B9DG24
Gene name |
TAF7 (At1g55300, F7A10.3) |
Protein name |
Transcription initiation factor TFIID subunit 7 |
Names |
TBP-associated factor 7, AtTAF7 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT1G55300 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for B9DG24
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-B9DG24-F1 | Predicted | AlphaFoldDB |
20 variants for B9DG24
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH13579295 | 28 | S>C | No | 1000Genomes | |
| ENSVATH14321644 | 32 | P>L | No | 1000Genomes | |
| ENSVATH01372838 | 34 | D>N | No | 1000Genomes | |
| ENSVATH04967906 | 36 | F>C | No | 1000Genomes | |
| ENSVATH04967904 | 38 | S>* | No | 1000Genomes | |
| ENSVATH04967905 | 38 | S>P | No | 1000Genomes | |
| tmp_1_20629000_C_A | 39 | E>D | No | 1000Genomes | |
| ENSVATH13579271 | 45 | T>K | No | 1000Genomes | |
| ENSVATH04967900 | 47 | M>I | No | 1000Genomes | |
| ENSVATH01372836 | 148 | F>L | No | 1000Genomes | |
| ENSVATH13579269 | 162 | L>I | No | 1000Genomes | |
| ENSVATH01372835 | 166 | N>K | No | 1000Genomes | |
| tmp_1_20628371_A_C | 168 | I>S | No | 1000Genomes | |
| ENSVATH04967892 | 173 | F>L | No | 1000Genomes | |
| tmp_1_20628310_C_A | 188 | M>I | No | 1000Genomes | |
| ENSVATH00098482 | 221 | N>S | No | 1000Genomes | |
| ENSVATH04967891 | 232 | I>N | No | 1000Genomes | |
| ENSVATH04967890 | 233 | Q>R | No | 1000Genomes | |
| tmp_1_20628161_A_T | 238 | I>N | No | 1000Genomes | |
| ENSVATH01372834 | 239 | I>T | No | 1000Genomes |
No associated diseases with B9DG24
1 regional properties for B9DG24
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | TAFII55 protein, conserved region | 1 - 147 | IPR006751 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| transcription factor TFIID complex | A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| RNA polymerase II preinitiation complex assembly | The aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEEQFILRVP | PSVSERIDRL | LSEDASTSDE | IPLDLFFSED | GRNGTFMIGN | DEFPASLLDL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PAVVESFKTY | DDCALVKTAD | IGQMIMVREP | GDPAPNTVEY | RHGLTPPMKD | ARKRRFRREP |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DLNPELVQRV | ERDLLNILSG | GTVENVSFSF | YFRHMMCLYL | LLGFSNFIYL | NFFWCRYMSK |
| 190 | 200 | 210 | 220 | 230 | |
| RNQLRTRMLV | MQVRKYLLLH | LHLLKSLKLL | RQALVIQQEL | NRREVNQKIL | MIQCEFIII |