O95436
Gene name |
SLC34A2 |
Protein name |
Sodium-dependent phosphate transport protein 2B |
Names |
Sodium-phosphate transport protein 2B, Na(+)-dependent phosphate cotransporter 2B, NaPi3b, Sodium/phosphate cotransporter 2B, Na(+)/Pi cotransporter 2B, NaPi-2b, Solute carrier family 34 member 2 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:10568 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for O95436
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-O95436-F1 | Predicted | AlphaFoldDB |
651 variants for O95436
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs796065044 RCV000190366 |
71 | N>missing | PULMONARY ALVEOLAR MICROLITHIASIS [ClinVar] | Yes |
ClinVar dbSNP |
|
CA117703 rs137853141 RCV000006070 |
76 | Q>* | PULMONARY ALVEOLAR MICROLITHIASIS [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
CA117705 CA2879413 rs137853142 VAR_030677 RCV000006071 |
106 | G>R | PULMONARY ALVEOLAR MICROLITHIASIS PULAM [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV001335422 CA2879749 rs150747522 |
415 | T>S | PULMONARY ALVEOLAR MICROLITHIASIS [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000455319 rs6448389 VAR_030678 RCV001808831 RCV002056704 CA2879976 |
634 | D>G | PULMONARY ALVEOLAR MICROLITHIASIS [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA2879288 rs746078874 |
3 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1183280436 CA356564803 |
3 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1279336691 CA356564836 |
4 | W>* | No |
ClinGen gnomAD |
|
|
CA93645924 rs374959802 |
5 | P>L | No |
ClinGen TOPMed |
|
|
CA93645954 rs374362027 |
7 | L>F | No |
ClinGen TOPMed |
|
|
rs1258669601 CA356564914 |
8 | G>R | No |
ClinGen TOPMed |
|
|
CA2879298 rs774164744 |
9 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA2879300 rs541244250 |
10 | A>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs541244250 CA2879301 |
10 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA356564965 rs1577491241 |
11 | Q>K | No |
ClinGen Ensembl |
|
|
CA356564988 rs1224743125 |
12 | P>A | No |
ClinGen gnomAD |
|
|
rs1427705269 CA356565012 |
13 | N>S | No |
ClinGen gnomAD |
|
|
rs760202996 CA2879303 |
14 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1190839863 CA356565029 |
14 | P>S | No |
ClinGen gnomAD |
|
|
CA2879307 rs373409432 |
15 | D>G | No |
ClinGen ESP ExAC gnomAD |
|
|
CA2879306 rs759231403 COSM290841 |
15 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs758725458 CA2879309 |
16 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1289974350 CA356565044 |
16 | K>Q | No |
ClinGen gnomAD |
|
|
rs756307099 CA2879315 |
19 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs148983432 CA2879314 |
19 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA356565073 rs1313122273 |
20 | G>R | No |
ClinGen gnomAD |
|
|
CA356565071 rs1313122273 |
20 | G>W | No |
ClinGen gnomAD |
|
|
CA2879317 rs747909819 |
21 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA2879316 rs780162354 |
21 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs138461251 CA356565082 |
22 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2879319 rs138461251 |
22 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA356565088 rs1176412754 |
23 | G>C | No |
ClinGen gnomAD |
|
|
rs1203284366 CA356565089 |
23 | G>D | No |
ClinGen gnomAD |
|
|
rs746937122 CA2879320 |
25 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs771029639 CA2879322 |
26 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356565107 rs771029639 |
26 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879323 rs776254543 |
33 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1362685495 CA356565161 |
34 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA356565172 rs1238534614 |
35 | T>N | No |
ClinGen TOPMed |
|
|
rs1452307131 CA356565169 |
35 | T>P | No |
ClinGen gnomAD |
|
|
CA2879325 rs764907223 |
36 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA356565213 rs1346138984 |
39 | D>A | No |
ClinGen gnomAD |
|
|
CA2879347 rs762187457 |
41 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA356565239 rs1261064936 |
43 | A>T | No |
ClinGen gnomAD |
|
|
rs148305209 CA2879349 |
44 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2879348 rs147129009 |
44 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
RCV000962070 rs35426730 CA2879350 VAR_034156 |
45 | V>A | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA2879351 rs766364198 |
46 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1219154333 CA356565260 |
47 | K>E | No |
ClinGen TOPMed |
|
|
rs755130085 CA2879353 |
48 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356565275 rs1480423478 |
49 | E>* | No |
ClinGen gnomAD |
|
| TCGA novel | 49 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2879354 rs374467761 |
52 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA93646313 rs374467761 |
52 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1410827889 CA356565301 |
53 | S>F | No |
ClinGen gnomAD |
|
|
rs757126576 CA2879356 |
54 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs751356705 CA2879355 |
54 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA2879357 rs78068143 |
55 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs114109706 CA2879358 |
56 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2879359 rs769841286 |
59 | L>M | No |
ClinGen ExAC |
|
|
rs779401709 CA2879360 |
61 | D>G | No |
ClinGen ExAC |
|
|
rs753379731 CA2879361 |
62 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753379731 CA93646390 |
62 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356565362 rs1401524182 |
64 | T>A | No |
ClinGen TOPMed |
|
|
rs1313217429 CA356565367 |
64 | T>I | No |
ClinGen TOPMed |
|
|
CA2879363 rs768251117 |
65 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1281245872 CA356565377 |
66 | V>L | No |
ClinGen gnomAD |
|
|
rs1363830519 CA356565389 |
68 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1379103614 CA356565409 |
70 | W>* | No |
ClinGen TOPMed |
|
|
CA93646432 rs889583762 |
71 | N>D | No |
ClinGen TOPMed |
|
|
rs762105687 CA2879366 |
73 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs762105687 CA356565424 |
73 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs114098271 CA93646467 |
75 | L>F | No |
ClinGen 1000Genomes TOPMed |
|
|
CA356565453 rs1230940212 |
77 | D>E | No |
ClinGen gnomAD |
|
|
CA2879369 rs761055208 |
77 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA356565459 rs1220925598 |
78 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1476024843 CA356565462 |
79 | G>E | No |
ClinGen gnomAD |
|
|
rs1025623272 CA93646494 |
79 | G>R | No |
ClinGen Ensembl |
|
|
rs1041318430 CA93646495 |
80 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA2879371 rs753807891 |
80 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA93646502 rs896896929 |
81 | K>R | No |
ClinGen TOPMed |
|
|
CA356565477 rs1164406354 |
82 | W>R | No |
ClinGen gnomAD |
|
| TCGA novel | 83 | S>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1460188501 CA356565778 |
85 | R>G | No |
ClinGen gnomAD |
|
|
CA2879399 rs533106793 |
85 | R>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA2879400 rs375619028 |
86 | D>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA356565795 rs533378583 |
87 | T>I | No |
ClinGen gnomAD |
|
|
CA93648231 rs533378583 |
87 | T>S | No |
ClinGen gnomAD |
|
|
CA2879401 rs751290402 |
89 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs1330412967 CA356565870 |
98 | I>F | No |
ClinGen gnomAD |
|
|
rs369523420 CA2879408 |
99 | G>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2879407 rs747267602 |
99 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879409 rs776921422 |
100 | R>I | No |
ClinGen ExAC gnomAD |
|
|
CA356565905 rs1335275175 |
103 | L>F | No |
ClinGen TOPMed |
|
| TCGA novel | 103 | L>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1224638755 CA356565908 |
104 | L>F | No |
ClinGen gnomAD |
|
|
rs1262952398 CA356565916 |
105 | L>P | No |
ClinGen gnomAD |
|
|
rs946695348 CA356565945 |
110 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs946695348 CA93648315 |
110 | F>V | No |
ClinGen TOPMed gnomAD |
|
|
rs78448446 CA93648337 |
112 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs78448446 CA2879416 |
112 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs754887557 CA2879418 |
116 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA356565991 rs1169286373 |
117 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA356565996 rs1560235960 |
118 | L>I | No |
ClinGen Ensembl |
|
|
CA2879420 rs752159311 |
120 | S>I | No |
ClinGen ExAC gnomAD |
|
|
CA2879422 rs565847214 |
121 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 121 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs534759029 CA2879423 |
122 | F>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1471220165 CA356566054 |
127 | G>R | No |
ClinGen TOPMed |
|
|
CA356566083 rs1262207301 |
129 | M>T | No |
ClinGen gnomAD |
|
|
rs1174686939 CA356566090 |
130 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1288539231 CA356566096 |
131 | G>E | No |
ClinGen TOPMed |
|
|
CA93650431 CA356566094 rs868708411 |
131 | G>R | No |
ClinGen gnomAD |
|
|
CA356566099 rs1227597338 |
132 | Q>K | No |
ClinGen TOPMed |
|
|
CA2879455 rs759265646 |
132 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
CA356566119 rs1276601969 |
134 | F>C | No |
ClinGen TOPMed |
|
|
rs756035307 CA2879457 |
135 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879458 rs552509301 |
136 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 137 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA93650524 rs1045107363 |
137 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1384719382 CA356566140 |
137 | S>T | No |
ClinGen gnomAD |
|
|
rs761261552 CA2879461 |
140 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1313059606 CA356566198 |
146 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA93653158 rs115723691 |
146 | G>V | No |
ClinGen 1000Genomes |
|
|
CA356566212 rs1577495314 |
148 | V>G | No |
ClinGen Ensembl |
|
|
rs1454056410 CA356566210 |
148 | V>L | No |
ClinGen Ensembl |
|
|
rs1241125360 CA356566218 |
149 | I>T | No |
ClinGen gnomAD |
|
|
CA356566215 rs1577495324 |
149 | I>V | No |
ClinGen Ensembl |
|
|
rs373310948 CA2879464 CA2879465 |
150 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA356566223 rs1245449652 |
150 | G>V | No |
ClinGen TOPMed |
|
|
CA356566230 rs1577495338 |
151 | V>G | No |
ClinGen Ensembl |
|
|
rs1429486561 CA356566225 |
151 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA2879466 rs754302028 |
153 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs201866415 CA2879467 |
154 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs75684712 CA2879468 |
155 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA356566260 rs1314702409 |
157 | V>L | No |
ClinGen TOPMed |
|
|
rs1420295743 CA356566268 |
158 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA356566275 rs748188355 |
159 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879469 rs748188355 |
159 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879470 rs758417658 |
161 | S>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 161 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2879471 rs777885336 |
164 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1179090320 CA356566308 |
164 | T>K | No |
ClinGen TOPMed gnomAD |
|
|
CA16040530 rs1179090320 |
164 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
CA93653267 rs777885336 |
164 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA356566310 rs1437422223 |
165 | S>A | No |
ClinGen TOPMed |
|
|
rs1469509708 CA356566320 |
166 | I>S | No |
ClinGen gnomAD |
|
|
CA2879476 rs768601894 |
167 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768601894 CA356566324 |
167 | V>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745908881 CA2879475 |
167 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356566328 rs1306369917 |
168 | V>F | No |
ClinGen TOPMed gnomAD |
|
|
rs899899540 CA93653322 |
169 | S>I | No |
ClinGen TOPMed |
|
|
rs774160853 CA2879477 |
170 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761328962 CA2879478 |
171 | V>E | No |
ClinGen ExAC gnomAD |
|
|
rs1450851553 CA356566349 |
171 | V>L | No |
ClinGen TOPMed |
|
|
rs1323934956 CA356566354 |
172 | S>A | No |
ClinGen gnomAD |
|
|
rs1202661099 CA356566357 |
172 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1202661099 CA356566355 |
172 | S>Y | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 173 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 175 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA93654703 rs943020177 |
176 | L>V | No |
ClinGen gnomAD |
|
|
CA2879496 rs748033823 |
177 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772182600 CA2879497 |
177 | T>I | No |
ClinGen ExAC |
|
|
rs1039280160 CA93654725 |
178 | V>I | No |
ClinGen Ensembl |
|
|
CA2879498 rs552759498 |
179 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760292711 CA2879500 |
179 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879499 rs760292711 |
179 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1226285 CA93654761 rs552759498 |
179 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA93654790 rs994395982 |
181 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA356566409 rs994395982 |
181 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA2879502 rs759287315 |
182 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356566417 rs1429372987 |
182 | I>S | No |
ClinGen gnomAD |
|
|
CA93654804 rs759287315 |
182 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356566420 rs1388417758 |
183 | P>A | No |
ClinGen gnomAD |
|
|
rs765511454 CA2879503 |
184 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 184 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2879504 rs765511454 |
184 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879506 rs560000806 |
185 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA93654843 rs865994371 |
186 | M>I | No |
ClinGen Ensembl |
|
|
rs139909093 CA356566440 |
186 | M>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139909093 CA2879507 |
186 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2879508 rs757338289 |
188 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA2879509 rs781418181 |
189 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA356566464 rs750598263 |
190 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879510 rs750598263 |
190 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879512 rs778542996 |
191 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs773901723 CA93654882 |
192 | T>A | No |
ClinGen TOPMed |
|
|
CA2879513 rs747996136 |
192 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356566483 rs1244217722 |
194 | I>V | No |
ClinGen gnomAD |
|
|
CA356566499 rs1279995565 |
196 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1560237944 CA356566509 |
198 | I>V | No |
ClinGen Ensembl |
|
|
rs746461033 CA2879516 |
199 | V>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 200 | A>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1292376724 CA356566521 |
200 | A>T | No |
ClinGen TOPMed |
|
|
CA2879517 rs770547360 |
200 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs992817594 CA93654941 |
201 | L>F | No |
ClinGen TOPMed |
|
|
CA356566539 rs1394661992 |
202 | M>I | No |
ClinGen TOPMed |
|
|
CA2879520 rs769533615 |
204 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs763342540 CA356566568 |
207 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763342540 CA2879522 |
207 | R>Q | Variant assessed as Somatic; 4.621e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA2879521 rs775671016 |
207 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA356566574 rs1431110029 |
208 | S>T | No |
ClinGen gnomAD |
|
|
rs566170283 CA356566633 |
214 | F>L | No |
ClinGen TOPMed |
|
|
CA2879542 rs774765778 |
216 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA93656759 rs528548762 |
217 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs528548762 CA2879544 |
217 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA93656757 rs1017010569 |
217 | A>P | No |
ClinGen TOPMed |
|
|
CA356566654 rs1364840975 |
219 | V>I | No |
ClinGen gnomAD |
|
|
rs1470096048 CA356566665 |
220 | H>P | No |
ClinGen TOPMed gnomAD |
|
|
CA93656766 rs201431617 |
221 | D>E | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs754095460 CA356566719 |
228 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754095460 CA2879548 |
228 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879549 rs755318649 |
229 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356566731 rs957622809 CA93656821 |
230 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen TOPMed gnomAD NCI-TCGA |
|
CA2879554 rs148403466 |
234 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2879553 rs148403466 |
234 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1577498860 CA356566775 |
236 | V>G | No |
ClinGen Ensembl |
|
|
CA356566769 rs1489202319 |
236 | V>L | No |
ClinGen TOPMed |
|
|
rs1354569469 CA356566785 |
237 | A>V | No |
ClinGen gnomAD |
|
|
CA2879555 rs755663472 |
238 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356566800 rs1215959671 |
239 | H>P | No |
ClinGen TOPMed |
|
| TCGA novel | 239 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs748938980 CA2879557 |
240 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879556 rs779601225 |
240 | Y>D | No |
ClinGen ExAC gnomAD |
|
|
CA356566829 rs77356826 |
242 | E>* | No |
ClinGen gnomAD |
|
|
CA93656875 rs77356826 |
242 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA2879559 rs771345195 |
244 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879560 rs748540626 |
244 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs955065752 CA93656888 |
245 | T>P | No |
ClinGen Ensembl |
|
|
rs773779289 CA2879562 |
246 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA356566888 rs1249616108 |
247 | L>P | No |
ClinGen gnomAD |
|
|
CA2879564 rs766475578 |
248 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA2879563 rs761139382 |
248 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879565 rs776889430 |
249 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1334997978 CA356566909 |
250 | E>K | No |
ClinGen gnomAD |
|
|
CA2879567 rs372932392 |
251 | S>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA356566927 rs1398829947 |
251 | S>I | No |
ClinGen TOPMed |
|
| TCGA novel | 253 | H>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA93656917 rs755505609 |
255 | K>N | No |
ClinGen Ensembl |
|
|
COSM1567358 CA356567002 rs751362507 |
257 | G>* | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs914989881 CA93656929 |
257 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA2879568 rs751362507 |
257 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA356567018 rs1305633157 |
258 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA356567025 rs1368069917 |
259 | D>Y | No |
ClinGen gnomAD |
|
|
rs757080528 CA2879569 |
260 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1329663398 CA356567050 |
261 | P>Q | No |
ClinGen gnomAD |
|
|
CA2879570 rs767301588 |
261 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1433172731 CA356567061 |
262 | D>G | No |
ClinGen gnomAD |
|
|
CA356567063 rs1433172731 |
262 | D>V | No |
ClinGen gnomAD |
|
| TCGA novel | 262 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1270926255 CA356567073 |
263 | L>H | No |
ClinGen gnomAD |
|
| TCGA novel | 264 | L>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2879573 rs779511287 |
265 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA2879574 rs748849027 |
268 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA2879576 rs778538325 |
270 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754578808 CA2879575 |
270 | P>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 274 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs375836606 CA2879578 |
274 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1248328642 CA356567194 |
275 | I>L | No |
ClinGen gnomAD |
|
|
CA356567350 rs1388316871 |
280 | K>* | No |
ClinGen gnomAD |
|
|
rs982150295 CA93657774 |
280 | K>I | No |
ClinGen TOPMed gnomAD |
|
|
rs982150295 CA356567353 |
280 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
RCV000968936 rs79937695 CA2879600 |
281 | K>E | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA2879601 rs747355268 |
281 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA356567368 rs1403002865 |
282 | V>A | No |
ClinGen gnomAD |
|
|
rs1223366439 CA356567365 |
282 | V>I | No |
ClinGen TOPMed |
|
|
rs758895971 CA93657805 |
287 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs771522281 CA2879602 |
288 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA93657836 rs150930496 |
289 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed |
|
rs140631105 CA2879604 |
289 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2879605 rs769981964 |
290 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769981964 CA2879606 |
290 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1402547020 CA356567426 |
291 | E>Q | No |
ClinGen TOPMed |
|
|
rs372023023 CA2879607 |
293 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 295 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 295 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 295 | N>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1577499883 CA356567462 |
296 | K>E | No |
ClinGen Ensembl |
|
|
CA356567465 rs1483366865 |
296 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs531268967 CA2879609 |
297 | S>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1421434088 CA356567482 |
299 | V>I | No |
ClinGen gnomAD |
|
| TCGA novel | 300 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2879610 rs760496504 |
300 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA2879612 rs753759730 |
301 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA2879611 rs766244885 |
301 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA356567497 rs766244885 |
301 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA93657917 rs968407909 |
301 | I>V | No |
ClinGen Ensembl |
|
|
rs1428504117 CA356567505 |
302 | W>C | No |
ClinGen TOPMed |
|
|
rs375862993 CA2879613 |
302 | W>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA356567517 rs1197446411 |
304 | K>* | No |
ClinGen TOPMed |
|
|
rs1378483202 CA356567538 |
307 | T>P | No |
ClinGen gnomAD |
|
|
CA356567548 CA2879615 rs752197307 |
308 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879614 rs764692447 |
308 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA2879616 rs758019128 |
309 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1418396668 CA356567571 |
310 | T>S | No |
ClinGen TOPMed |
|
|
RCV000964959 CA2879640 rs112461275 |
312 | I>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs371683311 CA93658783 |
314 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed gnomAD |
|
rs780459503 CA2879642 |
315 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356567605 rs749325501 |
316 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879643 rs749325501 |
316 | V>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 318 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA356567621 rs1239009061 |
318 | S>W | No |
ClinGen TOPMed |
|
|
CA2879645 rs74775366 |
322 | C>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA356567659 rs1406242794 |
324 | S>F | No |
ClinGen TOPMed |
|
|
CA2879648 rs142510757 |
325 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs745693733 CA2879649 |
328 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA2879650 rs79450009 |
330 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2879651 rs79450009 |
330 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2879653 rs763509268 |
331 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
CA356567705 rs1296266971 |
332 | G>S | No |
ClinGen gnomAD |
|
|
CA356567765 rs1362335015 |
339 | K>N | No |
ClinGen gnomAD |
|
|
rs200560714 CA2879654 |
340 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA356567773 rs1321628742 |
341 | V>M | No |
ClinGen gnomAD |
|
|
rs1560240149 CA356567783 |
342 | T>I | No |
ClinGen Ensembl |
|
|
rs149375438 CA2879656 |
342 | T>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1014669572 CA93658869 |
343 | Y>* | No |
ClinGen TOPMed |
|
|
CA356567789 rs1262834719 |
343 | Y>F | No |
ClinGen gnomAD |
|
|
CA2879657 rs750781565 |
344 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1268215258 CA356567798 |
345 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs756443417 CA2879658 |
347 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356567819 rs1296496065 |
347 | I>S | No |
ClinGen TOPMed gnomAD |
|
|
CA356567818 rs1296496065 |
347 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs995352868 COSM1054676 CA356567821 |
348 | A>S | endometrium [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA93658898 rs995352868 |
348 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA356567826 rs1182511455 |
349 | K>E | No |
ClinGen gnomAD |
|
|
CA2879676 rs377419850 |
351 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs148080437 CA2879677 |
353 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs759907304 CA2879678 |
355 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1488051982 CA356568181 |
357 | F>L | No |
ClinGen TOPMed |
|
|
CA2879682 rs138755203 |
360 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2879683 rs138755203 |
360 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs758484073 CA2879681 |
360 | P>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 363 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA356568336 rs1181236105 |
366 | T>I | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 367 | I>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA356568342 rs768442620 |
367 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768442620 CA2879687 |
367 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1218828502 CA356568378 |
369 | L>I | No |
ClinGen TOPMed |
|
|
CA356568399 rs1423857252 |
370 | I>K | No |
ClinGen gnomAD |
|
|
rs1423857252 CA356568401 |
370 | I>T | No |
ClinGen gnomAD |
|
|
rs915538683 CA93660276 |
370 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA356568444 rs1453645256 |
375 | V>L | No |
ClinGen gnomAD |
|
|
CA356568449 rs1169918983 |
376 | L>I | No |
ClinGen gnomAD |
|
|
rs1371773112 CA356568454 |
376 | L>P | No |
ClinGen gnomAD |
|
|
rs1173859771 CA356568467 |
378 | G>A | No |
ClinGen gnomAD |
|
| TCGA novel | 381 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA356568489 rs1306601216 |
382 | M>V | No |
ClinGen gnomAD |
|
|
CA2879690 rs771701778 |
383 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA356568519 rs1274419196 |
386 | I>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA93660313 rs868371878 |
389 | S>F | No |
ClinGen Ensembl |
|
|
CA2879691 rs772886127 |
390 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs760218005 CA2879692 |
391 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770634792 CA2879693 |
392 | K>* | No |
ClinGen ExAC gnomAD |
|
|
rs1451015654 CA356568557 |
392 | K>N | No |
ClinGen TOPMed |
|
|
CA356568554 rs1319054788 |
392 | K>R | No |
ClinGen TOPMed |
|
|
rs1204290211 CA356568560 |
393 | G>W | No |
ClinGen gnomAD |
|
|
CA356568565 rs1360348032 |
394 | Q>E | No |
ClinGen TOPMed |
|
|
CA356568572 rs1176382844 |
395 | V>I | No |
ClinGen TOPMed |
|
|
rs560657112 CA2879696 |
396 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA2879697 rs765673564 |
398 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1577502425 COSM587045 CA356568645 |
402 | T>N | lung [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs141905062 COSM1291897 CA2879698 |
403 | I>V | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs767634415 CA2879743 |
406 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1304696561 CA356568853 |
406 | D>G | No |
ClinGen gnomAD |
|
|
rs764129224 CA2879700 |
406 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356568998 rs1577503654 |
412 | A>S | No |
ClinGen Ensembl |
|
|
CA356569006 rs1353482968 |
412 | A>V | No |
ClinGen gnomAD |
|
|
rs766735856 COSM1694221 CA2879747 |
413 | W>* | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA93661637 rs112928137 |
413 | W>R | No |
ClinGen Ensembl |
|
|
rs76404281 RCV000971876 CA2879748 CA356569057 |
414 | L>F | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA356569078 rs763851809 |
416 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763851809 CA2879750 |
416 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757181024 CA2879752 |
417 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs1577503702 CA356569099 |
417 | Y>S | No |
ClinGen Ensembl |
|
|
rs780731923 CA2879753 |
418 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356569118 rs780731923 |
418 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356569151 rs1251501328 |
419 | A>D | No |
ClinGen gnomAD |
|
|
CA356569141 COSM1186543 rs1183400797 |
419 | A>S | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA356569161 rs1212536813 |
420 | I>L | No |
ClinGen TOPMed |
|
|
CA2879755 rs755725918 |
421 | L>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879756 rs755725918 |
421 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs116219115 CA2879758 |
422 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA93661698 CA2879760 rs769110830 |
423 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356569255 rs1328096499 |
424 | A>V | No |
ClinGen gnomAD |
|
|
rs1308433103 CA356569265 |
425 | G>S | No |
ClinGen gnomAD |
|
|
rs773301208 CA2879762 |
426 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs978269433 CA93661753 |
427 | T>A | No |
ClinGen Ensembl |
|
|
rs776977311 CA2879765 |
428 | F>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 428 | F>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771219442 CA2879764 COSM447749 |
428 | F>L | breast [Cosmic] | No |
ClinGen cosmic curated ExAC |
|
rs1331309166 CA356570061 |
429 | I>V | No |
ClinGen gnomAD |
|
|
CA2879767 rs201539404 |
430 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA356570102 rs1292179461 |
432 | S>N | No |
ClinGen gnomAD |
|
|
CA2879768 rs751360382 |
432 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879769 rs761761874 |
433 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA2879770 rs767387893 |
436 | F>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 437 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2879771 rs749870943 |
437 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA356570164 rs749870943 |
437 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200073812 CA2879773 |
438 | S>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA356570192 rs1192196621 |
441 | T>N | No |
ClinGen TOPMed |
|
|
rs1577503836 CA356570186 |
441 | T>P | No |
ClinGen Ensembl |
|
|
CA2879779 rs772561415 |
442 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778435287 CA356570209 |
443 | L>M | No |
ClinGen ExAC |
|
|
rs778435287 CA2879782 |
443 | L>V | No |
ClinGen ExAC |
|
|
rs1167220392 CA356570291 |
445 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs200795814 CA2879804 |
446 | I>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1259023473 CA356570329 |
447 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA93662070 rs866816525 |
447 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs76854178 CA93662096 |
448 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs76854178 CA2879807 |
448 | V>M | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1270314548 CA356570407 |
451 | I>F | No |
ClinGen gnomAD |
|
|
rs771851891 CA2879810 |
457 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA93662120 rs771851891 |
457 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879811 rs200499595 |
458 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA356570583 rs760586486 |
458 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760586486 CA2879812 |
458 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1349186972 CA356570599 |
459 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA2879815 rs758978788 |
461 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1413783999 CA356570671 |
462 | N>K | No |
ClinGen gnomAD |
|
|
CA356570682 rs1457416500 |
463 | I>F | No |
ClinGen gnomAD |
|
|
rs115151720 CA2879817 |
464 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs115151720 CA2879816 |
464 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1355369590 CA356570728 |
465 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs199692975 CA93662183 |
467 | T>P | No |
ClinGen Ensembl |
|
|
rs201392996 CA2879822 |
469 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1742641 CA2879827 rs377112763 |
473 | A>T | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1258211926 CA356570877 |
473 | A>V | No |
ClinGen gnomAD |
|
|
CA93662271 rs982148536 |
475 | A>S | No |
ClinGen Ensembl |
|
|
rs772947084 CA2879829 |
476 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA2879832 rs369254101 |
483 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2879834 rs375377923 |
485 | L>F | No |
ClinGen ESP ExAC |
|
| rs867296079 | 487 | I>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2879861 rs767745165 |
487 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 488 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1410822906 CA356571005 |
488 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs750852077 CA2879862 |
489 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1206153018 CA356571012 |
489 | L>V | No |
ClinGen TOPMed |
|
|
rs761041179 CA2879863 |
490 | C>* | No |
ClinGen ExAC |
|
|
CA2879864 rs371691747 |
492 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1475358288 CA356571044 |
493 | F>L | No |
ClinGen gnomAD |
|
|
rs1374202786 CA356571039 |
493 | F>V | No |
ClinGen gnomAD |
|
|
rs867302694 CA93663602 |
498 | G>D | No |
ClinGen Ensembl |
|
|
CA356571074 rs1022453751 |
498 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1022453751 CA93663569 |
498 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA356571084 rs1313344843 |
499 | I>M | No |
ClinGen TOPMed |
|
|
rs1392536681 CA356571080 |
499 | I>V | No |
ClinGen gnomAD |
|
|
CA356571096 rs1321264988 |
501 | L>R | No |
ClinGen gnomAD |
|
|
rs752882870 CA2879868 |
502 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780800769 CA2879870 |
504 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs758667043 CA2879869 |
504 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs200297029 CA93663662 |
505 | I>T | No |
ClinGen Ensembl |
|
|
CA356571126 rs769551404 |
506 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA2879872 rs769551404 |
506 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs866234217 CA93663681 |
506 | P>S | No |
ClinGen Ensembl |
|
|
CA93663700 rs967754975 |
508 | T>I | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 508 | T>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1577505495 CA356571135 |
508 | T>P | No |
ClinGen Ensembl |
|
|
rs34751784 CA93663702 |
509 | R>C | No |
ClinGen gnomAD |
|
|
rs34751784 CA356571141 |
509 | R>G | No |
ClinGen gnomAD |
|
|
CA356571157 rs1422630929 |
512 | I>V | No |
ClinGen TOPMed |
|
|
rs147732740 CA2879876 |
513 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2879875 RCV000909241 rs147732740 |
513 | R>G | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA2879877 rs115874588 COSM447750 |
513 | R>H | Variant assessed as Somatic; 4.621e-05 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs960372872 CA356571167 |
514 | M>L | No |
ClinGen gnomAD |
|
|
rs960372872 CA93663717 |
514 | M>V | No |
ClinGen gnomAD |
|
| TCGA novel | 515 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA356571194 rs565728265 |
518 | L>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1458981472 CA356571197 |
518 | L>P | No |
ClinGen gnomAD |
|
|
CA2879880 rs773412999 |
519 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs201181333 CA93663737 |
523 | A>T | No |
ClinGen gnomAD |
|
|
CA356571248 rs1415224624 |
526 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA2879883 rs115131445 |
526 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1292418842 CA356571258 |
527 | W>C | No |
ClinGen gnomAD |
|
|
rs760073369 CA356571267 |
528 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879885 rs372824816 |
529 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs752794996 CA2879886 |
530 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed |
|
CA93663804 rs868535475 |
531 | F>V | No |
ClinGen Ensembl |
|
|
CA356571298 rs764381388 |
532 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA2879888 rs758507678 |
532 | Y>S | No |
ClinGen ExAC |
|
|
CA356571317 rs1319890768 |
534 | I>F | No |
ClinGen TOPMed |
|
|
rs1227346120 COSM733650 CA356571346 |
536 | F>I | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA356571384 rs1258935311 |
538 | F>I | No |
ClinGen gnomAD |
|
|
rs1258935311 CA356571388 |
538 | F>L | No |
ClinGen gnomAD |
|
|
CA356571454 rs779781092 |
541 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA2879893 rs779781092 |
541 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs778521171 CA2879896 |
543 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879897 rs747696561 COSM1226284 |
543 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs771562085 CA2879898 |
544 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356571493 rs771562085 |
544 | V>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879899 rs377166831 |
545 | F>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368834147 CA2879900 |
547 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs771292841 CA2879901 |
548 | S>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 550 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs115500754 CA2879903 |
553 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA2879905 rs775481758 |
553 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs115500754 COSM733649 CA93663914 |
553 | R>W | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA356571678 rs1577505745 |
554 | V>G | No |
ClinGen Ensembl |
|
|
rs1236301699 CA356571671 |
554 | V>L | No |
ClinGen gnomAD |
|
|
rs1236301699 CA356571668 |
554 | V>M | No |
ClinGen gnomAD |
|
|
rs891098704 CA356571682 |
555 | L>V | No |
ClinGen gnomAD |
|
|
rs1378920926 CA356571703 |
556 | V>F | No |
ClinGen TOPMed |
|
|
rs763108345 CA2879906 |
557 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs142545132 CA93663961 |
558 | V>A | No |
ClinGen ESP TOPMed |
|
|
rs1278633292 CA356571753 |
559 | G>R | No |
ClinGen gnomAD |
|
|
rs964288475 CA93663969 |
560 | V>G | No |
ClinGen Ensembl |
|
| TCGA novel | 561 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 562 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 563 | V>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1417525170 CA356571835 |
563 | V>D | No |
ClinGen gnomAD |
|
|
CA356571830 rs766256521 |
563 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA2879910 COSM3133349 rs766256521 |
563 | V>I | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs753711680 CA356571863 |
564 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1388696450 CA356571889 |
566 | I>V | No |
ClinGen gnomAD |
|
|
CA356571924 rs1560243447 |
567 | I>M | No |
ClinGen Ensembl |
|
|
rs1240865106 CA356571922 |
567 | I>N | No |
ClinGen TOPMed |
|
|
CA2879912 rs754928705 |
569 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356571973 rs1172865461 |
571 | C>G | No |
ClinGen gnomAD |
|
|
CA356571984 rs1373554521 |
572 | L>F | No |
ClinGen gnomAD |
|
|
rs144863385 CA2879915 |
572 | L>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs144863385 CA356571992 |
572 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA2879916 rs777185101 |
573 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA356572013 rs1389272646 |
574 | L>F | No |
ClinGen gnomAD |
|
|
CA356572052 rs1203130119 |
576 | Q>R | No |
ClinGen Ensembl |
|
|
CA2879920 rs538449848 |
578 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA93664033 rs538449848 |
578 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879922 rs775964069 |
579 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356572415 rs763437727 |
580 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763437727 CA2879923 |
580 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356572423 rs1577505943 |
581 | R>C | No |
ClinGen Ensembl |
|
|
CA2879925 COSM1054678 rs774345090 |
581 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA356572437 rs140514938 |
582 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2879929 rs140514938 |
582 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs765186413 CA2879930 |
583 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM1429272 CA2879932 rs758313049 |
584 | P>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA2879931 rs61740663 |
584 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 585 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1264773283 CA356572482 |
586 | K>* | No |
ClinGen TOPMed |
|
|
CA356572499 rs1170905735 |
587 | L>H | No |
ClinGen gnomAD |
|
|
CA356572495 rs1412219986 |
587 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1022087472 CA93664165 |
594 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1327576349 CA356572592 |
594 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA356572594 rs1327576349 |
594 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1022087472 CA356572588 |
594 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA2879934 rs138158613 |
595 | L>P | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1323270465 CA356572631 |
597 | M>I | No |
ClinGen gnomAD |
|
|
COSM292460 rs756835851 CA2879935 |
598 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs780836430 CA2879936 |
598 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA356572642 rs780836430 |
598 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756835851 CA356572635 |
598 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs116358149 TCGA novel CA93664188 |
599 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD NCI-TCGA |
|
CA2879937 rs116358149 |
599 | S>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs116358149 CA356572651 |
599 | S>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs770112348 CA356572655 |
600 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs903704817 CA93664206 |
601 | K>Q | No |
ClinGen Ensembl |
|
|
rs1274106130 CA356572671 |
601 | K>R | No |
ClinGen gnomAD |
|
|
CA93664212 rs1001924803 |
602 | P>S | No |
ClinGen Ensembl |
|
|
CA2879939 rs780348999 |
603 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs75359384 CA93664218 |
603 | W>G | No |
ClinGen Ensembl |
|
|
rs749787280 CA2879940 |
604 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs369547850 CA2879941 COSM1054680 |
606 | V>I | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA2879943 rs761826151 |
607 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs199853390 COSM1739047 CA356572728 |
607 | V>I | haematopoietic_and_lymphoid_tissue Variant assessed as Somatic; 4.625e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs199853390 CA93664277 |
607 | V>L | No |
ClinGen gnomAD |
|
|
rs772368155 CA2879944 |
609 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs116673562 CA2879945 |
609 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs761049513 CA2879946 |
610 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA2879949 rs765114627 |
612 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA2879948 rs765114627 |
612 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA2879947 rs765114627 |
612 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA93664345 rs556551664 |
613 | C>Y | No |
ClinGen gnomAD |
|
|
CA356572781 rs1360474771 |
615 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA356572786 rs1464270773 |
616 | M>K | No |
ClinGen TOPMed |
|
|
CA2879951 rs374543043 COSM1226287 |
617 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP TOPMed |
|
rs1417065596 CA356572793 |
617 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA2879953 rs763970739 |
618 | C>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 618 | C>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA356572799 rs763970739 |
618 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA93664371 rs991877151 |
620 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA93664399 rs1016252352 |
622 | C>* | No |
ClinGen Ensembl |
|
|
rs1317664145 CA356572835 |
623 | R>C | No |
ClinGen gnomAD |
|
|
rs1215136729 CA356572836 |
623 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA356572840 rs1560243859 |
624 | V>A | No |
ClinGen Ensembl |
|
|
CA2879958 CA2879959 rs372833249 |
624 | V>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs372833249 CA2879960 |
624 | V>M | No |
ClinGen ESP ExAC gnomAD |
|
|
rs780406724 CA2879965 |
626 | C>G | No |
ClinGen ExAC gnomAD |
|
|
rs780406724 CA356572850 |
626 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA2879966 rs749617387 |
626 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs377357118 CA2879967 |
627 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377357118 CA93664442 |
627 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA93664445 rs974734046 |
627 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA2879969 rs748709275 |
628 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs932836843 CA93664470 COSM447752 |
628 | A>V | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs77129821 CA2879974 |
630 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1343993902 CA356572882 |
631 | L>W | No |
ClinGen gnomAD |
|
|
CA356572895 rs1477308873 |
633 | C>Y | No |
ClinGen gnomAD |
|
|
rs6448389 CA356572902 |
634 | D>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs6448389 CA356572901 |
634 | D>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs774124314 CA2879978 |
635 | C>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1374299739 CA356572913 |
636 | P>S | No |
ClinGen gnomAD |
|
|
rs766999791 CA356572943 |
640 | R>C | No |
ClinGen ExAC TOPMed |
|
|
rs766999791 CA2879981 |
640 | R>G | No |
ClinGen ExAC TOPMed |
|
|
rs374537882 CA2879982 COSM270169 |
640 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA356572942 rs766999791 |
640 | R>S | No |
ClinGen ExAC TOPMed |
|
|
CA356572947 rs1351450858 |
641 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
rs755695232 CA2879983 |
644 | C>G | No |
ClinGen ExAC gnomAD |
|
|
CA2879984 rs765975386 |
644 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1239027168 CA356572982 |
645 | C>* | No |
ClinGen TOPMed |
|
|
CA356572977 rs1459216491 |
645 | C>R | No |
ClinGen TOPMed |
|
|
CA2879985 COSM1429274 rs754178434 |
646 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA2879986 rs755271436 |
648 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1010061802 CA93664555 |
650 | E>K | No |
ClinGen TOPMed |
|
|
rs548315834 CA2879987 |
651 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs548315834 CA2879988 |
651 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA356573026 rs1292174866 |
652 | Q>* | No |
ClinGen TOPMed |
|
|
CA2879992 rs747118884 |
652 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2879991 rs747118884 |
652 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs866758031 CA93664625 |
653 | E>G | No |
ClinGen Ensembl |
|
|
rs1560244077 CA356573031 |
653 | E>Q | No |
ClinGen Ensembl |
|
|
CA2879993 rs776696165 |
655 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA2879994 rs776696165 |
655 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs768332363 CA2879995 |
655 | Q>R | No |
ClinGen ExAC |
|
|
rs761679756 CA2879997 |
656 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA2879996 rs779048099 |
656 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1577506439 CA356573057 |
657 | V>G | No |
ClinGen Ensembl |
|
|
rs772666393 CA2879999 |
658 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs760197776 CA93664661 |
661 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs945288110 CA93664652 |
661 | A>S | No |
ClinGen Ensembl |
|
|
CA2880000 rs760197776 |
661 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs867649889 CA93664667 |
662 | P>S | No |
ClinGen Ensembl |
|
|
CA356573087 rs1242781682 |
663 | E>K | No |
ClinGen TOPMed |
|
| TCGA novel | 664 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA356573115 rs1378570238 |
666 | D>E | No |
ClinGen TOPMed |
|
|
rs376344748 CA2880001 |
668 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1560244146 CA356573141 |
670 | I>T | No |
ClinGen Ensembl |
|
|
CA356573139 rs1373201943 |
670 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA93664676 rs201145885 |
671 | S>I | No |
ClinGen 1000Genomes |
|
|
CA356573154 rs1484381895 |
672 | R>T | No |
ClinGen Ensembl |
|
|
CA356573162 rs1304146549 |
673 | E>G | No |
ClinGen gnomAD |
|
|
CA2880003 rs754721602 |
674 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 674 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2880004 rs765465820 |
677 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs753118743 CA2880005 |
678 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1324991208 CA356573213 |
681 | S>W | No |
ClinGen TOPMed |
|
|
CA2880007 rs778449544 |
682 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA93664704 rs865848979 |
682 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs865848979 CA356573216 |
682 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs747570357 CA2880008 |
686 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA2880009 rs138734284 |
687 | C>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs746063666 CA356573274 |
691 | L>K | No |
ClinGen ExAC gnomAD |
|
|
CA2880012 rs746063666 |
691 | L>Q | No |
ClinGen ExAC gnomAD |
2 associated diseases with O95436
[MIM: 265100]: Pulmonary alveolar microlithiasis (PULAM)
Rare disease characterized by the deposition of calcium phosphate microliths throughout the lungs. Most patients are asymptomatic for several years or even for decades and generally, the diagnosis is incidental to clinical investigations unrelated to the disease. Cases with early-onset or rapid progression are rare. A 'sandstorm-appearing' chest roentgenogram is a typical diagnostic finding. The onset of this potentially lethal disease varies from the neonatal period to old age and the disease follows a long-term, progressive course, resulting in a slow deterioration of lung functions. Pulmonary alveolar microlithiasis is a recessive monogenic disease with full penetrance. {ECO:0000269|PubMed:16960801}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- Rare disease characterized by the deposition of calcium phosphate microliths throughout the lungs. Most patients are asymptomatic for several years or even for decades and generally, the diagnosis is incidental to clinical investigations unrelated to the disease. Cases with early-onset or rapid progression are rare. A 'sandstorm-appearing' chest roentgenogram is a typical diagnostic finding. The onset of this potentially lethal disease varies from the neonatal period to old age and the disease follows a long-term, progressive course, resulting in a slow deterioration of lung functions. Pulmonary alveolar microlithiasis is a recessive monogenic disease with full penetrance. {ECO:0000269|PubMed:16960801}. Note=The disease is caused by variants affecting the gene represented in this entry.
No regional properties for O95436
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for O95436 | |||
7 GO annotations of cellular component
| Name | Definition |
|---|---|
| apical plasma membrane | The region of the plasma membrane located at the apical end of the cell. |
| brush border | The dense covering of microvilli on the apical surface of an epithelial cell in tissues such as the intestine, kidney, and choroid plexus; the microvilli aid absorption by increasing the surface area of the cell. |
| brush border membrane | The portion of the plasma membrane surrounding the brush border. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| vesicle | Any small, fluid-filled, spherical organelle enclosed by membrane. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| phosphate ion binding | Binding to a phosphate ion. |
| sodium ion binding | Binding to a sodium ion (Na+). |
| sodium:phosphate symporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + phosphate(out) = Na+(in) + phosphate(in). |
6 GO annotations of biological process
| Name | Definition |
|---|---|
| cellular phosphate ion homeostasis | Any process involved in the maintenance of an internal steady state of phosphate ions at the level of a cell. |
| in utero embryonic development | The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth. An example of this process is found in Mus musculus. |
| phosphate ion transport | The directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| protein metabolic process | The chemical reactions and pathways involving a protein. Includes protein modification. |
| response to estrogen | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics. |
| sodium-dependent phosphate transport | The directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore, by a mechanism dependent upon sodium ions. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAPWPELGDA | QPNPDKYLEG | AAGQQPTAPD | KSKETNKTDN | TEAPVTKIEL | LPSYSTATLI |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DEPTEVDDPW | NLPTLQDSGI | KWSERDTKGK | ILCFFQGIGR | LILLLGFLYF | FVCSLDILSS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| AFQLVGGKMA | GQFFSNSSIM | SNPLLGLVIG | VLVTVLVQSS | STSTSIVVSM | VSSSLLTVRA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| AIPIIMGANI | GTSITNTIVA | LMQVGDRSEF | RRAFAGATVH | DFFNWLSVLV | LLPVEVATHY |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LEIITQLIVE | SFHFKNGEDA | PDLLKVITKP | FTKLIVQLDK | KVISQIAMND | EKAKNKSLVK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| IWCKTFTNKT | QINVTVPSTA | NCTSPSLCWT | DGIQNWTMKN | VTYKENIAKC | QHIFVNFHLP |
| 370 | 380 | 390 | 400 | 410 | 420 |
| DLAVGTILLI | LSLLVLCGCL | IMIVKILGSV | LKGQVATVIK | KTINTDFPFP | FAWLTGYLAI |
| 430 | 440 | 450 | 460 | 470 | 480 |
| LVGAGMTFIV | QSSSVFTSAL | TPLIGIGVIT | IERAYPLTLG | SNIGTTTTAI | LAALASPGNA |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LRSSLQIALC | HFFFNISGIL | LWYPIPFTRL | PIRMAKGLGN | ISAKYRWFAV | FYLIIFFFLI |
| 550 | 560 | 570 | 580 | 590 | 600 |
| PLTVFGLSLA | GWRVLVGVGV | PVVFIIILVL | CLRLLQSRCP | RVLPKKLQNW | NFLPLWMRSL |
| 610 | 620 | 630 | 640 | 650 | 660 |
| KPWDAVVSKF | TGCFQMRCCC | CCRVCCRACC | LLCDCPKCCR | CSKCCEDLEE | AQEGQDVPVK |
| 670 | 680 | ||||
| APETFDNITI | SREAQGEVPA | SDSKTECTAL |