O14786
Gene name |
NRP1 |
Protein name |
Neuropilin-1 |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:8829 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
24 structures for O14786
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 1KEX | X-ray | 190 A | A | 273-427 | PDB |
| 2QQI | X-ray | 180 A | A | 273-586 | PDB |
| 2QQM | X-ray | 200 A | A | 141-586 | PDB |
| 2QQN | X-ray | 220 A | A | 273-427 | PDB |
| 3I97 | X-ray | 290 A | A/B | 273-427 | PDB |
| 4DEQ | X-ray | 265 A | A/B | 274-429 | PDB |
| 4RN5 | X-ray | 173 A | A | 273-427 | PDB |
| 5C7G | X-ray | 145 A | A | 273-427 | PDB |
| 5IJR | X-ray | 152 A | A/B | 273-427 | PDB |
| 5IYY | X-ray | 160 A | A/B | 273-427 | PDB |
| 5J1X | X-ray | 210 A | A/B/C/D | 273-427 | PDB |
| 5JGI | X-ray | 138 A | A/B | 273-427 | PDB |
| 5JGQ | X-ray | 160 A | A/B | 273-427 | PDB |
| 5JHK | X-ray | 180 A | A/B | 273-427 | PDB |
| 5L73 | X-ray | 224 A | A/B | 628-813 | PDB |
| 6FMC | X-ray | 090 A | A | 273-427 | PDB |
| 6FMF | X-ray | 281 A | A | 273-427 | PDB |
| 6TKK | X-ray | 106 A | A | 273-427 | PDB |
| 7JJC | X-ray | 236 A | A/B/C/D | 273-427 | PDB |
| 7O1N | X-ray | 156 A | A | 273-427 | PDB |
| 7P5U | X-ray | 160 A | AAA/BBB | 273-427 | PDB |
| 8C5G | X-ray | 270 A | A/B | 271-586 | PDB |
| 8PFE | X-ray | 135 A | A/C | 273-427 | PDB |
| AF-O14786-F1 | Predicted | AlphaFoldDB |
696 variants for O14786
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1482222602 CA376510569 |
2 | E>D | No |
ClinGen gnomAD |
|
|
rs757732321 CA5467060 |
3 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA206005821 rs866275912 |
3 | R>K | No |
ClinGen TOPMed |
|
|
CA206005819 rs953208828 |
3 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA206005820 rs866275912 |
3 | R>T | No |
ClinGen TOPMed |
|
|
rs1282658453 CA376510548 |
7 | L>F | No |
ClinGen gnomAD |
|
|
CA5467058 rs764282718 |
7 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760822303 CA376510542 |
8 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760822303 CA5467057 |
8 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1341197483 CA376510536 |
9 | C>G | No |
ClinGen TOPMed |
|
|
rs1377623827 CA376510504 |
14 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1311811089 CA376510503 |
14 | L>R | No |
ClinGen gnomAD |
|
|
rs1377623827 CA376510505 |
14 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs374322029 CA5467055 |
15 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1166283194 CA376510495 |
16 | L>I | No |
ClinGen gnomAD |
|
|
CA376510483 rs1373477482 |
18 | P>T | No |
ClinGen gnomAD |
|
|
rs1422054694 CA376510477 |
19 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1255367960 CA376510469 |
20 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
CA376510471 rs1255367960 |
20 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1486018391 CA376510463 |
21 | A>D | No |
ClinGen gnomAD |
|
|
rs894220185 CA206005812 |
21 | A>T | No |
ClinGen gnomAD |
|
|
CA5467052 rs770720421 |
23 | R>C | No |
ClinGen ExAC |
|
|
rs1174726719 CA376510446 |
24 | N>D | No |
ClinGen TOPMed |
|
|
CA376510442 rs1259904998 |
24 | N>S | No |
ClinGen gnomAD |
|
|
CA376510438 rs1338952516 |
25 | D>H | No |
ClinGen gnomAD |
|
|
rs374276976 CA5467038 |
29 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA376510393 rs1386346760 |
29 | D>V | No |
ClinGen gnomAD |
|
|
rs867341914 CA206005139 |
31 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs746772930 CA206005137 |
32 | K>N | No |
ClinGen Ensembl |
|
|
CA376510374 rs1258659568 |
32 | K>R | No |
ClinGen TOPMed |
|
|
CA5467037 rs759708920 |
33 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA376510354 rs1184185740 |
35 | S>N | No |
ClinGen gnomAD |
|
|
rs751738413 CA5467036 |
36 | P>L | No |
ClinGen ExAC |
|
|
CA376510295 rs1270349204 |
44 | Y>F | No |
ClinGen TOPMed |
|
|
CA376510289 rs1479432602 |
45 | P>S | No |
ClinGen TOPMed |
|
|
CA206005125 rs964215241 |
49 | H>Q | No |
ClinGen TOPMed |
|
|
rs761687731 CA5467031 |
49 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1402299798 CA376510255 |
50 | P>S | No |
ClinGen TOPMed |
|
|
rs1156630275 CA376510247 |
51 | S>N | No |
ClinGen TOPMed |
|
|
CA5467030 rs776148094 |
53 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA5467029 rs768142109 |
54 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA376510221 rs1230660558 |
55 | E>K | No |
ClinGen gnomAD |
|
|
CA5467027 rs779741661 |
59 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA376510189 rs1303960267 |
59 | Q>R | No |
ClinGen gnomAD |
|
|
rs771267477 CA5467026 |
61 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1358919959 CA376510168 |
62 | D>E | No |
ClinGen TOPMed |
|
|
rs1419281327 CA376510164 |
63 | P>S | No |
ClinGen TOPMed |
|
|
CA376510160 rs1564496635 |
64 | Y>N | No |
ClinGen Ensembl |
|
|
CA5467022 rs371886197 |
65 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 66 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA376510142 rs1385818807 |
66 | R>T | No |
ClinGen gnomAD |
|
|
rs751789763 CA5467019 |
68 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs755031065 CA5467020 |
68 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5467021 rs781138129 |
68 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA5467017 rs762780832 |
73 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs750237365 CA5467016 |
74 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1285825996 CA376510071 |
76 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1448051089 CA376510074 |
76 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA376510062 rs1346722965 |
77 | L>F | No |
ClinGen gnomAD |
|
|
rs1043147971 CA206005104 |
77 | L>M | No |
ClinGen Ensembl |
|
|
CA376510043 rs1305279518 |
80 | R>* | No |
ClinGen TOPMed |
|
| TCGA novel | 80 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs775797226 CA206005100 |
83 | K>E | No |
ClinGen gnomAD |
|
|
CA205491271 rs779448802 |
87 | V>A | No |
ClinGen Ensembl |
|
|
rs753783818 CA5466995 |
87 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs533652148 COSM1347668 CA5466993 |
91 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA376483758 rs1401090199 |
95 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs767096379 CA5466991 |
96 | N>S | No |
ClinGen ExAC |
|
|
rs775089363 CA5466992 |
96 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
CA5466990 rs759268484 |
97 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA205491223 rs1016982339 |
98 | H>P | No |
ClinGen TOPMed |
|
| TCGA novel | 99 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1163348245 CA376483720 |
100 | R>M | No |
ClinGen gnomAD |
|
|
rs200028992 CA5466989 |
101 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA376483705 rs770342995 |
102 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376483681 rs1338361507 |
106 | K>E | No |
ClinGen TOPMed |
|
|
rs748521141 CA5466987 |
107 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA205491212 rs748521141 |
107 | I>V | No |
ClinGen ExAC gnomAD |
|
|
COSM1645683 COSM1645684 rs777048356 CA5466986 COSM465619 |
108 | A>T | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
| TCGA novel | 110 | P>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs766086952 CA5466984 |
110 | P>S | No |
ClinGen ExAC TOPMed |
|
|
rs377601784 CA205491194 |
111 | P>L | No |
ClinGen ESP TOPMed |
|
|
rs1439297364 CA376483642 |
113 | V>L | No |
ClinGen gnomAD |
|
|
rs780182320 CA5466983 |
117 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376483618 rs1436186127 |
117 | P>T | No |
ClinGen Ensembl |
|
|
rs746144639 CA5466982 COSM1217851 |
119 | L>I | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA376483603 rs1343522633 |
119 | L>P | No |
ClinGen TOPMed |
|
|
rs746144639 CA5466981 |
119 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs753645404 CA5466978 |
122 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763747196 CA5466977 |
124 | V>D | No |
ClinGen ExAC gnomAD |
|
|
rs142912222 CA5466975 |
127 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA376483544 rs1588889788 |
128 | E>Q | No |
ClinGen Ensembl |
|
|
CA376483514 rs1461436045 |
132 | A>E | No |
ClinGen gnomAD |
|
|
rs759105775 COSM162994 CA5466973 |
134 | F>L | NS [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1416723101 CA376483486 |
136 | I>M | No |
ClinGen gnomAD |
|
|
rs766101815 CA5466972 |
137 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs150347665 CA5466970 |
137 | R>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs766101815 CA5466971 |
137 | R>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA5466969 rs180868035 RCV000931194 |
140 | I>L | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA376483447 rs1459792917 |
142 | K>R | No |
ClinGen TOPMed |
|
|
rs1250979931 CA376483444 |
143 | R>G | No |
ClinGen gnomAD |
|
|
rs1212825426 CA376483438 |
143 | R>S | No |
ClinGen gnomAD |
|
|
CA376482524 rs1230188430 |
144 | G>D | No |
ClinGen TOPMed |
|
|
rs1337857872 CA376482488 |
146 | E>A | No |
ClinGen TOPMed |
|
|
CA5466950 rs764575518 |
147 | C>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 151 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1401227091 CA376482401 |
151 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
CA5466946 rs527361837 |
154 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs527361837 CA5466947 |
154 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5466948 rs776015472 |
154 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774445478 CA5466945 |
155 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs559961807 CA5466944 CA376482321 |
155 | S>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs774445478 CA376482327 |
155 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA376482304 rs1450276055 |
157 | V>A | No |
ClinGen TOPMed |
|
|
CA5466943 rs749539019 |
157 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA376482293 rs1190789897 |
158 | I>T | No |
ClinGen TOPMed |
|
|
CA5466942 rs777846803 |
159 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777846803 CA376482291 |
159 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138480424 CA5466941 |
159 | K>R | No |
ClinGen ESP ExAC |
|
|
CA205486533 rs912015040 |
161 | P>S | No |
ClinGen TOPMed |
|
|
rs1210497251 CA376482239 |
162 | G>E | No |
ClinGen gnomAD |
|
|
rs760204296 CA5466939 |
162 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA205486521 rs199984109 |
171 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA376482115 rs199984109 |
171 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
CA5466938 rs754991998 |
172 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA5466936 rs779720457 |
176 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466934 VAR_046536 rs7079053 |
179 | V>A | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA205486452 rs386742804 |
179 | V>A | No |
ClinGen Ensembl |
|
|
CA376481989 rs7079053 |
179 | V>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA205486439 rs201526603 |
180 | P>L | No |
ClinGen 1000Genomes TOPMed |
|
|
rs761148975 CA5466932 |
180 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs753081430 CA5466931 |
181 | K>E | No |
ClinGen ExAC TOPMed |
|
|
CA5466930 rs767829083 |
181 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA5466929 rs760040713 |
182 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA376481910 rs1347724696 |
184 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs774782566 CA5466928 |
186 | I>F | No |
ClinGen ExAC gnomAD |
|
|
CA5466927 rs766540692 |
186 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs1173936257 CA376481863 |
188 | E>Q | No |
ClinGen gnomAD |
|
|
rs1415820731 CA376481777 |
193 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs762939897 CA5466926 |
196 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 196 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1486129684 CA376481700 |
199 | N>T | No |
ClinGen gnomAD |
|
| TCGA novel | 200 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1258450460 CA376481689 |
200 | P>T | No |
ClinGen gnomAD |
|
|
rs200265591 CA5466925 |
201 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs941004239 CA205486370 |
202 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1480484289 CA376481674 |
202 | G>R | No |
ClinGen gnomAD |
|
|
CA205486359 rs941004239 |
202 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs769888879 CA5466924 |
203 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA205486353 rs909532212 |
203 | G>R | No |
ClinGen TOPMed gnomAD |
|
| rs752379925 | 204 | M>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA376481638 rs1456188657 |
204 | M>I | No |
ClinGen gnomAD |
|
|
CA5466920 rs148308681 |
207 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs981912877 CA205486309 |
208 | Y>C | No |
ClinGen Ensembl |
|
|
CA5466919 rs746998077 |
208 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs757963789 CA376481547 |
210 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757963789 CA205486272 |
210 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757963789 CA5466917 |
210 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779848424 CA5466918 |
210 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1459872074 CA376481517 |
215 | D>N | No |
ClinGen gnomAD |
|
|
CA376481497 rs1393567589 |
217 | F>L | No |
ClinGen gnomAD |
|
| TCGA novel | 217 | F>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1164308760 CA376481488 |
219 | D>H | No |
ClinGen gnomAD |
|
|
CA5466898 rs778291277 |
220 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA205481616 rs143227333 |
222 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs143227333 CA5466897 |
222 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs752844799 CA5466892 |
224 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466894 rs755377330 |
224 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs777399733 CA5466895 |
224 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1588859740 CA376481186 |
225 | G>R | No |
ClinGen Ensembl |
|
|
rs750880625 CA5466890 |
226 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA5466889 rs201034499 |
226 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs754150577 CA5466887 |
230 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA5466886 rs764387080 |
231 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA376481096 rs1173524331 |
232 | T>S | No |
ClinGen gnomAD |
|
|
rs1032055908 CA205481571 |
234 | G>D | No |
ClinGen TOPMed |
|
|
rs1371787655 CA376481081 |
235 | R>G | No |
ClinGen gnomAD |
|
|
CA376481067 rs866118992 |
237 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA205481567 rs866118992 |
237 | R>Q | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 239 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM917837 CA5466884 rs775178016 |
240 | S>L | endometrium Variant assessed as Somatic; 4.62e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
COSM3397100 CA205481546 COSM3397099 COSM3397101 rs866124059 |
241 | G>D | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA5466881 rs146442068 |
242 | I>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs375021532 CA5466880 |
245 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA376480989 rs1434061744 |
248 | Y>H | No |
ClinGen gnomAD |
|
|
CA5466879 rs748767291 |
249 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs747799575 CA5466877 |
251 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1300083541 CA376480926 |
252 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA5466875 rs780290010 |
252 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA376480895 rs1335290470 |
254 | A>T | No |
ClinGen gnomAD |
|
|
CA376480853 rs1588859403 |
256 | E>G | No |
ClinGen Ensembl |
|
| TCGA novel | 256 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA376480801 rs1473029523 |
260 | A>T | No |
ClinGen TOPMed |
|
|
rs1478416024 CA376480749 |
263 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA376480751 rs1478416024 |
263 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA5466873 rs750955267 |
265 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs779527944 CA376480688 |
266 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
RCV000964200 rs113722704 CA5466871 |
267 | S>N | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs997827161 CA205481450 |
269 | V>I | No |
ClinGen Ensembl |
|
|
CA376480612 rs1212018208 |
271 | E>G | No |
ClinGen gnomAD |
|
| TCGA novel | 272 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA376480602 rs1435819505 |
272 | D>N | No |
ClinGen gnomAD |
|
|
CA205480455 rs1019886408 |
276 | M>V | No |
ClinGen Ensembl |
|
|
CA376480363 rs1319109330 |
280 | G>C | No |
ClinGen Ensembl |
|
|
CA376480355 rs1371435295 |
281 | M>T | No |
ClinGen gnomAD |
|
|
CA376480359 rs1230311035 |
281 | M>V | No |
ClinGen gnomAD |
|
|
CA376480344 rs1309002041 |
282 | E>D | No |
ClinGen gnomAD |
|
| TCGA novel | 282 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 285 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767749031 CA5466848 |
285 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA5466847 rs577020617 |
286 | I>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs751394461 CA5466846 |
287 | H>N | No |
ClinGen ExAC gnomAD |
|
|
rs1350006225 CA376480315 |
287 | H>R | No |
ClinGen gnomAD |
|
|
CA5466845 rs766125758 |
288 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs764772224 CA5466842 |
289 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs773080378 CA205480427 |
289 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773080378 CA5466843 |
289 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1243963204 CA376480294 |
290 | Q>H | No |
ClinGen TOPMed |
|
|
rs761386013 CA5466841 |
291 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs1250882679 CA376480285 |
292 | T>A | No |
ClinGen gnomAD |
|
|
CA205480416 COSM427516 rs1047454308 |
293 | A>V | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA5466840 rs776208797 |
295 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA5466838 rs746578622 |
299 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746578622 CA205480392 |
299 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs985863213 CA205480387 |
301 | W>L | No |
ClinGen TOPMed |
|
|
CA5466837 rs774889924 |
305 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs1174102640 CA376480196 |
305 | R>H | No |
ClinGen TOPMed |
|
|
rs771374851 CA5466836 |
307 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376480187 rs749859903 |
307 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA5466835 rs749859903 |
307 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs771374851 CA376480189 |
307 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs930398633 CA205480379 |
310 | Y>H | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 311 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs778394341 CA5466834 |
311 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs748245414 CA5466832 |
312 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1359535322 CA376480121 |
317 | P>H | No |
ClinGen gnomAD |
|
|
rs779844067 CA5466830 CA376480117 |
318 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376480111 rs1393110479 |
319 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA376480080 rs1427093763 |
323 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs751737800 CA5466829 |
324 | E>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 329 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA376475776 rs1254302895 |
332 | L>V | No |
ClinGen TOPMed |
|
|
rs747418517 COSM917835 CA5466765 |
334 | R>C | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs754511946 CA5466764 |
334 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747418517 CA205453765 |
334 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466762 rs765938650 |
336 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs367928513 CA5466761 |
337 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5466759 rs142121081 |
337 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA5466760 rs142121081 |
337 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA205453696 rs761164757 |
338 | A>S | No |
ClinGen Ensembl |
|
|
rs553769055 COSM917834 CA5466756 |
340 | G>R | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC gnomAD |
|
CA376475719 rs200760101 |
342 | Q>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5466753 rs771071490 |
344 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs773170786 CA5466751 |
345 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376475693 rs1385898695 |
347 | K>E | No |
ClinGen TOPMed |
|
|
CA5466749 rs748142955 |
347 | K>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 349 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1475387169 CA376475675 |
349 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA5466747 rs754598313 |
351 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA376475611 rs1237897247 |
354 | Y>C | No |
ClinGen gnomAD |
|
| TCGA novel | 355 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs571665973 CA5466745 |
355 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5466744 rs374630762 |
357 | T>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs149966206 CA5466743 |
359 | K>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139187411 CA376475509 |
360 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756440174 CA5466741 |
361 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376475500 rs756440174 |
361 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376475425 rs1355895172 |
364 | S>P | No |
ClinGen gnomAD |
|
|
rs1019923273 CA205453624 |
365 | N>D | No |
ClinGen Ensembl |
|
|
CA205453613 rs776033868 |
365 | N>S | No |
ClinGen TOPMed |
|
|
CA5466738 COSM1702248 COSM1702247 COSM1702246 rs370551432 |
366 | G>R | skin [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA205453594 rs911784141 |
368 | D>E | No |
ClinGen TOPMed |
|
| TCGA novel | 369 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA376475307 rs1478923374 |
369 | W>G | No |
ClinGen TOPMed |
|
|
rs199673539 CA5466737 |
370 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5466736 rs766440717 |
371 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs530168426 CA5466735 |
371 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5466734 rs773543182 |
372 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs945004288 CA205453547 |
375 | G>E | No |
ClinGen TOPMed |
|
|
COSM3415000 COSM3415002 rs769749073 CA5466733 COSM3415001 |
376 | N>S | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1413987416 CA376475091 |
377 | K>N | No |
ClinGen gnomAD |
|
|
CA376475071 rs1164817714 |
378 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA376475074 rs1164817714 |
378 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA376475051 rs1379433473 |
379 | V>A | No |
ClinGen gnomAD |
|
|
CA5466732 rs747948664 |
379 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA376473929 rs1196047532 |
382 | Q>P | No |
ClinGen TOPMed |
|
|
rs762065562 CA5466713 |
384 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs776602965 CA5466712 |
385 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA376473908 rs1564396339 |
385 | T>S | No |
ClinGen Ensembl |
|
|
rs775470113 CA5466709 |
388 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376473882 rs771549854 |
389 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs745371202 CA5466707 |
390 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1414962803 CA376473867 |
392 | V>F | No |
ClinGen gnomAD |
|
|
CA376473827 rs1427139883 |
398 | P>L | No |
ClinGen TOPMed |
|
|
CA205450114 rs1048916730 |
398 | P>S | No |
ClinGen Ensembl |
|
|
CA5466704 rs748899944 |
400 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA376473818 rs1476965621 |
400 | I>V | No |
ClinGen gnomAD |
|
|
rs781431241 CA5466703 |
401 | T>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 402 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5466702 rs755346095 |
402 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs199724457 CA205450078 |
404 | V>I | No |
ClinGen Ensembl |
|
|
CA5466701 rs752043800 |
405 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750540463 CA5466698 |
409 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs758460720 CA5466699 |
409 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA205450074 rs866775479 |
412 | E>K | No |
ClinGen Ensembl |
|
|
TCGA novel CA205450067 rs1004627552 |
413 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen TOPMed NCI-TCGA |
|
CA5466695 rs754093395 |
415 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs762153303 CA5466696 |
415 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs369312020 CA5466693 |
416 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
CA376473655 rs1295915647 |
416 | S>P | No |
ClinGen TOPMed |
|
|
rs369312020 CA5466694 |
416 | S>Y | No |
ClinGen ESP ExAC gnomAD |
|
|
rs576366181 CA205450046 |
417 | M>V | No |
ClinGen gnomAD |
|
|
CA376473607 rs1430431200 |
419 | F>L | No |
ClinGen TOPMed |
|
|
CA376473605 rs1430431200 |
419 | F>V | No |
ClinGen TOPMed |
|
|
rs775349899 CA5466692 |
421 | V>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA376473537 COSM1347665 rs1408118336 |
423 | G>S | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1280262067 CA376473509 |
424 | C>* | No |
ClinGen TOPMed |
|
|
rs1178713109 CA376473499 |
425 | K>M | No |
ClinGen TOPMed gnomAD |
|
|
CA5466688 rs770379832 |
426 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs748987885 CA5466687 |
427 | T>R | No |
ClinGen ExAC |
|
|
CA5466673 rs767177302 |
429 | Y>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376472368 rs1164557074 |
430 | P>S | No |
ClinGen gnomAD |
|
|
CA5466672 rs145954532 |
432 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA376472346 rs1441999445 |
433 | G>V | No |
ClinGen TOPMed |
|
|
rs774247461 CA5466671 |
434 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA5466670 rs765913209 |
435 | L>M | No |
ClinGen ExAC |
|
|
CA376472326 rs1157381199 |
436 | G>V | No |
ClinGen TOPMed |
|
|
CA376472320 rs1238266451 |
437 | M>I | No |
ClinGen gnomAD |
|
|
rs772795504 CA5466668 |
437 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA376472309 rs1196962374 |
439 | S>A | No |
ClinGen TOPMed gnomAD |
|
|
CA376472293 rs1487318606 |
442 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
CA376472282 rs1245041209 |
443 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs769495258 CA5466667 |
443 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA5466665 rs775948593 |
447 | I>L | No |
ClinGen ExAC |
|
|
CA5466664 rs199883581 |
448 | T>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA376472238 rs1564388510 |
448 | T>I | No |
ClinGen Ensembl |
|
|
CA5466663 rs375128788 |
453 | G>E | No |
ClinGen ESP ExAC gnomAD |
|
|
rs779560935 CA376472159 |
454 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779560935 CA5466662 |
454 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376472082 rs1302091427 |
458 | M>I | No |
ClinGen gnomAD |
|
|
CA376472089 rs1425527048 |
458 | M>T | No |
ClinGen gnomAD |
|
|
rs529636463 CA5466660 |
458 | M>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs777648377 CA5466659 |
459 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 461 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA376472007 rs1240303141 |
463 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
COSM1217847 CA376472005 rs1246937435 |
463 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA5466658 rs200660300 |
464 | L>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs540725422 CA5466657 |
465 | V>I | No |
ClinGen 1000Genomes ExAC |
|
|
rs767349233 CA5466656 |
466 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1364837534 CA376471948 |
467 | S>R | No |
ClinGen gnomAD |
|
|
rs532348709 CA5466655 |
468 | R>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5466654 rs751563527 |
468 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA205442914 rs1057331807 |
472 | A>S | No |
ClinGen Ensembl |
|
|
CA5466653 rs766287742 |
473 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466651 rs564902260 |
476 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA376471858 rs564902260 |
476 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5466650 rs564902260 COSM1347662 |
476 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA376471852 rs1215544814 |
476 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1230932764 CA376471843 |
477 | P>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA5466648 rs776118668 |
477 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1042934113 CA205442889 |
482 | N>S | No |
ClinGen gnomAD |
|
|
rs759969860 CA5466646 |
484 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA5466645 rs774800046 |
484 | W>C | No |
ClinGen ExAC |
|
|
rs890641054 CA205442856 |
485 | L>P | No |
ClinGen TOPMed |
|
|
rs376390429 CA5466642 |
487 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA205442813 rs771142569 |
487 | I>T | No |
ClinGen Ensembl |
|
|
rs182437025 CA5466643 |
487 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5466641 rs769737936 |
488 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs1190279010 CA376471671 |
489 | L>V | No |
ClinGen TOPMed |
|
|
rs781387948 CA5466639 |
490 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376471660 rs1160845721 |
490 | G>R | No |
ClinGen gnomAD |
|
|
CA376471639 rs1564388155 |
491 | E>G | No |
ClinGen Ensembl |
|
|
rs1376633400 CA376471648 |
491 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs754822166 CA5466638 |
493 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs892763734 CA205442749 |
494 | I>L | No |
ClinGen TOPMed |
|
|
COSM255266 rs749575467 CA5466636 |
495 | V>M | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1447416741 CA376471541 |
497 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1447416741 CA376471544 |
497 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA376471550 rs1192699113 |
497 | G>S | No |
ClinGen gnomAD |
|
|
rs1198715278 CA376471537 |
498 | I>L | No |
ClinGen gnomAD |
|
|
rs758389396 CA5466635 |
499 | I>V | No |
ClinGen ExAC TOPMed |
|
|
rs764845863 CA5466633 |
505 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1564388011 CA376471420 |
506 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA5466631 rs554892989 |
506 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA376471412 rs1276594573 |
507 | E>K | No |
ClinGen gnomAD |
|
|
rs763853549 CA5466630 |
508 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376471373 rs1327457530 |
509 | K>T | No |
ClinGen gnomAD |
|
|
CA5466628 rs774890067 |
511 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376471332 rs1402043333 |
511 | F>L | No |
ClinGen gnomAD |
|
|
CA376471343 rs774890067 |
511 | F>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466627 rs771375002 |
512 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1470644534 CA376471294 |
514 | K>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1169600404 CA376471274 |
517 | I>T | No |
ClinGen gnomAD |
|
|
rs763563755 CA5466626 |
517 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs769982693 CA5466624 |
518 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376471261 rs1475173245 |
519 | Y>F | No |
ClinGen TOPMed |
|
|
rs543390398 CA5466621 |
520 | S>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA376471239 rs1588737721 |
522 | N>S | No |
ClinGen Ensembl |
|
|
rs1205457813 CA376471235 |
523 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
RCV000970713 CA5466619 rs117525057 |
524 | S>L | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA376471157 rs1304164758 |
528 | M>R | No |
ClinGen gnomAD |
|
|
CA376471164 rs1340253141 |
528 | M>V | No |
ClinGen gnomAD |
|
|
CA376471125 rs1272293907 |
530 | M>T | No |
ClinGen gnomAD |
|
|
COSM427514 rs1222857683 CA376471114 |
531 | D>N | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA5466616 rs778706384 |
532 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs371533986 CA5466617 |
532 | D>Y | No |
ClinGen ESP ExAC gnomAD |
|
|
CA376471071 rs367951672 |
533 | S>R | No |
ClinGen ESP TOPMed |
|
|
rs757164139 CA5466615 |
535 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs763657085 CA5466614 |
535 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763657085 CA5466613 |
535 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1330019086 CA376471029 |
537 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA5466612 COSM1646301 rs760427841 COSM1646300 COSM684446 |
537 | A>V | lung Variant assessed as Somatic; 0.0 impact. large_intestine [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 539 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1288766705 CA376469446 |
541 | E>D | No |
ClinGen gnomAD |
|
|
CA376469456 rs1282161805 |
541 | E>K | No |
ClinGen TOPMed |
|
|
CA376469435 rs1203567172 |
542 | G>A | No |
ClinGen gnomAD |
|
|
rs1264457405 CA376469379 |
543 | N>S | No |
ClinGen gnomAD |
|
|
COSM1648688 CA5466553 COSM1648689 COSM538806 rs773082833 |
544 | N>S | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
| TCGA novel | 545 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1306488561 CA376469328 |
546 | Y>D | No |
ClinGen TOPMed gnomAD |
|
|
CA5466552 rs769859201 |
546 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs1306488561 CA376469330 |
546 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
rs201841993 CA5466551 |
548 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs768187031 CA5466549 |
551 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466546 rs757990959 |
552 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466547 rs779745790 |
552 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778076075 CA5466544 |
553 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754210318 CA5466545 |
553 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA5466543 rs756636306 |
554 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs775164675 CA205437454 |
555 | P>L | No |
ClinGen gnomAD |
|
|
rs190763052 CA5466542 |
557 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA376469177 rs190763052 |
557 | L>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5466539 rs143124682 |
559 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA205437389 rs374062923 |
560 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5466536 rs374062923 |
560 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs773172539 CA5466535 |
560 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466534 rs764907882 |
561 | F>* | No |
ClinGen ExAC gnomAD |
|
|
rs376983601 CA5466533 |
561 | F>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs2228637 CA5466532 VAR_046537 |
561 | F>L | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1163132501 CA376469108 |
562 | I>L | No |
ClinGen gnomAD |
|
|
rs1445076308 CA376469074 |
564 | I>F | No |
ClinGen TOPMed |
|
|
rs1384816655 CA376469070 |
564 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs776598307 CA5466531 |
565 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA376469047 rs1389697580 |
566 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA376469029 rs1463719475 |
567 | E>G | No |
ClinGen gnomAD |
|
|
rs746545228 CA5466529 |
567 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA205437268 rs950528977 |
570 | T>S | No |
ClinGen TOPMed |
|
|
rs771747547 CA5466527 |
571 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA205437258 rs771747547 |
571 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466525 rs778160256 |
573 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs569952285 CA5466524 |
574 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376468757 rs61760419 |
580 | L>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 584 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA376468689 rs1457045538 |
584 | E>K | No |
ClinGen TOPMed |
|
|
CA5466518 rs758712396 |
585 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376468667 rs758712396 |
585 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750648742 CA5466517 |
587 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs754732280 CA5466438 |
587 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371858943 CA205475532 |
588 | P>S | No |
ClinGen Ensembl |
|
|
CA205475524 rs568996715 COSM211484 |
590 | A>P | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs568996715 CA376479657 |
590 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA5466437 rs747034072 |
591 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs201038869 CA205475512 |
592 | P>L | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA376479643 rs201038869 |
592 | P>Q | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA376479645 rs1588712985 |
592 | P>S | No |
ClinGen Ensembl |
|
|
rs377066073 CA5466435 |
594 | T>I | No |
ClinGen ESP ExAC gnomAD |
|
|
rs147055093 CA376479619 |
596 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1428559055 CA376479616 |
597 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs141633354 COSM917829 CA205475480 CA5466433 |
597 | G>R | endometrium [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
| TCGA novel | 598 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5466432 rs148041491 |
599 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs554875974 CA5466430 |
600 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA376479598 rs1564376671 |
600 | V>M | No |
ClinGen Ensembl |
|
| TCGA novel | 602 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs890907414 CA5466427 |
603 | C>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1164063912 CA376479566 |
604 | D>V | No |
ClinGen TOPMed |
|
|
CA376479556 rs148913335 |
605 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5466425 rs766803868 |
606 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA376479544 rs1430430503 |
607 | Q>R | No |
ClinGen gnomAD |
|
| TCGA novel | 608 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5466423 rs773185314 |
609 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1485190718 CA376479524 |
610 | C>Y | No |
ClinGen gnomAD |
|
|
CA5466421 rs776830169 |
612 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466420 rs776830169 |
612 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466419 rs768496698 |
613 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs374297417 CA205475410 |
616 | D>G | No |
ClinGen ESP TOPMed |
|
|
CA376479464 rs1183541610 |
618 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA376479468 rs1349348397 |
618 | F>V | No |
ClinGen TOPMed |
|
|
rs746791525 CA5466418 |
619 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs747818891 CA5466375 |
622 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1453286273 CA376478050 |
626 | V>A | No |
ClinGen gnomAD |
|
|
rs750790418 CA5466373 |
626 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750790418 CA5466372 |
626 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376478044 rs1588701670 |
627 | L>R | No |
ClinGen Ensembl |
|
| TCGA novel | 630 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201288994 CA5466371 |
633 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466370 rs757782302 |
634 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs563594298 CA5466369 |
635 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs550087163 CA205471733 |
635 | I>V | No |
ClinGen Ensembl |
|
|
rs145594886 CA5466368 |
636 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA376477981 rs1488877452 |
637 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs752665390 CA5466366 |
641 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs1301385201 CA376477911 |
643 | F>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1447492538 CA376477895 |
645 | T>A | No |
ClinGen gnomAD |
|
|
CA5466295 rs770248476 |
646 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA376477850 rs1379231419 |
651 | E>A | No |
ClinGen TOPMed |
|
|
CA376477820 rs1564367099 |
655 | G>D | No |
ClinGen Ensembl |
|
| TCGA novel | 656 | S>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777065128 CA5466293 |
659 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 660 | F>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1450856854 CA376477789 |
660 | F>I | No |
ClinGen gnomAD |
|
|
CA376477781 rs1367824389 |
661 | C>R | No |
ClinGen TOPMed |
|
|
CA205468094 rs200822773 |
668 | H>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1239008699 CA376477714 |
669 | V>G | No |
ClinGen gnomAD |
|
|
rs529913964 CA5466289 |
669 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA205468086 rs936954579 |
670 | Q>K | No |
ClinGen TOPMed |
|
|
rs1202125848 CA376477709 |
670 | Q>L | No |
ClinGen gnomAD |
|
|
rs1341153445 CA376477706 |
671 | L>F | No |
ClinGen gnomAD |
|
|
CA376477703 rs1422090938 |
671 | L>H | No |
ClinGen gnomAD |
|
|
rs926957972 CA205468081 |
674 | S>N | No |
ClinGen Ensembl |
|
|
CA376477645 rs1230520956 |
679 | K>R | No |
ClinGen gnomAD |
|
|
rs1344416935 CA376477641 |
680 | T>A | No |
ClinGen gnomAD |
|
|
rs779018926 CA5466287 |
680 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376477627 rs1246960150 |
682 | P>H | No |
ClinGen TOPMed |
|
|
CA376477604 rs1298873373 |
685 | D>V | No |
ClinGen Ensembl |
|
|
rs146457862 CA5466260 |
691 | N>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1014613111 CA205464763 |
694 | Y>F | No |
ClinGen TOPMed gnomAD |
|
|
CA5466258 rs374499493 |
695 | S>Y | No |
ClinGen ESP ExAC gnomAD |
|
|
CA205464751 rs775930939 |
698 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA5466255 rs139081795 COSM1702245 |
699 | E>K | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA376477114 rs1456408688 |
700 | N>S | No |
ClinGen gnomAD |
|
|
rs1303790632 CA376477108 |
701 | Q>P | No |
ClinGen TOPMed |
|
|
CA205464749 rs530474285 |
702 | K>N | No |
ClinGen TOPMed |
|
|
CA5466254 rs760041017 |
704 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA376477079 rs1160900157 |
705 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA5466253 rs774346921 |
706 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1376849398 CA376477070 |
707 | R>C | No |
ClinGen gnomAD |
|
|
CA5466251 rs150891261 |
707 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA205464735 rs150891261 |
707 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5466252 rs150891261 |
707 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5466250 rs773413750 |
708 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA376477063 rs1186703492 |
709 | V>G | No |
ClinGen gnomAD |
|
|
CA5466249 CA205464717 rs747937442 |
709 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA5466248 rs747937442 |
709 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1464471836 CA376477053 |
711 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1464471836 CA376477052 |
711 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA5466247 rs780997720 |
713 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs746941565 CA5466245 |
718 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA376477007 rs746941565 |
718 | S>T | No |
ClinGen ExAC gnomAD |
|
|
COSM917825 CA5466244 rs779467840 |
719 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1244672329 CA376476993 |
720 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA205464681 rs1015836785 |
722 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA376476981 rs1015836785 |
722 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1433776872 CA376476970 |
723 | T>N | No |
ClinGen gnomAD |
|
| TCGA novel | 724 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1365277992 CA376476940 |
727 | H>Y | No |
ClinGen gnomAD |
|
|
CA376476925 rs1182856724 |
729 | S>T | No |
ClinGen TOPMed |
|
|
CA5466243 rs757977129 |
731 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376053165 CA5466241 |
732 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs750158069 CA5466242 |
732 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466239 rs2228638 VAR_056957 |
733 | V>I | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA5466238 rs767902777 |
734 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760005002 CA5466237 |
734 | G>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs766507281 CA5466235 |
735 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA205464661 rs944958142 |
741 | R>C | No |
ClinGen TOPMed |
|
|
CA5466233 rs554872876 |
741 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA376476851 rs1433051547 |
742 | Y>H | No |
ClinGen TOPMed |
|
|
rs1027702130 CA205464650 |
746 | E>K | No |
ClinGen Ensembl |
|
|
CA376476808 rs1350476471 |
747 | E>D | No |
ClinGen gnomAD |
|
|
CA5466231 rs566477081 |
749 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA376476798 rs566477081 |
749 | D>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5466230 rs374865894 |
750 | Q>P | No |
ClinGen ESP ExAC gnomAD |
|
|
CA5466228 rs746985525 |
752 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA5466229 rs746985525 |
752 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs780027653 CA5466227 |
754 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA205464587 rs1014030560 |
756 | I>M | No |
ClinGen gnomAD |
|
|
CA5466226 rs772069753 |
756 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466225 rs745403355 |
759 | Q>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 760 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA205464562 rs370641686 |
760 | G>D | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA5466224 rs778519380 |
760 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs924149280 CA205464558 |
767 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA205464554 rs148799934 |
767 | R>H | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs891653165 CA205464550 |
771 | H>R | No |
ClinGen Ensembl |
|
|
CA5466223 rs757021030 |
772 | K>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 773 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5466222 rs753501647 |
774 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA376476610 rs1409925844 |
777 | Y>F | No |
ClinGen gnomAD |
|
|
CA376476614 rs1486897650 |
777 | Y>H | No |
ClinGen gnomAD |
|
|
rs775108406 CA5466210 |
779 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA376476522 rs1235145790 |
783 | G>D | No |
ClinGen gnomAD |
|
|
COSM1217846 rs373328655 CA5466206 |
784 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA gnomAD |
|
rs777499693 CA5466204 |
786 | G>R | Variant assessed as Somatic; 0.0001848 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA5466202 rs148330417 COSM108553 |
788 | G>E | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
| TCGA novel | 790 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5466200 rs550284385 |
791 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5466199 rs370117610 |
791 | G>D | No |
ClinGen ESP ExAC gnomAD |
|
|
CA376476417 rs550284385 |
791 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA376476372 rs1330613852 |
795 | V>M | No |
ClinGen gnomAD |
|
|
CA5466197 rs757346128 |
797 | D>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 797 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA376476306 rs1283585996 |
799 | S>N | No |
ClinGen TOPMed |
|
|
CA376476255 rs1346992017 |
802 | N>K | No |
ClinGen TOPMed |
|
|
rs753801764 CA5466196 |
803 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466195 rs764409827 |
804 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA376476196 rs760760392 |
806 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466193 rs775477172 |
807 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA376476140 rs1477961818 |
810 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 816 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs867510670 CA205462321 |
817 | K>N | No |
ClinGen Ensembl |
|
|
rs764058650 CA5466178 COSM917822 |
818 | K>N | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA376475887 rs1447208247 |
818 | K>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1188820892 CA376475879 |
819 | N>D | No |
ClinGen gnomAD |
|
|
rs1188820892 CA376475878 |
819 | N>Y | No |
ClinGen gnomAD |
|
|
rs1381061538 CA376475869 |
820 | P>L | No |
ClinGen TOPMed |
|
|
CA5466177 rs756401925 |
820 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1235553581 CA376475865 |
821 | E>* | No |
ClinGen gnomAD |
|
|
CA205462303 rs972629078 |
822 | I>L | No |
ClinGen TOPMed |
|
|
CA376475859 rs972629078 |
822 | I>V | No |
ClinGen TOPMed |
|
|
rs201570278 CA5466176 |
824 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5466175 rs767480570 |
825 | D>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 826 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5466174 rs759421479 |
827 | T>R | No |
ClinGen ExAC gnomAD |
|
|
CA205460860 rs373182746 |
828 | G>A | No |
ClinGen Ensembl |
|
|
CA5466151 rs750320738 |
830 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1257885477 CA376475404 |
832 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA376475374 rs150351789 |
834 | E>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs936099600 CA205460857 |
834 | E>D | No |
ClinGen gnomAD |
|
|
CA5466147 RCV000900265 rs150351789 |
834 | E>K | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA376475350 rs1564358248 |
835 | G>D | No |
ClinGen Ensembl |
|
|
rs760298219 CA5466146 COSM1297221 |
836 | E>K | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA5466145 rs774819716 |
838 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA5466144 rs771196307 |
839 | G>C | No |
ClinGen ExAC gnomAD |
|
|
rs771196307 CA376475286 |
839 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA376475268 rs1252527101 |
840 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs540022294 CA5466143 |
840 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1252527101 CA376475266 |
840 | D>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 841 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs940939644 CA205460845 |
843 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA5466141 rs770361179 |
843 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA376475191 rs1221143595 |
844 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs781376715 CA5466139 |
846 | K>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755296281 CA5466138 |
846 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs568761627 CA205460820 |
847 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs774860746 CA5466137 |
848 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200321543 CA205460801 |
849 | N>D | No |
ClinGen 1000Genomes |
|
|
rs1048803 CA5466133 |
855 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA5466132 rs761698307 |
856 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466131 rs144845322 |
857 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1454993218 CA376474977 |
857 | I>V | No |
ClinGen TOPMed |
|
|
rs760388137 CA5466129 |
859 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466128 rs774993945 |
860 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA5466127 rs767142032 |
861 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763234318 CA376474913 |
862 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763234318 CA5466126 |
862 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466123 rs748639459 |
866 | A>D | No |
ClinGen ExAC |
|
|
rs548175518 CA5466124 |
866 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 867 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA376474844 rs1255187775 |
869 | V>I | No |
ClinGen gnomAD |
|
| TCGA novel | 869 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs768849994 CA5466121 |
870 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA376474821 rs1310915221 |
873 | A>T | No |
ClinGen gnomAD |
|
|
CA5466118 rs567261830 |
874 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA376474816 rs567261830 |
874 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs142822518 CA5466117 |
875 | C>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1588673283 CA376474795 |
877 | V>A | No |
ClinGen Ensembl |
|
|
rs778630230 CA5466116 |
877 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376474798 rs778630230 |
877 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5466112 rs566437913 |
878 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5466113 rs200330871 |
878 | V>M | Variant assessed as Somatic; 0.000231 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1239752717 CA376474775 |
881 | C>R | No |
ClinGen TOPMed |
|
|
rs551199073 CA5466111 |
881 | C>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA376474765 rs1377047297 |
882 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
CA5466110 COSM325978 rs767109785 |
883 | C>S | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1454813225 CA376474752 |
884 | W>* | No |
ClinGen gnomAD |
|
|
rs1186925076 CA376474743 |
885 | H>R | No |
ClinGen gnomAD |
|
|
rs1396890390 CA376474745 |
885 | H>Y | No |
ClinGen gnomAD |
|
|
rs532941278 CA205460709 |
886 | N>K | No |
ClinGen 1000Genomes gnomAD |
|
|
rs143988888 CA5466108 |
886 | N>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA376474722 rs1588673153 |
888 | M>I | No |
ClinGen Ensembl |
|
|
CA5466106 rs762474175 |
888 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs1015021561 CA205460692 |
889 | S>P | No |
ClinGen gnomAD |
|
|
rs777261396 CA5466105 |
897 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs887531204 CA205460662 |
898 | N>S | No |
ClinGen Ensembl |
|
|
CA5466104 rs769226149 |
899 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs967172509 CA205460637 |
903 | L>R | No |
ClinGen TOPMed |
|
|
CA376474555 rs1433057157 |
905 | D>G | No |
ClinGen gnomAD |
|
|
CA5466102 rs775598824 |
909 | L>W | No |
ClinGen ExAC gnomAD |
|
|
CA376474467 rs1394130158 |
912 | D>G | No |
ClinGen gnomAD |
|
|
CA5466101 rs772205833 |
914 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs746072156 CA5466100 |
915 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1158664603 CA376474397 COSM917821 |
917 | Q>H | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs778746900 CA5466099 |
918 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs1588672998 CA376474372 |
919 | T>S | No |
ClinGen Ensembl |
|
|
CA376474349 rs1265772039 |
921 | S>* | No |
ClinGen TOPMed |
|
|
rs749026902 CA5466097 |
923 | A>S | No |
ClinGen ExAC TOPMed |
No associated diseases with O14786
6 regional properties for O14786
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Coagulation factor 5/8 C-terminal domain | 274 - 424 | IPR000421-1 |
| domain | Coagulation factor 5/8 C-terminal domain | 430 - 583 | IPR000421-2 |
| domain | CUB domain | 27 - 141 | IPR000859-1 |
| domain | CUB domain | 147 - 265 | IPR000859-2 |
| domain | MAM domain | 645 - 811 | IPR000998 |
| domain | Neuropilin, C-terminal | 845 - 923 | IPR022579 |
16 GO annotations of cellular component
| Name | Definition |
|---|---|
| axon | The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter. |
| cytoplasmic vesicle | A vesicle found in the cytoplasm of a cell. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| early endosome | A membrane-bounded organelle that receives incoming material from primary endocytic vesicles that have been generated by clathrin-dependent and clathrin-independent endocytosis; vesicles fuse with the early endosome to deliver cargo for sorting into recycling or degradation pathways. |
| extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
| focal adhesion | A cell-substrate junction that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments. In insects focal adhesion has also been referred to as hemi-adherens junction (HAJ). |
| glutamatergic synapse | A synapse that uses glutamate as a neurotransmitter. |
| integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| integral component of postsynaptic membrane | The component of the postsynaptic membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| mitochondrial membrane | Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope. |
| neurofilament | A type of intermediate filament found in the core of neuronal axons. Neurofilaments are heteropolymers composed of three type IV polypeptides: NF-L, NF-M, and NF-H (for low, middle, and high molecular weight). Neurofilaments are responsible for the radial growth of an axon and determine axonal diameter. |
| neuron projection | A prolongation or process extending from a nerve cell, e.g. an axon or dendrite. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| receptor complex | Any protein complex that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function. |
| semaphorin receptor complex | A stable binary complex of a neurophilin and a plexin, together forming a functional semaphorin receptor. |
| sorting endosome | A multivesicular body surrounded by and connected with multiple tubular compartments with associated vesicles. |
11 GO annotations of molecular function
| Name | Definition |
|---|---|
| coreceptor activity | Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity. |
| cytokine binding | Binding to a cytokine, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity. |
| growth factor binding | Binding to a growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate. |
| GTPase activator activity | Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP. |
| heparin binding | Binding to heparin, a member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues. |
| metal ion binding | Binding to a metal ion. |
| protein kinase binding | Binding to a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate. |
| semaphorin receptor activity | Combining with a semaphorin, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. |
| signaling receptor activity | Receiving a signal and transmitting it in the cell to initiate a change in cell activity. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response. |
| vascular endothelial growth factor binding | Binding to a vascular endothelial growth factor. |
| vascular endothelial growth factor receptor activity | Combining with a vascular endothelial growth factor (VEGF) receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity. |
89 GO annotations of biological process
| Name | Definition |
|---|---|
| actin cytoskeleton reorganization | A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of constituent parts of cytoskeletal structures comprising actin filaments and their associated proteins. |
| angiogenesis | Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels. |
| angiogenesis involved in coronary vascular morphogenesis | Blood vessel formation in the heart when new vessels emerge from the proliferation of pre-existing blood vessels. |
| animal organ morphogenesis | Morphogenesis of an animal organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. |
| artery morphogenesis | The process in which the anatomical structures of arterial blood vessels are generated and organized. Arteries are blood vessels that transport blood from the heart to the body and its organs. |
| axon extension involved in axon guidance | The long distance growth of a single cell process, that is involved in the migration of an axon growth cone, where the migration is directed to a specific target site by a combination of attractive and repulsive cues. |
| axon guidance | The chemotaxis process that directs the migration of an axon growth cone to a specific target site in response to a combination of attractive and repulsive cues. |
| axonal fasciculation | The collection of axons into a bundle of rods, known as a fascicle. |
| axonogenesis involved in innervation | The neurite development process that generates a long process of a neuron, as it invades a target tissue. |
| basal dendrite arborization | The process in which the anatomical structures of a dendritic tree are generated on the basal neuron side and organized into dendritic branches. |
| basal dendrite development | The process whose specific outcome is the progression of a basal dendrite over time, from its formation to the mature structure. |
| branching involved in blood vessel morphogenesis | The process of coordinated growth and sprouting of blood vessels giving rise to the organized vascular system. |
| branchiomotor neuron axon guidance | The process in which a branchiomotor neuron growth cone is directed to a specific target site. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx. |
| cell migration involved in sprouting angiogenesis | The orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels involved in sprouting angiogenesis. |
| cell-cell signaling | Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions. |
| cellular response to hepatocyte growth factor stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hepatocyte growth factor stimulus. |
| cellular response to vascular endothelial growth factor stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vascular endothelial growth factor stimulus. |
| commissural neuron axon guidance | The process in which the migration of an axon growth cone of a commissural neuron is directed to its target in the brain in response to a combination of attractive and repulsive cues. |
| coronary artery morphogenesis | The process in which the anatomical structures of coronary arteries are generated and organized. Coronary arteries are blood vessels that transport blood to the heart muscle. |
| dichotomous subdivision of terminal units involved in salivary gland branching | The process in which a salivary epithelial cord bifurcates at its end. |
| dorsal root ganglion morphogenesis | The developmental process by which a dorsal root ganglion is generated and organized. |
| endothelial cell chemotaxis | The directed movement of an endothelial cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis). |
| endothelial cell migration | The orderly movement of an endothelial cell into the extracellular matrix to form an endothelium. |
| endothelial tip cell fate specification | The process involved in the specification of identity of an endothelial tip cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. An endothelial tip cell is a specialized endothelial cell localized to the leading edge of an angiogenic sprout that senses extracellular signals and guides the directed growth of blood vessels. |
| facial nerve structural organization | The process that contributes to the act of creating the structural organization of the facial nerve. This process pertains to the physical shaping of a rudimentary structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial opthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities. |
| facioacoustic ganglion development | The process whose specific outcome is the progression of an acoustico-facial VII-VIII ganglion complex over time, from its formation to the mature structure. |
| gonadotrophin-releasing hormone neuronal migration to the hypothalamus | The directional movement of a gonadotrophin-releasing hormone producing neuron from the nasal placode to the hypothalamus. |
| hepatocyte growth factor receptor signaling pathway | The series of molecular signals initiated by a ligand binding to a hepatocyte growth factor receptor, and ending with the regulation of a downstream cellular process, e.g. transcription. |
| integrin-mediated signaling pathway | The series of molecular signals initiated by an extracellular ligand binding to an integrin on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. |
| motor neuron migration | The orderly movement of a motor neuron from one site to another. A motor neuron is an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement. |
| negative regulation of axon extension involved in axon guidance | Any process that stops, prevents, or reduces the frequency, rate or extent of axon extension involved in axon guidance. |
| negative regulation of extrinsic apoptotic signaling pathway | Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway. |
| negative regulation of neuron apoptotic process | Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in neurons. |
| nerve development | The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure. |
| neural crest cell migration | The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo. |
| neural crest cell migration involved in autonomic nervous system development | Any neural crest cell migration that is involved in autonomic nervous system development. |
| neuron migration | The characteristic movement of an immature neuron from germinal zones to specific positions where they will reside as they mature. |
| neuropilin signaling pathway | The series of molecular signals initiated by an extracellular ligand binding to a neuropilin protein on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. |
| otic placode development | The process whose specific outcome is the progression of an otic placode over time, from its formation to the mature structure. |
| outflow tract septum morphogenesis | The process in which the anatomical structures of the outflow tract septum are generated and organized. The outflow tract septum is a partition in the outflow tract. |
| platelet-derived growth factor receptor signaling pathway | The series of molecular signals initiated by a ligand binding to a platelet-derived growth factor receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. |
| positive chemotaxis | The directed movement of a motile cell or organism towards a higher concentration of a chemical. |
| positive regulation of actin cytoskeleton reorganization | Any process that activates or increases the frequency, rate or extent of actin cytoskeleton reorganization. |
| positive regulation of angiogenesis | Any process that activates or increases angiogenesis. |
| positive regulation of axon extension involved in axon guidance | Any process that activates, maintains or increases the frequency, rate or extent of axon extension involved in axon guidance. |
| positive regulation of cell migration involved in sprouting angiogenesis | Any process that increases the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis. |
| positive regulation of cytokine activity | Any process that increases the rate, frequency or extent of the activity of a molecule that controls the survival, growth, differentiation and effector function of tissues and cells. |
| positive regulation of endothelial cell migration | Any process that increases the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium. |
| positive regulation of endothelial cell proliferation | Any process that activates or increases the rate or extent of endothelial cell proliferation. |
| positive regulation of ERK1 and ERK2 cascade | Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade. |
| positive regulation of filopodium assembly | Any process that activates or increases the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone. |
| positive regulation of focal adhesion assembly | Any process that activates or increases the frequency, rate or extent of focal adhesion assembly, the establishment and maturation of focal adhesions. |
| positive regulation of peptidyl-tyrosine phosphorylation | Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine. |
| positive regulation of phosphorylation | Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule. |
| positive regulation of retinal ganglion cell axon guidance | Any process that activates or increases the frequency, rate or extent of retinal ganglion cell axon guidance. |
| positive regulation of smooth muscle cell migration | Any process that activates, maintains or increases the frequency, rate or extent of smooth muscle cell migration. |
| positive regulation of stress fiber assembly | Any process that activates or increases the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts. |
| positive regulation of substrate adhesion-dependent cell spreading | Any process that activates or increases the frequency, rate or extent of substrate adhesion-dependent cell spreading. |
| postsynapse organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a postsynapse. |
| protein localization to early endosome | A process in which a protein is transported to, or maintained in, a location within an early endosome. |
| regulation of Cdc42 protein signal transduction | Any process that modulates the frequency, rate or extent of Cdc42 protein signal transduction. |
| regulation of retinal ganglion cell axon guidance | Any process that modulates the frequency, rate, or extent of retinal ganglion cell axon guidance, the process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues. |
| regulation of vascular endothelial growth factor receptor signaling pathway | Any process that modulates the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity. |
| regulation of vesicle-mediated transport | Any process that modulates the rate, frequency, or extent of vesicle-mediated transport, the directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell. |
| renal artery morphogenesis | The process in which the anatomical structure of a renal artery is generated and organized. Renal arteries supply the kidneys with blood. |
| response to wounding | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism. |
| retina vasculature morphogenesis in camera-type eye | The process in which the vasculature of the retina is generated and organized. |
| retinal ganglion cell axon guidance | The process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues. |
| semaphorin-plexin signaling pathway | The series of molecular signals generated as a consequence of a semaphorin receptor (composed of a plexin and a neurophilin) binding to a semaphorin ligand. |
| semaphorin-plexin signaling pathway involved in axon guidance | Any semaphorin-plexin signaling pathway that is involved in axon guidance. |
| semaphorin-plexin signaling pathway involved in neuron projection guidance | Any semaphorin-plexin signaling pathway that is involved in neuron projection guidance. |
| sensory neuron axon guidance | The process in which the migration of an axon growth cone of a sensory neuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A sensory neuron is an afferent neuron conveying sensory impulses. |
| signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
| sprouting angiogenesis | The extension of new blood vessels from existing vessels into avascular tissues, this process includes the specialization of endothelial cells into leading tip and stalk cells, proliferation and migration of the endothelial cells and cell adhesion resulting in angiogenic sprout fusion or lumen formation. |
| substrate adhesion-dependent cell spreading | The morphogenetic process that results in flattening of a cell as a consequence of its adhesion to a substrate. |
| substrate-dependent cell migration, cell extension | The formation of a cell surface protrusion, such as a lamellipodium or filopodium, at the leading edge of a migrating cell. |
| sympathetic ganglion development | The process whose specific outcome is the progression of a sympathetic ganglion over time, from its formation to the mature structure. |
| sympathetic neuron projection extension | Long distance growth of a single sympathetic neuron projection involved in cellular development. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite. |
| sympathetic neuron projection guidance | The process in which the migration of a sympathetic neuron projection is directed to a specific target site in response to a combination of attractive and repulsive cues. |
| toxin transport | The directed movement of a toxin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| trigeminal ganglion development | The process whose specific outcome is the progression of a trigeminal ganglion over time, from its formation to the mature structure. |
| trigeminal nerve structural organization | The process that contributes to the act of creating the structural organization of the oculomotor nerve. This process pertains to the physical shaping of a rudimentary structure. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae. |
| vascular endothelial growth factor receptor signaling pathway | The series of molecular signals initiated by a ligand binding to a vascular endothelial growth factor receptor (VEGFR) on the surface of the target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. |
| vasculogenesis | The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes. |
| VEGF-activated neuropilin signaling pathway | The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a neuropilin protein on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. |
| VEGF-activated neuropilin signaling pathway involved in axon guidance | Any VEGF-activated neuropilin signaling pathway that is involved in axon guidance. |
| ventral trunk neural crest cell migration | The movement of trunk neural crest cells from the neural tube, travelling ventrally through the anterior half of each sclerotome. Trunk neural crest cells that remain in the sclerotome form the dorsal root ganglia containing the sensory neurons. Trunk neural crest cells that continue more ventrally form the sympathetic ganglia, the adrenal medulla, and the nerve clusters surrounding the aorta. |
| vestibulocochlear nerve structural organization | The process that contributes to the act of creating the structural organization of the vestibulocochlear nerve. This process pertains to the physical shaping of a rudimentary structure. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea. |
| viral entry into host cell | The process that occurs after viral attachment by which a virus, or viral nucleic acid, breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the viral nucleic acid is released into the host cell cytoplasm. |
6 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P79795 | NRP1 | Neuropilin-1 | Gallus gallus (Chicken) | PR |
| O60462 | NRP2 | Neuropilin-2 | Homo sapiens (Human) | PR |
| Q96PD2 | DCBLD2 | Discoidin, CUB and LCCL domain-containing protein 2 | Homo sapiens (Human) | PR |
| P97333 | Nrp1 | Neuropilin-1 | Mus musculus (Mouse) | PR |
| Q9QWJ9 | Nrp1 | Neuropilin-1 | Rattus norvegicus (Rat) | PR |
| Q8QFX6 | nrp1a | Neuropilin-1a | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MERGLPLLCA | VLALVLAPAG | AFRNDKCGDT | IKIESPGYLT | SPGYPHSYHP | SEKCEWLIQA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PDPYQRIMIN | FNPHFDLEDR | DCKYDYVEVF | DGENENGHFR | GKFCGKIAPP | PVVSSGPFLF |
| 130 | 140 | 150 | 160 | 170 | 180 |
| IKFVSDYETH | GAGFSIRYEI | FKRGPECSQN | YTTPSGVIKS | PGFPEKYPNS | LECTYIVFVP |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KMSEIILEFE | SFDLEPDSNP | PGGMFCRYDR | LEIWDGFPDV | GPHIGRYCGQ | KTPGRIRSSS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| GILSMVFYTD | SAIAKEGFSA | NYSVLQSSVS | EDFKCMEALG | MESGEIHSDQ | ITASSQYSTN |
| 310 | 320 | 330 | 340 | 350 | 360 |
| WSAERSRLNY | PENGWTPGED | SYREWIQVDL | GLLRFVTAVG | TQGAISKETK | KKYYVKTYKI |
| 370 | 380 | 390 | 400 | 410 | 420 |
| DVSSNGEDWI | TIKEGNKPVL | FQGNTNPTDV | VVAVFPKPLI | TRFVRIKPAT | WETGISMRFE |
| 430 | 440 | 450 | 460 | 470 | 480 |
| VYGCKITDYP | CSGMLGMVSG | LISDSQITSS | NQGDRNWMPE | NIRLVTSRSG | WALPPAPHSY |
| 490 | 500 | 510 | 520 | 530 | 540 |
| INEWLQIDLG | EEKIVRGIII | QGGKHRENKV | FMRKFKIGYS | NNGSDWKMIM | DDSKRKAKSF |
| 550 | 560 | 570 | 580 | 590 | 600 |
| EGNNNYDTPE | LRTFPALSTR | FIRIYPERAT | HGGLGLRMEL | LGCEVEAPTA | GPTTPNGNLV |
| 610 | 620 | 630 | 640 | 650 | 660 |
| DECDDDQANC | HSGTGDDFQL | TGGTTVLATE | KPTVIDSTIQ | SEFPTYGFNC | EFGWGSHKTF |
| 670 | 680 | 690 | 700 | 710 | 720 |
| CHWEHDNHVQ | LKWSVLTSKT | GPIQDHTGDG | NFIYSQADEN | QKGKVARLVS | PVVYSQNSAH |
| 730 | 740 | 750 | 760 | 770 | 780 |
| CMTFWYHMSG | SHVGTLRVKL | RYQKPEEYDQ | LVWMAIGHQG | DHWKEGRVLL | HKSLKLYQVI |
| 790 | 800 | 810 | 820 | 830 | 840 |
| FEGEIGKGNL | GGIAVDDISI | NNHISQEDCA | KPADLDKKNP | EIKIDETGST | PGYEGEGEGD |
| 850 | 860 | 870 | 880 | 890 | 900 |
| KNISRKPGNV | LKTLDPILIT | IIAMSALGVL | LGAVCGVVLY | CACWHNGMSE | RNLSALENYN |
| 910 | 920 | ||||
| FELVDGVKLK | KDKLNTQSTY | SEA |