A2PYH4
Gene name |
HFM1 (SEC3D1) |
Protein name |
Probable ATP-dependent DNA helicase HFM1 |
Names |
SEC63 domain-containing protein 1 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:164045 |
EC number |
3.6.4.12: Acting on ATP; involved in cellular and subcellular movement |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for A2PYH4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-A2PYH4-F1 | Predicted | AlphaFoldDB |
1112 variants for A2PYH4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs730880018 RCV000114368 CA151142 |
562 | R>S | Premature ovarian failure 9 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs751622198 RCV001290508 |
635 | Y>* | Premature ovarian failure 9 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs587777269 RCV000114370 CA151145 VAR_071262 |
736 | G>S | Premature ovarian failure 9 POF9 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
VAR_071263 RCV000114369 rs587777268 CA151143 |
884 | I>S | Premature ovarian failure 9 POF9 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
rs587777270 RCV000114371 |
1310 | P>missing | Premature ovarian failure 9 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1557742504 RCV000680219 |
1354 | P>missing | Premature ovarian failure 9 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs72952916 CA946603 RCV000897701 |
2 | L>P | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA946604 rs753618370 |
2 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA946602 rs376463557 |
4 | S>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs902217652 CA26643265 |
5 | N>D | No |
ClinGen TOPMed |
|
|
rs750039664 CA946600 |
8 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs570086889 CA946599 |
19 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1382373708 CA341067251 |
20 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA946598 rs761296537 |
20 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA946597 rs773897910 |
21 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341067236 rs1458269903 |
21 | E>K | No |
ClinGen TOPMed |
|
|
CA946595 rs763484118 |
23 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341066847 rs1263457034 |
25 | H>R | No |
ClinGen gnomAD |
|
|
CA341066849 rs1478481729 |
25 | H>Y | No |
ClinGen gnomAD |
|
|
CA341066839 rs1489711805 |
26 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs780008884 CA946584 |
26 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341066834 rs1267044825 |
27 | D>G | No |
ClinGen gnomAD |
|
|
CA26640379 rs908265078 |
28 | N>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 29 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341066814 rs1306879921 |
30 | K>E | No |
ClinGen gnomAD |
|
|
rs755906039 CA946583 |
31 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA946582 rs370744197 |
32 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA946580 rs761502634 |
33 | D>A | No |
ClinGen ExAC gnomAD |
|
|
CA341066796 rs767335606 |
33 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946581 rs767335606 |
33 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA26640358 rs141417240 |
34 | W>* | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA341066785 rs1309068461 |
34 | W>L | No |
ClinGen TOPMed |
|
|
CA946579 rs751069678 |
36 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341066773 rs751069678 |
36 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946578 rs763617079 |
37 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1320618745 CA341066764 |
38 | P>A | No |
ClinGen TOPMed |
|
|
rs1320618745 CA341066762 |
38 | P>S | No |
ClinGen TOPMed |
|
|
CA341066751 rs199964473 |
40 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA946576 rs199964473 |
40 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA341066742 rs1423785839 |
41 | L>F | No |
ClinGen gnomAD |
|
|
rs1031532459 CA26640335 |
42 | I>V | No |
ClinGen Ensembl |
|
|
CA946575 rs770144973 |
46 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs759954839 CA946574 |
49 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs747217886 CA946571 |
52 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA946572 rs373281770 |
52 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs1200526793 CA341066666 |
53 | E>K | No |
ClinGen gnomAD |
|
|
CA946570 rs773189326 |
54 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1259395164 CA341066648 |
55 | L>S | No |
ClinGen TOPMed |
|
|
CA341066640 rs1222953517 |
56 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA946568 rs749242897 |
61 | L>* | No |
ClinGen ExAC gnomAD |
|
|
CA341066600 rs1373139198 |
62 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1260654562 CA341066577 |
63 | Q>R | No |
ClinGen TOPMed |
|
|
CA26638865 rs772181134 |
64 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946552 rs772181134 |
64 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341066557 rs1444049830 |
66 | R>K | No |
ClinGen gnomAD |
|
|
CA341066550 rs1200806185 |
67 | P>S | No |
ClinGen TOPMed |
|
| TCGA novel | 68 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA26638844 CA26638857 CA341066532 rs76064907 |
69 | M>I | No |
ClinGen gnomAD |
|
|
CA946551 rs572935716 |
73 | N>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA341066492 rs1219264049 |
75 | K>N | No |
ClinGen gnomAD |
|
|
rs1571231474 CA341066494 |
75 | K>R | No |
ClinGen Ensembl |
|
|
CA946550 rs774550781 |
76 | I>V | No |
ClinGen ExAC |
|
|
CA341066480 rs1354784152 |
77 | T>S | No |
ClinGen gnomAD |
|
|
rs200426118 CA946548 |
79 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 81 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA946546 rs757016511 |
81 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs942004452 CA26638780 |
82 | N>T | No |
ClinGen TOPMed |
|
|
CA341066441 rs1312863543 |
83 | Y>H | No |
ClinGen gnomAD |
|
|
CA341066424 rs1289495738 |
85 | S>* | No |
ClinGen TOPMed |
|
|
rs1162983887 CA341066427 |
85 | S>T | No |
ClinGen gnomAD |
|
|
rs1358261485 CA341066409 |
88 | Q>* | No |
ClinGen gnomAD |
|
|
CA26638779 rs971286400 |
88 | Q>R | No |
ClinGen gnomAD |
|
|
CA946545 rs148999016 |
89 | K>N | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 89 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA946544 rs201897123 |
91 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341066346 rs1380735173 |
93 | A>G | No |
ClinGen TOPMed |
|
|
CA341066325 rs1161415166 |
95 | P>H | No |
ClinGen TOPMed gnomAD |
|
|
rs757969232 CA946543 |
96 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA26638750 rs369145569 |
97 | D>G | No |
ClinGen Ensembl |
|
|
rs752247488 CA946542 |
99 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755505134 CA26638736 |
102 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764688741 CA341066255 |
102 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755505134 CA946540 |
102 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764688741 CA946541 |
102 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754286331 CA946538 |
103 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs539997150 CA946537 |
103 | D>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1359099249 CA341066198 |
107 | E>G | No |
ClinGen gnomAD |
|
|
CA341066184 rs1253430146 |
108 | G>V | No |
ClinGen TOPMed |
|
|
CA946536 rs761169095 |
108 | G>W | No |
ClinGen ExAC gnomAD |
|
|
rs369055444 CA946533 |
109 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs767828285 CA341066182 |
109 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767828285 CA946534 |
109 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1016362604 CA26638684 |
110 | G>D | No |
ClinGen gnomAD |
|
|
CA341066140 rs1321370124 |
113 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA946530 rs759556646 |
115 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs11165778 VAR_039799 CA946531 |
115 | S>P | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs34569892 CA946529 |
116 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
VAR_039800 CA946528 rs282009 |
117 | I>V | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs746876084 CA946527 |
118 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1195894033 CA341066083 |
118 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs375745788 CA946526 |
119 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA341066051 rs771745554 |
122 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341066048 rs1392420198 |
122 | T>K | No |
ClinGen TOPMed |
|
|
rs771745554 CA946525 |
122 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946524 rs772496665 |
123 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1231788467 CA341066040 |
123 | Y>D | No |
ClinGen gnomAD |
|
|
CA341066014 rs1234775397 |
125 | S>F | No |
ClinGen TOPMed |
|
|
CA946523 rs372556136 |
126 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA946521 rs753284346 |
128 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs756555959 CA946519 |
132 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341065901 rs1331525965 |
135 | E>* | No |
ClinGen gnomAD |
|
|
CA946518 rs750839829 |
135 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA341065886 rs1480928374 |
136 | I>T | No |
ClinGen TOPMed |
|
|
rs1571230611 CA341065891 |
136 | I>V | No |
ClinGen Ensembl |
|
|
CA341065880 rs1444523525 |
137 | A>T | No |
ClinGen gnomAD |
|
|
rs767731233 CA946517 |
138 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs762147234 CA946516 |
139 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1179092464 CA341065849 |
140 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1249935146 CA341065834 |
141 | S>N | No |
ClinGen TOPMed |
|
|
CA946515 rs751770130 |
143 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA946514 rs764270793 |
144 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA26638579 rs900992140 |
145 | D>H | No |
ClinGen Ensembl |
|
|
rs775415478 CA946512 |
147 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA341065710 rs1181511413 |
152 | A>S | No |
ClinGen gnomAD |
|
|
rs770945159 CA946511 |
155 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760493845 CA946510 |
157 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs760493845 CA341065651 |
157 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA341065634 rs1040920656 |
158 | S>I | No |
ClinGen gnomAD |
|
|
CA26638529 rs1040920656 |
158 | S>T | No |
ClinGen gnomAD |
|
|
rs202217676 CA946506 |
163 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs771800488 CA946507 |
163 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1221376362 CA341065556 |
165 | R>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1359970876 CA341064938 |
169 | I>M | No |
ClinGen gnomAD |
|
|
rs1212210127 CA341064946 |
169 | I>V | No |
ClinGen TOPMed |
|
|
rs761655076 CA946485 |
172 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs897634028 CA341064899 |
173 | I>L | No |
ClinGen TOPMed gnomAD |
|
|
rs897634028 CA26632327 |
173 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA26632310 rs1000525728 |
174 | H>N | No |
ClinGen Ensembl |
|
|
rs369539453 CA946484 |
174 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA946483 rs577158315 |
175 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1412196444 CA341064867 |
176 | S>N | No |
ClinGen gnomAD |
|
|
CA341064865 rs1183124986 |
176 | S>R | No |
ClinGen gnomAD |
|
|
CA341064843 rs1472800706 |
180 | N>D | No |
ClinGen gnomAD |
|
|
rs1191131774 CA341064839 |
180 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA946482 rs147184441 |
180 | N>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1377029528 CA341064837 |
181 | D>N | No |
ClinGen TOPMed |
|
|
CA341064824 rs1489051593 |
182 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1286538832 CA341064806 |
185 | D>N | No |
ClinGen gnomAD |
|
|
CA341064796 rs1221400995 |
186 | S>A | No |
ClinGen gnomAD |
|
|
CA946481 rs775085469 |
186 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 187 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs769127365 CA946480 |
187 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA946479 rs746387661 |
189 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946477 rs757823691 |
193 | I>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs778245594 CA946475 |
194 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1299213476 CA341064711 |
195 | Q>* | No |
ClinGen gnomAD |
|
|
rs1299213476 CA341064708 |
195 | Q>E | No |
ClinGen gnomAD |
|
|
rs758671967 CA946473 |
198 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946472 TCGA novel rs752808375 |
199 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen ExAC gnomAD |
|
CA26632246 rs902796010 |
201 | G>E | No |
ClinGen Ensembl |
|
|
CA946471 rs148469632 |
202 | K>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1167895264 CA341064587 |
205 | N>S | No |
ClinGen gnomAD |
|
|
CA946470 rs138827341 |
206 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA341064573 rs138827341 |
206 | Y>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs753901043 CA946469 |
207 | S>G | No |
ClinGen ExAC |
|
|
CA341064561 rs1156242942 |
207 | S>N | No |
ClinGen gnomAD |
|
|
CA946468 rs543936384 |
208 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA946467 rs761708520 |
209 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA341064535 rs774161459 |
209 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774161459 CA946466 |
209 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs282026 CA341064505 CA341064504 |
211 | Q>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs762679463 CA946464 |
212 | K>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 213 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1317192021 CA341064469 |
214 | Q>R | No |
ClinGen gnomAD |
|
|
rs1440221803 CA341064456 |
215 | Y>C | No |
ClinGen TOPMed |
|
|
CA341064443 rs1257559538 |
216 | S>Y | No |
ClinGen gnomAD |
|
|
rs1217262607 COSM1748659 CA341064426 |
218 | N>D | urinary_tract [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs557206287 CA341064415 |
219 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs557206287 CA946463 |
219 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA341064384 rs1386575432 |
221 | T>I | No |
ClinGen gnomAD |
|
|
CA341064352 rs1186271596 |
224 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs745422945 CA946461 |
227 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946460 rs776256514 |
228 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs771602063 CA946459 |
228 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1466674836 CA341064297 |
230 | E>V | No |
ClinGen gnomAD |
|
|
rs201459797 CA946456 |
232 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA946455 rs143418583 |
234 | G>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1431091259 CA341064256 |
234 | G>S | No |
ClinGen gnomAD |
|
|
rs143418583 CA946454 COSM1179142 |
234 | G>V | prostate [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA946451 rs574702514 |
235 | M>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs753960613 CA946452 |
235 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA341064220 rs1265020616 |
238 | A>V | No |
ClinGen gnomAD |
|
|
rs1196832546 CA341064216 |
239 | P>S | No |
ClinGen gnomAD |
|
|
CA946450 rs757206132 |
241 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs751440788 CA946449 |
241 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA341064192 rs1434730840 |
243 | V>F | No |
ClinGen TOPMed |
|
|
CA946447 rs762720520 |
244 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341064184 rs1303895098 |
244 | A>V | No |
ClinGen gnomAD |
|
|
CA341064179 rs1234362261 |
245 | F>L | No |
ClinGen TOPMed |
|
|
rs972596862 CA26632014 |
246 | Q>H | No |
ClinGen gnomAD |
|
| TCGA novel | 247 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs147781194 CA26632001 |
247 | P>L | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs759229697 CA946444 |
247 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341064140 rs1220949310 |
248 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1449636597 CA341064132 |
249 | D>G | No |
ClinGen gnomAD |
|
|
rs1449636597 CA341064131 |
249 | D>V | No |
ClinGen gnomAD |
|
|
CA946443 rs372526987 |
250 | I>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372526987 CA26631994 |
250 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA946425 rs758329770 |
253 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs752473029 CA946424 |
254 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA341064027 rs1342647530 |
255 | E>A | No |
ClinGen gnomAD |
|
|
rs142034233 CA946422 |
257 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA946423 rs142034233 |
257 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1339805383 CA341063993 |
258 | L>F | No |
ClinGen TOPMed |
|
|
rs753477544 CA946421 |
258 | L>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs890289872 CA26631482 |
259 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA946420 rs766128752 |
259 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946418 rs149920604 |
261 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1329020659 CA341063962 |
262 | K>Q | No |
ClinGen Ensembl |
|
|
CA946417 rs772757563 |
263 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772757563 CA341063948 |
263 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341063907 rs1219183272 |
267 | I>V | No |
ClinGen gnomAD |
|
| rs755797245 | 268 | P>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs146051438 COSM198331 CA946401 |
268 | P>L | Variant assessed as Somatic; 0.0 impact. large_intestine prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs146051438 CA946402 |
268 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA946416 rs199692136 |
268 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA946399 COSM465082 rs749935008 |
269 | A>T | kidney central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA946398 rs774773495 |
273 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1315690085 CA341063410 |
273 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA946397 rs762238830 |
274 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1227691657 CA341063380 |
277 | E>G | No |
ClinGen gnomAD |
|
|
CA26628384 rs983887227 |
279 | P>R | No |
ClinGen TOPMed |
|
|
CA341063368 rs1321304189 |
279 | P>T | No |
ClinGen gnomAD |
|
|
rs764580625 CA946395 |
281 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1395066615 CA341063344 |
282 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA26628375 rs918431097 |
283 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs918431097 CA26628376 |
283 | Y>F | No |
ClinGen TOPMed gnomAD |
|
|
CA341063338 rs1326699118 |
283 | Y>H | No |
ClinGen gnomAD |
|
|
CA341063330 rs1421776011 |
284 | I>T | No |
ClinGen gnomAD |
|
|
rs1274088349 CA341063334 |
284 | I>V | No |
ClinGen TOPMed |
|
|
rs775806818 CA946393 |
285 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA26628372 rs763131998 |
285 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1475860158 CA341063324 |
285 | Q>R | No |
ClinGen gnomAD |
|
|
CA341063317 rs1197169918 |
286 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs916132525 CA26628371 |
288 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA341063302 rs770040067 |
289 | F>I | No |
ClinGen ExAC gnomAD |
|
|
CA946392 rs770040067 |
289 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs577843338 CA946391 |
290 | D>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA341063259 rs1201974149 |
293 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA341063254 rs1335432953 |
294 | Y>S | No |
ClinGen gnomAD |
|
|
CA946372 rs776981718 |
295 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946371 rs771048982 |
296 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 296 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341063240 rs771048982 |
296 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 296 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341063237 rs111276867 |
297 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA946369 rs111276867 |
297 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA26627757 rs563207010 |
298 | N>D | No |
ClinGen Ensembl |
|
|
rs1442966516 CA341063200 |
302 | C>Y | No |
ClinGen gnomAD |
|
|
COSM1290247 CA946366 rs768745926 |
303 | A>T | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs749189973 CA946365 |
303 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150267573 CA946363 |
305 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA946362 rs745644977 |
306 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341063166 rs1410751713 |
308 | G>E | No |
ClinGen gnomAD |
|
|
CA341063162 rs1177280282 |
309 | K>E | No |
ClinGen gnomAD |
|
| rs1472143975 | 310 | T>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 313 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341063113 rs1262263301 |
316 | A>G | No |
ClinGen gnomAD |
|
|
rs751116446 CA946359 |
317 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341063110 rs751116446 |
317 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1355803440 CA341063103 |
318 | T>A | No |
ClinGen gnomAD |
|
|
CA341063101 rs1284782632 |
318 | T>K | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 321 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341063060 rs1355818245 |
324 | V>I | No |
ClinGen gnomAD |
|
|
CA341063046 rs1298005320 |
326 | L>S | No |
ClinGen gnomAD |
|
|
CA341063029 rs1423513235 |
328 | W>* | No |
ClinGen TOPMed |
|
|
CA341063033 rs1256944211 |
328 | W>G | No |
ClinGen TOPMed |
|
|
CA341063008 rs1347479234 |
331 | I>N | No |
ClinGen gnomAD |
|
|
rs1398469030 CA341063010 |
331 | I>V | No |
ClinGen gnomAD |
|
|
rs1165412285 CA341062531 |
336 | M>I | No |
ClinGen TOPMed |
|
|
CA26626803 rs867217224 |
336 | M>T | No |
ClinGen Ensembl |
|
|
rs1289784845 CA341062514 |
337 | A>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 339 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777276467 CA946338 |
339 | I>V | No |
ClinGen ExAC TOPMed |
|
|
rs1436457116 CA341062480 |
340 | K>N | No |
ClinGen gnomAD |
|
|
rs752193921 CA946336 |
344 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755412600 CA946334 |
345 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs755412600 CA946335 |
345 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs754261870 CA946333 |
346 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946332 rs766605643 |
346 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1420028971 CA341062390 |
348 | D>E | No |
ClinGen gnomAD |
|
|
rs760966045 CA946331 |
348 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs937887671 CA26626770 |
350 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
CA341062373 rs1190366677 |
350 | W>G | No |
ClinGen gnomAD |
|
|
CA341062348 rs1215652059 |
351 | K>N | No |
ClinGen gnomAD |
|
|
CA946330 rs750608014 |
351 | K>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 352 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341062335 rs1333934810 |
352 | E>D | No |
ClinGen TOPMed |
|
|
rs1330656019 CA341062308 |
354 | F>L | No |
ClinGen Ensembl |
|
|
rs1259934537 CA341062294 |
356 | P>S | No |
ClinGen TOPMed |
|
|
CA341062284 rs1202742432 |
357 | I>V | No |
ClinGen gnomAD |
|
|
rs572956753 CA946328 |
358 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs769810640 CA946326 |
360 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA26626705 rs370337662 |
365 | T>I | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1442282594 CA341062205 |
365 | T>S | No |
ClinGen gnomAD |
|
|
CA341062185 rs1328663915 |
368 | T>A | No |
ClinGen gnomAD |
|
|
rs776504049 CA946324 |
368 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 372 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1034067557 CA26626675 |
378 | H>R | No |
ClinGen TOPMed |
|
| TCGA novel | 380 | H>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 381 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs919365504 CA26626659 |
381 | I>S | No |
ClinGen TOPMed |
|
|
CA946319 rs771694233 |
382 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs367974780 CA946320 |
382 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA341062066 rs1175506656 |
385 | T>A | No |
ClinGen gnomAD |
|
|
rs747699966 CA946318 |
385 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1557492132 CA341062061 |
386 | P>A | No |
ClinGen Ensembl |
|
|
rs1259429312 CA341062042 |
387 | E>* | No |
ClinGen gnomAD |
|
|
CA26626332 rs952598926 |
387 | E>V | No |
ClinGen Ensembl |
|
|
CA26626329 rs1002472538 |
390 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA341062010 rs1187031326 |
391 | S>N | No |
ClinGen TOPMed |
|
|
rs1242922949 CA341062007 |
391 | S>R | No |
ClinGen gnomAD |
|
|
rs766328593 CA946303 |
392 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA26626320 rs1025372227 |
392 | M>V | No |
ClinGen gnomAD |
|
|
CA946302 rs760514872 |
393 | T>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 394 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 396 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1478785929 CA341061977 |
396 | W>R | No |
ClinGen TOPMed |
|
|
CA946301 rs772963726 |
397 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs773926336 CA26626308 |
399 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs143523339 CA946299 |
399 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA26626296 rs777481519 |
402 | V>I | No |
ClinGen Ensembl |
|
|
CA341061924 rs1454241262 |
403 | Q>H | No |
ClinGen gnomAD |
|
|
CA946296 rs767985205 |
404 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA946294 rs780481996 |
406 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946295 rs780481996 |
406 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341061912 rs1326929130 |
406 | R>P | No |
ClinGen TOPMed |
|
|
CA341061913 rs1326929130 |
406 | R>Q | No |
ClinGen TOPMed |
|
|
rs781654966 CA946291 |
411 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA341061872 rs1207453954 |
412 | E>G | No |
ClinGen gnomAD |
|
|
rs1427431281 CA341061855 |
413 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA946268 rs752752940 |
414 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946267 rs778916154 |
416 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 417 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs756063767 CA946266 |
421 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA946265 rs375023366 |
421 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs767441300 CA946264 |
423 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs761574317 CA946263 |
424 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946262 rs751345139 |
424 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA26626003 rs761574317 |
424 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 425 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1490261609 CA341061765 |
427 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs763690308 CA946261 |
427 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs762622286 CA946260 |
429 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341061756 rs1267172485 |
429 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA946259 rs535478134 |
430 | S>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA26625931 rs896445171 |
432 | M>T | No |
ClinGen Ensembl |
|
|
rs115101410 RCV000891367 CA946258 |
432 | M>V | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1196008410 CA341061699 |
437 | S>C | No |
ClinGen gnomAD |
|
|
CA341061694 rs1277889842 |
438 | V>A | No |
ClinGen gnomAD |
|
|
rs371806710 CA341061676 |
441 | T>A | No |
ClinGen gnomAD |
|
|
rs371806710 CA26625884 |
441 | T>S | No |
ClinGen gnomAD |
|
|
rs1260658152 CA341061674 |
441 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1214363543 CA341061665 |
443 | K>E | No |
ClinGen gnomAD |
|
|
CA341061661 rs1467976705 |
443 | K>R | No |
ClinGen TOPMed |
|
|
rs1193156415 CA341061642 |
446 | S>G | No |
ClinGen TOPMed |
|
|
rs960385276 CA26625865 |
447 | T>A | No |
ClinGen TOPMed |
|
|
rs1441478306 CA341061621 |
449 | I>T | No |
ClinGen gnomAD |
|
|
CA946254 rs771548951 |
449 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1265332877 CA341061615 |
450 | P>L | No |
ClinGen TOPMed |
|
|
rs778161077 CA946252 |
451 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs200987612 CA946253 |
451 | M>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA946251 rs201810434 |
452 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748343941 CA946250 |
452 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA946247 rs753904839 |
456 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs983941730 CA341061582 |
456 | V>I | No |
ClinGen gnomAD |
|
|
rs983941730 CA26625817 |
456 | V>L | No |
ClinGen gnomAD |
|
|
rs781159012 CA946246 |
459 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA341061531 rs1167544910 |
464 | E>A | No |
ClinGen TOPMed |
|
|
rs1212700549 CA341061527 |
464 | E>D | No |
ClinGen gnomAD |
|
|
rs1255168224 CA341061533 |
464 | E>K | No |
ClinGen gnomAD |
|
|
CA26625808 rs763896199 |
465 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946243 rs763896199 |
465 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746902726 CA946225 |
469 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs1267252353 CA341060982 |
469 | W>R | No |
ClinGen TOPMed |
|
|
rs1460412631 CA341060949 |
474 | E>K | No |
ClinGen gnomAD |
|
|
rs758280394 CA946223 |
476 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA946222 rs752525842 |
479 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752525842 CA26624489 |
479 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1455252695 CA341060885 |
483 | D>G | No |
ClinGen TOPMed |
|
|
rs765029033 CA946221 |
483 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA341060880 COSM536740 rs1557484453 |
484 | E>K | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
| TCGA novel | 485 | S>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs371771069 CA26624482 |
487 | R>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA341060850 rs1431103308 |
488 | P>Q | No |
ClinGen Ensembl |
|
|
CA946219 rs754639287 |
488 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA946218 rs753422559 |
491 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs765858659 CA946217 |
492 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs1212977371 CA341060824 |
492 | Q>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1212977371 CA341060823 |
492 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs113908392 CA946216 |
493 | K>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1571166569 TCGA novel CA341060811 |
494 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Ensembl |
| TCGA novel | 500 | C>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA946214 rs767901171 |
502 | S>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 503 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341060672 rs1321115533 |
503 | N>S | No |
ClinGen TOPMed |
|
| TCGA novel | 504 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 505 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA946212 rs774669891 |
508 | K>M | No |
ClinGen ExAC gnomAD |
|
|
CA341060590 rs774669891 |
508 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs768895516 CA946211 |
511 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs184300837 CA946210 |
512 | T>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA341060518 rs1353519834 |
513 | L>V | No |
ClinGen gnomAD |
|
| TCGA novel | 514 | N>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341060502 rs1168079156 |
514 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs974125890 CA26624435 |
517 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA26624406 rs745931048 |
518 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs745931048 CA946207 |
518 | A>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 520 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777822859 CA946206 |
522 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs921966538 CA26624402 |
523 | M>I | No |
ClinGen Ensembl |
|
|
rs374326885 CA946204 |
524 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs754692279 CA946202 |
526 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA946203 rs778803357 |
526 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1202675073 CA341060304 |
527 | Q>R | No |
ClinGen gnomAD |
|
|
rs571940865 CA946200 |
530 | T>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1557483909 CA341060247 |
531 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| TCGA novel | 534 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1294646423 CA341060141 |
535 | A>T | No |
ClinGen gnomAD |
|
|
CA341060084 rs1397747709 |
539 | G>D | No |
ClinGen TOPMed |
|
|
CA341060090 rs1348600114 |
539 | G>S | No |
ClinGen TOPMed |
|
|
rs202230352 CA946181 |
546 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341059963 rs1313476457 |
548 | V>L | No |
ClinGen gnomAD |
|
|
rs1244074553 CA341059929 |
550 | D>V | No |
ClinGen TOPMed |
|
|
rs183853995 RCV000886984 CA946180 |
551 | A>S | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA946178 rs757772139 |
552 | K>I | No |
ClinGen ExAC gnomAD |
|
|
rs1344571281 CA341059892 |
552 | K>N | No |
ClinGen TOPMed |
|
|
rs1003287440 CA26624095 |
554 | I>V | No |
ClinGen Ensembl |
|
|
rs751993272 CA946177 |
555 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946176 rs764580542 |
559 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1337413539 CA341059787 |
560 | K>Q | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 561 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341059761 rs1469361874 |
561 | Q>R | No |
ClinGen gnomAD |
|
|
CA946160 rs756823711 |
564 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 565 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs751054694 CA946159 |
566 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs1188790836 CA341056569 |
567 | A>T | No |
ClinGen gnomAD |
|
|
CA341056561 rs1465007223 |
567 | A>V | No |
ClinGen gnomAD |
|
|
rs758869391 CA946157 |
570 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341056528 rs1336425355 |
571 | R>G | No |
ClinGen gnomAD |
|
|
rs765464144 CA946155 |
573 | S>* | No |
ClinGen ExAC gnomAD |
|
|
CA946156 rs765464144 |
573 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA341056420 rs1324538140 |
578 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA946137 rs748538937 |
578 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA26648840 rs375973310 |
579 | L>* | No |
ClinGen ESP |
|
|
CA341056387 rs1391005527 |
581 | D>G | No |
ClinGen gnomAD |
|
|
CA341056390 rs1224994192 |
581 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs749600291 CA26648839 |
582 | G>V | No |
ClinGen gnomAD |
|
|
CA341056367 rs1170817099 |
583 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 585 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341056334 rs1430983322 |
586 | H>Q | No |
ClinGen gnomAD |
|
|
CA946136 rs779471164 |
587 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1171213451 CA341056313 |
588 | A>G | No |
ClinGen gnomAD |
|
|
CA341056306 rs1571066773 |
589 | G>C | No |
ClinGen Ensembl |
|
|
CA946134 rs754212850 |
589 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA946135 rs754212850 |
589 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA946133 rs766752052 |
590 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341056284 rs1180708378 |
591 | E>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 593 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA946131 rs750556786 |
594 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1012439211 CA26648790 |
598 | V>L | No |
ClinGen Ensembl |
|
|
rs1186364060 CA341055808 |
600 | G>R | No |
ClinGen TOPMed |
|
|
rs1260087410 CA341055800 |
600 | G>V | No |
ClinGen TOPMed |
|
|
CA946128 rs201052208 |
603 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA946129 rs201052208 |
603 | T>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA26648782 rs200124442 |
608 | P>A | No |
ClinGen Ensembl |
|
|
rs765204069 CA946127 |
608 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946106 rs760459754 |
612 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs772907560 CA946105 |
614 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1433442609 CA341055633 |
615 | T>A | No |
ClinGen TOPMed |
|
|
CA341055613 rs1271299010 |
617 | A>T | No |
ClinGen TOPMed |
|
|
CA946102 rs773875461 |
618 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs761273830 CA946103 |
618 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs376597094 CA946100 |
621 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 622 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA946098 rs770346807 |
623 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs867642174 CA26648571 |
623 | P>S | No |
ClinGen Ensembl |
|
|
CA26648544 rs757896742 |
624 | A>S | No |
ClinGen Ensembl |
|
|
rs781314917 CA946096 |
625 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781314917 CA341055532 |
625 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1209622397 CA341055510 |
627 | V>A | No |
ClinGen gnomAD |
|
|
rs1323773987 CA341055499 |
629 | I>V | No |
ClinGen TOPMed |
|
|
CA341055466 rs1202678875 |
632 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1260653411 CA341055463 |
632 | T>R | No |
ClinGen TOPMed |
|
|
rs991048969 CA26648532 |
633 | M>I | No |
ClinGen Ensembl |
|
| TCGA novel | 633 | M>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341055458 rs1334392586 |
633 | M>V | No |
ClinGen gnomAD |
|
|
CA341055441 rs1271666539 |
634 | H>R | No |
ClinGen gnomAD |
|
|
rs959574424 CA26648526 |
635 | Y>F | No |
ClinGen Ensembl |
|
|
CA946093 rs777857782 |
636 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777857782 CA341055423 |
636 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341055374 rs1429205574 |
641 | E>K | No |
ClinGen gnomAD |
|
|
rs754921202 CA946092 |
642 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs200108256 CA946091 |
643 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1439742058 CA341055297 |
647 | D>H | No |
ClinGen gnomAD |
|
|
rs1439742058 CA341055294 |
647 | D>N | No |
ClinGen gnomAD |
|
|
CA26648495 rs796915736 |
647 | D>V | No |
ClinGen TOPMed |
|
|
CA946090 rs750382272 |
648 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946089 rs750382272 |
648 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341055284 rs1429787898 |
648 | I>V | No |
ClinGen TOPMed |
|
| TCGA novel | 649 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA946088 rs750188552 |
650 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs767111482 CA946087 |
654 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761482068 CA946086 |
656 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA946085 rs773751926 |
656 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA341055198 rs1443376631 |
657 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1443376631 CA341055199 |
657 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs768148277 CA946084 |
657 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA946083 rs762544027 |
659 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA946082 rs776193091 |
659 | Q>P | No |
ClinGen ExAC |
|
|
CA26648049 rs767764848 |
661 | D>V | No |
ClinGen Ensembl |
|
|
rs750210407 CA946066 |
662 | T>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 662 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1183396289 CA341055088 |
663 | T>I | No |
ClinGen gnomAD |
|
|
CA341055073 rs1232691472 |
665 | T>S | No |
ClinGen gnomAD |
|
|
CA946064 rs368136550 |
668 | I>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs767289102 CA946065 |
668 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA946062 rs372108143 |
669 | M>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1446118367 CA341055020 |
670 | T>I | No |
ClinGen TOPMed |
|
|
rs1302736891 CA341055018 |
671 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA341055017 rs762598590 |
671 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762598590 CA946061 |
671 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA341055007 rs1372076695 |
672 | L>* | No |
ClinGen gnomAD |
|
|
CA341054992 rs1277569171 |
673 | S>I | No |
ClinGen gnomAD |
|
|
CA946060 rs775106667 |
674 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs765875887 CA946059 |
675 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs368428379 CA26648004 |
677 | K>E | No |
ClinGen ESP TOPMed |
|
|
CA341054944 rs1357525798 |
678 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA946057 rs776872414 |
679 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1407452619 CA341054910 |
683 | A>T | No |
ClinGen gnomAD |
|
|
CA946055 rs374636425 |
684 | C>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA26647991 rs774725943 |
687 | T>P | No |
ClinGen Ensembl |
|
|
CA26647989 rs950959772 |
687 | T>S | No |
ClinGen Ensembl |
|
| rs1252951333 | 690 | S>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs373788141 CA946041 |
692 | L>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA946040 rs759964404 |
693 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201222024 CA946038 |
695 | H>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA341054817 rs1210239683 |
695 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs761142943 CA946037 |
697 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1242258064 CA341054798 |
698 | E>* | No |
ClinGen gnomAD |
|
| TCGA novel | 701 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341054761 rs1313430666 |
703 | E>* | No |
ClinGen gnomAD |
|
|
CA946036 rs773410728 |
703 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1364608992 CA341054750 |
704 | I>M | No |
ClinGen gnomAD |
|
|
rs772307411 CA946035 |
707 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA341054724 rs1164463218 |
709 | I>V | No |
ClinGen gnomAD |
|
|
rs80085795 CA26647612 |
710 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
CA946034 rs748313759 |
710 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA341054710 rs1477914924 |
711 | D>G | No |
ClinGen TOPMed |
|
|
CA946033 rs774423067 |
713 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA341054691 rs1245704703 |
714 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
CA341054692 rs1245704703 |
714 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA341054681 rs1571056971 |
715 | A>V | No |
ClinGen Ensembl |
|
|
CA341054675 rs1189866937 |
716 | V>G | No |
ClinGen gnomAD |
|
|
rs200863694 CA946031 |
720 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200863694 CA341054650 |
720 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200189845 CA26647601 |
720 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA946030 rs781235178 |
725 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770740284 CA946029 |
727 | R>* | No |
ClinGen ExAC gnomAD |
|
|
CA946028 rs746849418 |
727 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA946027 rs546156770 |
728 | A>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs546156770 CA946026 |
728 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 728 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 728 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs949283466 CA26647588 |
730 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA26647586 rs1055141893 |
734 | H>R | No |
ClinGen TOPMed |
|
|
CA946025 rs190125328 |
734 | H>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA341054555 rs1366016209 |
735 | Y>* | No |
ClinGen gnomAD |
|
|
CA341054540 rs866322472 |
736 | G>D | No |
ClinGen gnomAD |
|
|
CA26646034 rs866322472 |
736 | G>V | No |
ClinGen gnomAD |
|
|
rs1174074758 CA341054525 |
738 | A>V | No |
ClinGen TOPMed |
|
|
CA341054517 rs1225544201 |
740 | G>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1465751778 CA341054501 |
742 | N>S | No |
ClinGen TOPMed |
|
|
CA341054481 rs1430932398 |
745 | G>R | No |
ClinGen gnomAD |
|
|
CA341054445 rs1400901273 |
750 | L>V | No |
ClinGen gnomAD |
|
|
rs756651903 CA946001 |
751 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs751000156 CA946000 |
751 | Q>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| rs1392616713 | 753 | L>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341054379 rs748828981 |
757 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945984 rs748828981 |
757 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945983 rs779755805 |
758 | L>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 760 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341054344 rs1327294793 |
762 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1485238597 CA341054330 |
765 | D>Y | No |
ClinGen TOPMed |
|
|
rs781690914 CA945980 |
766 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341054312 rs1340572704 |
767 | I>M | No |
ClinGen gnomAD |
|
|
rs1450788148 CA341054317 |
767 | I>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 768 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA945978 rs751940190 |
769 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs758649359 CA341054292 |
770 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000503810 CA945977 rs143399622 |
770 | D>N | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs758649359 CA945976 |
770 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341054283 rs1446395217 |
771 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA945975 rs369106562 |
772 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA26644511 rs550108983 |
772 | G>S | No |
ClinGen Ensembl |
|
|
CA26644498 rs866122639 |
774 | N>K | No |
ClinGen Ensembl |
|
|
CA945973 rs759737721 |
775 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341054256 rs1296434498 |
776 | K>Q | No |
ClinGen TOPMed |
|
|
rs1347527660 CA341054253 |
776 | K>R | No |
ClinGen TOPMed |
|
|
rs1473058663 CA341054245 |
777 | P>R | No |
ClinGen gnomAD |
|
|
CA341054242 rs1557881102 |
778 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA341054238 rs1406081854 |
778 | T>I | No |
ClinGen TOPMed |
|
|
rs1461822231 CA341052328 |
780 | A>T | No |
ClinGen gnomAD |
|
|
CA341052300 rs1317327398 |
782 | R>I | No |
ClinGen TOPMed |
|
|
CA945943 rs776121467 |
784 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs199795312 CA26632358 |
785 | A>G | No |
ClinGen Ensembl |
|
|
CA945942 rs531270537 |
785 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA945941 rs202216683 |
786 | W>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1570954529 CA341052234 |
787 | Y>D | No |
ClinGen Ensembl |
|
| TCGA novel | 787 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1349674398 CA341052208 |
788 | Y>C | No |
ClinGen gnomAD |
|
|
CA945940 rs778191362 |
790 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778191362 CA341052175 |
790 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945939 rs772600370 |
792 | E>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA945937 rs146519128 |
794 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs971893384 CA26632304 |
797 | F>I | No |
ClinGen Ensembl |
|
|
rs754183196 CA945935 |
798 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341051988 rs1470399324 |
800 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
COSM536744 CA341051963 rs1411733775 |
801 | S>N | lung Variant assessed as Somatic; 4.623e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs377560856 CA945932 |
802 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1413771185 CA341051936 |
803 | K>E | No |
ClinGen TOPMed |
|
|
CA945931 rs763964671 |
804 | E>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 807 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs752444592 CA945929 |
807 | S>P | No |
ClinGen ExAC TOPMed |
|
|
CA945928 rs764942528 |
808 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA341051829 rs1238652632 |
809 | L>P | No |
ClinGen gnomAD |
|
|
rs1210169642 CA341051294 |
811 | T>I | No |
ClinGen gnomAD |
|
| TCGA novel | 812 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341051242 rs1264582986 |
816 | C>S | No |
ClinGen gnomAD |
|
|
CA945911 rs199920073 |
817 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA945912 rs199920073 |
817 | K>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA341051216 rs1323367104 |
818 | E>G | No |
ClinGen gnomAD |
|
|
rs781272018 CA945910 |
820 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA341051183 rs1246882830 |
821 | D>A | No |
ClinGen gnomAD |
|
|
rs758269920 COSM1748656 CA945909 |
822 | I>M | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs566465324 CA26631244 |
822 | I>T | No |
ClinGen Ensembl |
|
|
CA945908 rs752695113 |
823 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs1384113337 CA341051112 |
828 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
COSM913179 rs200685742 CA945907 |
829 | K>N | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs967527015 CA26631219 |
830 | K>R | No |
ClinGen TOPMed |
|
|
CA945906 rs753599200 |
831 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs753599200 CA945905 |
831 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs766050562 CA945904 |
832 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs994404901 CA26631188 |
835 | L>S | No |
ClinGen TOPMed |
|
|
CA945903 rs377354571 |
836 | N>K | No |
ClinGen ESP ExAC gnomAD |
|
|
CA945902 rs772603368 |
837 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA945900 rs761218679 |
838 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA341050973 rs1162936513 |
840 | N>S | No |
ClinGen TOPMed |
|
|
CA945898 rs769258836 |
841 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA945899 rs775049733 COSM1344850 |
841 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1329229559 CA341050950 |
843 | T>P | No |
ClinGen TOPMed gnomAD |
|
|
CA341050941 rs200915273 |
844 | I>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA341050936 rs1334366526 |
844 | I>N | No |
ClinGen TOPMed |
|
|
CA945897 rs200915273 |
844 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1481993376 CA341050856 |
848 | M>I | No |
ClinGen gnomAD |
|
|
CA341050860 rs1181395242 |
848 | M>K | No |
ClinGen gnomAD |
|
|
rs1269307059 CA341050863 |
848 | M>V | No |
ClinGen gnomAD |
|
|
CA26631054 rs867718171 |
849 | E>* | No |
ClinGen Ensembl |
|
|
CA341050809 rs1188444018 |
852 | I>S | No |
ClinGen TOPMed |
|
|
rs1272587797 CA341050796 |
853 | K>R | No |
ClinGen gnomAD |
|
|
rs202028945 CA945883 |
855 | R>K | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1197688983 CA341050758 |
855 | R>S | No |
ClinGen gnomAD |
|
|
CA945881 rs766131744 |
859 | V>G | No |
ClinGen ExAC |
|
|
rs182873590 CA945882 |
859 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA341050659 rs1255667614 |
860 | N>T | No |
ClinGen gnomAD |
|
|
rs1327529208 CA341049706 |
863 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs763588773 CA26628225 |
863 | I>V | No |
ClinGen Ensembl |
|
|
rs1391353631 CA341049695 |
864 | Q>* | No |
ClinGen TOPMed |
|
|
rs747123527 CA945863 |
865 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA945862 rs777781068 |
866 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA341049644 rs1339388917 |
867 | L>I | No |
ClinGen gnomAD |
|
|
rs1557842330 CA341049617 |
868 | G>A | No |
ClinGen Ensembl |
|
|
rs1342611530 CA341049605 |
869 | C>G | No |
ClinGen TOPMed |
|
|
CA341049553 rs148748547 |
872 | I>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1454257848 COSM1296787 CA341049535 |
872 | I>M | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA945861 rs148748547 |
872 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs749289510 CA945860 |
873 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA945859 rs779840431 |
875 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1030101602 CA26628163 |
877 | L>F | No |
ClinGen TOPMed |
|
|
rs976430829 CA341049429 |
878 | T>P | No |
ClinGen TOPMed |
|
|
CA26628159 rs976430829 |
878 | T>S | No |
ClinGen TOPMed |
|
|
CA341049382 rs1279763713 |
880 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA945857 rs369341064 |
881 | T>N | Variant assessed as Somatic; 0.0001386 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs377522857 CA945855 COSM198319 |
882 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA945854 rs763634505 |
885 | F>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341049232 rs1244050922 |
887 | H>R | No |
ClinGen gnomAD |
|
|
rs753307675 CA945852 |
890 | R>* | No |
ClinGen ExAC gnomAD |
|
|
CA945851 rs765642526 |
890 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
rs1286723011 CA341049178 |
891 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA341049041 rs1288397011 |
894 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1288397011 CA341049036 |
894 | W>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1356184373 CA341049119 |
894 | W>R | No |
ClinGen gnomAD |
|
|
rs1359556434 CA341049021 |
895 | L>F | No |
ClinGen gnomAD |
|
|
rs1451141223 CA341049009 |
897 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA945834 rs777557586 |
898 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA945833 rs777557586 |
898 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1225730965 CA341048972 |
899 | V>E | No |
ClinGen gnomAD |
|
|
CA945831 rs752119436 |
901 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759913049 CA945829 |
902 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs759913049 CA945830 |
902 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA945828 rs754243616 |
903 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA945827 rs766795535 |
903 | E>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 905 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA945826 rs761013477 |
906 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA26627818 rs1055206084 |
908 | V>L | No |
ClinGen TOPMed |
|
|
rs773471071 CA945825 |
909 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs772248526 CA945824 |
911 | N>I | No |
ClinGen ExAC gnomAD |
|
|
rs761908956 CA945823 |
913 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341048807 rs1379816268 |
914 | I>V | No |
ClinGen TOPMed |
|
|
rs774242792 CA945822 |
917 | K>R | No |
ClinGen ExAC gnomAD |
|
|
COSM198318 CA945821 rs778554439 |
918 | C>* | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed |
|
CA26627735 rs1024277076 |
918 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs745730719 CA945819 |
920 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs941670598 CA26627706 |
920 | R>S | No |
ClinGen TOPMed |
|
|
rs745730719 CA945820 |
920 | R>T | No |
ClinGen ExAC gnomAD |
|
|
rs1437790398 CA740229689 |
921 | C>* | No |
ClinGen TOPMed |
|
|
rs1202260649 CA341048724 |
921 | C>Y | No |
ClinGen gnomAD |
|
|
CA341048649 rs1490636287 |
928 | L>M | No |
ClinGen gnomAD |
|
|
rs781188345 CA945818 |
932 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1201894430 CA341048603 |
933 | Q>K | No |
ClinGen gnomAD |
|
|
rs899351590 CA26627683 |
935 | E>G | No |
ClinGen Ensembl |
|
|
CA341048583 rs1212228886 |
935 | E>K | No |
ClinGen TOPMed |
|
|
CA26627671 rs1015088198 |
937 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA945795 rs11584478 VAR_049338 |
939 | I>V | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs371246671 CA945794 |
940 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs147392516 RCV000500123 CA26625292 |
940 | T>I | No |
ClinGen ClinVar 1000Genomes ESP TOPMed dbSNP gnomAD |
|
|
rs778614772 CA945793 |
942 | S>* | No |
ClinGen ExAC gnomAD |
|
|
CA341047890 rs74843031 |
945 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM913174 CA945791 rs368172224 |
946 | V>I | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA945790 rs780568804 |
947 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1470531811 CA341047854 |
947 | N>S | No |
ClinGen gnomAD |
|
|
CA945789 rs756562539 |
949 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA341047800 rs1421361599 |
950 | L>F | No |
ClinGen gnomAD |
|
|
CA341047746 rs1441332739 |
954 | K>* | No |
ClinGen TOPMed |
|
|
CA341047730 rs1408078656 |
954 | K>R | No |
ClinGen gnomAD |
|
| rs1180713834 | 956 | I>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341047684 rs1442228664 |
956 | I>M | No |
ClinGen gnomAD |
|
|
rs1207485155 CA341047691 |
956 | I>T | No |
ClinGen TOPMed |
|
|
CA945788 rs750796433 |
957 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA945787 rs767798908 |
960 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945786 rs757640828 COSM913173 |
963 | E>K | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1317381116 CA341047527 |
966 | L>* | No |
ClinGen gnomAD |
|
|
rs773913597 CA945775 |
967 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1220132406 CA341046813 |
969 | N>H | No |
ClinGen TOPMed gnomAD |
|
|
CA945774 rs368308266 |
969 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA945773 rs748816269 |
971 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA945771 rs770286045 |
972 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA945772 rs779478584 |
972 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs746437170 CA945770 |
973 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA341046762 rs1293687080 |
973 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA26624869 rs954094678 |
975 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs570133605 CA945768 |
978 | I>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs751924199 CA945767 |
981 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs777890434 CA945766 |
982 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945763 rs765341582 |
983 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945764 rs752840298 |
983 | M>L | No |
ClinGen ExAC |
|
|
rs752159277 CA945762 |
984 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945761 rs750434144 |
985 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1006178013 CA26624788 |
986 | P>Q | No |
ClinGen Ensembl |
|
|
CA341046644 rs139727149 |
988 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs145692164 CA945760 |
988 | Y>H | No |
ClinGen ESP ExAC |
|
|
rs768203734 CA945757 |
989 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774145972 CA945758 |
989 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1386283535 CA341046630 |
991 | K>E | No |
ClinGen TOPMed |
|
|
CA341046625 rs1223399649 |
991 | K>N | No |
ClinGen gnomAD |
|
|
rs1440383946 CA341046618 |
992 | V>G | No |
ClinGen TOPMed |
|
|
CA26624527 rs532368957 |
996 | T>A | No |
ClinGen 1000Genomes |
|
| TCGA novel | 997 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341046571 rs140136537 |
997 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1383805542 CA341046560 |
999 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs764012513 CA945736 |
999 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762719622 CA945735 |
999 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA945734 rs143279701 |
1000 | D>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA945733 rs370995086 |
1001 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA945732 rs148381777 COSM1561036 |
1002 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA341046515 rs1470858969 |
1006 | L>S | No |
ClinGen gnomAD |
|
|
CA945729 rs747485145 |
1007 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs773588501 CA945728 |
1009 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs377715866 CA945727 |
1010 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200606149 CA26624468 |
1013 | N>H | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs747572458 CA26624452 |
1013 | N>K | No |
ClinGen gnomAD |
|
|
CA945725 rs144720491 |
1015 | E>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs755200362 CA945724 |
1016 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763919508 CA341046428 |
1020 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
CA945718 rs763919508 |
1020 | K>Q | No |
ClinGen ExAC |
|
|
rs889015452 CA26624397 |
1021 | R>I | No |
ClinGen Ensembl |
|
|
rs1239228525 CA341046401 |
1024 | S>A | No |
ClinGen gnomAD |
|
|
rs925771499 CA26624372 |
1024 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs764895405 CA945715 |
1025 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945714 rs759132786 |
1026 | S>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1030 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA945712 rs765981693 |
1033 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1420435389 CA341046329 |
1035 | D>G | No |
ClinGen gnomAD |
|
|
CA945709 rs772667163 |
1035 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA945705 rs749588162 |
1036 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs377647325 CA945707 |
1036 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs377647325 CA945706 |
1036 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs780121357 CA945704 |
1037 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs916924806 CA26624257 |
1039 | Q>* | No |
ClinGen Ensembl |
|
|
CA945703 rs756263131 |
1039 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341046300 rs1445636825 |
1040 | V>L | No |
ClinGen gnomAD |
|
|
CA945701 rs771793557 |
1041 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1183896046 CA341046286 |
1042 | Y>C | No |
ClinGen Ensembl |
|
|
rs201222637 CA26624192 |
1045 | K>N | No |
ClinGen Ensembl |
|
|
rs764946665 CA945698 |
1046 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM287412 CA945697 rs754765102 |
1047 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1176059979 CA341046235 |
1048 | D>V | No |
ClinGen TOPMed |
|
|
CA341046238 rs1408390840 |
1048 | D>Y | No |
ClinGen gnomAD |
|
|
CA341046222 rs1376646428 |
1050 | V>G | No |
ClinGen TOPMed |
|
|
CA26623070 rs1026758962 |
1050 | V>I | No |
ClinGen gnomAD |
|
|
rs543444471 CA341046213 |
1052 | L>V | No |
ClinGen gnomAD |
|
|
CA341046209 rs1372928795 |
1053 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs558746432 CA945682 |
1055 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945683 rs147693313 |
1055 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA945680 rs778809806 |
1056 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA26622995 rs778809806 |
1056 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1056 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA26623001 rs778809806 |
1056 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945678 rs777243838 |
1059 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1557832722 CA341046151 |
1061 | I>M | No |
ClinGen Ensembl |
|
|
CA945677 rs779776511 |
1061 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA26622946 rs1051937552 |
1062 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1447024154 CA341046142 |
1063 | V>E | No |
ClinGen gnomAD |
|
|
rs755663970 CA945676 |
1065 | R>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1066 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1069 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767200385 CA945674 |
1069 | S>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1069 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA26622936 rs756087240 |
1071 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA341046066 rs1440093185 |
1074 | I>M | No |
ClinGen gnomAD |
|
| TCGA novel | 1074 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761389251 CA945673 |
1074 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201708032 CA945672 |
1075 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945671 rs764662804 |
1077 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA26622913 rs916263788 |
1078 | S>N | No |
ClinGen Ensembl |
|
|
rs1447705724 CA341046021 |
1081 | F>S | No |
ClinGen TOPMed |
|
|
CA26622585 rs892526483 |
1084 | L>F | No |
ClinGen gnomAD |
|
|
CA341045993 rs1361531480 |
1085 | D>N | No |
ClinGen gnomAD |
|
|
rs764687052 CA945650 |
1087 | Q>* | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1088 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA945649 rs763315039 |
1090 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1090 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA945647 rs765588815 |
1091 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945648 rs765588815 |
1091 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1092 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1093 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs560418657 CA945646 |
1095 | L>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA26622548 rs370662504 |
1096 | E>G | No |
ClinGen Ensembl |
|
|
CA945645 rs776890094 |
1098 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766558332 CA945644 |
1099 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA341045894 rs1360613420 |
1099 | R>S | No |
ClinGen gnomAD |
|
|
rs201592712 CA945643 |
1105 | T>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA945642 rs773217064 |
1107 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1344846 rs768642836 CA945641 |
1110 | S>Y | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1427724407 CA341045790 |
1114 | I>F | No |
ClinGen gnomAD |
|
| TCGA novel | 1114 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs775482157 CA945640 |
1117 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA945639 rs775482157 |
1117 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA26622491 rs766462393 |
1119 | H>Q | No |
ClinGen Ensembl |
|
|
rs769522086 CA945638 |
1119 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs745625607 CA945637 |
1121 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA341045738 rs1268076642 |
1122 | I>V | No |
ClinGen gnomAD |
|
|
rs781020900 CA945636 |
1123 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs1350626407 CA341045731 |
1123 | S>P | No |
ClinGen TOPMed |
|
|
CA341045723 rs1489871823 |
1124 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA945635 rs187629987 |
1125 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA341045715 rs147501546 |
1126 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA945634 rs147501546 |
1126 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA341045716 rs147501546 |
1126 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1307320223 CA341045712 |
1126 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 1130 | K>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777084875 CA945633 |
1130 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770714735 CA945615 |
1132 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA26649561 rs757895749 |
1134 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA945612 rs757895749 |
1134 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1393966301 CA341053864 |
1134 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA341053852 rs1465990675 |
1135 | S>N | No |
ClinGen gnomAD |
|
|
CA945611 rs747665088 |
1138 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1557764957 CA341053816 |
1138 | P>S | No |
ClinGen Ensembl |
|
| TCGA novel | 1138 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA26649541 rs972641605 |
1140 | N>D | No |
ClinGen Ensembl |
|
|
CA26649540 rs962291504 |
1141 | R>* | No |
ClinGen TOPMed |
|
|
CA945610 rs779320203 |
1141 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341053783 rs1379461543 |
1142 | E>K | No |
ClinGen gnomAD |
|
|
rs1481587455 CA341053763 |
1143 | C>Y | No |
ClinGen TOPMed |
|
|
rs755418126 CA945609 |
1144 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754204397 COSM227195 CA945608 |
1144 | N>S | skin [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA341053717 rs1248741457 |
1147 | C>F | No |
ClinGen gnomAD |
|
|
rs1180687810 CA341053710 |
1148 | K>E | No |
ClinGen gnomAD |
|
|
rs745836745 CA26649519 |
1150 | K>R | No |
ClinGen Ensembl |
|
|
rs150703340 CA945607 |
1151 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1458515791 CA341053666 |
1151 | H>R | No |
ClinGen gnomAD |
|
|
rs767743030 CA945604 |
1155 | H>N | No |
ClinGen ExAC gnomAD |
|
|
rs751605402 CA945603 |
1155 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs751605402 CA945602 |
1155 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1417024068 CA341053608 |
1156 | D>G | No |
ClinGen TOPMed |
|
|
CA341053594 rs74938180 |
1157 | C>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA945601 rs74938180 |
1157 | C>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs759482816 CA945600 |
1158 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341053537 rs1171224025 |
1159 | K>N | No |
ClinGen TOPMed |
|
|
CA341053515 rs1464503780 |
1162 | V>I | No |
ClinGen TOPMed |
|
|
CA341053489 rs1179064123 |
1164 | Q>* | No |
ClinGen TOPMed |
|
|
CA341053487 rs1570747219 |
1164 | Q>P | No |
ClinGen Ensembl |
|
|
CA341053477 rs1205009090 |
1165 | K>E | No |
ClinGen gnomAD |
|
|
CA945589 rs749852216 |
1165 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA945590 rs768148920 |
1165 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA26649383 rs1052368835 |
1166 | S>L | No |
ClinGen TOPMed |
|
|
rs750756102 CA945586 |
1168 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs540774438 CA945587 |
1168 | I>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs780515825 CA945588 |
1168 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs757440021 CA945584 |
1172 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs751599543 CA341053376 |
1174 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA945583 rs751599543 COSM1209624 |
1174 | S>Y | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs142421687 CA945582 |
1175 | S>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs763115821 CA945581 |
1176 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA26649307 rs892233117 |
1176 | Y>N | No |
ClinGen TOPMed |
|
|
CA341053345 rs1382338293 |
1177 | L>F | No |
ClinGen TOPMed |
|
|
CA945580 rs576734052 |
1178 | S>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 1179 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA26649266 rs939210373 |
1181 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1473991704 CA341053295 |
1182 | N>K | No |
ClinGen gnomAD |
|
|
CA26649258 rs1056200813 |
1184 | N>S | No |
ClinGen Ensembl |
|
|
CA945579 rs766387363 |
1186 | V>D | No |
ClinGen ExAC gnomAD |
|
|
rs1303059584 CA341053236 |
1188 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs773014048 CA945577 |
1189 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs145403079 CA945576 |
1190 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs576011377 CA945575 |
1193 | K>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs773978254 CA945574 |
1194 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945573 rs376664019 |
1194 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 1194 | R>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA945550 rs746457004 |
1198 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs771378791 CA945548 |
1201 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945547 rs747351605 |
1202 | S>Y | No |
ClinGen ExAC |
|
|
CA341052584 rs375403709 |
1204 | S>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375403709 CA945546 |
1204 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371441106 CA945545 |
1204 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs748253423 CA26648172 |
1206 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748253423 CA945544 |
1206 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341052526 rs1469684948 |
1209 | E>V | No |
ClinGen gnomAD |
|
|
rs779199817 CA945543 |
1211 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA26648164 rs368824348 |
1211 | G>D | No |
ClinGen ESP TOPMed |
|
|
CA341052482 rs1225640899 |
1212 | F>C | No |
ClinGen TOPMed gnomAD |
|
|
rs147905224 CA945541 |
1214 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1232001565 CA341052442 |
1215 | K>N | No |
ClinGen gnomAD |
|
|
CA945540 rs767326294 |
1217 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs1557761175 CA341052422 |
1217 | S>Y | No |
ClinGen Ensembl |
|
|
CA341052416 rs1258393542 |
1218 | L>F | No |
ClinGen gnomAD |
|
|
CA341052415 rs1202975304 |
1218 | L>H | No |
ClinGen gnomAD |
|
|
CA945536 rs763746408 |
1219 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945537 rs376142463 |
1219 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1368370023 CA341052401 |
1220 | S>G | No |
ClinGen TOPMed |
|
|
rs1570740284 CA341052394 |
1220 | S>T | No |
ClinGen Ensembl |
|
|
rs755216470 CA26648114 |
1221 | I>V | No |
ClinGen gnomAD |
|
|
rs1557761045 CA341052373 |
1222 | S>T | No |
ClinGen Ensembl |
|
|
CA341052365 rs1279216444 |
1223 | R>G | No |
ClinGen gnomAD |
|
|
rs1309368134 CA341052360 |
1223 | R>K | No |
ClinGen TOPMed |
|
| TCGA novel | 1224 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1225 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA945516 rs764769748 |
1229 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341052141 rs1449312754 COSM2157475 |
1229 | I>V | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA26647614 rs759121269 |
1230 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945515 rs759121269 |
1230 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1421862147 CA341052052 |
1234 | I>T | No |
ClinGen gnomAD |
|
|
CA945512 rs761198979 |
1234 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773839715 CA945511 |
1235 | M>R | No |
ClinGen ExAC gnomAD |
|
|
rs916117682 CA26647598 |
1237 | Q>* | No |
ClinGen Ensembl |
|
|
rs772612244 CA945510 |
1237 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341051979 rs1214592775 |
1238 | W>* | No |
ClinGen gnomAD |
|
|
rs762237061 CA945509 |
1238 | W>G | No |
ClinGen ExAC gnomAD |
|
|
rs762237061 CA341051994 |
1238 | W>R | No |
ClinGen ExAC gnomAD |
|
|
rs866263287 CA26647587 |
1240 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs374375439 CA945508 |
1243 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA945507 rs768706788 |
1244 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341051862 rs1244282284 |
1244 | Y>C | No |
ClinGen gnomAD |
|
|
CA26647575 rs761447688 |
1245 | G>R | No |
ClinGen Ensembl |
|
|
CA341051833 rs1315205379 |
1246 | K>E | No |
ClinGen gnomAD |
|
|
CA341051816 rs1300445773 |
1246 | K>N | No |
ClinGen TOPMed |
|
|
rs749395890 CA945506 |
1247 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA945505 rs202193070 |
1248 | R>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA341051797 rs202193070 |
1248 | R>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs148782948 CA945504 |
1251 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372320648 CA945503 |
1254 | Y>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 1255 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs758233903 CA945501 |
1258 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA945480 rs747989952 |
1262 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1265 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs556591938 CA945479 |
1268 | N>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA341050592 rs1256511728 |
1268 | N>K | No |
ClinGen gnomAD |
|
|
rs556591938 CA341050598 |
1268 | N>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA341050573 rs1271274247 |
1270 | V>D | No |
ClinGen gnomAD |
|
|
rs1570717600 CA341050565 |
1271 | W>G | No |
ClinGen Ensembl |
|
|
rs754801131 CA945478 |
1271 | W>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748939655 CA945477 |
1274 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA945475 rs376093340 |
1275 | D>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs779818871 CA945476 |
1275 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1017777940 CA26644590 |
1277 | E>K | No |
ClinGen TOPMed |
|
|
rs768151592 CA945473 |
1278 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1447942464 CA341050431 |
1282 | T>N | No |
ClinGen TOPMed |
|
|
rs538274561 CA341050386 |
1286 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA945471 rs538274561 |
1286 | T>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200074366 CA945469 |
1287 | D>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200074366 CA945468 |
1287 | D>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA945466 rs370338028 |
1288 | T>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370338028 CA945467 |
1288 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA341050284 rs1160233749 |
1295 | G>R | No |
ClinGen TOPMed |
|
|
rs752053945 CA945451 |
1296 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA341049624 rs1448831022 |
1297 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1313608525 CA341049606 |
1298 | N>S | No |
ClinGen gnomAD |
|
|
rs1465613110 CA341049574 |
1299 | T>I | No |
ClinGen TOPMed |
|
|
CA26643913 rs765429338 |
1300 | L>F | No |
ClinGen TOPMed |
|
|
CA341049534 rs1419171546 |
1301 | S>I | No |
ClinGen gnomAD |
|
|
CA341049540 rs1419171546 |
1301 | S>N | No |
ClinGen gnomAD |
|
|
rs764632997 CA945450 |
1303 | S>N | No |
ClinGen ExAC |
|
|
rs758721782 CA945449 |
1306 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA26643898 rs867643442 |
1306 | G>R | No |
ClinGen Ensembl |
|
|
CA341049391 rs1160623243 |
1309 | L>V | No |
ClinGen gnomAD |
|
|
CA945448 rs753011716 |
1310 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA945447 rs765458676 |
1312 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1396930875 CA341049332 |
1313 | E>K | No |
ClinGen TOPMed |
|
| TCGA novel | 1316 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1444684094 CA341049230 |
1317 | K>N | No |
ClinGen gnomAD |
|
|
CA341049237 rs1333125672 |
1317 | K>R | No |
ClinGen TOPMed |
|
|
CA26643876 rs754628589 |
1318 | F>L | No |
ClinGen Ensembl |
|
|
rs760774033 CA945443 |
1322 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs766429693 CA945444 |
1322 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766429693 CA341049121 |
1322 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341049082 rs1355414264 |
1324 | N>D | No |
ClinGen gnomAD |
|
|
rs768585567 CA945441 |
1324 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs762665484 CA945440 |
1325 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA945424 rs750456971 |
1331 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150756783 CA945423 |
1332 | M>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA26641747 rs139164398 |
1332 | M>V | No |
ClinGen 1000Genomes gnomAD |
|
|
rs201980911 CA945422 |
1333 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA341048142 rs1570698496 |
1334 | D>N | No |
ClinGen Ensembl |
|
|
rs749502424 CA26641713 |
1335 | I>V | No |
ClinGen Ensembl |
|
|
CA341048119 rs1395586988 |
1336 | S>T | No |
ClinGen gnomAD |
|
|
rs769759236 CA945420 |
1338 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA341048053 rs1426377892 |
1342 | M>T | No |
ClinGen gnomAD |
|
|
rs759372572 CA945419 |
1342 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA26641668 rs112115414 |
1343 | P>L | No |
ClinGen Ensembl |
|
|
rs980029659 CA26641639 |
1349 | S>F | No |
ClinGen Ensembl |
|
|
rs1244638909 CA341047908 |
1350 | M>K | No |
ClinGen gnomAD |
|
|
rs770569328 CA945417 |
1350 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA945416 rs200535976 |
1351 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA26641609 rs919783140 |
1353 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs777271687 CA945415 |
1354 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA341047770 rs1319966505 |
1357 | A>V | No |
ClinGen gnomAD |
|
|
rs1215299373 CA341047738 |
1359 | N>I | No |
ClinGen gnomAD |
|
|
CA26641592 rs201393479 |
1360 | A>E | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA26641579 rs201393479 |
1360 | A>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1372205773 CA341047707 |
1362 | I>N | No |
ClinGen gnomAD |
|
|
CA945410 rs185069773 |
1362 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 1363 | V>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341047617 rs1273319361 |
1364 | H>Y | No |
ClinGen TOPMed |
|
|
CA945390 rs747628741 |
1366 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs904090001 CA26641472 |
1367 | E>G | No |
ClinGen Ensembl |
|
|
CA341047532 rs1212369981 |
1368 | R>G | No |
ClinGen TOPMed |
|
|
CA26641466 rs1022906634 |
1369 | K>Q | No |
ClinGen TOPMed |
|
|
CA341047484 rs1447884999 |
1370 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA341047470 rs1451575271 |
1371 | Q>H | No |
ClinGen TOPMed |
|
|
rs565616503 CA945389 |
1372 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341047434 rs1434795518 |
1375 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA341047413 rs749654723 |
1377 | I>F | No |
ClinGen ExAC gnomAD |
|
|
CA945387 rs749654723 |
1377 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs781238872 CA945383 |
1381 | C>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1381 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA945382 rs530895801 |
1384 | F>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA945381 rs190831701 |
1385 | S>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA945380 rs765280416 |
1387 | K>E | No |
ClinGen ExAC gnomAD |
|
| rs759278255 | 1388 | N>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| rs759278255 | 1388 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs754896938 CA945378 |
1391 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341047229 rs1308222128 |
1393 | N>S | No |
ClinGen gnomAD |
|
|
rs1228078708 CA341047215 |
1394 | Y>F | No |
ClinGen TOPMed gnomAD |
|
|
CA341047201 CA945375 rs760369118 |
1395 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1414881310 CA341047190 |
1396 | K>N | No |
ClinGen gnomAD |
|
|
rs369277085 CA945374 |
1397 | V>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1295994459 CA341047175 |
1398 | D>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 1398 | D>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA945373 rs767120204 |
1399 | F>C | No |
ClinGen ExAC gnomAD |
|
|
rs761322247 CA945372 |
1400 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs766204131 | 1400 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| rs766204131 | 1401 | I>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA945368 rs768147001 |
1404 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs12733308 CA26641335 |
1405 | E>G | No |
ClinGen Ensembl |
|
|
rs1311538219 CA341047059 |
1408 | K>Q | No |
ClinGen TOPMed |
|
|
rs1434042163 CA341046952 |
1414 | M>V | No |
ClinGen gnomAD |
|
|
CA945353 rs181256367 |
1415 | Y>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA945351 rs763642049 |
1420 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341046894 rs1205392065 |
1422 | D>N | No |
ClinGen Ensembl |
|
| TCGA novel | 1424 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1471809767 CA341046867 |
1425 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA945349 rs762338817 |
1426 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA341046848 rs376608073 |
1427 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs371512737 CA945347 |
1428 | L>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1484000718 CA341046827 |
1429 | G>E | No |
ClinGen TOPMed |
|
|
rs1190759896 CA341046821 |
1430 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 1432 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA945346 rs759959365 |
1433 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341046779 rs1487727392 |
1433 | G>S | No |
ClinGen gnomAD |
|
|
rs189998243 CA945345 |
1434 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA341046755 rs1218760392 |
1435 | F>L | No |
ClinGen gnomAD |
1 associated diseases with A2PYH4
[MIM: 615724]: Premature ovarian failure 9 (POF9)
An ovarian disorder defined as the cessation of ovarian function under the age of 40 years. It is characterized by oligomenorrhea or amenorrhea, in the presence of elevated levels of serum gonadotropins and low estradiol. {ECO:0000303|PubMed:24597873}. Note=The disease may be caused by variants affecting the gene represented in this entry.
Without disease ID
- An ovarian disorder defined as the cessation of ovarian function under the age of 40 years. It is characterized by oligomenorrhea or amenorrhea, in the presence of elevated levels of serum gonadotropins and low estradiol. {ECO:0000303|PubMed:24597873}. Note=The disease may be caused by variants affecting the gene represented in this entry.
1 regional properties for A2PYH4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Protein HIRA-like, C-terminal | 552 - 796 | IPR011494 |
Functions
| Description | ||
|---|---|---|
| EC Number | 3.6.4.12 | Acting on ATP; involved in cellular and subcellular movement |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| ATP hydrolysis activity | Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient. |
| DNA helicase activity | Unwinding of a DNA helix, driven by ATP hydrolysis. |
| nucleic acid binding | Binding to a nucleic acid. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| resolution of meiotic recombination intermediates | The cleavage and rejoining of intermediates, such as Holliday junctions, formed during meiotic recombination to produce two intact molecules in which genetic material has been exchanged. |
2 homologous proteins in AiPD
| 10 | 20 | 30 | 40 | 50 | 60 |
| MLKSNDCLFS | LENLFFEKPD | EVENHPDNEK | SLDWFLPPAP | LISEIPDTQE | LEEELESHKL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LGQEKRPKML | TSNLKITNED | TNYISLTQKF | QFAFPSDKYE | QDDLNLEGVG | NNDLSHIAGK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LTYASQKYKN | HIGTEIAPEK | SVPDDTKLVN | FAEDKGESTS | VFRKRLFKIS | DNIHGSAYSN |
| 190 | 200 | 210 | 220 | 230 | 240 |
| DNELDSHIGS | VKIVQTEMNK | GKSRNYSNSK | QKFQYSANVF | TANNAFSASE | IGEGMFKAPS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| FSVAFQPHDI | QEVTENGLGS | LKAVTEIPAK | FRSIFKEFPY | FNYIQSKAFD | DLLYTDRNFV |
| 310 | 320 | 330 | 340 | 350 | 360 |
| ICAPTGSGKT | VVFELAITRL | LMEVPLPWLN | IKIVYMAPIK | ALCSQRFDDW | KEKFGPIGLN |
| 370 | 380 | 390 | 400 | 410 | 420 |
| CKELTGDTVM | DDLFEIQHAH | IIMTTPEKWD | SMTRKWRDNS | LVQLVRLFLI | DEVHIVKDEN |
| 430 | 440 | 450 | 460 | 470 | 480 |
| RGPTLEVVVS | RMKTVQSVSQ | TLKNTSTAIP | MRFVAVSATI | PNAEDIAEWL | SDGERPAVCL |
| 490 | 500 | 510 | 520 | 530 | 540 |
| KMDESHRPVK | LQKVVLGFPC | SSNQTEFKFD | LTLNYKIASV | IQMYSDQKPT | LVFCATRKGV |
| 550 | 560 | 570 | 580 | 590 | 600 |
| QQAASVLVKD | AKFIMTVEQK | QRLQKYAYSV | RDSKLRDILK | DGAAYHHAGM | ELSDRKVVEG |
| 610 | 620 | 630 | 640 | 650 | 660 |
| AFTVGDLPVL | FTTSTLAMGV | NLPAHLVVIK | STMHYAGGLF | EEYSETDILQ | MIGRAGRPQF |
| 670 | 680 | 690 | 700 | 710 | 720 |
| DTTATAVIMT | RLSTRDKYIQ | MLACRDTVES | SLHRHLIEHL | NAEIVLHTIT | DVNIAVEWIR |
| 730 | 740 | 750 | 760 | 770 | 780 |
| STLLYIRALK | NPSHYGFASG | LNKDGIEAKL | QELCLKNLND | LSSLDLIKMD | EGVNFKPTEA |
| 790 | 800 | 810 | 820 | 830 | 840 |
| GRLMAWYYIT | FETVKKFYTI | SGKETLSDLV | TLIAGCKEFL | DIQLRINEKK | TLNTLNKDPN |
| 850 | 860 | 870 | 880 | 890 | 900 |
| RITIRFPMEG | RIKTREMKVN | CLIQAQLGCI | PIQDFALTQD | TAKIFRHGSR | ITRWLSDFVA |
| 910 | 920 | 930 | 940 | 950 | 960 |
| AQEKKFAVLL | NSLILAKCFR | CKLWENSLHV | SKQLEKIGIT | LSNAIVNAGL | TSFKKIEETD |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| ARELELILNR | HPPFGTQIKE | TVMYLPKYEL | KVEQITRYSD | TTAEILVTVI | LRNFEQLQTK |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| RTASDSHYVT | LIIGDADNQV | VYLHKITDSV | LLKAGSWAKK | IAVKRALKSE | DLSINLISSE |
| 1090 | 1100 | 1110 | 1120 | 1130 | 1140 |
| FVGLDIQQKL | TVFYLEPKRF | GNQITMQRKS | ETQISHSKHS | DISTIAGPNK | GTTASKKPGN |
| 1150 | 1160 | 1170 | 1180 | 1190 | 1200 |
| RECNHLCKSK | HTCGHDCCKI | GVAQKSEIKE | STISSYLSDL | RNRNAVSSVP | PVKRLKIQMN |
| 1210 | 1220 | 1230 | 1240 | 1250 | 1260 |
| KSQSVDLKEF | GFTPKPSLPS | ISRSEYLNIS | ELPIMEQWDQ | PEIYGKVRQE | PSEYQDKEVL |
| 1270 | 1280 | 1290 | 1300 | 1310 | 1320 |
| NVNFELGNEV | WDDFDDENLE | VTSFSTDTEK | TKISGFGNTL | SSSTRGSKLP | LQESKSKFQR |
| 1330 | 1340 | 1350 | 1360 | 1370 | 1380 |
| EMSNSFVSSH | EMSDISLSNS | AMPKFSASSM | TKLPQQAGNA | VIVHFQERKP | QNLSPEIEKQ |
| 1390 | 1400 | 1410 | 1420 | 1430 | |
| CFTFSEKNPN | SSNYKKVDFF | IRNSECKKEV | DFSMYHPDDE | ADEMKSLLGI | FDGIF |