Q9UNA4
Gene name |
POLI (RAD30B) |
Protein name |
DNA polymerase iota |
Names |
Eta2, RAD30 homolog B |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:11201 |
EC number |
2.7.7.7: Nucleotidyltransferases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
47 structures for Q9UNA4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 1T3N | X-ray | 230 A | A/B | 52-439 | PDB |
| 1ZET | X-ray | 230 A | A | 52-439 | PDB |
| 2ALZ | X-ray | 250 A | A | 50-439 | PDB |
| 2DPI | X-ray | 230 A | A | 26-445 | PDB |
| 2DPJ | X-ray | 230 A | A | 26-445 | PDB |
| 2FLL | X-ray | 260 A | A | 26-445 | PDB |
| 2FLN | X-ray | 250 A | A | 26-445 | PDB |
| 2FLP | X-ray | 240 A | A | 26-445 | PDB |
| 2KHU | NMR | - | A | 697-740 | PDB |
| 2KHW | NMR | - | A | 697-740 | PDB |
| 2KTF | NMR | - | B | 704-730 | PDB |
| 2L0F | NMR | - | B | 699-740 | PDB |
| 2L0G | NMR | - | A | 704-730 | PDB |
| 2MBB | NMR | - | A | 516-555 | PDB |
| 3EPG | X-ray | 250 A | A | 26-445 | PDB |
| 3EPI | X-ray | 290 A | A | 26-445 | PDB |
| 3G6V | X-ray | 220 A | A | 26-445 | PDB |
| 3G6X | X-ray | 208 A | A | 26-445 | PDB |
| 3G6Y | X-ray | 210 A | A | 26-445 | PDB |
| 3GV5 | X-ray | 200 A | B/D | 26-445 | PDB |
| 3GV7 | X-ray | 220 A | B | 26-445 | PDB |
| 3GV8 | X-ray | 200 A | B | 26-445 | PDB |
| 3H40 | X-ray | 230 A | A | 51-439 | PDB |
| 3H4B | X-ray | 285 A | A | 50-439 | PDB |
| 3H4D | X-ray | 220 A | A | 50-439 | PDB |
| 3NGD | X-ray | 280 A | A | 26-445 | PDB |
| 3OSN | X-ray | 190 A | A | 26-445 | PDB |
| 3Q8P | X-ray | 195 A | B | 26-445 | PDB |
| 3Q8Q | X-ray | 203 A | B | 26-445 | PDB |
| 3Q8R | X-ray | 245 A | B | 26-445 | PDB |
| 3Q8S | X-ray | 209 A | B | 26-445 | PDB |
| 4EBC | X-ray | 290 A | A | 26-445 | PDB |
| 4EBD | X-ray | 257 A | A | 26-445 | PDB |
| 4EBE | X-ray | 210 A | A | 26-445 | PDB |
| 4EYH | X-ray | 290 A | B | 26-445 | PDB |
| 4EYI | X-ray | 290 A | B | 26-445 | PDB |
| 4FS1 | X-ray | 250 A | A | 26-445 | PDB |
| 4FS2 | X-ray | 205 A | A | 26-445 | PDB |
| 5KT2 | X-ray | 249 A | A | 26-445 | PDB |
| 5KT3 | X-ray | 264 A | A | 26-445 | PDB |
| 5KT4 | X-ray | 278 A | A | 1-445 | PDB |
| 5KT5 | X-ray | 280 A | A | 1-445 | PDB |
| 5KT6 | X-ray | 354 A | A | 1-445 | PDB |
| 5KT7 | X-ray | 315 A | A | 1-445 | PDB |
| 5ULW | X-ray | 262 A | A | 26-445 | PDB |
| 5ULX | X-ray | 196 A | A | 26-445 | PDB |
| AF-Q9UNA4-F1 | Predicted | AlphaFoldDB |
656 variants for Q9UNA4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1452404711 CA402306915 |
3 | K>* | No |
ClinGen TOPMed |
|
|
rs1393988562 CA402306924 |
3 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1599141571 CA402306937 |
4 | L>R | No |
ClinGen Ensembl |
|
|
CA402306929 rs1161996566 |
4 | L>V | No |
ClinGen TOPMed |
|
|
CA8968113 rs750249590 |
6 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs767338968 CA8968112 |
6 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765506494 CA8968115 |
7 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402306967 rs765506494 |
7 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968114 rs755105790 |
7 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs907728575 CA300717724 |
8 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA8968117 rs752650771 |
8 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968116 rs752650771 |
8 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs907728575 CA402306980 |
8 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA402306992 rs768665084 |
9 | E>A | No |
ClinGen gnomAD |
|
|
rs376730732 CA8968118 |
9 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402306988 rs376730732 |
9 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA300717745 rs768665084 |
9 | E>V | No |
ClinGen gnomAD |
|
|
CA402307009 rs1568111929 |
10 | E>A | No |
ClinGen Ensembl |
|
|
CA402307002 rs1264671363 |
10 | E>K | No |
ClinGen TOPMed |
|
|
rs1274778408 CA402307036 |
11 | E>D | No |
ClinGen gnomAD |
|
|
CA300717749 rs371292557 |
11 | E>K | No |
ClinGen ESP gnomAD |
|
|
CA300717762 rs866048412 |
12 | G>E | No |
ClinGen Ensembl |
|
|
CA300717753 rs899800123 |
12 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs757874841 CA402307053 |
13 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757874841 CA8968120 |
13 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA300717786 rs998158002 |
14 | G>C | No |
ClinGen TOPMed |
|
|
CA402307062 rs998158002 |
14 | G>S | No |
ClinGen TOPMed |
|
|
CA300717800 rs78943519 |
15 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA402307123 rs1450257843 |
16 | D>E | No |
ClinGen TOPMed |
|
|
CA300717803 rs77607189 |
17 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA300717802 rs1049793809 |
17 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1049793809 CA402307125 |
17 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1197681887 CA402307148 |
18 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs775281944 CA8968126 |
19 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs1210255786 CA402307201 |
20 | D>E | No |
ClinGen TOPMed |
|
|
rs748735279 CA8968127 |
20 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402307210 rs1467338345 |
21 | A>S | No |
ClinGen gnomAD |
|
|
rs1301338376 CA402307218 |
21 | A>V | No |
ClinGen gnomAD |
|
|
CA300717824 rs1000306180 |
22 | E>Q | No |
ClinGen Ensembl |
|
|
rs761698213 CA8968130 |
23 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968131 rs202045769 |
25 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA402307281 rs202045769 |
25 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs760519303 CA8968133 |
26 | M>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760519303 CA402307293 |
26 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402307284 rs1331088015 |
26 | M>V | No |
ClinGen TOPMed |
|
|
rs1207528878 CA402307303 |
27 | E>K | No |
ClinGen gnomAD |
|
|
rs774616516 CA300717865 |
29 | A>E | No |
ClinGen TOPMed |
|
|
rs774616516 CA402307341 |
29 | A>V | No |
ClinGen TOPMed |
|
|
rs758380680 CA402307358 |
30 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1260907098 CA402307362 |
31 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1194337897 CA402307385 |
32 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA8968138 rs575201986 |
33 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402307412 rs1377353888 |
34 | A>T | No |
ClinGen gnomAD |
|
|
rs1466610116 CA402307417 |
34 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1359154544 CA402307450 |
36 | S>N | No |
ClinGen gnomAD |
|
|
rs1359154544 CA402307452 |
36 | S>T | No |
ClinGen gnomAD |
|
|
CA402307474 rs1299368253 |
37 | S>L | No |
ClinGen gnomAD |
|
|
rs200801352 CA300717889 |
37 | S>T | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1299368253 CA402307476 |
37 | S>W | No |
ClinGen gnomAD |
|
|
CA402307495 rs1208160103 |
38 | Q>H | No |
ClinGen TOPMed |
|
|
rs1217900690 CA402307504 |
39 | G>* | No |
ClinGen gnomAD |
|
|
rs1306643081 CA402307973 |
40 | V>I | No |
ClinGen gnomAD |
|
|
rs1352254116 CA402307994 |
41 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1240329008 CA402308050 |
45 | L>S | No |
ClinGen gnomAD |
|
|
rs766411249 CA8968150 |
49 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA402308115 rs770802279 |
50 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA8968151 rs760371141 |
50 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA8968152 rs770802279 |
50 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs776323717 CA8968153 |
51 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs1251536797 CA402308148 |
53 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA300719094 rs1049371193 |
54 | V>A | No |
ClinGen TOPMed |
|
|
rs945167625 CA300719099 |
55 | I>V | No |
ClinGen gnomAD |
|
|
rs1195671730 CA402308239 |
59 | D>N | No |
ClinGen gnomAD |
|
| TCGA novel | 60 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs763190230 CA8968155 |
63 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1179390640 CA402308333 |
64 | Y>C | No |
ClinGen gnomAD |
|
|
rs1410762204 CA402308346 |
65 | A>T | No |
ClinGen gnomAD |
|
|
CA8968156 rs764428002 |
66 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs139346720 CA8968160 |
70 | I>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139346720 CA8968159 |
70 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs750988856 CA300719140 |
71 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750988856 CA8968161 |
71 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968164 rs754176652 |
75 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs780423474 CA8968163 |
75 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA402308511 rs1376385648 |
76 | K>E | No |
ClinGen gnomAD |
|
|
CA300719178 rs906264722 |
77 | D>G | No |
ClinGen gnomAD |
|
| TCGA novel | 77 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1490486694 CA402308582 |
79 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1423301648 CA402308991 |
81 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA402308605 rs1323223129 |
81 | G>R | No |
ClinGen gnomAD |
|
|
CA402308995 rs1456294377 |
82 | V>I | No |
ClinGen TOPMed |
|
|
CA8968183 rs754164062 |
83 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968184 rs764852630 |
84 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA8968185 rs376609347 |
85 | K>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8968186 rs758080830 |
86 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746519196 CA8968188 |
91 | C>* | No |
ClinGen ExAC gnomAD |
|
|
CA300720830 rs914158600 |
92 | N>I | No |
ClinGen TOPMed |
|
|
rs781058486 CA8968190 |
93 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757155978 CA8968189 |
93 | Y>N | No |
ClinGen ExAC |
|
|
VAR_021239 CA8968191 rs3218778 |
96 | R>G | large decrease in catalytic activity efficiency which is partially rescued by the presence of Mn(2+) instead Mg(2+) [UniProt] | No |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
rs769761487 CA402309110 |
99 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769761487 CA8968192 |
99 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1350178824 CA402309121 |
101 | K>R | No |
ClinGen gnomAD |
|
|
rs774685817 CA8968194 |
102 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1263111581 CA402309133 |
103 | L>V | No |
ClinGen gnomAD |
|
|
rs200195344 CA8968196 |
104 | M>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1195839931 CA402309140 |
104 | M>L | No |
ClinGen gnomAD |
|
|
rs1039348465 CA402309142 |
104 | M>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1039348465 CA300720880 |
104 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs773284925 CA8968197 |
108 | D>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 108 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402309191 rs1157967866 |
111 | E>G | No |
ClinGen gnomAD |
|
|
CA402309189 rs1417324341 |
111 | E>Q | No |
ClinGen gnomAD |
|
|
rs1361152681 CA402309196 |
112 | K>E | No |
ClinGen gnomAD |
|
|
rs1402213666 CA402309201 |
112 | K>N | No |
ClinGen gnomAD |
|
|
CA402309195 rs1361152681 |
112 | K>Q | No |
ClinGen gnomAD |
|
|
rs1321388648 CA402309218 |
115 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1321388648 CA402309217 |
115 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
CA402309220 rs1379510260 |
115 | Q>P | No |
ClinGen TOPMed |
|
|
CA402309226 rs760675576 |
116 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA8968199 rs142974796 |
117 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs142974796 CA402309232 |
117 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs777058525 CA8968200 |
118 | L>* | No |
ClinGen ExAC gnomAD |
|
|
CA8968201 rs759868851 |
119 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA8968202 rs765626984 |
121 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968204 rs757990952 |
125 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968205 rs369815747 |
126 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs759745970 CA8968206 |
126 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA300720928 rs759745970 |
126 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs369815747 CA300720913 |
126 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA300720934 rs866636393 COSM2879881 |
127 | Y>C | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1568118621 CA402309303 |
129 | E>K | No |
ClinGen Ensembl |
|
|
CA402309315 rs1455248952 |
130 | M>I | No |
ClinGen gnomAD |
|
|
CA8968212 rs779943564 |
130 | M>K | No |
ClinGen ExAC gnomAD |
|
|
CA8968213 rs779943564 |
130 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs151128120 CA8968211 |
130 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8968214 rs772269604 |
132 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA8968215 rs773373846 |
133 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA300720991 rs878959231 |
135 | T>I | No |
ClinGen Ensembl |
|
| TCGA novel | 136 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1487952694 CA402309348 |
136 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA8968231 rs780144134 |
139 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402309494 rs139836620 |
140 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8968233 rs754783676 |
142 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs375226021 CA8968234 |
142 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8968235 rs554252419 |
143 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402309564 rs1190005791 |
147 | R>I | No |
ClinGen gnomAD |
|
|
CA402309577 rs1421127964 |
148 | L>R | No |
ClinGen gnomAD |
|
| TCGA novel | 149 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8968236 rs771213123 |
150 | F>V | No |
ClinGen ExAC gnomAD |
|
|
CA402309615 rs1436802335 |
152 | E>K | No |
ClinGen TOPMed |
|
|
CA402309651 rs1373913311 |
155 | V>M | No |
ClinGen gnomAD |
|
|
CA402309683 rs1463569629 |
158 | T>A | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 159 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1401625427 CA402309702 |
159 | E>G | No |
ClinGen gnomAD |
|
|
rs1415886254 CA402309717 |
160 | M>I | No |
ClinGen gnomAD |
|
|
CA300722930 rs878918641 |
161 | V>A | No |
ClinGen Ensembl |
|
|
CA300722937 rs143166193 |
164 | R>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA8968238 rs745954398 |
165 | L>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8968240 rs572459890 |
167 | Q>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs572459890 CA8968239 |
167 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8968242 rs146652056 |
168 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 172 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs140298800 CA8968245 COSM365721 |
175 | A>V | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA402309892 rs1568122709 |
177 | T>S | No |
ClinGen Ensembl |
|
|
rs749884527 CA8968247 |
178 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968248 rs142549889 |
179 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402309907 rs1191856274 |
179 | S>P | No |
ClinGen TOPMed |
|
|
rs1202898762 CA402309915 |
180 | G>R | No |
ClinGen TOPMed |
|
|
CA402309928 rs1341256741 |
181 | H>L | No |
ClinGen TOPMed |
|
|
rs753764414 CA8968250 |
181 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA8968251 rs150991803 |
184 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402309955 rs150991803 |
184 | N>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs778530301 CA8968252 |
184 | N>K | No |
ClinGen ExAC |
|
|
rs752557345 CA300723063 |
186 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA8968253 rs752557345 |
186 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1309065928 CA402297538 |
188 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs200895161 CA300694635 |
189 | N>K | No |
ClinGen 1000Genomes gnomAD |
|
|
rs750688194 CA8968274 |
190 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA300694640 rs960813456 |
191 | L>F | No |
ClinGen Ensembl |
|
|
CA8968275 rs756364130 |
192 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA8968276 rs140364196 |
193 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA402297581 rs1178271624 |
195 | H>Y | No |
ClinGen gnomAD |
|
|
rs367942007 CA8968279 |
196 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402297591 rs1599185141 |
196 | I>T | No |
ClinGen Ensembl |
|
|
rs1410871595 CA402297588 |
196 | I>V | No |
ClinGen gnomAD |
|
|
CA8968281 rs772609971 |
203 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
rs770728932 CA8968284 |
204 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968283 rs746619873 |
204 | I>S | No |
ClinGen ExAC gnomAD |
|
|
rs772968163 CA8968282 |
204 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs562481498 CA402297642 |
205 | A>P | No |
ClinGen TOPMed |
|
|
rs562481498 CA300694724 |
205 | A>T | No |
ClinGen TOPMed |
|
|
rs1468541359 CA402297657 |
207 | E>G | No |
ClinGen Ensembl |
|
|
CA8968285 rs775944642 |
208 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968287 rs370713519 |
209 | R>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
CA8968286 rs759154060 |
209 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs974334753 CA300694765 |
211 | A>V | No |
ClinGen gnomAD |
|
|
CA402297688 rs1293643395 |
212 | M>I | No |
ClinGen gnomAD |
|
|
rs775547733 CA300694776 CA8968289 |
212 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs775547733 CA8968288 |
212 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs763840371 CA8968291 |
214 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1437298734 CA402297728 |
218 | L>F | No |
ClinGen gnomAD |
|
|
CA8968293 rs756274348 |
219 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA402297740 rs1235070374 |
220 | G>C | No |
ClinGen gnomAD |
|
|
rs1176853377 CA402297741 |
220 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1176853377 CA402297743 |
220 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1599185754 CA402297751 |
221 | C>W | No |
ClinGen Ensembl |
|
|
rs766626634 CA8968294 |
222 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1476394018 CA402297756 |
222 | A>V | No |
ClinGen gnomAD |
|
|
rs753854966 CA8968295 |
223 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA300694824 rs1027813348 |
224 | V>L | No |
ClinGen TOPMed |
|
|
CA402297768 rs1418425683 |
225 | A>P | No |
ClinGen gnomAD |
|
|
CA8968296 rs755139734 |
226 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1217696003 CA402297781 |
227 | N>D | No |
ClinGen TOPMed |
|
| TCGA novel | 227 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8968297 rs200234897 |
228 | K>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs759003923 CA8968300 |
231 | A>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1357123491 CA402297869 |
234 | V>I | No |
ClinGen gnomAD |
|
| TCGA novel | 239 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8968303 rs747390462 |
240 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs747390462 CA402297949 |
240 | P>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs770704738 CA8968304 |
241 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs1345835090 CA402297983 |
242 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1345835090 CA402297985 |
242 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs138927242 CA8968308 |
243 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs138927242 CA8968307 |
243 | Q>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs138927242 CA402297999 |
243 | Q>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402298001 rs1486851739 |
243 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
CA402298003 rs1486851739 |
243 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs762831996 CA8968310 |
244 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968312 rs774067689 |
245 | V>D | No |
ClinGen ExAC gnomAD |
|
|
CA8968313 rs761661193 |
248 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs766493497 CA8968314 |
249 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766493497 CA402298085 |
249 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754135350 CA8968315 |
250 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402298131 rs1425163494 |
252 | Q>K | No |
ClinGen TOPMed |
|
|
rs1326825767 CA402298171 |
253 | H>P | No |
ClinGen gnomAD |
|
|
CA402298184 rs1431680825 |
253 | H>Q | No |
ClinGen gnomAD |
|
|
rs759498532 CA8968316 |
253 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs557847970 CA8968317 |
254 | L>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1337863525 CA402298209 |
255 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs200319776 CA8968318 |
256 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402298222 rs1406349469 |
256 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA300694977 rs943801892 |
260 | H>D | No |
ClinGen Ensembl |
|
|
rs76578033 CA8968322 |
261 | I>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
VAR_021240 CA8968324 rs3218784 |
261 | I>M | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA8968323 rs76578033 |
261 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA402298400 rs1322772352 |
264 | I>V | No |
ClinGen TOPMed |
|
|
rs1254269812 CA402299073 |
266 | G>V | No |
ClinGen gnomAD |
|
|
CA8968339 rs763185207 |
269 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA402299099 rs1465337366 |
269 | Y>D | No |
ClinGen TOPMed |
|
|
rs1378028261 CA402299121 |
270 | K>E | No |
ClinGen TOPMed |
|
|
CA402299163 rs1195377795 |
273 | K>E | No |
ClinGen TOPMed |
|
|
CA300696644 rs951926982 |
274 | C>Y | No |
ClinGen Ensembl |
|
| TCGA novel | 275 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402299212 rs1180994016 |
275 | L>R | No |
ClinGen gnomAD |
|
|
CA300696671 rs3218783 |
276 | E>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8968340 VAR_021241 rs3218783 |
276 | E>K | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs3218783 CA300696656 |
276 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA402299238 rs1161287517 |
277 | A>E | No |
ClinGen gnomAD |
|
|
rs752153501 CA8968341 |
277 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs757736389 CA8968342 |
279 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757736389 CA300696688 |
279 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1197007819 CA402299256 |
279 | G>R | No |
ClinGen gnomAD |
|
|
rs757736389 CA402299261 |
279 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs958218207 CA300696717 |
280 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
CA402299285 rs1396707520 |
281 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs369229520 CA300696723 |
282 | S>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA8968343 rs781575593 |
284 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs201346546 CA8968344 COSM473912 |
284 | R>H | kidney [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA8968345 rs200692792 |
285 | D>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA402299347 rs200692792 |
285 | D>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1334623440 CA402299377 |
286 | L>R | No |
ClinGen gnomAD |
|
|
rs143700892 CA8968349 |
289 | F>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA402299418 rs1336866899 |
289 | F>Y | No |
ClinGen gnomAD |
|
|
CA8968352 rs773001933 |
291 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA402299442 rs148150744 |
291 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8968351 rs148150744 |
291 | P>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1402580851 CA402299509 |
295 | E>* | No |
ClinGen TOPMed |
|
|
CA8968353 rs746783214 |
295 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA300696822 rs926230625 |
297 | E>G | No |
ClinGen gnomAD |
|
|
rs770049782 CA8968354 |
297 | E>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 297 | E>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402299573 rs1420353273 |
298 | L>* | No |
ClinGen gnomAD |
|
|
CA8968356 rs763095336 |
303 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968357 rs764229888 |
303 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA8968358 rs774599762 |
304 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA300696859 rs376585554 |
305 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968360 COSM3403564 rs146107490 |
305 | R>H | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs376585554 CA8968359 |
305 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756490660 CA8968362 |
307 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA402299695 rs1234706811 |
307 | Q>R | No |
ClinGen TOPMed |
|
|
rs1226281110 CA402299716 |
308 | K>N | No |
ClinGen gnomAD |
|
|
CA402299702 rs1324364295 |
308 | K>Q | No |
ClinGen gnomAD |
|
|
CA402299790 rs1599196082 |
311 | F>L | No |
ClinGen Ensembl |
|
|
rs765990947 CA8968364 |
313 | E>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 313 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA300696904 rs199780326 |
314 | D>G | No |
ClinGen 1000Genomes |
|
|
rs112212191 CA8968365 |
315 | N>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA402299886 rs1279608354 |
315 | N>K | No |
ClinGen gnomAD |
|
|
rs1442078526 CA402299902 |
317 | P>A | No |
ClinGen TOPMed |
|
|
rs754652473 CA8968366 |
317 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402299913 rs1189845602 |
318 | V>L | No |
ClinGen gnomAD |
|
|
rs747625032 CA8968368 |
319 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA300696952 rs1045906613 |
323 | P>S | No |
ClinGen gnomAD |
|
|
rs777636299 CA8968370 |
324 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA8968390 rs781076506 |
327 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs1236315095 CA402300583 |
328 | S>G | No |
ClinGen gnomAD |
|
|
rs1304867859 CA402300634 |
331 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs939067012 CA300697806 |
332 | S>* | No |
ClinGen TOPMed gnomAD |
|
|
CA300697819 rs769300610 |
333 | F>L | No |
ClinGen gnomAD |
|
|
CA402300674 rs1466392528 |
333 | F>S | No |
ClinGen gnomAD |
|
|
CA402300685 rs1212081170 |
334 | K>* | No |
ClinGen gnomAD |
|
|
rs1391632503 CA402300695 |
334 | K>N | No |
ClinGen TOPMed |
|
|
CA402300715 rs1490322557 |
335 | K>T | No |
ClinGen gnomAD |
|
|
rs1252391082 CA402300726 |
336 | C>R | No |
ClinGen gnomAD |
|
|
CA402300772 rs768997528 |
337 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768997528 CA8968392 |
337 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402300854 rs1200813312 |
341 | E>K | No |
ClinGen gnomAD |
|
|
CA300697843 rs887248370 |
343 | K>E | No |
ClinGen TOPMed |
|
|
rs371749193 CA8968394 |
345 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8968395 rs772081422 |
346 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1160233363 CA402301014 |
347 | E>* | No |
ClinGen gnomAD |
|
| TCGA novel | 347 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1459491242 CA402301054 |
350 | L>F | No |
ClinGen gnomAD |
|
|
CA8968396 rs773368468 |
350 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402301067 rs1175497006 |
351 | A>S | No |
ClinGen TOPMed |
|
|
rs1394569008 CA402301075 |
352 | S>G | No |
ClinGen gnomAD |
|
|
rs761117831 CA8968397 |
354 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA300697877 rs997380314 |
356 | R>K | No |
ClinGen Ensembl |
|
|
rs1184409411 CA402301419 |
357 | V>I | No |
ClinGen gnomAD |
|
|
rs1418092065 CA402301431 |
358 | C>* | No |
ClinGen gnomAD |
|
|
rs1002797739 CA402301440 |
359 | Q>H | No |
ClinGen TOPMed |
|
|
rs1428652339 CA402301445 |
360 | D>G | No |
ClinGen gnomAD |
|
|
CA402301449 rs1397898737 |
361 | G>R | No |
ClinGen gnomAD |
|
|
CA402301471 rs1373598018 |
364 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs777178383 CA8968418 |
365 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402301480 rs777178383 |
365 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1313207339 CA402301489 |
366 | T>I | No |
ClinGen gnomAD |
|
|
rs759870785 CA8968419 |
367 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA402301510 rs1450401131 |
370 | I>V | No |
ClinGen gnomAD |
|
|
rs770016097 CA8968420 |
371 | I>V | No |
ClinGen ExAC gnomAD |
|
|
COSM3378521 CA8968421 rs775948243 |
372 | R>C | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA300701364 rs950431386 COSM988965 |
372 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA300701389 rs969095032 COSM1564031 |
373 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs762455538 CA8968422 |
373 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968423 rs763812308 |
374 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs11558769 CA300701392 |
374 | Y>N | No |
ClinGen Ensembl |
|
|
rs375842301 CA8968424 |
377 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA300701417 rs995566528 |
378 | K>R | No |
ClinGen Ensembl |
|
|
CA402301562 rs1213192407 |
379 | H>D | No |
ClinGen TOPMed gnomAD |
|
|
rs750423750 CA402301567 |
379 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968426 rs767543790 |
379 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA402301563 rs1213192407 |
379 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs139074828 CA8968429 |
380 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756150056 CA8968428 |
380 | Y>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758482798 CA8968431 |
381 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA8968432 rs149914424 |
382 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs747076292 CA8968433 |
382 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402301589 rs35602237 |
383 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8968435 rs781282688 |
384 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs371876172 CA8968436 COSM1666295 |
385 | R>C | eye [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs923910739 CA300701495 |
385 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA300701503 rs376491192 |
386 | Q>R | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA8968437 rs192363974 |
389 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200852409 CA402301632 |
390 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8968438 rs200852409 |
390 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA402301631 rs1276020189 |
390 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8968439 rs749731969 |
391 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749731969 CA8968440 |
391 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774198773 CA402301644 |
392 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402301646 rs1465027468 |
393 | V>I | No |
ClinGen gnomAD |
|
|
rs1362406144 CA402301711 |
398 | G>E | No |
ClinGen TOPMed |
|
| TCGA novel | 400 | G>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 401 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402303030 rs1181006693 |
402 | Y>C | No |
ClinGen gnomAD |
|
|
CA300705601 rs1018644890 |
404 | V>M | No |
ClinGen TOPMed |
|
|
CA8968455 rs756576246 |
406 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968454 rs756576246 |
406 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200028845 CA8968456 |
407 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402303065 rs759284982 |
408 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs759284982 CA8968457 |
408 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs976356228 CA300705641 |
409 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs747751817 CA8968460 |
410 | D>E | No |
ClinGen ExAC |
|
|
rs556632345 CA8968459 |
410 | D>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402303089 rs1328851696 |
411 | I>M | No |
ClinGen gnomAD |
|
|
CA8968461 rs771859557 |
411 | I>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 411 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8968463 rs148677085 |
413 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8968462 rs772777726 |
413 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs56152401 COSM417818 CA8968466 |
417 | R>* | urinary_tract [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs113888456 CA402303127 |
417 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs113888456 CA8968467 |
417 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 419 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761958015 CA8968469 |
419 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142168361 CA8968468 |
419 | M>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8968471 rs750459725 |
422 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs756269299 CA8968472 |
423 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA402303175 rs780398295 CA8968473 |
424 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775072868 CA300705780 |
425 | P>Q | No |
ClinGen Ensembl |
|
|
rs1370260238 CA402303199 |
428 | L>V | No |
ClinGen gnomAD |
|
|
rs1371772039 CA402303212 |
430 | L>F | No |
ClinGen gnomAD |
|
|
rs748525170 CA8968477 |
431 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA402303227 rs1314502017 |
432 | S>R | No |
ClinGen gnomAD |
|
|
rs372676343 CA8968479 |
433 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs746476653 CA8968480 |
437 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1026444367 CA300705857 |
438 | L>F | No |
ClinGen Ensembl |
|
|
CA300705866 rs936190911 |
439 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA8968481 rs770514079 |
439 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1568141236 CA402303279 |
440 | A>G | No |
ClinGen Ensembl |
|
|
CA402303289 rs1279251949 |
442 | N>T | No |
ClinGen TOPMed gnomAD |
|
|
CA402303302 rs1483460342 |
444 | A>S | No |
ClinGen gnomAD |
|
|
CA300705872 rs376941412 |
445 | K>T | No |
ClinGen ESP gnomAD |
|
|
CA8968483 rs759460946 |
447 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs769727985 CA8968484 |
449 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968485 rs775262251 |
450 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs371538130 CA8968487 |
451 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402303347 rs1599237150 |
451 | Y>D | No |
ClinGen Ensembl |
|
|
rs767707112 CA8968489 CA8968488 |
454 | M>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 455 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA300705918 rs528723924 |
456 | S>L | No |
ClinGen Ensembl |
|
|
CA8968491 rs145324633 |
459 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs753873120 CA8968492 |
459 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA8968493 rs755467839 |
460 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1568141481 CA402303467 |
461 | S>T | No |
ClinGen Ensembl |
|
|
CA8968494 rs779627983 |
462 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201315797 CA8968495 |
462 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402303491 rs201315797 |
462 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8968498 rs746632668 |
463 | S>C | No |
ClinGen ExAC |
|
|
rs777260512 CA8968497 |
463 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA402303512 rs1235209162 |
464 | G>C | No |
ClinGen gnomAD |
|
|
rs1258766659 CA402303514 |
464 | G>D | No |
ClinGen gnomAD |
|
|
CA8968499 rs770503431 |
466 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA300705972 rs964434684 |
466 | H>Y | No |
ClinGen Ensembl |
|
|
rs1208352326 CA402303554 |
467 | S>G | No |
ClinGen gnomAD |
|
| TCGA novel | 467 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs780687003 CA8968500 |
468 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA8968522 rs755664692 |
470 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968523 rs200144217 |
472 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1280659440 CA402304617 |
472 | D>G | No |
ClinGen gnomAD |
|
|
CA8968524 rs749179224 |
473 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1201113809 CA402304637 |
474 | H>D | No |
ClinGen TOPMed |
|
|
VAR_021242 rs3730823 CA8968525 |
474 | H>R | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1250751388 CA402304737 |
478 | F>S | No |
ClinGen TOPMed |
|
|
rs1410250230 CA402304733 |
478 | F>V | No |
ClinGen gnomAD |
|
|
rs774125458 CA8968526 |
479 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA402304758 rs1231718314 |
480 | K>E | No |
ClinGen gnomAD |
|
|
CA402304762 rs1312010762 |
480 | K>T | No |
ClinGen gnomAD |
|
|
rs1322418458 CA402304773 |
481 | D>H | No |
ClinGen gnomAD |
|
|
CA8968528 rs771168096 |
483 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775065553 CA8968530 |
486 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201817534 CA8968529 |
486 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1206254522 CA402304840 |
487 | D>N | No |
ClinGen gnomAD |
|
|
CA402304975 rs1473985241 |
496 | S>G | No |
ClinGen gnomAD |
|
|
CA402304974 rs1473985241 |
496 | S>R | No |
ClinGen gnomAD |
|
|
rs1180938946 CA402304989 |
497 | T>A | No |
ClinGen gnomAD |
|
|
CA8968532 rs775732957 |
498 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968533 rs147885622 |
498 | R>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1410814505 CA402305018 COSM1162025 |
500 | R>K | kidney [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs1410814505 CA402305020 |
500 | R>T | No |
ClinGen TOPMed |
|
|
rs371061336 CA402305029 |
501 | E>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8968536 rs757611957 |
501 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs371061336 CA8968535 |
501 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371061336 CA8968534 |
501 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402305041 rs767170410 |
502 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968537 rs767170410 |
502 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1309578137 CA402305055 |
503 | P>Q | No |
ClinGen gnomAD |
|
|
rs750040594 CA8968538 |
504 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA402305082 rs1244399482 |
505 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA8968539 rs755789604 |
507 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs779484726 CA402305108 |
508 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779484726 CA8968540 |
508 | N>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA300707345 rs551675301 |
511 | K>E | No |
ClinGen 1000Genomes |
|
|
rs754935014 CA8968542 |
514 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA402305222 rs1476348755 |
515 | I>S | No |
ClinGen Ensembl |
|
|
COSM709351 rs778771682 CA8968543 |
515 | I>V | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA402305280 rs1277142233 |
519 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA300707418 rs996731969 |
520 | L>F | No |
ClinGen Ensembl |
|
|
CA8968548 rs375157241 |
523 | L>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA300707460 rs867445784 |
525 | E>* | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 526 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1389044611 CA402305447 |
528 | D>E | No |
ClinGen gnomAD |
|
|
CA402305478 rs1205664366 |
530 | E>Q | No |
ClinGen TOPMed |
|
|
CA8968549 rs770152829 |
531 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs55920515 CA300707488 |
532 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA8968550 rs3218786 VAR_021243 |
532 | F>S | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA402305545 rs1413762335 |
533 | K>E | No |
ClinGen gnomAD |
|
|
CA402305577 rs1599245296 |
534 | Q>L | No |
ClinGen Ensembl |
|
|
rs1333713430 CA402305591 |
535 | L>F | No |
ClinGen gnomAD |
|
|
CA8968552 rs769186379 |
536 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402305607 rs1267737699 |
536 | P>T | No |
ClinGen TOPMed |
|
|
CA402305677 rs762417531 |
539 | I>S | No |
ClinGen ExAC gnomAD |
|
|
rs762417531 CA8968554 |
539 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA8968553 rs774762752 |
539 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 541 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767728764 CA8968555 |
541 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA8968556 rs150441237 |
543 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8968557 rs200169886 |
544 | L>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200169886 CA300707521 |
544 | L>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8968558 rs138217642 |
544 | L>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8968559 rs753330863 |
545 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA402305897 rs754491770 |
547 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1177680 rs778876685 CA8968561 |
550 | E>G | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA8968562 rs546672290 |
552 | F>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 556 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA300707564 rs957130077 |
557 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA402306122 rs1414191197 |
559 | S>I | No |
ClinGen Ensembl |
|
|
CA8968566 rs149577277 |
560 | C>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs3218787 CA8968565 VAR_021244 |
560 | C>R | No |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
|
CA8968568 rs749358981 |
563 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs780473580 CA8968567 |
563 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402306194 rs768581665 |
565 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968569 rs768581665 |
565 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968572 rs567807681 |
568 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8968573 rs567807681 |
568 | V>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8968571 rs762173259 |
568 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA402306259 rs1323115199 |
570 | S>P | No |
ClinGen gnomAD |
|
|
rs761082777 CA8968574 |
571 | F>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1329804485 CA402306274 |
571 | F>L | No |
ClinGen gnomAD |
|
|
CA300707638 rs765990972 |
572 | F>C | No |
ClinGen ExAC gnomAD |
|
|
rs765990972 CA8968575 |
572 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA402306304 rs1216711247 |
574 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1448992246 CA402306310 |
574 | K>I | No |
ClinGen TOPMed |
|
|
rs1329698192 CA402306322 |
575 | K>E | No |
ClinGen gnomAD |
|
|
CA300707654 rs949661979 |
575 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
CA8968576 rs199674410 |
577 | M>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA300707655 rs1045269448 |
577 | M>V | No |
ClinGen Ensembl |
|
|
rs368135988 CA8968577 |
578 | Q>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8968579 rs752264918 |
579 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1450898711 CA402306401 |
580 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA402306406 rs1432374662 |
581 | P>S | No |
ClinGen TOPMed |
|
|
rs553872743 CA8968580 |
582 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA402306449 rs145116015 |
584 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8968581 rs145116015 |
584 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs539473192 CA8968582 |
586 | D>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1322545880 CA402306483 |
587 | H>P | No |
ClinGen TOPMed |
|
|
rs1180251868 CA402306510 |
589 | S>Y | No |
ClinGen gnomAD |
|
|
CA8968583 rs757159489 |
593 | Q>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 594 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA300707706 rs185500760 |
595 | S>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs185500760 CA8968584 |
595 | S>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs543509008 CA8968585 |
597 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402306631 rs1405229977 |
598 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA402306632 rs1405229977 |
598 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA8968588 rs200314275 |
602 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA402306702 rs1194737015 |
603 | G>A | No |
ClinGen gnomAD |
|
| TCGA novel | 606 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402306732 rs1599246684 |
606 | G>R | No |
ClinGen Ensembl |
|
|
CA8968591 rs773753364 |
610 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1476482723 CA402306804 |
611 | S>R | No |
ClinGen TOPMed |
|
| TCGA novel | 614 | Y>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402306841 rs1355113323 |
614 | Y>H | No |
ClinGen gnomAD |
|
|
rs1250670302 CA402306869 |
615 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA300707732 rs900963261 |
615 | M>R | No |
ClinGen TOPMed |
|
|
rs747340287 CA8968592 |
617 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968593 rs138942429 |
618 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs138562746 CA8968594 |
619 | K>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs764946326 CA8968596 |
623 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402307081 rs1473001896 |
624 | Y>C | No |
ClinGen gnomAD |
|
|
rs1364960881 CA402307115 |
626 | D>G | No |
ClinGen TOPMed |
|
|
CA300707794 rs1051886120 |
626 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1366782526 CA402307138 |
627 | N>S | No |
ClinGen gnomAD |
|
|
CA402307154 rs1245635181 |
628 | R>* | No |
ClinGen Ensembl |
|
|
rs774850561 CA8968597 |
629 | L>S | No |
ClinGen ExAC gnomAD |
|
|
CA8968598 rs762574854 |
631 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs768095430 CA8968599 |
633 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968600 rs751503957 |
633 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs543695647 CA8968601 |
634 | I>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs776066395 CA300707832 |
636 | Q>P | No |
ClinGen TOPMed |
|
|
rs1411267287 CA402307348 |
637 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA402307379 rs1331873030 |
638 | P>R | No |
ClinGen gnomAD |
|
| TCGA novel | 641 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1599247427 CA402307477 |
643 | G>E | No |
ClinGen Ensembl |
|
|
CA8968603 rs750240614 |
645 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1355058650 CA402307535 |
646 | F>L | No |
ClinGen TOPMed |
|
|
CA8968606 rs370262475 |
650 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs758510587 CA8968607 |
651 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs777858687 CA8968608 |
651 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs758510587 CA402307606 |
651 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA8968609 rs142279753 |
653 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs765088821 CA8968611 |
655 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968612 rs746310144 |
657 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA402307697 rs1432060494 |
658 | S>* | No |
ClinGen gnomAD |
|
|
CA8968614 rs146389760 |
660 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs763650760 CA8968616 |
661 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402307740 rs1335539818 |
661 | N>K | No |
ClinGen gnomAD |
|
|
rs1233962851 CA402307749 |
662 | L>S | No |
ClinGen TOPMed |
|
|
CA8968618 rs761779310 |
663 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1298324252 CA402307780 |
664 | S>I | No |
ClinGen gnomAD |
|
|
CA402307810 rs201355805 |
666 | Q>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1599247989 CA402307805 |
666 | Q>R | No |
ClinGen Ensembl |
|
|
CA8968620 rs750175746 |
668 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765342669 CA8968622 |
670 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1286167962 CA402307884 |
672 | H>R | No |
ClinGen TOPMed |
|
|
rs758640203 CA8968624 |
672 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs970842946 CA300707959 |
673 | T>P | No |
ClinGen Ensembl |
|
|
rs200521281 CA8968626 |
674 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402307897 rs1373831304 |
674 | T>I | No |
ClinGen TOPMed |
|
|
rs781747315 CA8968629 |
675 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1430833514 CA402307902 |
675 | D>G | No |
ClinGen gnomAD |
|
|
CA8968628 rs141627949 |
675 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs141627949 CA402307899 |
675 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8968630 rs746188285 |
676 | S>N | No |
ClinGen ExAC |
|
|
rs150497531 CA8968631 |
677 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402307935 rs1466178078 |
678 | K>E | No |
ClinGen gnomAD |
|
|
rs780306361 CA8968632 |
680 | T>I | No |
ClinGen ExAC TOPMed |
|
|
rs748894889 CA8968633 |
681 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs563332094 CA8968634 |
682 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1361058913 CA402308035 |
682 | A>V | No |
ClinGen Ensembl |
|
|
CA300707985 rs1035525205 |
683 | T>I | No |
ClinGen TOPMed |
|
|
CA8968635 rs773996646 |
684 | D>G | No |
ClinGen ExAC |
|
|
CA402308104 rs1472451848 |
686 | H>D | No |
ClinGen TOPMed |
|
|
CA8968636 rs761471262 |
686 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1324293306 CA402308134 |
687 | E>Q | No |
ClinGen gnomAD |
|
|
rs1300268767 CA402308209 |
690 | T>A | No |
ClinGen gnomAD |
|
|
CA402308219 rs1331528986 |
690 | T>R | No |
ClinGen TOPMed gnomAD |
|
|
CA402308230 rs1234234437 |
691 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA8968638 rs771877024 |
693 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402308288 rs771877024 |
693 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968640 rs760557350 |
695 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs766146034 CA402308392 |
697 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968641 rs766146034 |
697 | S>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA402308411 rs1317238067 |
698 | V>A | No |
ClinGen TOPMed |
|
|
rs1487099441 CA402308420 |
699 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1487099441 CA402308417 |
699 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA300708033 rs139520866 |
700 | E>D | No |
ClinGen ESP TOPMed |
|
| TCGA novel | 701 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8968642 rs753642196 |
703 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764646757 CA300708050 |
704 | F>S | No |
ClinGen Ensembl |
|
|
rs1201095629 CA402308547 |
705 | P>S | No |
ClinGen gnomAD |
|
|
rs531120033 CA8968644 |
707 | D>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1159204403 CA402308627 |
708 | I>T | No |
ClinGen gnomAD |
|
|
rs1408442073 CA402308644 |
709 | D>V | No |
ClinGen TOPMed |
|
|
rs1449988338 CA402308649 |
710 | P>S | No |
ClinGen TOPMed |
|
|
CA402308669 rs1292940953 |
712 | V>L | No |
ClinGen gnomAD |
|
|
rs141645046 CA8968646 |
713 | F>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8968647 rs781161881 |
714 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8968649 rs756594790 |
715 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374372131 CA8968650 |
717 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8968651 rs749741047 |
721 | Q>E | No |
ClinGen ExAC |
|
|
rs1289007023 CA402308803 |
722 | K>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 722 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1318870283 CA402308842 |
724 | L>R | No |
ClinGen gnomAD |
|
|
rs908170917 CA300708116 |
725 | L>P | No |
ClinGen TOPMed |
|
|
rs1259458781 CA402308861 |
726 | A>E | No |
ClinGen gnomAD |
|
|
rs778762382 CA8968653 |
728 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA402308903 rs1250101129 |
729 | K>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs528650008 CA8968654 |
729 | K>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA402308907 rs1482484628 |
730 | R>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA402308912 rs8305 |
731 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8968655 VAR_021245 rs8305 |
731 | A>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1409529544 CA402308916 |
732 | G>R | No |
ClinGen gnomAD |
|
|
rs772617646 CA8968656 |
736 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA300708147 rs901034435 |
736 | H>R | No |
ClinGen Ensembl |
|
|
rs770779391 CA8968658 |
737 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA402308984 rs1374794466 |
741 | K>Y | No |
ClinGen gnomAD |
No associated diseases with Q9UNA4
Functions
| Description | ||
|---|---|---|
| EC Number | 2.7.7.7 | Nucleotidyltransferases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasmic ribonucleoprotein granule | A ribonucleoprotein granule located in the cytoplasm. |
| nuclear speck | A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| damaged DNA binding | Binding to damaged DNA. |
| DNA-directed DNA polymerase activity | Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and a 3'hydroxyl group. |
| metal ion binding | Binding to a metal ion. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. |
| DNA replication | The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA. |
| error-prone translesion synthesis | The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across the lesion. This process does not remove the replication-blocking lesions and causes an increase in the endogenous mutation level. For example, in E. coli, a low fidelity DNA polymerase, pol V, copies lesions that block replication fork progress. This produces mutations specifically targeted to DNA template damage sites, but it can also produce mutations at undamaged sites. |
| translesion synthesis | The replication of damaged DNA by synthesis across a lesion in the template strand; a specialized DNA polymerase or replication complex inserts a defined nucleotide across from the lesion which allows DNA synthesis to continue beyond the lesion. This process can be mutagenic depending on the damaged nucleotide and the inserted nucleotide. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q8H2D5 | POLH | DNA polymerase eta | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEKLGVEPEE | EGGGDDDEED | AEAWAMELAD | VGAAASSQGV | HDQVLPTPNA | SSRVIVHVDL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DCFYAQVEMI | SNPELKDKPL | GVQQKYLVVT | CNYEARKLGV | KKLMNVRDAK | EKCPQLVLVN |
| 130 | 140 | 150 | 160 | 170 | 180 |
| GEDLTRYREM | SYKVTELLEE | FSPVVERLGF | DENFVDLTEM | VEKRLQQLQS | DELSAVTVSG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| HVYNNQSINL | LDVLHIRLLV | GSQIAAEMRE | AMYNQLGLTG | CAGVASNKLL | AKLVSGVFKP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| NQQTVLLPES | CQHLIHSLNH | IKEIPGIGYK | TAKCLEALGI | NSVRDLQTFS | PKILEKELGI |
| 310 | 320 | 330 | 340 | 350 | 360 |
| SVAQRIQKLS | FGEDNSPVIL | SGPPQSFSEE | DSFKKCSSEV | EAKNKIEELL | ASLLNRVCQD |
| 370 | 380 | 390 | 400 | 410 | 420 |
| GRKPHTVRLI | IRRYSSEKHY | GRESRQCPIP | SHVIQKLGTG | NYDVMTPMVD | ILMKLFRNMV |
| 430 | 440 | 450 | 460 | 470 | 480 |
| NVKMPFHLTL | LSVCFCNLKA | LNTAKKGLID | YYLMPSLSTT | SRSGKHSFKM | KDTHMEDFPK |
| 490 | 500 | 510 | 520 | 530 | 540 |
| DKETNRDFLP | SGRIESTRTR | ESPLDTTNFS | KEKDINEFPL | CSLPEGVDQE | VFKQLPVDIQ |
| 550 | 560 | 570 | 580 | 590 | 600 |
| EEILSGKSRE | KFQGKGSVSC | PLHASRGVLS | FFSKKQMQDI | PINPRDHLSS | SKQVSSVSPC |
| 610 | 620 | 630 | 640 | 650 | 660 |
| EPGTSGFNSS | SSSYMSSQKD | YSYYLDNRLK | DERISQGPKE | PQGFHFTNSN | PAVSAFHSFP |
| 670 | 680 | 690 | 700 | 710 | 720 |
| NLQSEQLFSR | NHTTDSHKQT | VATDSHEGLT | ENREPDSVDE | KITFPSDIDP | QVFYELPEAV |
| 730 | |||||
| QKELLAEWKR | AGSDFHIGHK |