P49418
Gene name |
AMPH (AMPH1) |
Protein name |
Amphiphysin |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:273 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
7 structures for P49418
538 variants for P49418
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1272212698 CA367297547 |
4 | I>M | No |
ClinGen gnomAD |
|
| TCGA novel | 6 | T>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA367297529 rs1340861928 |
7 | G>V | No |
ClinGen gnomAD |
|
|
CA367297525 rs1453668474 |
8 | I>V | No |
ClinGen TOPMed |
|
|
rs1361967763 CA367297517 |
9 | F>V | No |
ClinGen TOPMed |
|
|
rs1438502684 CA367297510 |
10 | A>D | No |
ClinGen gnomAD |
|
|
rs749611316 CA367297511 |
10 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs749611316 CA4226136 |
10 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs749611316 CA4226137 |
10 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA4226135 rs780415781 |
13 | V>F | No |
ClinGen ExAC gnomAD |
|
|
rs868741417 COSM291105 CA157581852 |
16 | R>* | large_intestine [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs1157786301 CA367297456 |
18 | N>S | No |
ClinGen gnomAD |
|
|
CA367297451 rs1167469290 |
19 | R>C | No |
ClinGen gnomAD |
|
|
rs1443014571 CA367281277 |
24 | V>D | No |
ClinGen TOPMed |
|
|
rs1325755200 CA367281280 |
24 | V>F | No |
ClinGen gnomAD |
|
|
CA4226122 rs767485784 |
25 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA157571202 COSM3768363 rs943386903 |
27 | K>N | liver [Cosmic] | No |
ClinGen cosmic curated Ensembl |
| TCGA novel | 31 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4226119 rs141452785 |
32 | D>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1225296606 CA367281080 |
35 | K>E | No |
ClinGen gnomAD |
|
|
CA367281047 rs1234092625 |
37 | E>A | No |
ClinGen gnomAD |
|
|
CA157571200 rs771742587 |
37 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs544763333 CA157571199 |
38 | Q>L | No |
ClinGen gnomAD |
|
|
rs781682680 COSM1089484 CA4226114 |
40 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 41 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1562812789 CA367280985 |
45 | N>K | No |
ClinGen Ensembl |
|
|
rs956339668 CA157571198 |
45 | N>S | No |
ClinGen TOPMed |
|
|
rs1157638223 CA367280972 |
47 | K>E | No |
ClinGen gnomAD |
|
|
rs1419555499 CA367280963 |
48 | R>Q | No |
ClinGen gnomAD |
|
|
rs147234401 CA4226109 RCV000896600 |
48 | R>W | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs968924078 CA157571197 |
49 | Q>H | No |
ClinGen Ensembl |
|
| TCGA novel | 50 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA157571196 rs1023213322 |
50 | E>K | No |
ClinGen Ensembl |
|
|
rs1354574545 CA367286756 |
51 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1396277693 CA367286749 |
51 | A>V | No |
ClinGen gnomAD |
|
|
CA4226097 rs776892631 |
53 | G>C | No |
ClinGen ExAC gnomAD |
|
|
rs1460488669 CA367286706 |
54 | T>I | No |
ClinGen gnomAD |
|
|
rs1195839874 CA367286668 |
56 | L>R | No |
ClinGen gnomAD |
|
|
CA4226096 rs771517892 COSM1450617 |
58 | R>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs747570486 CA4226095 COSM231746 |
58 | R>Q | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA4226094 rs778537683 |
60 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA4226093 rs760489841 |
61 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1562795330 CA367286592 |
62 | G>E | No |
ClinGen Ensembl |
|
|
rs779702988 CA4226091 |
69 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA367284356 rs1405711446 |
69 | G>D | No |
ClinGen TOPMed |
|
|
CA4226064 COSM3381911 rs758290306 |
70 | M>T | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1167240285 CA367284347 |
70 | M>V | No |
ClinGen TOPMed |
|
|
CA367284308 rs1462816483 |
71 | Q>R | No |
ClinGen gnomAD |
|
|
CA367284237 rs1200233934 |
73 | A>V | No |
ClinGen Ensembl |
|
|
CA4226063 rs535127955 |
74 | S>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4226062 rs780685813 |
75 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754062522 CA4226060 |
78 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 79 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4226058 rs761049841 |
80 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4226054 rs775046404 |
85 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA367283962 rs1187252662 |
86 | E>V | No |
ClinGen gnomAD |
|
| TCGA novel | 87 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745531224 CA4226052 |
91 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs200060107 CA4226050 |
92 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1728761 rs776200425 CA4226051 |
92 | R>W | liver [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA4226049 rs746757970 |
94 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4226048 rs777574619 |
95 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs569700463 CA157220929 |
98 | V>A | No |
ClinGen 1000Genomes |
|
|
rs546244149 CA4226036 |
101 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs773050809 CA157219150 |
102 | C>R | No |
ClinGen Ensembl |
|
|
CA157219148 rs979222143 |
102 | C>Y | No |
ClinGen Ensembl |
|
|
CA367282991 rs1250506900 |
103 | D>E | No |
ClinGen gnomAD |
|
|
CA367282989 rs1234655947 |
104 | V>M | No |
ClinGen gnomAD |
|
|
rs1352953228 CA367282980 |
105 | L>P | No |
ClinGen gnomAD |
|
| TCGA novel | 107 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4226034 rs776141913 |
108 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs866081871 CA157219144 |
109 | F>L | No |
ClinGen TOPMed |
|
|
rs947510100 CA157219138 |
110 | H>R | No |
ClinGen Ensembl |
|
|
CA4226033 rs529727341 |
110 | H>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1167299845 CA367282911 COSM238775 |
114 | V>M | Variant assessed as Somatic; 0.0 impact. central_nervous_system prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA367282895 rs1459949553 |
115 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1338903221 CA367282887 |
116 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1194550037 CA367282852 |
119 | L>I | No |
ClinGen gnomAD |
|
| TCGA novel | 119 | L>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs772967761 CA4226030 |
122 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA367282799 rs1315626119 |
123 | T>I | No |
ClinGen gnomAD |
|
| TCGA novel | 126 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 126 | G>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771817752 CA4226029 |
127 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs748110437 CA4226028 |
131 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778645184 CA4226027 |
131 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs138538388 CA4226011 |
133 | N>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4226009 COSM3229273 rs370790138 |
134 | R>C | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA gnomAD |
|
rs1272402161 CA367280773 |
134 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1272402161 CA367280769 |
134 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA4226010 rs370790138 |
134 | R>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA4226008 rs199508672 |
135 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367280750 rs1199538704 |
136 | A>T | No |
ClinGen TOPMed |
|
|
CA367280742 rs1256407792 |
136 | A>V | No |
ClinGen TOPMed |
|
|
rs147124840 CA157212752 |
137 | K>Q | No |
ClinGen ESP |
|
|
rs1348357360 COSM1568997 CA367280725 |
138 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs375161752 CA157212745 COSM3412022 |
138 | R>H | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP NCI-TCGA TOPMed gnomAD |
| TCGA novel | 140 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781216086 CA4226003 |
145 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367280578 rs1440266958 |
149 | R>C | No |
ClinGen TOPMed |
|
|
COSM187265 CA4226002 rs768583906 |
149 | R>H | large_intestine Variant assessed as Somatic; 4.621e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
| TCGA novel | 150 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA157212703 rs149399933 |
153 | E>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs778240666 CA4226000 |
154 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA4225999 rs758879636 |
157 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA367280408 rs1375730206 |
158 | S>P | No |
ClinGen TOPMed |
|
| TCGA novel | 160 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1173442390 CA367280282 |
163 | E>D | No |
ClinGen TOPMed |
|
|
rs533242701 CA4225997 |
163 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4225996 rs764670438 |
164 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367280261 rs1203787059 |
165 | R>* | No |
ClinGen gnomAD |
|
|
CA157212681 rs1032416581 |
165 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs749960340 CA4225995 |
166 | I>V | No |
ClinGen ExAC |
|
|
rs370453880 CA4225994 |
167 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs776550761 CA4225967 |
171 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA367279628 rs1472453936 |
172 | E>* | No |
ClinGen gnomAD |
|
|
rs771100487 CA4225966 |
172 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs747190388 CA4225965 |
173 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4225964 rs773354632 |
174 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs772291381 CA4225963 |
175 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA4225962 rs199555769 |
178 | K>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs779276534 CA4225961 |
180 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
rs755442696 CA4225960 |
182 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA4225958 rs138907301 COSM1580475 |
185 | V>I | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1364838408 CA367279530 |
186 | D>N | No |
ClinGen gnomAD |
|
|
CA157211984 rs267601510 |
189 | E>K | No |
ClinGen Ensembl |
|
|
rs1174104021 CA367292462 COSM1089480 |
198 | R>* | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs749621749 CA4225940 |
201 | F>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367292381 rs1329521820 |
203 | V>A | No |
ClinGen TOPMed |
|
|
rs770227233 CA4225938 |
204 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA367292366 rs1470572108 |
204 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs746489891 CA4225937 |
206 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs150251325 CA4225936 |
207 | K>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 209 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200247377 CA4225934 |
209 | V>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200247377 CA4225933 |
209 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1373584203 CA367292290 |
213 | E>G | No |
ClinGen gnomAD |
|
|
rs201267643 CA4225932 |
217 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
VAR_053004 CA157248849 rs35166354 |
218 | K>E | No |
ClinGen UniProt Ensembl dbSNP |
|
|
rs768225866 COSM1580474 CA4225931 |
221 | A>V | Variant assessed as Somatic; 0.0 impact. haematopoietic_and_lymphoid_tissue [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA367292098 rs1400266172 |
224 | C>F | No |
ClinGen gnomAD |
|
|
rs371631099 CA157248326 |
225 | H>Q | No |
ClinGen Ensembl |
|
|
rs753625617 CA4225914 |
229 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768725560 CA367291998 |
230 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA157248304 rs768725560 |
230 | V>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 234 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA157248285 rs547228202 |
235 | G>S | No |
ClinGen Ensembl |
|
| TCGA novel | 236 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4225912 rs756052300 |
237 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs140760246 CA4225911 |
238 | H>Y | No |
ClinGen ESP ExAC gnomAD |
|
|
CA157248237 rs867699717 |
239 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA367291863 rs867699717 |
239 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs751664082 CA4225908 |
240 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367291792 rs764338468 |
242 | A>S | No |
ClinGen ExAC TOPMed |
|
|
CA4225907 rs764338468 |
242 | A>T | No |
ClinGen ExAC TOPMed |
|
|
CA4225906 rs374663206 |
248 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM77259 CA4225903 rs760115221 |
249 | P>S | ovary [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs369136799 CA4225857 |
250 | S>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs776397586 CA4225855 |
252 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4225853 rs746826863 |
254 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA157246399 rs993439466 |
254 | P>L | No |
ClinGen Ensembl |
|
|
CA4225852 rs777511764 |
256 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA367290670 rs777511764 |
256 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs772069356 CA4225851 |
256 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs772069356 CA367290666 |
256 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367290655 rs1244528324 |
257 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA4225850 rs748136267 |
259 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs560808720 COSM1450614 CA4225846 |
263 | P>L | Variant assessed as Somatic; 0.0 impact. large_intestine central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 264 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs750823823 CA4225844 |
267 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs767876446 CA4225843 |
269 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs376003397 CA157246327 |
270 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4225841 rs376003397 |
270 | L>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA157246328 rs376003397 |
270 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4225840 rs540619394 |
271 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA157246322 rs540619394 |
271 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1447929216 CA367290471 |
272 | S>N | No |
ClinGen gnomAD |
|
|
CA367290453 COSM138615 rs571506461 |
273 | P>L | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA4225839 rs571506461 |
273 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA367290441 rs1284415051 |
274 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA4225837 rs770582455 |
275 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA367290427 rs1272207754 |
276 | S>G | No |
ClinGen TOPMed |
|
|
rs144982032 CA4225836 |
277 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1232831303 CA367290399 |
278 | N>H | No |
ClinGen TOPMed |
|
|
rs773090034 CA4225835 |
279 | H>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 282 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4225833 rs748161905 |
283 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA4225832 rs779118225 |
284 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs368302578 COSM746963 CA4225829 |
287 | A>T | lung Variant assessed as Somatic; 0.0 impact. endometrium [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 288 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4225827 rs746190586 |
288 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781660370 CA4225826 |
289 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs147284975 CA4225822 |
290 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1450612 CA4225823 rs112872886 |
290 | R>W | pancreas large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA4225819 rs139909342 |
292 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs151055033 COSM173264 CA4225820 |
292 | R>W | lung Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA367290186 rs1233049719 |
293 | S>L | No |
ClinGen gnomAD |
|
|
CA367290198 rs1320053430 |
293 | S>P | No |
ClinGen TOPMed |
|
|
rs376969284 CA4225818 |
294 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs767399373 CA4225817 |
296 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA367289436 rs1254597855 |
298 | R>K | No |
ClinGen gnomAD |
|
|
rs1254597855 CA367289435 |
298 | R>T | No |
ClinGen gnomAD |
|
|
CA157244945 rs1005752506 |
301 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA367289318 rs1238462562 |
301 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA157244931 rs1049620138 |
302 | P>R | No |
ClinGen Ensembl |
|
|
CA4225804 rs753314715 |
302 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA157244937 rs753314715 |
302 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367289257 rs1313652435 |
303 | V>L | No |
ClinGen gnomAD |
|
|
CA367289247 rs1276047312 |
304 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA4225801 rs750152707 |
305 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA4225802 rs755704877 |
305 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA157244886 rs1040956573 |
308 | K>E | No |
ClinGen gnomAD |
|
|
rs1040956573 CA367289190 |
308 | K>Q | No |
ClinGen gnomAD |
|
|
CA367289133 rs1336249940 |
310 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA367289138 rs1336249940 |
310 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA4225796 rs374682461 |
311 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 311 | P>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA367289117 rs1304933126 |
312 | T>A | No |
ClinGen gnomAD |
|
|
CA4225793 rs370918715 |
315 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1584121572 CA367289024 |
316 | Q>* | No |
ClinGen Ensembl |
|
|
rs776857039 CA4225792 |
316 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA4225790 rs747333756 |
322 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs752832834 CA4225789 |
324 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1313070 rs202128772 CA4225788 |
325 | E>K | urinary_tract [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA367288904 rs1465052975 |
326 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs550814285 CA367288892 |
327 | N>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA367288894 rs1408270664 |
327 | N>S | No |
ClinGen gnomAD |
|
|
rs1316327843 CA367288857 |
332 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
rs749912284 CA4225784 |
333 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA4225783 rs148381298 |
334 | V>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA367288837 rs1376643303 |
335 | T>R | No |
ClinGen gnomAD |
|
|
CA4225781 rs751381263 |
336 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA367288827 COSM1549902 rs1391062409 |
337 | P>H | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1391062409 CA367288825 |
337 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1173478637 CA367288828 |
337 | P>S | No |
ClinGen TOPMed |
|
|
CA367288821 rs1223933526 |
338 | S>F | No |
ClinGen gnomAD |
|
|
rs764043467 CA4225780 |
339 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1007616757 CA157223689 |
340 | N>S | No |
ClinGen TOPMed |
|
|
rs751328002 CA4225761 |
343 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs758210193 CA4225759 |
345 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 346 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs948083184 CA157223663 |
347 | K>E | No |
ClinGen TOPMed |
|
|
rs752458751 CA4225758 |
347 | K>I | No |
ClinGen ExAC gnomAD |
|
|
CA4225757 rs765183592 |
348 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1290928640 CA367286320 |
349 | E>K | No |
ClinGen gnomAD |
|
|
CA367286317 rs1290928640 |
349 | E>Q | No |
ClinGen gnomAD |
|
|
CA157223658 rs139241910 COSM106367 |
353 | D>N | skin [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs766503060 CA4225754 |
354 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA157223641 rs530978593 |
355 | D>N | No |
ClinGen 1000Genomes |
|
|
rs1051637568 CA157223632 |
358 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
COSM3832751 rs773352593 CA4225752 |
359 | F>L | breast [Cosmic] | No |
ClinGen cosmic curated ExAC |
| TCGA novel | 361 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4225750 rs762186644 |
362 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367286110 rs1412104437 |
363 | V>L | No |
ClinGen gnomAD |
|
|
CA4225749 rs376578741 |
365 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4225748 rs769186615 |
366 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1377835683 CA367286029 |
367 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs776281084 CA4225746 |
367 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA4225747 rs776281084 |
367 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA4225745 rs770499948 |
368 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA367286023 rs1177674042 |
368 | S>T | No |
ClinGen gnomAD |
|
|
CA4225744 rs746532210 |
369 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs939391412 CA157223583 |
370 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1443927075 CA367285956 |
371 | V>A | No |
ClinGen TOPMed |
|
|
CA4225743 rs777520653 |
372 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA4225742 rs142962296 |
374 | S>L | No |
ClinGen ESP ExAC TOPMed |
|
|
VAR_053005 CA4225737 rs17171345 CA4225738 RCV000956475 |
376 | M>I | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4225739 rs754929044 |
376 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754929044 CA4225740 |
376 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756125220 CA4225736 |
378 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA367285798 rs1468868996 |
378 | Q>R | No |
ClinGen TOPMed |
|
|
CA367284855 rs1349118972 |
379 | T>I | No |
ClinGen TOPMed |
|
|
CA4225724 rs771732083 |
379 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1562750780 CA367284841 |
380 | L>F | No |
ClinGen Ensembl |
|
| TCGA novel | 382 | W>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4225723 rs759201734 |
383 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA157220310 rs140222015 |
385 | W>* | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs866753134 CA157220315 |
385 | W>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| rs754663057 | 386 | T>= | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4225722 rs200697979 RCV000897618 |
386 | T>M | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA4225687 rs766923131 |
387 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA4225686 rs761175828 |
388 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA367283858 rs1172238298 |
388 | S>N | No |
ClinGen gnomAD |
|
|
rs773940510 CA4225685 |
391 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA4225684 rs558022203 |
392 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs762654210 CA4225683 |
393 | Q>* | No |
ClinGen ExAC gnomAD |
|
| rs936634704 | 394 | P>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4225682 rs138512950 |
394 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 395 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs371065137 CA4225561 |
398 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA367283032 rs1444808020 |
403 | F>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 405 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1451013761 CA367282503 |
406 | P>A | No |
ClinGen TOPMed |
|
|
rs760933532 CA4225548 |
409 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA367282466 rs760933532 |
409 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA4225545 rs139811167 |
410 | S>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4225544 rs774660949 |
414 | M>R | No |
ClinGen ExAC gnomAD |
|
|
CA4225542 rs745342103 |
417 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367282374 rs1425001201 |
417 | D>G | No |
ClinGen gnomAD |
|
|
rs769320049 CA4225543 |
417 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA367282349 rs1458024151 |
419 | S>N | No |
ClinGen gnomAD |
|
|
rs1348770405 CA367282328 |
420 | M>I | No |
ClinGen gnomAD |
|
|
CA4225522 rs760249336 |
425 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA367281580 rs1281188461 |
426 | E>D | No |
ClinGen TOPMed |
|
|
CA4225521 rs772695203 |
427 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA4225520 rs771785238 |
428 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs1005453871 CA367281538 |
429 | Q>E | No |
ClinGen TOPMed |
|
|
rs1005453871 CA157209907 |
429 | Q>K | No |
ClinGen TOPMed |
|
|
CA157209899 rs891387766 |
429 | Q>R | No |
ClinGen Ensembl |
|
|
CA4225519 rs747862983 |
430 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA157209894 rs150091535 |
430 | A>V | No |
ClinGen ESP TOPMed |
|
|
CA367281504 rs1300102066 |
431 | P>S | Variant assessed as Somatic; 4.622e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
| TCGA novel | 431 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs768564392 CA4225517 |
432 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs768564392 CA4225516 |
432 | P>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 434 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs925119015 CA157209881 |
435 | P>Q | No |
ClinGen Ensembl |
|
|
CA4225514 rs779971440 |
437 | A>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 438 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1446025850 CA367281389 |
440 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs756088309 CA4225513 |
440 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750537808 CA4225512 |
441 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1267673472 CA367281378 |
442 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1584062267 CA367281346 |
444 | V>A | No |
ClinGen Ensembl |
|
|
CA367281336 rs1562739584 |
445 | T>K | No |
ClinGen Ensembl |
|
|
rs757550847 CA4225510 |
445 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs1441744902 CA367281301 |
447 | A>V | No |
ClinGen gnomAD |
|
|
CA4225506 rs373071104 |
448 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1584062211 CA367281251 |
451 | D>N | No |
ClinGen Ensembl |
|
|
rs140860940 CA4225505 |
453 | G>E | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1447805665 CA367281198 |
454 | M>T | No |
ClinGen TOPMed |
|
|
rs1258822375 CA367281207 |
454 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA367281180 rs1199112654 |
455 | D>V | No |
ClinGen gnomAD |
|
|
CA367281174 rs1483153935 |
456 | T>A | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 456 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4225502 rs771596953 |
457 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201059599 CA4225503 |
457 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761580305 CA4225501 |
460 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1341030537 CA367281109 |
462 | V>M | No |
ClinGen gnomAD |
|
| TCGA novel | 463 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759911669 CA157209735 |
464 | E>A | No |
ClinGen Ensembl |
|
|
CA4225499 rs768373657 |
465 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 465 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1298578737 CA367281060 |
466 | V>G | No |
ClinGen gnomAD |
|
|
rs1389724934 CA367292845 |
467 | I>F | No |
ClinGen TOPMed |
|
|
CA4225477 rs776438912 |
467 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs969901002 CA157219197 |
468 | I>V | No |
ClinGen Ensembl |
|
|
CA367292831 rs1268918230 |
469 | P>H | No |
ClinGen gnomAD |
|
|
CA367292830 rs1268918230 |
469 | P>L | No |
ClinGen gnomAD |
|
|
rs1023706899 CA157219191 |
470 | G>R | No |
ClinGen Ensembl |
|
|
CA367292824 rs1207484675 |
471 | A>T | No |
ClinGen gnomAD |
|
|
rs115462490 CA4225476 |
473 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1385058480 CA367292800 |
474 | D>E | No |
ClinGen TOPMed |
|
|
CA157219172 rs960856901 |
474 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs747112662 CA367292794 |
475 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1220367001 CA367292797 |
475 | A>T | No |
ClinGen gnomAD |
|
|
CA4225475 rs747112662 |
475 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1269368587 CA367292790 |
476 | A>D | No |
ClinGen gnomAD |
|
|
rs369724143 CA4225474 |
477 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1332990833 CA367292777 |
478 | G>V | No |
ClinGen gnomAD |
|
|
rs1321677418 CA367292771 |
479 | T>I | No |
ClinGen gnomAD |
|
|
rs1401696003 CA367292746 |
483 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA4225473 RCV000906272 rs73348825 |
484 | A>S | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4225472 rs748496739 COSM387751 |
485 | E>D | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA367292723 rs1235790854 |
487 | A>G | No |
ClinGen TOPMed |
|
|
CA157219161 rs371720416 |
488 | P>T | No |
ClinGen ESP TOPMed |
|
|
rs779630927 CA157219157 |
489 | G>R | No |
ClinGen Ensembl |
|
|
CA157219152 rs1049179766 |
491 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA4225469 rs754303145 |
493 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA367292679 rs766808058 |
494 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM292289 rs766808058 CA4225468 |
494 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
VAR_053006 CA4225466 rs35024632 |
496 | K>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA367292656 rs1469891829 |
498 | T>A | No |
ClinGen TOPMed |
|
|
rs147689642 CA4225465 |
499 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA367292651 rs147689642 |
499 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA157219142 rs375211709 |
500 | P>A | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA367292643 rs1377795606 |
500 | P>R | No |
ClinGen gnomAD |
|
|
CA4225461 COSM1549904 rs759265550 |
502 | G>R | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA367292627 rs1164154160 |
503 | E>A | No |
ClinGen TOPMed |
|
|
rs1456162678 CA367292630 |
503 | E>K | No |
ClinGen TOPMed |
|
|
TCGA novel rs764644221 |
503 | E>K | Variant assessed as Somatic; impact. Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 505 | V>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1584032270 CA367292610 |
506 | S>C | No |
ClinGen Ensembl |
|
|
rs1584032265 CA367292606 |
506 | S>T | No |
ClinGen Ensembl |
|
|
rs770809668 CA4225458 |
507 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760810044 CA4225457 |
509 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs574824661 CA157219129 |
510 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs778203010 CA4225455 |
515 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA157219127 rs868075632 |
516 | T>I | No |
ClinGen Ensembl |
|
|
rs1297230588 CA367292533 |
517 | T>I | No |
ClinGen TOPMed |
|
| TCGA novel | 519 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA157219102 rs935875007 |
519 | G>V | No |
ClinGen gnomAD |
|
|
rs1274362380 CA367292513 |
520 | A>G | No |
ClinGen TOPMed |
|
|
CA157219098 rs925841682 |
520 | A>T | No |
ClinGen TOPMed |
|
|
CA367292503 rs1443979345 |
522 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
rs769006294 CA4225452 |
524 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA4225450 rs780570325 |
526 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1301073031 CA367292419 |
530 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
COSM3431584 CA4225448 rs367689186 |
531 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4225449 rs367689186 |
531 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA157219079 rs372103091 |
533 | T>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA367292378 rs1450777169 |
534 | V>L | No |
ClinGen gnomAD |
|
|
rs965020082 CA157219078 |
536 | Q>* | No |
ClinGen TOPMed |
|
|
rs1265019164 CA367291774 |
537 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 538 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4225428 rs746308598 |
539 | V>D | No |
ClinGen ExAC gnomAD |
|
|
rs781674313 CA4225427 |
541 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA4225426 rs757857975 |
542 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752182613 CA4225425 |
543 | V>E | No |
ClinGen ExAC gnomAD |
|
|
CA4225424 rs200653835 |
545 | I>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4225423 rs200653835 |
545 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1257054366 CA367291618 |
546 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA367291601 rs1380232465 |
547 | P>S | No |
ClinGen gnomAD |
|
|
CA157218131 rs1040618691 |
548 | A>G | No |
ClinGen TOPMed |
|
|
CA4225422 rs753650937 |
548 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367291573 rs1487482886 |
549 | S>Y | No |
ClinGen TOPMed |
|
| TCGA novel | 551 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1391621108 CA367291547 |
551 | H>R | No |
ClinGen gnomAD |
|
|
rs750325763 CA4225419 |
553 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA4225418 rs767583066 |
554 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs555399483 CA4225417 |
556 | E>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4225416 rs764354748 |
557 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA4225413 rs372537853 |
558 | E>* | No |
ClinGen ESP ExAC gnomAD |
|
|
CA367291466 rs770087957 |
558 | E>D | No |
ClinGen ExAC gnomAD |
|
|
COSM138613 rs372537853 CA4225414 |
558 | E>K | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA gnomAD |
|
CA4225411 rs746255256 |
559 | I>K | No |
ClinGen ExAC gnomAD |
|
|
CA157218092 rs775256845 |
559 | I>L | No |
ClinGen Ensembl |
|
|
CA4225410 rs777086329 |
560 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA367291446 rs777086329 |
560 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA367291443 rs1161595313 |
561 | I>V | No |
ClinGen TOPMed |
|
|
rs1562722039 CA367291430 |
562 | G>C | No |
ClinGen Ensembl |
|
|
CA367291421 rs1256578835 |
563 | A>T | No |
ClinGen gnomAD |
|
|
CA367291389 rs1227070067 |
566 | K>E | No |
ClinGen gnomAD |
|
|
CA367291372 rs1296265137 |
567 | E>G | No |
ClinGen gnomAD |
|
|
rs778340619 CA4225407 |
568 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs747675365 CA4225408 |
568 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA157218074 rs929702641 |
570 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA4225405 COSM1742754 rs748822925 |
570 | E>K | biliary_tract Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs144661060 CA367291321 |
572 | A>P | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs144661060 CA157218071 |
572 | A>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1341123866 COSM1488539 CA367291315 |
572 | A>V | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1461251500 CA367291311 |
573 | A>T | No |
ClinGen gnomAD |
|
|
rs1354995443 CA367291296 |
574 | P>L | No |
ClinGen TOPMed |
|
|
CA367291300 rs1281965723 |
574 | P>S | No |
ClinGen TOPMed |
|
|
rs372460888 CA4225403 |
575 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 575 | P>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1178556773 CA367291277 |
576 | G>V | No |
ClinGen gnomAD |
|
|
rs750272675 CA367291248 |
579 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs750272675 CA4225402 |
579 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs767529926 CA4225401 |
580 | E>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 580 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs139940640 CA4225400 |
581 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4225398 rs764013614 |
582 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs764013614 CA367291220 |
582 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4225399 rs751656285 |
582 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs751656285 CA367291224 |
582 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA367291212 rs1473134719 |
583 | E>A | No |
ClinGen TOPMed |
|
|
rs1212644109 CA367291199 |
584 | L>P | No |
ClinGen gnomAD |
|
|
rs1345218445 CA367291196 |
585 | A>T | No |
ClinGen gnomAD |
|
|
CA4225393 rs142938499 RCV000883077 |
586 | T>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs773769228 CA4225390 |
588 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA367291131 rs1419316426 |
590 | P>L | No |
ClinGen TOPMed |
|
|
rs767991097 CA4225389 |
591 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1562721753 CA367291114 |
593 | D>Y | No |
ClinGen Ensembl |
|
|
rs1304355821 CA367291107 |
594 | P>S | No |
ClinGen gnomAD |
|
|
rs138437054 CA367291099 |
595 | Q>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs138437054 CA4225387 |
595 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 597 | T>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA367291089 rs1584028721 |
597 | T>P | No |
ClinGen Ensembl |
|
| TCGA novel | 599 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1181799658 CA367291077 |
599 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
CA4225382 rs745635746 |
599 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
rs953933521 CA157217948 |
600 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs953933521 CA157217958 |
600 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1484502956 CA367291066 |
601 | P>S | No |
ClinGen gnomAD |
|
|
rs1012193424 CA157217943 |
603 | M>I | No |
ClinGen Ensembl |
|
|
CA367291052 rs1279102063 |
603 | M>T | No |
ClinGen gnomAD |
|
|
rs764115727 COSM3778424 CA4225377 |
607 | D>G | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed |
|
rs752817299 CA4225375 |
608 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367290991 rs1340931972 |
608 | Q>R | No |
ClinGen gnomAD |
|
| TCGA novel | 612 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA367290949 rs1584028607 |
612 | A>V | No |
ClinGen Ensembl |
|
|
rs138082297 CA4225373 |
614 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA367290918 rs1236411397 |
615 | A>D | No |
ClinGen TOPMed |
|
|
rs754193962 CA4225372 |
616 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367290900 rs766581511 |
617 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA4225371 rs766581511 |
617 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs780392713 CA4225370 |
619 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA367290858 rs1380712286 |
620 | P>R | No |
ClinGen TOPMed |
|
|
CA4225369 rs183053116 |
620 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4225368 rs772663774 |
621 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1458866835 CA367290791 |
626 | K>E | No |
ClinGen gnomAD |
|
| rs1476193041 | 627 | V>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4225351 rs750837865 |
628 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA157217066 rs964117064 |
633 | F>L | No |
ClinGen TOPMed |
|
|
rs1562720405 CA367289837 |
633 | F>S | No |
ClinGen Ensembl |
|
|
rs377538910 CA4225350 |
635 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs762466435 CA4225349 |
636 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1254303502 CA367289780 |
637 | N>S | No |
ClinGen gnomAD |
|
| TCGA novel | 638 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA367289735 rs1211800333 |
639 | D>E | No |
ClinGen gnomAD |
|
|
CA157217058 rs200109991 |
640 | E>K | No |
ClinGen Ensembl |
|
|
rs775135384 CA4225348 |
642 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1258466569 CA367289645 |
645 | R>M | No |
ClinGen gnomAD |
|
|
rs1216062938 CA367289637 |
646 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA157217053 rs867571728 |
646 | G>V | No |
ClinGen Ensembl |
|
|
CA367289603 rs1172323607 |
648 | V>L | No |
ClinGen TOPMed |
|
| TCGA novel | 649 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4225345 rs776108511 |
653 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1373370384 CA367289333 |
659 | D>Y | No |
ClinGen gnomAD |
|
|
CA4225343 rs746760641 |
660 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746760641 CA367289319 |
660 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1366899987 CA367289305 |
660 | Q>P | No |
ClinGen TOPMed |
|
|
CA4225329 rs372846915 |
661 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs941969479 CA157214993 |
661 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA157214966 rs955822500 |
663 | G>D | No |
ClinGen TOPMed |
|
|
rs765936626 CA4225326 |
666 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs776256855 COSM601143 CA4225327 |
666 | V>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs760445860 CA4225325 |
675 | Q>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4225324 rs147019216 |
675 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs968229836 CA157214946 |
679 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1030521865 CA367288482 |
681 | T>N | No |
ClinGen TOPMed |
|
|
rs1030521865 CA157214943 |
681 | T>S | No |
ClinGen TOPMed |
|
|
CA367288477 rs1408034829 |
682 | Y>D | No |
ClinGen gnomAD |
|
|
rs774229014 CA4225321 |
683 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA4225320 rs768617715 |
683 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs780237235 CA4225318 |
684 | G>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs780237235 CA4225319 |
684 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4225317 rs756285958 |
685 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs746035552 CA4225316 |
686 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
rs781587480 CA4225315 |
687 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4225313 rs746689644 |
692 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746689644 CA367288367 |
692 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4225312 rs764677540 |
692 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM453020 rs147817118 CA4225311 |
693 | R>C | haematopoietic_and_lymphoid_tissue breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs758026337 CA4225310 |
693 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758026337 CA157214908 |
693 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4225309 rs765852492 |
694 | L>F | No |
ClinGen ExAC gnomAD |
No associated diseases with P49418
Functions
7 GO annotations of cellular component
| Name | Definition |
|---|---|
| actin cytoskeleton | The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes. |
| anchoring junction | A cell junction that mechanically attaches a cell (and its cytoskeleton) to neighboring cells or to the extracellular matrix. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| leading edge membrane | The portion of the plasma membrane surrounding the leading edge of a motile cell. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| synaptic vesicle | A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane. |
| synaptic vesicle membrane | The lipid bilayer surrounding a synaptic vesicle. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| phospholipid binding | Binding to a phospholipid, a class of lipids containing phosphoric acid as a mono- or diester. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| chemical synaptic transmission | The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse. |
| endocytosis | A vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle. |
| synaptic vesicle endocytosis | A vesicle-mediated transport process, in which the synaptic vesicle membrane constituents are retrieved from the presynaptic membrane on the axon terminal after neurotransmitter secretion by exocytosis. Synaptic vesicle endocytosis can occur via clathrin-dependent and clathrin-independent mechanisms. |
7 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P50478 | AMPH | Amphiphysin | Gallus gallus (Chicken) | PR |
| Q9UBW5 | BIN2 | Bridging integrator 2 | Homo sapiens (Human) | PR |
| O00499 | BIN1 | Myc box-dependent-interacting protein 1 | Homo sapiens (Human) | PR |
| O08539 | Bin1 | Myc box-dependent-interacting protein 1 | Mus musculus (Mouse) | PR |
| Q7TQF7 | Amph | Amphiphysin | Mus musculus (Mouse) | PR |
| O08839 | Bin1 | Myc box-dependent-interacting protein 1 | Rattus norvegicus (Rat) | PR |
| O08838 | Amph | Amphiphysin | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MADIKTGIFA | KNVQKRLNRA | QEKVLQKLGK | ADETKDEQFE | EYVQNFKRQE | AEGTRLQREL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RGYLAAIKGM | QEASMKLTES | LHEVYEPDWY | GREDVKMVGE | KCDVLWEDFH | QKLVDGSLLT |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LDTYLGQFPD | IKNRIAKRSR | KLVDYDSARH | HLEALQSSKR | KDESRISKAE | EEFQKAQKVF |
| 190 | 200 | 210 | 220 | 230 | 240 |
| EEFNVDLQEE | LPSLWSRRVG | FYVNTFKNVS | SLEAKFHKEI | AVLCHKLYEV | MTKLGDQHAD |
| 250 | 260 | 270 | 280 | 290 | 300 |
| KAFTIQGAPS | DSGPLRIAKT | PSPPEEPSPL | PSPTASPNHT | LAPASPAPAR | PRSPSQTRKG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| PPVPPLPKVT | PTKELQQENI | ISFFEDNFVP | EISVTTPSQN | EVPEVKKEET | LLDLDFDPFK |
| 370 | 380 | 390 | 400 | 410 | 420 |
| PEVTPAGSAG | VTHSPMSQTL | PWDLWTTSTD | LVQPASGGSF | NGFTQPQDTS | LFTMQTDQSM |
| 430 | 440 | 450 | 460 | 470 | 480 |
| ICNLAESEQA | PPTEPKAEEP | LAAVTPAVGL | DLGMDTRAEE | PVEEAVIIPG | ADADAAVGTL |
| 490 | 500 | 510 | 520 | 530 | 540 |
| VSAAEGAPGE | EAEAEKATVP | AGEGVSLEEA | KIGTETTEGA | ESAQPEAEEL | EATVPQEKVI |
| 550 | 560 | 570 | 580 | 590 | 600 |
| PSVVIEPASN | HEEEGENEIT | IGAEPKETTE | DAAPPGPTSE | TPELATEQKP | IQDPQPTPSA |
| 610 | 620 | 630 | 640 | 650 | 660 |
| PAMGAADQLA | SAREASQELP | PGFLYKVETL | HDFEAANSDE | LTLQRGDVVL | VVPSDSEADQ |
| 670 | 680 | 690 | |||
| DAGWLVGVKE | SDWLQYRDLA | TYKGLFPENF | TRRLD |