P40016
Gene name |
RPN3 (SUN2, YER021W) |
Protein name |
26S proteasome regulatory subunit RPN3 |
Names |
|
Species |
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) |
KEGG Pathway |
sce:YER021W |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
28 structures for P40016
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 3J47 | EM | - | S | 455-478 | PDB |
| 3JCK | EM | 350 A | A | 131-523 | PDB |
| 3JCO | EM | 480 A | S | 1-523 | PDB |
| 3JCP | EM | 460 A | S | 1-523 | PDB |
| 4CR2 | EM | 770 A | S | 1-523 | PDB |
| 4CR3 | EM | 930 A | S | 1-523 | PDB |
| 4CR4 | EM | 880 A | S | 1-523 | PDB |
| 5A5B | EM | 950 A | S | 1-523 | PDB |
| 5MPB | EM | 780 A | S | 1-523 | PDB |
| 5MPC | EM | 770 A | S | 1-523 | PDB |
| 5MPD | EM | 410 A | S | 1-523 | PDB |
| 5MPE | EM | 450 A | S | 1-523 | PDB |
| 5WVI | EM | 630 A | S | 1-523 | PDB |
| 5WVK | EM | 420 A | S | 1-523 | PDB |
| 6FVT | EM | 410 A | S | 18-492 | PDB |
| 6FVU | EM | 450 A | S | 18-492 | PDB |
| 6FVV | EM | 540 A | S | 18-492 | PDB |
| 6FVW | EM | 450 A | S | 18-492 | PDB |
| 6FVX | EM | 490 A | S | 18-492 | PDB |
| 6FVY | EM | 610 A | S | 18-492 | PDB |
| 6J2C | EM | 700 A | S | 1-523 | PDB |
| 6J2N | EM | 750 A | S | 1-523 | PDB |
| 6J2Q | EM | 380 A | S | 1-523 | PDB |
| 6J2X | EM | 380 A | S | 1-523 | PDB |
| 6J30 | EM | 450 A | S | 1-523 | PDB |
| 7QO3 | EM | 610 A | S | 1-523 | PDB |
| 7QO5 | EM | 600 A | S | 1-523 | PDB |
| AF-P40016-F1 | Predicted | AlphaFoldDB |
7 variants for P40016
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| s05-197023 | 26 | A>V | No | SGRP | |
| s05-197101 | 52 | Y>F | No | SGRP | |
| s05-197360 | 138 | M>I | No | SGRP | |
| s05-198076 | 377 | Y>C | No | SGRP | |
| s05-198081 | 379 | L>F | No | SGRP | |
| s05-198250 | 435 | K>M | No | SGRP | |
| s05-198430 | 495 | N>T | No | SGRP |
No associated diseases with P40016
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| proteasome complex | A large multisubunit complex which catalyzes protein degradation, found in eukaryotes, archaea and some bacteria. In eukaryotes, this complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core. |
| proteasome regulatory particle, lid subcomplex | The subcomplex of the proteasome regulatory particle that forms the peripheral lid, which is added on top of the base subcomplex. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| enzyme regulator activity | Binds to and modulates the activity of an enzyme. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| proteasome-mediated ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome. |
| regulation of protein catabolic process | Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds. |
| ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein. |
3 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q2KJ46 | PSMD3 | 26S proteasome non-ATPase regulatory subunit 3 | Bos taurus (Bovine) | PR |
| O43242 | PSMD3 | 26S proteasome non-ATPase regulatory subunit 3 | Homo sapiens (Human) | PR |
| P14685 | Psmd3 | 26S proteasome non-ATPase regulatory subunit 3 | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MASTAVMMDV | DSSGVNDLHH | SEKKYAEEDQ | VQELLKVLNE | ISKTTLTLDP | RYIWRSLKDL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SSLRNQELLN | AETLCFTVNV | LYPDSSSFKK | NLLKFITSNH | KSSVPGSAEL | RNSYPASFYS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VNTEKKTIEV | TAEINCFMHL | LVQLFLWDSK | ELEQLVEFNR | KVVIPNLLCY | YNLRSLNLIN |
| 190 | 200 | 210 | 220 | 230 | 240 |
| AKLWFYIYLS | HETLARSSEE | INSDNQNIIL | RSTMMKFLKI | ASLKHDNETK | AMLINLILRD |
| 250 | 260 | 270 | 280 | 290 | 300 |
| FLNNGEVDSA | SDFISKLEYP | HTDVSSSLEA | RYFFYLSKIN | AIQLDYSTAN | EYIIAAIRKA |
| 310 | 320 | 330 | 340 | 350 | 360 |
| PHNSKSLGFL | QQSNKLHCCI | QLLMGDIPEL | SFFHQSNMQK | SLLPYYHLTK | AVKLGDLKKF |
| 370 | 380 | 390 | 400 | 410 | 420 |
| TSTITKYKQL | LLKDDTYQLC | VRLRSNVIKT | GIRIISLTYK | KISLRDICLK | LNLDSEQTVE |
| 430 | 440 | 450 | 460 | 470 | 480 |
| YMVSRAIRDG | VIEAKINHED | GFIETTELLN | IYDSEDPQQV | FDERIKFANQ | LHDEYLVSMR |
| 490 | 500 | 510 | 520 | ||
| YPEDKKTQQN | EKSENGENDD | DTLDGDLMDD | MSDISDLDDL | GFL |