P38666
Gene name |
RPL24B |
Protein name |
60S ribosomal protein L24-2 |
Names |
Protein SHORT VALVE 1 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT3G53020 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for P38666
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-P38666-F1 | Predicted | AlphaFoldDB |
2 variants for P38666
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_3_19661107_G_A | 76 | A>V | No | 1000Genomes | |
| ENSVATH12736285 | 98 | A>S | No | 1000Genomes |
No associated diseases with P38666
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| cytosolic large ribosomal subunit | The large subunit of a ribosome located in the cytosol. |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
| structural constituent of ribosome | The action of a molecule that contributes to the structural integrity of the ribosome. |
5 GO annotations of biological process
| Name | Definition |
|---|---|
| adaxial/abaxial pattern specification | The regionalization process in which differences in cell differentiation along the adaxial/abaxial are generated. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure. |
| auxin-activated signaling pathway | The series of molecular signals generated by the binding of the plant hormone auxin to a receptor, and ending with modulation of a downstream cellular process, e.g. transcription. |
| cytoplasmic translation | The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein. |
| gynoecium development | The process whose specific outcome is the progression of the gynoecium over time, from its formation to the mature structure. The gynoecium is the collective name for the carpels of a flower. |
| leaf morphogenesis | The process in which the anatomical structures of the leaf are generated and organized. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MVLKTELCRF | SGQKIYPGRG | IRFIRSDSQV | FLFLNSKCKR | YFHNKLKPSK | LAWTAMYRKQ |
| 70 | 80 | 90 | 100 | 110 | 120 |
| HKKDAAQEAV | KRRRRATKKP | YSRSIVGATL | EVIQKKRAEK | PEVRDAAREA | ALREIKERIK |
| 130 | 140 | 150 | 160 | ||
| KTKDEKKAKK | VEFASKQQKV | KANFPKAAAA | SKGPKVGGGG | GKR |