Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

5 structures for P0AE88

Entry ID Method Resolution Chain Position Source
4UHJ X-ray 190 A A/B/C 1-123 PDB
4UHK X-ray 260 A A/B/C 1-123 PDB
4UHS X-ray 500 A A/B/C 1-123 PDB
4UHT X-ray 115 A A/B 131-231 PDB
AF-P0AE88-F1 Predicted AlphaFoldDB

No variants for P0AE88

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for P0AE88

No associated diseases with P0AE88

2 regional properties for P0AE88

Type Name Position InterPro Accession
domain Signal transduction response regulator, receiver domain 2 - 115 IPR001789
domain OmpR/PhoB-type DNA-binding domain 131 - 230 IPR001867

Functions

Description
EC Number
Subcellular Localization
  • Cytoplasm
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
cytosol The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
protein-DNA complex A macromolecular complex containing both protein and DNA molecules.

4 GO annotations of molecular function

Name Definition
DNA-binding transcription activator activity A DNA-binding transcription factor activity that activates or increases transcription of specific gene sets.
DNA-binding transcription factor activity A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
phosphorelay response regulator activity Responds to a phosphorelay sensor to initiate a change in cell state or activity. The activity of the response regulator is regulated by transfer of a phosphate from a histidine residue in the sensor, to an aspartate residue in the response regulator. Many but not all response regulators act as transcriptional regulators to elicit a response.
transcription cis-regulatory region binding Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.

4 GO annotations of biological process

Name Definition
cell adhesion The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
negative regulation of DNA-templated transcription Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
positive regulation of DNA-templated transcription Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
regulation of cell-substrate adhesion Any process that modulates the frequency, rate or extent of cell-substrate adhesion. Cell-substrate adhesion is the attachment of a cell to the underlying substrate via adhesion molecules.

2 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
P52108 rstA Transcriptional regulatory protein RstA Escherichia coli (strain K12) PR
P0A9Q1 arcA Aerobic respiration control protein ArcA Escherichia coli (strain K12) PR
10 20 30 40 50 60
MNKILLVDDD RELTSLLKEL LEMEGFNVIV AHDGEQALDL LDDSIDLLLL DVMMPKKNGI
70 80 90 100 110 120
DTLKALRQTH QTPVIMLTAR GSELDRVLGL ELGADDYLPK PFNDRELVAR IRAILRRSHW
130 140 150 160 170 180
SEQQQNNDNG SPTLEVDALV LNPGRQEASF DGQTLELTGT EFTLLYLLAQ HLGQVVSREH
190 200 210 220 230
LSQEVLGKRL TPFDRAIDMH ISNLRRKLPD RKDGHPWFKT LRGRGYLMVS AS