Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

28 structures for P40016

Entry ID Method Resolution Chain Position Source
3J47 EM - S 455-478 PDB
3JCK EM 350 A A 131-523 PDB
3JCO EM 480 A S 1-523 PDB
3JCP EM 460 A S 1-523 PDB
4CR2 EM 770 A S 1-523 PDB
4CR3 EM 930 A S 1-523 PDB
4CR4 EM 880 A S 1-523 PDB
5A5B EM 950 A S 1-523 PDB
5MPB EM 780 A S 1-523 PDB
5MPC EM 770 A S 1-523 PDB
5MPD EM 410 A S 1-523 PDB
5MPE EM 450 A S 1-523 PDB
5WVI EM 630 A S 1-523 PDB
5WVK EM 420 A S 1-523 PDB
6FVT EM 410 A S 18-492 PDB
6FVU EM 450 A S 18-492 PDB
6FVV EM 540 A S 18-492 PDB
6FVW EM 450 A S 18-492 PDB
6FVX EM 490 A S 18-492 PDB
6FVY EM 610 A S 18-492 PDB
6J2C EM 700 A S 1-523 PDB
6J2N EM 750 A S 1-523 PDB
6J2Q EM 380 A S 1-523 PDB
6J2X EM 380 A S 1-523 PDB
6J30 EM 450 A S 1-523 PDB
7QO3 EM 610 A S 1-523 PDB
7QO5 EM 600 A S 1-523 PDB
AF-P40016-F1 Predicted AlphaFoldDB

7 variants for P40016

Variant ID(s) Position Change Description Diseaes Association Provenance
s05-197023 26 A>V No SGRP
s05-197101 52 Y>F No SGRP
s05-197360 138 M>I No SGRP
s05-198076 377 Y>C No SGRP
s05-198081 379 L>F No SGRP
s05-198250 435 K>M No SGRP
s05-198430 495 N>T No SGRP

No associated diseases with P40016

2 regional properties for P40016

Type Name Position InterPro Accession
domain Proteasome component (PCI) domain 270 - 468 IPR000717
domain 26S proteasome regulatory subunit, C-terminal 450 - 519 IPR013586

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
proteasome complex A large multisubunit complex which catalyzes protein degradation, found in eukaryotes, archaea and some bacteria. In eukaryotes, this complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core.
proteasome regulatory particle, lid subcomplex The subcomplex of the proteasome regulatory particle that forms the peripheral lid, which is added on top of the base subcomplex.

1 GO annotations of molecular function

Name Definition
enzyme regulator activity Binds to and modulates the activity of an enzyme.

3 GO annotations of biological process

Name Definition
proteasome-mediated ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
regulation of protein catabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.

3 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q2KJ46 PSMD3 26S proteasome non-ATPase regulatory subunit 3 Bos taurus (Bovine) PR
O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 Homo sapiens (Human) PR
P14685 Psmd3 26S proteasome non-ATPase regulatory subunit 3 Mus musculus (Mouse) PR
10 20 30 40 50 60
MASTAVMMDV DSSGVNDLHH SEKKYAEEDQ VQELLKVLNE ISKTTLTLDP RYIWRSLKDL
70 80 90 100 110 120
SSLRNQELLN AETLCFTVNV LYPDSSSFKK NLLKFITSNH KSSVPGSAEL RNSYPASFYS
130 140 150 160 170 180
VNTEKKTIEV TAEINCFMHL LVQLFLWDSK ELEQLVEFNR KVVIPNLLCY YNLRSLNLIN
190 200 210 220 230 240
AKLWFYIYLS HETLARSSEE INSDNQNIIL RSTMMKFLKI ASLKHDNETK AMLINLILRD
250 260 270 280 290 300
FLNNGEVDSA SDFISKLEYP HTDVSSSLEA RYFFYLSKIN AIQLDYSTAN EYIIAAIRKA
310 320 330 340 350 360
PHNSKSLGFL QQSNKLHCCI QLLMGDIPEL SFFHQSNMQK SLLPYYHLTK AVKLGDLKKF
370 380 390 400 410 420
TSTITKYKQL LLKDDTYQLC VRLRSNVIKT GIRIISLTYK KISLRDICLK LNLDSEQTVE
430 440 450 460 470 480
YMVSRAIRDG VIEAKINHED GFIETTELLN IYDSEDPQQV FDERIKFANQ LHDEYLVSMR
490 500 510 520
YPEDKKTQQN EKSENGENDD DTLDGDLMDD MSDISDLDDL GFL