P19012
Gene name |
KRT15 (KRTB) |
Protein name |
Keratin, type I cytoskeletal 15 |
Names |
Cytokeratin-15, CK-15, Keratin-15, K15 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:3866 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for P19012
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-P19012-F1 | Predicted | AlphaFoldDB |
423 variants for P19012
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA399475741 rs1483219262 |
2 | T>S | No |
ClinGen gnomAD |
|
|
rs1211653157 CA399475735 |
3 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs757405421 CA8561416 |
3 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA290652472 rs370565109 |
4 | T>K | No |
ClinGen ESP |
|
|
CA8561415 rs752544766 |
7 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399475701 rs752544766 |
7 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 11 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 13 | F>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399475597 rs77281280 |
15 | G>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs376192010 CA8561410 |
15 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8561411 rs77281280 |
15 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA399475587 rs1452716504 |
16 | G>A | No |
ClinGen TOPMed |
|
|
CA8561409 rs369898294 |
17 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8561408 rs771455618 |
18 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs774667062 CA8561406 COSM1610237 |
19 | R>* | liver [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA399475559 rs1466393767 |
19 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1001482736 CA290652440 |
21 | G>S | No |
ClinGen TOPMed |
|
|
rs1012545231 CA290652439 |
21 | G>V | No |
ClinGen gnomAD |
|
|
CA399475528 rs1423698306 |
22 | S>F | No |
ClinGen gnomAD |
|
|
CA8561403 rs749595011 |
23 | L>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 25 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8561397 CA8561396 rs778649261 |
26 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA8561398 rs778649261 |
26 | G>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs754941022 CA8561395 |
27 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA399475479 rs1243822844 |
28 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA290652390 rs1023725953 |
29 | G>V | No |
ClinGen TOPMed |
|
|
rs1372388443 CA399475457 |
30 | F>L | No |
ClinGen gnomAD |
|
|
rs1314733690 CA399475451 |
31 | G>D | No |
ClinGen gnomAD |
|
|
RCV000965380 rs73294423 CA8561391 |
32 | G>E | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs147124537 CA8561393 CA399475447 |
32 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs147124537 CA8561392 |
32 | G>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs767225716 CA8561390 |
33 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1597776972 CA399475434 |
34 | S>G | No |
ClinGen Ensembl |
|
|
CA399475431 rs1329875866 |
34 | S>N | No |
ClinGen gnomAD |
|
|
CA399475417 rs1467279693 |
35 | L>P | No |
ClinGen TOPMed |
|
|
rs776189330 CA8561384 |
37 | G>A | No |
ClinGen ExAC |
|
|
CA8561385 rs763543001 |
37 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA399475389 rs746266604 |
38 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8561381 rs746266604 |
38 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399475378 rs1167526205 |
40 | G>R | No |
ClinGen gnomAD |
|
|
CA8561380 rs374450364 |
41 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201420219 CA8561379 |
42 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8561378 rs777893382 |
42 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1176786 CA8561377 rs777893382 |
42 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs758520635 CA8561376 |
45 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA399475324 rs1161040378 |
46 | A>V | No |
ClinGen TOPMed |
|
|
CA290652255 rs939602644 |
48 | S>P | No |
ClinGen Ensembl |
|
|
rs1391872089 CA399475304 |
49 | A>T | No |
ClinGen TOPMed |
|
|
CA290652254 rs773622745 |
50 | R>G | No |
ClinGen TOPMed |
|
|
rs141240187 CA8561372 |
50 | R>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8561371 rs755851094 |
52 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs750235624 CA8561370 |
53 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA8561369 rs767015435 |
55 | G>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 55 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 57 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs751231336 CA8561367 |
58 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs762594315 CA8561366 |
59 | G>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399475213 rs1327497689 |
59 | G>E | No |
ClinGen TOPMed |
|
|
CA8561365 rs762594315 |
59 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8561364 rs776100850 |
62 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA8561363 rs765867902 |
63 | G>D | No |
ClinGen ExAC gnomAD |
|
|
TCGA novel CA399475154 rs1159835729 |
64 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen gnomAD |
|
rs1454522745 CA399475159 |
64 | M>L | No |
ClinGen gnomAD |
|
|
rs1597776786 CA399475151 |
65 | R>G | No |
ClinGen Ensembl |
|
|
CA8561361 rs370906587 |
65 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1392791089 CA399475139 |
66 | V>A | No |
ClinGen gnomAD |
|
|
rs377160493 CA8561359 |
70 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA399475113 rs1597776766 |
70 | G>S | No |
ClinGen Ensembl |
|
|
rs932661048 CA290652186 |
71 | G>R | No |
ClinGen Ensembl |
|
|
CA8561358 rs202086237 |
72 | G>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs748245980 CA8561357 |
73 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs748245980 CA8561356 |
73 | A>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 74 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1286626782 CA399475095 |
74 | G>S | No |
ClinGen gnomAD |
|
|
rs1597776731 CA399475088 |
75 | S>G | No |
ClinGen Ensembl |
|
|
CA8561352 rs141025962 |
75 | S>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8561353 rs745863708 |
75 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1303810856 CA399475052 |
78 | G>D | No |
ClinGen gnomAD |
|
|
CA8561350 rs555279126 |
78 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
| TCGA novel | 80 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1483317138 CA399475038 |
80 | G>D | No |
ClinGen TOPMed |
|
|
CA8561347 rs757934023 |
83 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA399475007 rs757934023 |
83 | G>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs760106747 CA8561345 |
84 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760106747 CA8561344 |
84 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8561346 rs115538401 |
84 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA399474988 rs146785055 |
85 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8561341 rs146785055 |
85 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 85 | V>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8561340 rs773431824 |
86 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 87 | G>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs143546926 CA8561339 |
88 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1195739001 CA399474919 |
92 | G>S | No |
ClinGen gnomAD |
|
|
rs1410917762 CA399474883 |
95 | G>C | No |
ClinGen TOPMed |
|
|
rs774413086 CA8561337 |
96 | G>D | No |
ClinGen ExAC |
|
|
rs139430495 CA8561335 |
97 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs772272150 CA290652112 |
98 | G>R | No |
ClinGen TOPMed |
|
|
rs146745077 CA8561333 |
99 | G>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1323679621 CA399474847 |
99 | G>S | No |
ClinGen TOPMed |
|
|
rs770720550 CA399474838 |
100 | L>F | No |
ClinGen ExAC TOPMed |
|
|
rs770720550 CA8561332 |
100 | L>I | No |
ClinGen ExAC TOPMed |
|
|
rs878921155 CA290652103 |
102 | S>T | No |
ClinGen Ensembl |
|
| TCGA novel | 108 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs149727641 CA399474770 CA290652096 |
109 | M>L | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1217102605 CA399474766 |
109 | M>T | No |
ClinGen gnomAD |
|
| TCGA novel | 110 | Q>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777510451 CA8561330 |
110 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA8561329 rs139556869 |
113 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs201164162 CA8561328 |
115 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs199506230 CA8561327 |
115 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs199506230 CA399474723 |
115 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1214367356 CA399474722 |
116 | L>M | No |
ClinGen Ensembl |
|
|
rs754327633 CA8561325 |
117 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs761038537 CA8561323 |
119 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs1035351573 CA290652013 |
119 | Y>C | No |
ClinGen Ensembl |
|
|
CA290651992 rs748169354 |
121 | D>H | No |
ClinGen gnomAD |
|
| TCGA novel | 121 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767940611 CA8561321 |
122 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA290651988 rs200209333 |
124 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA8561319 rs774608568 |
124 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs774608568 CA8561320 |
124 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA290651980 rs767131619 |
128 | E>K | No |
ClinGen Ensembl |
|
|
CA399474638 rs1196918516 |
130 | N>H | No |
ClinGen gnomAD |
|
|
rs776584139 CA8561316 |
130 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1259060616 CA399474614 |
134 | E>K | No |
ClinGen gnomAD |
|
|
rs1328890627 CA399474609 |
134 | E>V | No |
ClinGen Ensembl |
|
|
CA8561314 rs746751590 |
135 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8561313 rs773127784 |
137 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs1284096520 CA399474589 |
137 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1230675052 CA399474583 |
138 | H>R | No |
ClinGen TOPMed |
|
|
CA8561312 rs374347007 |
139 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs747770416 CA8561311 CA399474555 |
141 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1445498753 CA399474557 |
141 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1445498753 CA399474556 |
141 | Y>F | No |
ClinGen TOPMed gnomAD |
|
|
CA399474542 rs1333063839 |
143 | K>* | No |
ClinGen gnomAD |
|
|
CA8561310 rs202231383 |
144 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs748757866 CA8561308 |
145 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs754460236 CA8561309 |
145 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA399474519 rs1176886502 |
146 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1176886502 CA399474521 |
146 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA8561306 rs1050784 VAR_047429 |
147 | T>A | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1050784 CA399474512 |
147 | T>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA399474511 rs1050784 |
147 | T>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8561303 rs757661638 |
151 | C>F | No |
ClinGen ExAC gnomAD |
|
|
rs1200805840 CA399474475 |
151 | C>S | No |
ClinGen gnomAD |
|
|
rs764246868 CA8561301 |
152 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs775437728 CA8561300 |
153 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1191153465 CA399474439 |
153 | Y>H | No |
ClinGen TOPMed |
|
|
CA8561299 rs775437728 |
153 | Y>S | No |
ClinGen ExAC gnomAD |
|
|
CA399474409 rs1238820557 |
154 | S>R | No |
ClinGen gnomAD |
|
|
CA8561297 rs373600329 |
155 | Q>* | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1310993575 CA399474397 |
155 | Q>P | No |
ClinGen gnomAD |
|
|
rs773320588 CA8561296 |
158 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs139517360 CA8561295 |
158 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA399474339 rs1177259183 |
159 | T>I | No |
ClinGen TOPMed |
|
|
rs1358569986 CA399474329 |
160 | I>M | No |
ClinGen gnomAD |
|
|
COSM3795602 rs200448494 CA8561293 |
160 | I>T | urinary_tract [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA8561294 rs147353121 |
160 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1389596165 CA399474310 |
163 | L>V | No |
ClinGen TOPMed |
|
|
CA8561290 COSM124022 rs139367098 |
164 | R>Q | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs142682445 CA8561291 |
164 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs761826223 CA8561259 |
167 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA399473741 rs1481491028 |
168 | M>K | No |
ClinGen gnomAD |
|
|
CA399473747 rs1481491028 |
168 | M>T | No |
ClinGen gnomAD |
|
|
rs1220652675 CA399473723 |
169 | A>T | No |
ClinGen gnomAD |
|
|
CA399473666 rs1597775007 |
172 | I>S | No |
ClinGen Ensembl |
|
|
CA290651022 rs897610668 |
173 | D>E | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 173 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1248233005 CA399473659 |
173 | D>N | No |
ClinGen gnomAD |
|
|
rs763769801 CA8561256 |
174 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA8561254 rs769451472 |
176 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs200359694 CA8561252 |
176 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200359694 CA8561251 |
176 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs769451472 CA8561253 |
176 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA399473540 rs1375013813 |
180 | E>D | No |
ClinGen TOPMed |
|
|
rs778375545 CA8561248 |
180 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA399473523 rs1046921378 |
181 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
rs374763275 CA8561247 |
182 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1158863175 CA399473510 |
182 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
rs374763275 CA399473518 |
182 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1420505651 CA399473491 |
183 | N>S | No |
ClinGen gnomAD |
|
|
rs78272919 CA8561246 |
184 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA399473475 rs78272919 |
184 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs374734265 CA8561245 |
185 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA399473437 rs1597774928 |
186 | L>Q | No |
ClinGen Ensembl |
|
|
CA8561243 rs754167048 |
188 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs147023381 CA8561238 |
190 | D>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8561237 rs147023381 |
190 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8561239 rs147023381 |
190 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs199909892 CA290650924 |
191 | F>V | No |
ClinGen 1000Genomes |
|
|
rs549866723 CA8561235 |
194 | K>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8561208 rs775035200 |
195 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA8561206 rs749696496 |
196 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs775800199 CA399473174 |
197 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8561205 rs775800199 |
197 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA290650780 rs199922004 |
200 | A>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
COSM3672445 CA8561203 rs201818657 |
202 | R>C | prostate [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA8561202 rs200854917 |
202 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8561201 rs781318262 |
203 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA8561199 COSM215684 rs138271368 |
205 | V>I | kidney liver oesophagus large_intestine endometrium central_nervous_system prostate breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs778844537 CA290650759 |
206 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA8561198 rs778844537 |
206 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA290650753 rs897490395 |
210 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA290650742 rs753633915 |
211 | G>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs753633915 CA8561196 |
211 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779887782 CA8561195 |
212 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA8561194 rs755775681 |
213 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs373548890 CA290650741 |
213 | R>H | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs373548890 CA399472953 |
213 | R>P | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs767019289 CA8561192 |
214 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767019289 CA399472948 |
214 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399472945 COSM3795601 rs1445365258 |
214 | R>Q | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1002172447 CA290650726 |
215 | V>I | No |
ClinGen Ensembl |
|
|
rs761263791 CA8561191 |
216 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs764716000 CA8561189 |
217 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs763346260 CA399472870 |
219 | L>M | No |
ClinGen ExAC gnomAD |
|
|
rs763346260 CA8561188 |
219 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1198002851 CA399472855 |
220 | T>S | No |
ClinGen gnomAD |
|
|
rs775994227 CA8561187 |
223 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399472797 rs150440688 |
223 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA290650678 rs375580914 |
226 | L>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8561183 rs375580914 |
226 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1384417680 CA399472772 |
227 | E>K | No |
ClinGen gnomAD |
|
|
CA8561182 rs776759431 |
229 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA8561181 rs770992337 |
230 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs1193860183 CA399472709 |
231 | E>K | No |
ClinGen TOPMed |
|
|
CA399472676 rs1330646503 |
232 | G>A | No |
ClinGen gnomAD |
|
|
CA399472689 rs1336068521 |
232 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA290650664 rs977412081 |
235 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA8561180 rs747103036 |
236 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs778754977 CA8561179 |
239 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs199856935 CA290650649 |
240 | L>P | No |
ClinGen 1000Genomes |
|
|
rs768574891 CA8561178 |
241 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 242 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| rs1387332378 | 242 | K>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1470786935 CA399472526 |
243 | N>D | No |
ClinGen TOPMed |
|
|
rs779872396 CA8561176 |
243 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs749277399 CA8561177 |
243 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs140616866 CA8561174 COSM979217 |
245 | E>K | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs868151216 CA290650137 |
247 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA399472344 rs1338360662 |
248 | M>I | No |
ClinGen gnomAD |
|
|
rs753216610 CA8561149 |
248 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA8561148 rs765675080 |
251 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA399472254 rs1430068973 |
253 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA8561147 COSM706373 rs755301058 |
256 | A>V | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1177643181 CA399472205 |
257 | G>D | No |
ClinGen gnomAD |
|
|
rs768028727 CA8561145 |
257 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 258 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399472170 rs1223632137 |
260 | N>S | No |
ClinGen TOPMed |
|
|
rs1186512233 CA399472155 |
261 | V>G | No |
ClinGen gnomAD |
|
|
CA8561142 rs773458908 |
261 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA399472143 rs1271325033 |
262 | E>D | No |
ClinGen TOPMed |
|
|
CA8561140 rs761900612 |
263 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775443554 CA8561139 |
264 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA8561137 rs776280590 |
265 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8561136 rs776280590 |
265 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770898843 CA8561135 |
265 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs746630502 CA8561134 |
267 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1362686475 CA399472070 |
269 | V>G | No |
ClinGen gnomAD |
|
|
CA8561131 rs747614837 |
269 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs754413573 CA8561128 |
273 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA8561127 rs146803862 |
273 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs572935515 CA8561126 |
274 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs750592404 CA8561125 |
275 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs891347135 CA399471992 |
276 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA290650004 rs891347135 |
276 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA290649995 rs946342723 |
280 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs764295675 COSM979215 CA399471900 |
283 | E>K | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs764295675 CA8561121 |
283 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8561119 rs776670190 |
284 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs759369731 CA8561120 |
284 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA290649943 rs368224373 |
285 | M>V | No |
ClinGen ESP |
|
|
rs770811080 CA8561118 |
286 | A>S | No |
ClinGen ExAC |
|
|
CA8561117 rs145001788 |
286 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 286 | A>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1481678602 CA399471853 |
287 | E>* | No |
ClinGen TOPMed |
|
|
rs771844890 CA8561115 |
288 | K>* | No |
ClinGen ExAC |
|
|
rs778264547 CA8561113 |
289 | N>K | No |
ClinGen ExAC TOPMed |
|
|
rs1181763392 CA399471822 |
289 | N>S | No |
ClinGen TOPMed |
|
|
CA399471824 rs1181763392 |
289 | N>T | No |
ClinGen TOPMed |
|
|
rs151228901 CA8561112 |
290 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs202191389 CA8561111 |
290 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs202191389 CA399471809 |
290 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA399471814 rs151228901 |
290 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs750794463 CA8561108 |
291 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8561109 rs200235542 |
291 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8561106 rs757412717 |
292 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8561107 rs781606724 |
292 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA399471796 rs1449841577 |
292 | D>Y | No |
ClinGen TOPMed |
|
|
CA399471786 rs1443499596 |
293 | V>I | No |
ClinGen gnomAD |
|
| TCGA novel | 294 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8561103 rs149096052 |
294 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs149096052 CA8561102 |
294 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA399471758 rs1286444130 |
295 | A>D | No |
ClinGen TOPMed |
|
|
rs1597773676 CA399471741 |
297 | F>V | No |
ClinGen Ensembl |
|
|
CA399471725 rs1337877118 |
298 | F>V | No |
ClinGen TOPMed |
|
|
CA8561073 rs774970453 |
301 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs769345550 CA8561072 |
303 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs746347224 CA8561071 |
303 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs1397556671 CA399471593 |
305 | N>I | No |
ClinGen gnomAD |
|
|
CA399471586 rs1280791852 |
306 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA399471570 rs1289025032 |
307 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA8561070 rs189721133 |
307 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1357169602 CA399471461 |
314 | M>R | No |
ClinGen gnomAD |
|
|
CA399471414 rs1175470073 |
317 | T>N | No |
ClinGen gnomAD |
|
|
CA8561068 rs747416124 |
318 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs1282072796 CA399471399 |
319 | K>E | No |
ClinGen TOPMed |
|
|
CA8561067 rs373081379 |
320 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA399471374 rs1567718278 |
322 | I>S | No |
ClinGen Ensembl |
|
|
rs369652117 CA8561066 |
323 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200152929 CA8561064 |
325 | L>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs149918613 CA8561062 |
327 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs540200615 CA8561061 |
327 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs151089400 CA8561060 |
328 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8561058 rs763856197 |
329 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1383596251 CA399471335 |
329 | M>T | No |
ClinGen TOPMed |
|
|
rs762576421 CA8561057 |
330 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA399471327 rs1383503098 |
330 | Q>R | No |
ClinGen gnomAD |
|
|
rs775166862 CA8561056 |
331 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs974853892 CA290649604 COSM1679803 |
335 | E>K | large_intestine skin [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA8561055 rs564196717 |
337 | Q>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8561054 rs759069758 COSM226800 |
341 | S>N | skin [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA8561053 rs776947737 |
341 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA290649318 rs56929273 |
344 | A>D | No |
ClinGen gnomAD |
|
|
CA8561026 rs749533246 |
344 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399471220 rs56929273 |
344 | A>V | No |
ClinGen gnomAD |
|
|
rs1363744132 CA399471217 |
345 | G>W | No |
ClinGen gnomAD |
|
|
CA8561024 rs769807432 |
351 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399471178 rs769807432 |
351 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs79344504 CA8561021 |
352 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8561022 rs79344504 COSM1679802 |
352 | E>Q | breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1567718102 CA399471158 |
354 | E>D | No |
ClinGen Ensembl |
|
|
rs752494682 CA8561020 |
356 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs778748722 CA8561019 |
356 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA626215056 rs1184518329 |
357 | Y>* | No |
ClinGen gnomAD |
|
|
CA8561018 rs754601306 |
357 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs921724315 CA290649291 |
358 | A>T | No |
ClinGen TOPMed |
|
|
rs572889590 CA8561017 |
359 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8561016 rs765872850 |
359 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs768139350 CA8561013 |
362 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762474276 CA8561012 |
363 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA8561011 rs774841034 |
364 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1235585568 CA399471050 |
365 | Q>R | No |
ClinGen gnomAD |
|
|
rs562624944 COSM1383193 CA8561008 |
368 | I>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA8561007 rs200508995 |
371 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 373 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1400343644 CA399470870 |
378 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8561005 rs371742393 COSM1212792 |
379 | R>* | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs771994753 CA8561004 COSM979214 |
379 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA399470845 rs140276645 |
380 | C>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8561002 rs539545400 |
380 | C>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs539545400 CA8561003 |
380 | C>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8561000 rs753481169 |
381 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA399470821 rs1478719795 |
382 | M>R | No |
ClinGen gnomAD |
|
|
CA290649159 rs929806601 |
382 | M>V | No |
ClinGen Ensembl |
|
|
CA399470793 rs1220132803 |
384 | A>T | No |
ClinGen TOPMed |
|
|
rs779586320 CA8560999 |
385 | Q>* | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 385 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1567718027 CA399470747 |
387 | Q>R | No |
ClinGen Ensembl |
|
|
CA399470719 rs749895999 |
389 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs749895999 CA8560997 |
389 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
CA8560995 rs762390404 |
391 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1387706512 CA399470688 |
391 | M>K | No |
ClinGen gnomAD |
|
|
rs1318649409 CA399470671 |
392 | L>P | No |
ClinGen gnomAD |
|
|
CA8560994 rs752153718 |
392 | L>V | No |
ClinGen ExAC |
|
| TCGA novel | 393 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8560993 rs764514020 |
394 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs142005107 CA8560990 |
395 | I>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs150705394 CA8560992 |
395 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA399470636 rs142005107 |
395 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs150705394 CA8560991 |
395 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA399470617 rs1257110780 |
396 | K>N | No |
ClinGen TOPMed |
|
|
rs144789524 CA8560988 |
398 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8560989 rs148156722 |
398 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1327225813 CA399470577 |
400 | E>* | No |
ClinGen gnomAD |
|
|
CA399470572 rs1597772986 |
400 | E>G | No |
ClinGen Ensembl |
|
|
rs1471720981 CA399470560 |
401 | Q>* | No |
ClinGen gnomAD |
|
|
CA8560986 rs748035439 |
401 | Q>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 402 | E>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs758071880 CA8560983 |
404 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1480155044 CA399470487 |
406 | Y>* | No |
ClinGen TOPMed |
|
|
rs138894344 CA8560980 |
407 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8560979 rs780820668 |
407 | R>H | Variant assessed as Somatic; 4.699e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA290649063 rs747551591 |
409 | L>P | No |
ClinGen gnomAD |
|
|
rs1451631884 CA399470447 |
410 | L>F | No |
ClinGen TOPMed |
|
|
CA399470427 rs758727161 |
411 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8560974 rs753002634 |
411 | E>D | No |
ClinGen ExAC |
|
|
rs758727161 CA8560975 |
411 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA290649026 rs758727161 |
411 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399470340 rs1401574080 |
414 | D>N | No |
ClinGen TOPMed |
|
|
CA8560973 rs779996022 |
415 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1205439736 CA399470315 |
415 | A>T | No |
ClinGen gnomAD |
|
|
CA8560972 rs2305556 VAR_047430 |
416 | K>R | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1423507138 CA399490623 |
417 | M>T | No |
ClinGen gnomAD |
|
|
rs138611195 CA8560949 |
420 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs897420 CA8560948 |
421 | A>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8560947 VAR_047431 rs897420 |
421 | A>G | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs897420 CA399490554 |
421 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs769428138 CA8560946 |
424 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1360814838 CA399490221 |
428 | G>V | No |
ClinGen gnomAD |
|
|
CA399490208 rs1289151818 |
429 | G>V | No |
ClinGen gnomAD |
|
|
CA399490199 rs1341531923 |
430 | G>D | No |
ClinGen TOPMed |
|
|
rs1450710719 CA399490166 |
432 | S>N | No |
ClinGen gnomAD |
|
|
CA399490154 rs771422905 |
433 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771422905 CA8560921 |
433 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8560920 rs747695154 |
433 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA399490075 rs1273224615 |
437 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA399490052 rs1470279611 |
439 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
CA399490050 rs1470279611 |
439 | N>H | No |
ClinGen TOPMed gnomAD |
|
|
CA8560918 rs776693389 |
439 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1341877496 CA399490000 |
442 | E>G | No |
ClinGen gnomAD |
|
|
rs1487798321 CA399490005 |
442 | E>K | No |
ClinGen TOPMed |
|
|
rs1261290089 CA399489977 |
444 | V>L | No |
ClinGen gnomAD |
|
|
rs1466484502 CA399489955 |
445 | D>V | No |
ClinGen gnomAD |
|
|
CA8560914 rs756501099 |
446 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs560627933 CA8560915 |
446 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1597771748 CA399489933 |
447 | Q>* | No |
ClinGen Ensembl |
|
|
rs746030822 CA8560913 |
447 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1597771737 CA399489891 |
449 | V>G | No |
ClinGen Ensembl |
|
|
rs536009613 CA290697698 |
452 | H>P | No |
ClinGen gnomAD |
|
|
rs757217904 CA8560911 |
453 | K>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 453 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM979211 rs1305736331 CA399489808 |
455 | E>* | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
No associated diseases with P19012
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoskeleton | A cellular structure that forms the internal framework of eukaryotic and prokaryotic cells. The cytoskeleton includes intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
| intermediate filament | A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| scaffold protein binding | Binding to a scaffold protein. Scaffold proteins are crucial regulators of many key signaling pathways. Although not strictly defined in function, they are known to interact and/or bind with multiple members of a signaling pathway, tethering them into complexes. |
| structural constituent of cytoskeleton | The action of a molecule that contributes to the structural integrity of a cytoskeletal structure. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| epidermis development | The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species. |
| epithelial cell differentiation | The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium. |
| intermediate filament organization | Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking. |
4 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P05783 | KRT18 | Keratin, type I cytoskeletal 18 | Homo sapiens (Human) | PR |
| Q04695 | KRT17 | Keratin, type I cytoskeletal 17 | Homo sapiens (Human) | PR |
| P02533 | KRT14 | Keratin, type I cytoskeletal 14 | Homo sapiens (Human) | PR |
| Q9QWL7 | Krt17 | Keratin, type I cytoskeletal 17 | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MTTTFLQTSS | STFGGGSTRG | GSLLAGGGGF | GGGSLSGGGG | SRSISASSAR | FVSSGSGGGY |
| 70 | 80 | 90 | 100 | 110 | 120 |
| GGGMRVCGFG | GGAGSVFGGG | FGGGVGGGFG | GGFGGGDGGL | LSGNEKITMQ | NLNDRLASYL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DKVRALEEAN | ADLEVKIHDW | YQKQTPTSPE | CDYSQYFKTI | EELRDKIMAT | TIDNSRVILE |
| 190 | 200 | 210 | 220 | 230 | 240 |
| IDNARLAADD | FRLKYENELA | LRQGVEADIN | GLRRVLDELT | LARTDLEMQI | EGLNEELAYL |
| 250 | 260 | 270 | 280 | 290 | 300 |
| KKNHEEEMKE | FSSQLAGQVN | VEMDAAPGVD | LTRVLAEMRE | QYEAMAEKNR | RDVEAWFFSK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| TEELNKEVAS | NTEMIQTSKT | EITDLRRTMQ | ELEIELQSQL | SMKAGLENSL | AETECRYATQ |
| 370 | 380 | 390 | 400 | 410 | 420 |
| LQQIQGLIGG | LEAQLSELRC | EMEAQNQEYK | MLLDIKTRLE | QEIATYRSLL | EGQDAKMAGI |
| 430 | 440 | 450 | |||
| AIREASSGGG | GSSSNFHINV | EESVDGQVVS | SHKREI |