Q9UJU2
Gene name |
LEF1 |
Protein name |
Lymphoid enhancer-binding factor 1 |
Names |
LEF-1, T cell-specific transcription factor 1-alpha, TCF1-alpha |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:51176 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9UJU2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9UJU2-F1 | Predicted | AlphaFoldDB |
276 variants for Q9UJU2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA035430 RCV000015459 rs267607214 |
45 | E>K | Sebaceous tumors, somatic Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP |
|
rs267607215 CA035634 RCV000015459 |
61 | S>P | Sebaceous tumors, somatic [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA3038123 rs757830628 |
2 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA357978460 rs1453658529 |
4 | L>V | No |
ClinGen gnomAD |
|
|
rs1161381377 CA357978452 |
5 | S>A | No |
ClinGen gnomAD |
|
|
rs1457980670 CA357978448 |
6 | G>R | No |
ClinGen gnomAD |
|
|
rs1042136043 CA103584951 |
7 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3038117 rs759797405 |
10 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA3038116 rs774434854 |
12 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769814612 CA3038111 |
14 | D>G | No |
ClinGen ExAC |
|
|
rs773206632 CA3038113 |
14 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA103584950 rs967933796 |
15 | P>L | No |
ClinGen TOPMed |
|
|
CA357978391 rs1209992384 |
16 | E>Q | No |
ClinGen gnomAD |
|
|
CA357978361 rs1329459182 |
20 | T>K | No |
ClinGen gnomAD |
|
|
CA3038109 rs776607345 |
23 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA103584949 rs987519271 |
23 | M>V | No |
ClinGen Ensembl |
|
|
rs201163073 CA357978327 |
25 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3038108 rs201163073 |
25 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs985349016 CA103584948 |
31 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs779512732 CA3038106 |
31 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs1264436196 CA357978269 |
33 | Q>R | No |
ClinGen TOPMed |
|
|
rs1435848098 CA357978244 |
36 | K>M | No |
ClinGen gnomAD |
|
|
CA357978240 rs1393797341 |
37 | I>V | No |
ClinGen gnomAD |
|
|
CA357978224 rs1235598508 |
39 | A>S | No |
ClinGen TOPMed |
|
|
CA3038103 COSM1049895 rs778363288 |
40 | E>D | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1427864631 CA357978204 |
42 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs756658779 CA3038102 |
42 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA357978203 rs1427864631 |
42 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3038101 rs201622857 |
44 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1189976183 CA357978187 |
44 | P>L | No |
ClinGen gnomAD |
|
|
rs781608580 CA3038100 |
45 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA103584947 rs267607214 |
45 | E>Q | No |
ClinGen TOPMed |
|
|
CA357978175 rs1404664164 |
46 | E>D | No |
ClinGen TOPMed |
|
| TCGA novel | 46 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 49 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA357978140 rs1415048582 |
51 | A>G | No |
ClinGen TOPMed |
|
|
CA357978104 rs1251819558 |
56 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA357978083 rs1394592922 |
59 | N>K | No |
ClinGen gnomAD |
|
|
rs1207767576 CA357978076 |
60 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1402160080 CA357978048 |
64 | I>M | No |
ClinGen gnomAD |
|
|
rs755324215 CA3038099 |
65 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1299152890 CA357978024 |
68 | N>S | No |
ClinGen TOPMed |
|
|
CA357978019 rs1227084249 |
69 | G>R | No |
ClinGen gnomAD |
|
|
CA3038097 rs547808066 |
70 | H>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs141061981 CA3038096 |
71 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA357977951 rs1281555729 |
73 | A>V | No |
ClinGen TOPMed |
|
|
CA3038056 rs757441044 |
75 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs998821805 CA103584675 |
79 | S>F | No |
ClinGen TOPMed |
|
|
CA3038055 rs753918551 |
80 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA3038054 rs764243792 |
80 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA357977904 rs1198332205 |
81 | E>Q | No |
ClinGen TOPMed |
|
|
rs61752607 CA357977874 |
85 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 85 | D>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs61752607 RCV000953715 CA3038052 |
85 | D>N | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA357977867 rs1191927030 |
86 | K>E | No |
ClinGen TOPMed |
|
|
CA3038050 rs759319967 |
87 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA3038051 rs767277376 |
87 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA3038048 rs765976937 |
89 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA3038047 rs762473612 |
90 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3038045 rs776698886 |
91 | P>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA103584674 rs776698886 |
91 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA3038046 rs772758213 |
91 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1007208937 CA103584673 |
92 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs762634018 CA3038029 |
94 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs200139061 CA3038042 |
94 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
COSM404622 rs150539494 CA3038028 |
95 | K>R | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA357977791 rs1222546909 |
96 | H>P | No |
ClinGen gnomAD |
|
|
CA357977788 rs1490466736 |
96 | H>Q | No |
ClinGen gnomAD |
|
|
CA357977779 rs1273634500 |
98 | D>H | No |
ClinGen gnomAD |
|
| TCGA novel | 99 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1196942311 CA357977762 |
100 | G>D | No |
ClinGen TOPMed |
|
|
CA3038025 rs775891624 |
101 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1030916424 CA103584554 |
101 | L>V | No |
ClinGen Ensembl |
|
|
CA103584553 rs1033894964 |
102 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs76996680 CA3038023 |
106 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs774892174 CA3038021 |
107 | S>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 107 | S>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3038019 rs749582963 |
108 | Y>C | No |
ClinGen ExAC |
|
|
CA357977716 rs1367264120 |
108 | Y>H | No |
ClinGen TOPMed |
|
|
CA357977714 rs749582963 |
108 | Y>S | No |
ClinGen ExAC |
|
|
rs777997623 CA3038018 |
109 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA103584550 rs889847505 |
111 | Y>F | No |
ClinGen TOPMed gnomAD |
|
|
VAR_035935 rs369649181 COSM32392 CA3038015 |
113 | G>R | large_intestine a colorectal cancer sample; somatic mutation [Cosmic, UniProt] | No |
ClinGen cosmic curated UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
rs1336332414 CA357977679 |
114 | Y>N | No |
ClinGen TOPMed |
|
|
rs754959962 CA3038014 |
115 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754959962 CA357977670 |
115 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA357977658 rs1472384927 |
116 | M>I | No |
ClinGen gnomAD |
|
|
CA357977661 rs1192053657 |
116 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3038013 rs751467556 |
117 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA357977654 rs1250817913 |
117 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA103584547 rs918846256 |
117 | M>T | No |
ClinGen Ensembl |
|
|
CA357977656 rs1250817913 |
117 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA3038011 rs758130054 |
123 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA103584545 rs944634194 |
124 | P>Q | No |
ClinGen TOPMed |
|
|
rs750080151 CA3038010 |
124 | P>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 124 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA357977584 rs1327981446 |
126 | M>I | No |
ClinGen gnomAD |
|
|
CA3038008 rs375600337 |
126 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 131 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs554465464 CA3038007 |
132 | S>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA357977545 rs1412024016 |
133 | P>A | No |
ClinGen gnomAD |
|
|
CA3038006 rs370283692 |
135 | I>L | No |
ClinGen ESP ExAC |
|
|
CA3038004 rs148458632 |
136 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs148458632 CA3038005 |
136 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1048060629 CA103584544 |
136 | P>T | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 137 | R>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1538862 rs769759622 COSM1538861 CA103584543 |
137 | R>K | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA3038001 rs201776417 |
138 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
COSM363987 CA3038002 rs201776417 |
138 | T>R | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC gnomAD |
|
CA357841006 rs1184099820 |
140 | N>K | No |
ClinGen gnomAD |
|
|
CA3037981 rs765488626 |
141 | K>E | No |
ClinGen ExAC |
|
|
CA3037979 rs200951346 |
144 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA102880689 rs200951346 |
144 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3037978 rs141850161 |
145 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs766355407 CA3037977 |
146 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA3037975 rs772045871 |
150 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs199515145 CA3037974 |
150 | A>V | Variant assessed as Somatic; 4.623e-05 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs978384163 CA102880688 |
151 | V>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA357840945 rs1578328414 |
151 | V>I | No |
ClinGen Ensembl |
|
|
CA357840928 rs1578328395 |
153 | P>R | No |
ClinGen Ensembl |
|
|
rs1578328387 CA357840916 |
155 | T>S | No |
ClinGen Ensembl |
|
|
CA357840910 rs1390221574 |
156 | P>H | No |
ClinGen gnomAD |
|
|
CA3037972 rs756986755 |
156 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA3037971 rs555674649 |
157 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs555674649 CA102880687 |
157 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 159 | T>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs755719300 CA3037969 |
160 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs141659676 CA357840871 |
162 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs138774973 CA3037966 |
163 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 164 | H>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA357840858 rs1387790447 |
164 | H>R | No |
ClinGen gnomAD |
|
|
CA3037965 rs138504619 |
168 | G>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA357840830 rs138504619 |
168 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs773360376 CA102880683 |
171 | P>A | No |
ClinGen Ensembl |
|
|
CA3037962 rs200236123 |
171 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 172 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1292949910 CA357840801 |
173 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3037960 rs760864275 |
174 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA357840788 rs1340584903 |
175 | P>L | No |
ClinGen gnomAD |
|
|
CA3037959 rs775583955 |
177 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA102880682 rs775583955 |
177 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142779919 CA3037957 |
178 | V>I | No |
ClinGen ESP ExAC TOPMed |
|
|
rs1380318110 CA357840764 |
179 | N>S | No |
ClinGen TOPMed |
|
|
rs1380318110 CA357840765 |
179 | N>T | No |
ClinGen TOPMed |
|
|
CA357840760 rs1330566265 |
180 | S>T | No |
ClinGen gnomAD |
|
| TCGA novel | 183 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1316672078 CA357840494 |
184 | M>I | No |
ClinGen TOPMed |
|
|
rs35620964 CA3037935 |
184 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1170913501 CA357840495 |
184 | M>R | No |
ClinGen gnomAD |
|
|
rs35620964 CA102879633 |
184 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 185 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs770727941 CA3037934 |
187 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA102879630 rs771652005 |
188 | P>L | No |
ClinGen Ensembl |
|
|
CA357840471 rs1429501592 |
188 | P>T | No |
ClinGen gnomAD |
|
|
CA3037932 rs773185032 |
190 | A>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 190 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3037931 rs769709054 |
192 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA3037930 rs747868289 |
193 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1442283587 CA357840425 |
195 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1442283587 CA357840426 |
195 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA357840397 rs1461963031 |
199 | L>F | No |
ClinGen gnomAD |
|
|
CA3037928 rs768217737 |
199 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs572389569 CA3037927 |
201 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA102879613 rs113508132 |
202 | G>A | No |
ClinGen gnomAD |
|
|
CA3037925 rs757744571 |
202 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs754337474 CA3037924 |
203 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1239693866 CA357840374 |
204 | V>F | No |
ClinGen gnomAD |
|
|
COSM1578590 COSM1578591 CA357840371 rs1261292608 |
204 | V>G | meninges [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA357840375 rs1239693866 |
204 | V>L | No |
ClinGen gnomAD |
|
|
rs1468699767 CA357840338 |
209 | P>Q | No |
ClinGen TOPMed |
|
|
COSM585199 rs1194536526 CA357840336 COSM1143464 |
210 | P>A | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1560777037 CA357840321 |
212 | G>A | No |
ClinGen Ensembl |
|
|
rs756499364 CA3037904 |
221 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756499364 CA357840062 |
221 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371920870 CA3037903 |
222 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA357840009 rs1432465560 |
224 | G>R | No |
ClinGen gnomAD |
|
|
CA357839916 rs1346549687 |
229 | Y>C | No |
ClinGen gnomAD |
|
|
CA3037901 rs755199598 |
231 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs561773931 CA3037900 |
232 | S>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3037896 rs377048071 |
236 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3037897 rs377048071 |
236 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1389645680 CA357839766 |
238 | S>F | No |
ClinGen gnomAD |
|
|
CA357839751 rs1242951072 |
239 | M>I | No |
ClinGen gnomAD |
|
|
CA3037894 rs368667634 |
239 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3037895 rs761818179 COSM732026 |
239 | M>V | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA357839738 rs1198395468 |
240 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1277064288 CA357839743 |
240 | S>P | No |
ClinGen gnomAD |
|
|
CA3037871 rs373162182 |
241 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 242 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1342376014 CA357839158 |
243 | S>P | No |
ClinGen gnomAD |
|
|
CA357839138 rs1578317288 |
244 | H>R | No |
ClinGen Ensembl |
|
|
rs767105917 CA3037870 |
245 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA357839130 rs1285614324 |
245 | H>Y | No |
ClinGen gnomAD |
|
|
rs201925329 CA3037869 |
246 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 248 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1594185 CA3037867 COSM200874 rs146861754 |
249 | G>S | large_intestine endometrium Variant assessed as Somatic; 4.62e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs748665571 CA3037866 |
252 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA357838963 rs1413007448 |
257 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1431667365 CA357838939 |
259 | P>S | No |
ClinGen gnomAD |
|
|
CA3037865 rs777138887 |
260 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs370901235 CA3037864 |
263 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA357838870 rs1410944927 |
265 | T>A | No |
ClinGen gnomAD |
|
|
CA357838866 rs1428072231 |
265 | T>I | No |
ClinGen gnomAD |
|
|
CA3037862 rs780448564 |
266 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA102878659 rs886264865 |
267 | Q>L | No |
ClinGen TOPMed |
|
| TCGA novel | 271 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs772461379 CA3037861 |
271 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3037859 rs779191660 |
272 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs746081744 CA3037860 |
272 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1328992248 CA357838816 |
273 | P>T | No |
ClinGen gnomAD |
|
|
rs757354968 CA3037858 |
274 | H>N | No |
ClinGen ExAC gnomAD |
|
|
CA357838799 rs1374631633 |
276 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
COSM370131 rs539588877 CA102878651 |
278 | D>E | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC gnomAD |
|
rs752588282 CA3037854 |
280 | M>R | No |
ClinGen ExAC gnomAD |
|
|
rs1456848062 CA357838747 |
281 | H>R | No |
ClinGen gnomAD |
|
|
rs1337710007 CA357838752 |
281 | H>Y | No |
ClinGen gnomAD |
|
|
rs113018313 CA102878643 |
282 | V>A | No |
ClinGen Ensembl |
|
|
rs151041212 CA3037852 |
282 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200172564 CA3037804 |
285 | Q>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
COSM1149837 CA3037803 rs760096679 |
286 | H>R | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1311779678 CA357838552 |
287 | E>G | No |
ClinGen gnomAD |
|
|
CA102878407 rs973209927 |
287 | E>K | No |
ClinGen Ensembl |
|
|
rs774894331 CA3037802 |
288 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA357838529 rs1578315412 |
289 | R>K | No |
ClinGen Ensembl |
|
|
CA357838514 rs1347141613 |
290 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA357838467 rs1190785094 |
293 | E>D | No |
ClinGen TOPMed |
|
|
rs551928999 CA3037800 |
293 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1194054389 CA357838461 |
294 | P>S | No |
ClinGen Ensembl |
|
|
rs532317726 CA3037799 |
295 | K>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 296 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA357838433 rs1299335713 |
296 | R>K | No |
ClinGen gnomAD |
|
|
rs769921446 CA357838430 |
296 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA357838417 rs1376752087 |
297 | P>L | No |
ClinGen gnomAD |
|
| TCGA novel | 310 | M>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA357838239 rs1182092286 |
313 | M>T | No |
ClinGen gnomAD |
|
|
CA3037797 rs139854140 |
315 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1196415627 CA357838190 |
316 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1418335558 CA357838197 |
316 | N>S | No |
ClinGen TOPMed |
|
|
CA102878387 rs753687592 |
316 | N>Y | No |
ClinGen Ensembl |
|
|
rs768632102 CA3037795 |
317 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs779954245 CA3037793 |
318 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA357838156 rs1283614120 |
319 | A>V | No |
ClinGen gnomAD |
|
|
CA357838084 rs1578315184 |
325 | E>A | No |
ClinGen Ensembl |
|
| TCGA novel | 326 | S>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 326 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 328 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 337 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3037771 rs770745649 |
338 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1445279707 CA357837410 |
339 | A>V | No |
ClinGen gnomAD |
|
|
CA357837374 rs1445133819 |
342 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs200011152 CA3037768 |
342 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1538865 rs200011152 COSM1538866 CA357837367 |
342 | R>L | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 344 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3037766 rs780385841 |
349 | Y>F | No |
ClinGen ExAC |
|
|
rs1269291681 CA357837203 |
353 | R>Q | No |
ClinGen gnomAD |
|
|
rs1359509909 COSM3380777 CA357837205 COSM3380778 COSM200871 |
353 | R>W | Variant assessed as Somatic; 0.0 impact. pancreas large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1032490478 CA102876531 |
355 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA357837118 rs1319328618 |
359 | H>R | No |
ClinGen gnomAD |
|
| TCGA novel | 364 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3037759 rs760702658 |
365 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1578304478 CA357836933 |
371 | N>S | No |
ClinGen Ensembl |
|
| TCGA novel | 372 | Y>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 376 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 377 | K>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs752759132 CA3037740 |
378 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs1201511307 CA357836206 |
381 | E>G | No |
ClinGen gnomAD |
|
|
CA3037738 rs759447310 |
384 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA3037737 rs774375045 |
385 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA357836178 rs774375045 |
385 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3037736 rs766282843 |
387 | A>S | No |
ClinGen ExAC TOPMed |
|
|
rs773021504 CA102875090 |
388 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773021504 CA3037734 |
388 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs149902954 CA102874931 |
389 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA3037713 rs776277632 |
391 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA357836102 rs1442205489 |
396 | A>T | No |
ClinGen gnomAD |
|
|
rs373961332 CA3037712 |
399 | I>V | No |
ClinGen ESP ExAC gnomAD |
No associated diseases with Q9UJU2
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| beta-catenin-TCF complex | A protein complex that contains beta-catenin and a member of the T-cell factor (TCF)/lymphoid enhancer binding factor (LEF) family of transcription factors. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| protein-DNA complex | A macromolecular complex containing both protein and DNA molecules. |
| transcription regulator complex | A protein complex that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription. |
20 GO annotations of molecular function
| Name | Definition |
|---|---|
| armadillo repeat domain binding | Binding to an armadillo repeat domain, an approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity protein armadillo. Arm-repeat proteins are involved in various processes, including intracellular signalling and cytoskeletal regulation. |
| beta-catenin binding | Binding to a catenin beta subunit. |
| C2H2 zinc finger domain binding | Binding to a C2H2-type zinc finger domain of a protein. The C2H2 zinc finger is the classical zinc finger domain, in which two conserved cysteines and histidines co-ordinate a zinc ion. |
| chromatin binding | Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. |
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| DNA binding, bending | The activity of binding selectively and non-covalently to and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence. |
| DNA-binding transcription activator activity, RNA polymerase II-specific | A DNA-binding transcription factor activity that activates or increases transcription of specific gene sets transcribed by RNA polymerase II. |
| DNA-binding transcription factor activity | A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. |
| DNA-binding transcription factor activity, RNA polymerase II-specific | A DNA-binding transcription factor activity that modulates the transcription of specific gene sets transcribed by RNA polymerase II. |
| DNA-binding transcription repressor activity, RNA polymerase II-specific | A DNA-binding transcription factor activity that represses or decreases the transcription of specific gene sets transcribed by RNA polymerase II. |
| gamma-catenin binding | Binding to catenin complex gamma subunit. |
| histone binding | Binding to a histone, any of a group of water-soluble proteins found in association with the DNA of eukaryotic or archaeal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in gene regulation and DNA replication. They may be chemically modified (methylated, acetlyated and others) to regulate gene transcription. |
| histone deacetylase binding | Binding to histone deacetylase. |
| nuclear estrogen receptor binding | Binding to a nuclear estrogen receptor. |
| RNA polymerase II cis-regulatory region sequence-specific DNA binding | Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II. |
| RNA polymerase II transcription regulatory region sequence-specific DNA binding | Binding to a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II. |
| sequence-specific DNA binding | Binding to DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
| sequence-specific double-stranded DNA binding | Binding to double-stranded DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA, e.g. promotor binding or rDNA binding. |
| transcription corepressor binding | Binding to a transcription corepressor, a protein involved in negative regulation of transcription via protein-protein interactions with transcription factors and other proteins that negatively regulate transcription. Transcription corepressors do not bind DNA directly, but rather mediate protein-protein interactions between repressing transcription factors and the basal transcription machinery. |
| transcription regulator inhibitor activity | A molecular function regulator that inhibits the activity of a transcription regulator via direct binding and/or post-translational modification. |
61 GO annotations of biological process
| Name | Definition |
|---|---|
| anatomical structure regression | The developmental process in which an anatomical stucture is destroyed as a part of its normal progression. |
| apoptotic process involved in blood vessel morphogenesis | Any apoptotic process that is involved in blood vessel morphogenesis. |
| B cell proliferation | The expansion of a B cell population by cell division. Follows B cell activation. |
| BMP signaling pathway | The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. |
| branching involved in blood vessel morphogenesis | The process of coordinated growth and sprouting of blood vessels giving rise to the organized vascular system. |
| canonical Wnt signaling pathway | The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes. |
| cell chemotaxis | The directed movement of a motile cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis). |
| cellular response to cytokine stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus. |
| cellular response to interleukin-4 | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-4 stimulus. |
| chorio-allantoic fusion | The cell-cell adhesion process in which the cells of the chorion fuse to the cells of the allantois. |
| dentate gyrus development | The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus. |
| embryonic limb morphogenesis | The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. A limb is an appendage of an animal used for locomotion or grasping. |
| epithelial cell apoptotic process | Any apoptotic process in an epithelial cell. |
| epithelial to mesenchymal transition | A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. |
| face morphogenesis | The process in which the anatomical structures of the face are generated and organized. The face is the ventral division of the head. |
| forebrain neuroblast division | The division of a neuroblast located in the forebrain. Neuroblast division gives rise to at least another neuroblast. |
| forebrain radial glial cell differentiation | The process in which neuroepithelial cells of the neural tube give rise to radial glial cells, specialized bipotential progenitors cells of the forebrain. Differentiation includes the processes involved in commitment of a cell to a specific fate. |
| formation of radial glial scaffolds | The formation of scaffolds from a radial glial cell. The scaffolds are used as a substrate for the radial migration of cells. |
| histone H3 acetylation | The modification of histone H3 by the addition of an acetyl group. |
| histone H3-K56 acetylation | The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 56 of the histone. |
| histone H4 acetylation | The modification of histone H4 by the addition of an acetyl group. |
| mammary gland development | The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk. Its development starts with the formation of the mammary line and ends as the mature gland cycles between nursing and weaning stages. |
| negative regulation of apoptotic process | Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process. |
| negative regulation of apoptotic process in bone marrow cell | Any process that stops, prevents, or reduces the frequency, rate or extent of the occurrence or rate of cell death by apoptotic process in the bone marrow. |
| negative regulation of cell-cell adhesion | Any process that stops, prevents or reduces the rate or extent of cell adhesion to another cell. |
| negative regulation of DNA binding | Any process that stops or reduces the frequency, rate or extent of DNA binding. DNA binding is any process in which a gene product interacts selectively with DNA (deoxyribonucleic acid). |
| negative regulation of DNA-templated transcription | Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |
| negative regulation of interleukin-13 production | Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-13 production. |
| negative regulation of interleukin-4 production | Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-4 production. |
| negative regulation of interleukin-5 production | Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-5 production. |
| negative regulation of striated muscle tissue development | Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle development. |
| neutrophil differentiation | The process in which a myeloid precursor cell acquires the specialized features of a neutrophil. |
| odontogenesis of dentin-containing tooth | The process whose specific outcome is the progression of a dentin-containing tooth over time, from its formation to the mature structure. A dentin-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and is composed mainly of dentin, a dense calcified substance, covered by a layer of enamel. |
| osteoblast differentiation | The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, a mesodermal or neural crest cell that gives rise to bone. |
| paraxial mesoderm formation | The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts. |
| positive regulation by host of viral transcription | Any process in which a host organism activates or increases the frequency, rate or extent of viral transcription, the synthesis of either RNA on a template of DNA or DNA on a template of RNA. |
| positive regulation of cell cycle process | Any process that increases the rate, frequency or extent of a cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. |
| positive regulation of cell differentiation | Any process that activates or increases the frequency, rate or extent of cell differentiation. |
| positive regulation of cell migration | Any process that activates or increases the frequency, rate or extent of cell migration. |
| positive regulation of cell population proliferation | Any process that activates or increases the rate or extent of cell proliferation. |
| positive regulation of cell proliferation in bone marrow | A process that activates or increases the frequency, rate or extent of cell proliferation in the bone marrow. |
| positive regulation of cell-cell adhesion | Any process that activates or increases the rate or extent of cell adhesion to another cell. |
| positive regulation of chondrocyte proliferation | Any process that increases the frequency, rate or extent of the multiplication or reproduction of chondrocytes by cell division, resulting in the expansion of their population. A chondrocyte is a polymorphic cell that forms cartilage. |
| positive regulation of DNA-templated transcription | Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription. |
| positive regulation of epithelial to mesenchymal transition | Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition is where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. |
| positive regulation of gamma-delta T cell differentiation | Any process that activates or increases the frequency, rate or extent of gamma-delta T cell differentiation. |
| positive regulation of gene expression | Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). |
| positive regulation of granulocyte differentiation | Any process that activates or increases the frequency, rate or extent of granulocyte differentiation. |
| positive regulation of transcription by RNA polymerase II | Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter. |
| positive regulation of Wnt signaling pathway | Any process that activates or increases the frequency, rate or extent of Wnt signal transduction. |
| regulation of neurogenesis | Any process that modulates the frequency, rate or extent of neurogenesis, the generation of cells in the nervous system. |
| regulation of transcription by RNA polymerase II | Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II. |
| secondary palate development | The biological process whose specific outcome is the progression of the secondary palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The secondary palate is the part of the palate formed from the fusion of the two palatine shelves, extensions of the maxillary prominences. |
| sensory perception of taste | The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells. This is a neurological process. |
| somitogenesis | The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo. |
| sprouting angiogenesis | The extension of new blood vessels from existing vessels into avascular tissues, this process includes the specialization of endothelial cells into leading tip and stalk cells, proliferation and migration of the endothelial cells and cell adhesion resulting in angiogenic sprout fusion or lumen formation. |
| T cell receptor V(D)J recombination | The process in which T cell receptor V, D, and J, or V and J gene segments, depending on the specific locus, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). |
| T-helper 1 cell differentiation | The process in which a relatively unspecialized T cell acquires the specialized features of a T-helper 1 (Th1) cell. A Th1 cell is a CD4-positive, alpha-beta T cell that has the phenotype T-bet-positive and produces interferon-gamma. |
| tongue development | The process whose specific outcome is the progression of the tongue over time, from its formation to the mature structure. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in many other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech. |
| trachea gland development | The progression of a trachea gland over time, from its formation to the mature structure. Trachea glands are found under the mucus of the trachea and secrete mucus, and agents that help protect the lung from injury and infection. |
| transcription by RNA polymerase II | The synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs). |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| G3X9C2 | Nccrp1 | F-box only protein 50 | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MPQLSGGGGG | GGGDPELCAT | DEMIPFKDEG | DPQKEKIFAE | ISHPEEEGDL | ADIKSSLVNE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SEIIPASNGH | EVARQAQTSQ | EPYHDKAREH | PDDGKHPDGG | LYNKGPSYSS | YSGYIMMPNM |
| 130 | 140 | 150 | 160 | 170 | 180 |
| NNDPYMSNGS | LSPPIPRTSN | KVPVVQPSHA | VHPLTPLITY | SDEHFSPGSH | PSHIPSDVNS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KQGMSRHPPA | PDIPTFYPLS | PGGVGQITPP | LGWQGQPVYP | ITGGFRQPYP | SSLSVDTSMS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| RFSHHMIPGP | PGPHTTGIPH | PAIVTPQVKQ | EHPHTDSDLM | HVKPQHEQRK | EQEPKRPHIK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| KPLNAFMLYM | KEMRANVVAE | CTLKESAAIN | QILGRRWHAL | SREEQAKYYE | LARKERQLHM |
| 370 | 380 | 390 | |||
| QLYPGWSARD | NYGKKKKRKR | EKLQESASGT | GPRMTAAYI |