITAGKAA | LRIHNVTASD |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SGKYLCYFQD | GDFYEKALVE | LKVAALGSDL | HVDVKGYKDG | GIHLECRSTG | WYPQPQIQWS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| NNKGENIPTV | EAPVVADGVG | LYAVAASVIM | RGSSGEGVSC | TIRSSLLGLE | KTASISIADP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| FFRSAQRWIA | ALAGTLPVLL | LLLGGAGYFL | WQQQEEKKTQ | FRKKKREQEL | REMAWSTMKQ |
| 310 | 320 | 330 | 340 | 350 | 360 |
| EQSTRVKLLE | ELRWRSIQYA | SRGERHSAYN | EWKKALFKPA | DVILDPKTAN | PILLVSEDQR |
| 370 | 380 | 390 | 400 | 410 | 420 |
| SVQRAKEPQD | LPDNPERFNW | HYCVLGCESF | ISGRHYWEVE | VGDRKEWHIG | VCSKNVQRKG |
| 430 | 440 | 450 | 460 | 470 | 480 |
| WVKMTPENGF | WTMGLTDGNK | YRTLTEPRTN | LKLPKPPKKV | GVFLDYETGD | ISFYNAVDGS |
| 490 | 500 | 510 | |||
| HIHTFLDVSF | SEALYPVFRI | LTLEPTALTI | CPA |