Q9Y3F4
Gene name |
STRAP (MAWD, UNRIP) |
Protein name |
Serine-threonine kinase receptor-associated protein |
Names |
MAP activator with WD repeats, UNR-interacting protein, WD-40 repeat protein PT-WD |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:11171 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9Y3F4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9Y3F4-F1 | Predicted | AlphaFoldDB |
201 variants for Q9Y3F4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs200335719 CA6468053 |
2 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA384057019 rs140693042 |
3 | M>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6468054 rs140693042 |
3 | M>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1229176360 CA384057030 |
4 | R>K | No |
ClinGen gnomAD |
|
|
rs557894238 CA6468057 |
7 | P>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA384057061 rs1259398089 |
9 | T>N | No |
ClinGen gnomAD |
|
|
rs1591981324 CA384057058 |
9 | T>P | No |
ClinGen Ensembl |
|
|
rs1259398089 CA384057062 |
9 | T>S | No |
ClinGen gnomAD |
|
| TCGA novel | 11 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6468059 rs767606744 |
12 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA384057089 rs1473659360 |
13 | H>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 13 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1474330710 CA384057109 |
17 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA384057117 rs1172990646 |
18 | V>D | No |
ClinGen gnomAD |
|
| TCGA novel | 20 | L>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1188443 CA6468060 rs773642778 |
23 | S>G | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA6468061 rs761238306 |
23 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6468062 rs144566765 |
24 | G>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs763765976 CA6468065 |
28 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA384057180 rs1354475114 |
28 | Y>H | No |
ClinGen gnomAD |
|
|
rs751196693 CA6468066 |
29 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs751196693 CA233634280 |
29 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA6468067 rs756773642 |
30 | Y>N | No |
ClinGen ExAC gnomAD |
|
|
CA6468068 rs780849482 |
32 | L>* | No |
ClinGen ExAC gnomAD |
|
|
CA384057234 rs1591981383 |
36 | C>G | No |
ClinGen Ensembl |
|
|
CA384057378 rs1222209688 |
41 | P>T | No |
ClinGen TOPMed |
|
|
rs754743986 CA6468098 |
42 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6468097 rs754743986 |
42 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200245531 CA384057454 |
52 | I>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6468100 rs200245531 |
52 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 53 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1459523849 CA384057480 |
56 | L>W | No |
ClinGen gnomAD |
|
|
rs1196898893 CA384057535 |
64 | G>R | No |
ClinGen gnomAD |
|
| TCGA novel | 64 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6468101 rs777801288 |
66 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA384057586 rs1189988255 |
72 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA6468103 rs529311415 |
74 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1475314480 CA384057607 |
75 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1221519525 CA384057606 |
75 | A>S | No |
ClinGen TOPMed |
|
|
rs1021401518 CA233634592 |
79 | A>S | No |
ClinGen TOPMed |
|
|
rs1242573212 CA384057679 |
84 | K>N | No |
ClinGen TOPMed |
|
|
rs1288123069 CA384057681 |
85 | V>M | No |
ClinGen gnomAD |
|
|
rs1354702261 CA384057692 |
86 | W>* | No |
ClinGen TOPMed |
|
|
CA233636535 rs947112729 |
87 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1368326833 CA384057712 |
89 | V>A | No |
ClinGen TOPMed |
|
|
rs377104447 CA233636537 |
89 | V>I | No |
ClinGen TOPMed |
|
|
CA384057709 rs377104447 |
89 | V>L | No |
ClinGen TOPMed |
|
|
rs1258654008 CA384057719 |
90 | S>L | No |
ClinGen gnomAD |
|
|
CA384057726 rs1405478078 |
92 | D>N | No |
ClinGen TOPMed |
|
|
CA233636540 rs150796040 |
93 | E>K | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA6468111 rs760184286 |
96 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA6468113 rs753742857 |
98 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA6468112 rs765820617 |
98 | A>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 99 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 104 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1565574389 CA384057820 |
105 | T>S | No |
ClinGen Ensembl |
|
|
rs547715659 CA6468115 |
109 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs139147519 CA6468131 |
111 | D>G | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
rs139147519 CA6468132 |
111 | D>V | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
rs765899633 CA6468130 |
111 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1347216330 CA384057875 |
112 | S>G | No |
ClinGen gnomAD |
|
| TCGA novel | 114 | Y>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM107813 rs149620856 CA233636753 |
115 | L>F | skin [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA233636755 rs1048672472 |
117 | T>A | No |
ClinGen gnomAD |
|
|
rs1273046185 CA384057914 |
117 | T>S | No |
ClinGen TOPMed |
|
| TCGA novel | 118 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 119 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA384057940 rs1359976654 |
121 | D>G | No |
ClinGen gnomAD |
|
|
CA384057951 rs1591985400 |
122 | K>N | No |
ClinGen Ensembl |
|
|
rs999690976 CA384057964 |
125 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs999690976 CA233636759 |
125 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs752651730 CA6468134 COSM172977 |
125 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1370845176 CA384057973 |
126 | I>M | No |
ClinGen gnomAD |
|
|
CA6468135 rs200103299 |
126 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed |
|
|
rs777545691 CA6468136 |
127 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 127 | Y>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA384057996 rs1318412644 |
130 | N>H | No |
ClinGen gnomAD |
|
|
rs144953681 CA6468138 |
130 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA384058007 rs1259712097 |
131 | K>R | No |
ClinGen gnomAD |
|
|
CA6468139 rs781313896 |
132 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6468140 rs745977935 |
132 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA6468156 rs767598118 |
137 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA384058091 rs1458533168 |
141 | G>V | No |
ClinGen TOPMed |
|
|
CA384058124 rs1260383167 |
146 | I>M | No |
ClinGen TOPMed |
|
| rs1470408003 | 149 | A>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs780287241 CA6468159 |
149 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA384058147 rs1197060982 COSM937633 |
150 | L>V | endometrium [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA6468160 rs749808917 |
152 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA384058174 rs1565575759 |
153 | S>R | No |
ClinGen Ensembl |
|
|
CA384058183 rs1476294209 |
155 | D>N | No |
ClinGen gnomAD |
|
|
CA384058186 rs1565575763 |
155 | D>V | No |
ClinGen Ensembl |
|
|
rs755591994 CA384058215 |
159 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755591994 CA6468161 |
159 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1230056609 CA384058224 |
160 | S>F | No |
ClinGen TOPMed |
|
|
rs1393846141 CA384058235 |
162 | D>G | No |
ClinGen gnomAD |
|
|
CA233637820 rs149067547 |
162 | D>H | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1219426417 CA384058261 |
166 | V>L | No |
ClinGen gnomAD |
|
|
rs902903501 CA233637823 |
167 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs902903501 CA384058268 |
167 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA6468181 rs754011605 |
168 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA384058288 rs1257134211 |
169 | W>R | No |
ClinGen gnomAD |
|
|
rs755139045 CA6468182 |
171 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755139045 CA384058307 |
171 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6468183 rs779238193 |
172 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs779238193 CA384058314 |
172 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA6468184 rs753260309 |
173 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs531501241 CA6468185 |
173 | T>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA384058327 rs1397385547 |
174 | M>I | No |
ClinGen gnomAD |
|
|
CA384058324 rs1166669636 |
174 | M>T | No |
ClinGen gnomAD |
|
|
CA384058321 rs1430192833 |
174 | M>V | No |
ClinGen TOPMed |
|
|
COSM937635 rs1416560685 CA384058337 |
176 | E>* | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA384058347 rs1435755350 |
177 | V>A | No |
ClinGen gnomAD |
|
|
CA6468187 rs745503480 |
178 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs143256276 CA6468188 |
178 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA384058367 rs1320966580 |
181 | N>D | No |
ClinGen gnomAD |
|
|
rs146678081 CA6468190 |
181 | N>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA384058383 rs1591987838 |
183 | N>D | No |
ClinGen Ensembl |
|
|
rs140234137 CA233638183 |
183 | N>S | No |
ClinGen ESP gnomAD |
|
|
rs1041121617 CA233638185 |
187 | S>G | No |
ClinGen TOPMed |
|
|
rs1565576163 CA384058411 |
187 | S>T | No |
ClinGen Ensembl |
|
|
CA233638187 rs943324170 |
189 | M>V | No |
ClinGen Ensembl |
|
|
rs761817170 CA6468193 |
193 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs369553392 COSM692994 CA6468192 |
193 | P>S | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA gnomAD |
|
rs771760502 CA6468194 |
196 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs773118484 CA6468195 |
198 | L>S | No |
ClinGen ExAC |
|
| TCGA novel | 202 | Y>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1285135784 CA384058528 |
204 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA233638197 rs375544344 |
205 | S>C | No |
ClinGen ESP |
|
|
CA6468197 rs766668044 |
206 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA6468198 rs754134145 |
207 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1421268864 CA384058609 |
215 | D>N | No |
ClinGen gnomAD |
|
|
rs1364054432 CA384058622 |
216 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA384058617 rs1182952173 |
216 | P>T | No |
ClinGen gnomAD |
|
|
CA384058624 rs1472055918 |
217 | I>F | No |
ClinGen gnomAD |
|
|
rs765215889 CA6468217 |
219 | S>C | No |
ClinGen ExAC |
|
|
CA384058645 rs1200834560 |
220 | F>V | No |
ClinGen gnomAD |
|
|
rs1156391069 CA384058656 |
221 | E>G | No |
ClinGen gnomAD |
|
|
CA384058663 rs1419406234 |
222 | A>G | No |
ClinGen gnomAD |
|
|
CA6468218 rs752866252 |
225 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1325173388 CA384058680 |
225 | T>S | No |
ClinGen gnomAD |
|
|
rs1388429251 CA384058693 |
227 | N>I | No |
ClinGen TOPMed gnomAD |
|
|
CA384058701 rs1392972353 |
228 | S>F | No |
ClinGen gnomAD |
|
|
rs1329262950 CA384058719 |
231 | L>P | No |
ClinGen gnomAD |
|
|
CA6468219 rs145164927 |
232 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA6468220 rs764626491 |
233 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1238158252 CA384058758 |
237 | F>L | No |
ClinGen TOPMed |
|
|
rs1264249566 CA384058766 |
238 | L>V | No |
ClinGen gnomAD |
|
|
CA6468225 rs185224819 |
242 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
| TCGA novel | 243 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6468226 rs754719468 |
244 | D>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 248 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs531686762 CA6468228 |
254 | S>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 255 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 256 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1465717027 CA384058946 |
261 | Y>C | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 263 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA384058993 rs1167800635 |
268 | I>V | No |
ClinGen TOPMed |
|
|
rs553115575 CA233639486 |
272 | R>S | No |
ClinGen 1000Genomes |
|
|
CA6468245 rs764894800 |
274 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA384059067 rs1368360222 |
275 | P>A | No |
ClinGen TOPMed |
|
|
CA233639494 rs374693662 |
276 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| TCGA novel | 278 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs374482822 CA233639500 |
280 | Y>C | No |
ClinGen ESP |
|
|
rs1465678599 CA384059133 |
280 | Y>H | No |
ClinGen gnomAD |
|
|
rs1565577504 CA384059179 |
283 | G>V | No |
ClinGen Ensembl |
|
|
CA6468249 rs777491937 |
298 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1253821180 CA384059379 COSM937640 |
299 | T>M | endometrium [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA384059417 rs1447576787 |
302 | L>F | No |
ClinGen gnomAD |
|
| TCGA novel | 304 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA233639522 rs865946903 |
307 | L>P | No |
ClinGen Ensembl |
|
|
rs867656774 CA233639525 |
308 | P>S | No |
ClinGen Ensembl |
|
|
CA6468267 rs375283378 |
310 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756855420 CA6468269 |
311 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1228636670 CA384059816 |
312 | S>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1287244999 CA384059838 |
314 | E>K | No |
ClinGen gnomAD |
|
|
CA233639813 rs565040350 |
320 | I>M | No |
ClinGen 1000Genomes |
|
|
rs150448537 CA6468273 |
320 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA233639809 rs1004702555 |
320 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs906523286 CA233639815 |
321 | G>V | No |
ClinGen Ensembl |
|
|
rs777706138 CA233639821 |
322 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1219189364 CA384059942 |
325 | T>A | No |
ClinGen gnomAD |
|
|
CA384059944 rs1234380866 |
325 | T>I | No |
ClinGen gnomAD |
|
|
rs768917886 CA6468276 |
327 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs746834109 CA6468277 |
329 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs143931116 CA6468303 |
331 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA384060125 rs1436183128 |
332 | E>G | No |
ClinGen gnomAD |
|
|
CA384060117 rs1340134340 |
332 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1029734714 CA233640407 |
336 | E>A | No |
ClinGen TOPMed |
|
| TCGA novel | 336 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs748372811 CA6468305 |
337 | N>T | No |
ClinGen ExAC gnomAD |
|
|
rs772131985 CA6468306 |
338 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs867398202 CA233640412 |
338 | S>A | No |
ClinGen Ensembl |
|
|
CA384060211 rs1234150249 |
339 | D>G | No |
ClinGen gnomAD |
|
|
CA6468307 rs777773134 |
340 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777773134 CA384060224 |
340 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6468309 rs371184789 |
342 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 343 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 344 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA384060291 rs1474125124 |
345 | A>G | No |
ClinGen Ensembl |
|
|
rs1166953541 CA384060305 |
347 | D>G | No |
ClinGen Ensembl |
|
|
CA384060313 rs1349705233 |
348 | V>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
No associated diseases with Q9Y3F4
7 regional properties for Q9Y3F4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | WD40 repeat | 3 - 45 | IPR001680-1 |
| repeat | WD40 repeat | 48 - 210 | IPR001680-2 |
| repeat | WD40 repeat | 213 - 251 | IPR001680-3 |
| repeat | WD40 repeat | 254 - 293 | IPR001680-4 |
| repeat | G-protein beta WD-40 repeat | 74 - 88 | IPR020472-1 |
| repeat | G-protein beta WD-40 repeat | 115 - 129 | IPR020472-2 |
| repeat | G-protein beta WD-40 repeat | 280 - 294 | IPR020472-3 |
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| SMN complex | A protein complex that contains the survival motor neuron (SMN) protein and at least eight additional integral components, including the Gemin2-8 and Unrip proteins; the complex is found in the cytoplasm and in nuclear Gems, and is involved in spliceosomal snRNP assembly in the cytoplasm and in pre-mRNA splicing in the nucleus. |
| SMN-Sm protein complex | A protein complex formed by the association of several methylated Sm proteins with the SMN complex; the latter contains the survival motor neuron (SMN) protein and at least eight additional integral components, including the Gemin2-8 and unrip proteins; additional proteins, including galectin-1 and galectin-3, are also found in the SMN-SM complex. The SMN-Sm complex is involved in spliceosomal snRNP assembly in the cytoplasm. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| signaling receptor binding | Binding to one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function. |
| U2 snRNP binding | Binding to a U2 small nuclear ribonucleoprotein particle. |
6 GO annotations of biological process
| Name | Definition |
|---|---|
| alternative mRNA splicing, via spliceosome | The process of generating multiple mRNA molecules from a given set of exons by differential use of exons from the primary transcript(s) to form multiple mature mRNAs that vary in their exon composition. |
| maintenance of gastrointestinal epithelium | Protection of epithelial surfaces of the gastrointestinal tract from proteolytic and caustic digestive agents. |
| negative regulation of transcription by RNA polymerase II | Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II. |
| negative regulation of transforming growth factor beta receptor signaling pathway | Any process that stops, prevents, or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway. |
| neuron differentiation | The process in which a relatively unspecialized cell acquires specialized features of a neuron. |
| spliceosomal snRNP assembly | The aggregation, arrangement and bonding together of one or more snRNA and multiple protein components to form a ribonucleoprotein complex that is involved in formation of the spliceosome. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAMRQTPLTC | SGHTRPVVDL | AFSGITPYGY | FLISACKDGK | PMLRQGDTGD | WIGTFLGHKG |
| 70 | 80 | 90 | 100 | 110 | 120 |
| AVWGATLNKD | ATKAATAAAD | FTAKVWDAVS | GDELMTLAHK | HIVKTVDFTQ | DSNYLLTGGQ |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DKLLRIYDLN | KPEAEPKEIS | GHTSGIKKAL | WCSEDKQILS | ADDKTVRLWD | HATMTEVKSL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| NFNMSVSSME | YIPEGEILVI | TYGRSIAFHS | AVSLDPIKSF | EAPATINSAS | LHPEKEFLVA |
| 250 | 260 | 270 | 280 | 290 | 300 |
| GGEDFKLYKY | DYNSGEELES | YKGHFGPIHC | VRFSPDGELY | ASGSEDGTLR | LWQTVVGKTY |
| 310 | 320 | 330 | 340 | ||
| GLWKCVLPEE | DSGELAKPKI | GFPETTEEEL | EEIASENSDC | IFPSAPDVKA |