Q9UJQ1
Gene name |
LAMP5 (C20orf103) |
Protein name |
Lysosome-associated membrane glycoprotein 5 |
Names |
Brain and dendritic cell-associated LAMP, Brain-associated LAMP-like protein, BAD-LAMP, Lysosome-associated membrane protein 5, LAMP-5 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:24141 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9UJQ1
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9UJQ1-F1 | Predicted | AlphaFoldDB |
283 variants for Q9UJQ1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA9761789 rs745390525 |
2 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780512894 CA9761788 |
2 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9761791 rs780064366 |
7 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs768566208 CA9761793 |
10 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1378773112 CA408217063 |
10 | S>N | No |
ClinGen TOPMed |
|
|
CA9761794 rs774344559 |
10 | S>R | No |
ClinGen ExAC |
|
|
rs2232259 CA9761796 VAR_014401 |
12 | D>G | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs747169778 CA9761795 |
12 | D>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 13 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA311300369 rs923917124 |
15 | R>G | No |
ClinGen TOPMed |
|
|
CA9761798 rs142852865 |
15 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs765279015 CA9761799 |
16 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA311300377 rs989365527 |
17 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA9761801 rs776030154 |
18 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1555890904 CA408217116 |
19 | M>I | No |
ClinGen Ensembl |
|
|
rs1482630555 CA408217111 |
19 | M>L | No |
ClinGen TOPMed |
|
|
CA9761804 rs146492415 |
20 | L>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375192273 CA9761803 |
20 | L>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA408217185 rs1243940347 |
25 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA408217178 rs1338590371 |
25 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1338590371 CA408217179 COSM1198525 |
25 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA408217186 rs1243940347 |
25 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs767821171 CA9761825 |
26 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9761826 rs750059774 |
27 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA9761827 rs760301818 |
28 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA408217224 rs1256955820 |
29 | A>T | No |
ClinGen gnomAD |
|
|
rs1163952317 CA408217263 |
32 | E>A | No |
ClinGen TOPMed |
|
|
CA408217308 rs1473806566 |
36 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1184540341 CA408217329 |
38 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA9761828 rs765856589 |
39 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765856589 CA9761829 |
39 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 40 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9761832 rs752728026 |
43 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 43 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779013828 CA9761831 |
43 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA408217386 rs1219819939 |
44 | E>Q | No |
ClinGen TOPMed |
|
|
rs188938901 CA9761833 |
45 | K>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA408217416 rs1470156970 |
46 | D>G | No |
ClinGen gnomAD |
|
|
CA9761834 rs777491312 |
46 | D>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs769925728 CA9761836 |
47 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746094624 CA9761835 |
47 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs780045082 CA9761837 |
48 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs915573750 CA408217436 |
48 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
rs915573750 CA311300628 |
48 | F>Y | No |
ClinGen TOPMed gnomAD |
|
|
COSM382217 CA408217453 rs1327688705 |
50 | V>L | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1327688705 CA408217456 |
50 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs749403731 CA9761839 |
51 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9761838 rs749403731 |
51 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 51 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9761840 rs774819206 |
52 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774819206 CA408217469 |
52 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408217481 rs1323752592 |
53 | N>H | No |
ClinGen gnomAD |
|
|
rs762267414 CA9761841 |
55 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA9761842 rs772481702 |
56 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA311300638 rs561706014 |
56 | T>M | No |
ClinGen 1000Genomes |
|
|
CA311300641 rs948624392 |
58 | L>F | No |
ClinGen Ensembl |
|
|
CA408217559 rs1478849518 |
60 | A>T | No |
ClinGen gnomAD |
|
|
CA9761844 rs760308599 |
67 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA9761845 rs766159136 |
68 | V>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 69 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9761846 rs753348807 |
69 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA311300654 rs1046082394 |
72 | V>M | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 74 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs764877550 CA9761848 |
77 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA9761849 rs752672884 |
78 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs752672884 CA9761850 |
78 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1297087079 CA408217745 |
79 | D>E | No |
ClinGen gnomAD |
|
|
rs539934985 CA311300664 |
79 | D>G | No |
ClinGen gnomAD |
|
|
CA408217740 rs1171815695 |
79 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA408217739 rs1171815695 |
79 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA408217741 rs1171815695 |
79 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
VAR_014402 CA311300893 rs2232263 |
81 | I>V | No |
ClinGen UniProt Ensembl dbSNP |
|
|
rs1380478007 CA408217784 |
84 | Q>* | No |
ClinGen gnomAD |
|
|
CA408217794 rs1375667972 |
85 | A>V | No |
ClinGen TOPMed |
|
|
CA408217805 rs1321183696 |
87 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA9761899 rs111470150 |
88 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408217812 rs141039910 |
88 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9761898 rs141039910 |
88 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA408217827 rs1207351466 |
90 | T>I | No |
ClinGen TOPMed |
|
|
CA9761901 rs774126242 |
91 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA9761902 rs761808367 |
91 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761808367 CA408217830 |
91 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 91 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA408217833 rs1172391510 |
92 | G>R | No |
ClinGen gnomAD |
|
|
CA9761904 rs750223029 |
92 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1043799708 CA311300919 |
93 | A>G | No |
ClinGen Ensembl |
|
|
CA9761906 rs765397994 |
93 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA408217840 rs1450888902 |
94 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA311300926 rs943507191 |
95 | V>A | No |
ClinGen TOPMed |
|
|
rs1282938172 CA408217869 |
98 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1282938172 CA408217867 |
98 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA9761908 rs758376086 |
100 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA408217891 rs1219263144 |
101 | H>P | No |
ClinGen gnomAD |
|
|
rs1363744729 CA408217897 |
102 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs777973130 CA408217900 |
102 | S>R | No |
ClinGen ExAC gnomAD |
|
|
VAR_014403 CA9761910 rs2232264 |
103 | Q>E | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs2232264 CA9761911 |
103 | Q>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9761912 rs781637924 |
103 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9761913 rs781637924 |
103 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA311300946 rs866710466 |
104 | S>L | No |
ClinGen Ensembl |
|
|
rs779553604 CA408217933 |
107 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA9761914 rs769524620 |
107 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs768048488 CA9761917 |
108 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs749010297 CA9761916 |
108 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1475469447 TCGA novel CA408217948 |
109 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen gnomAD NCI-TCGA |
|
rs773969469 CA9761918 |
110 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA408217949 rs1195162189 |
110 | W>G | No |
ClinGen gnomAD |
|
|
CA408217969 rs1603167523 |
111 | V>G | No |
ClinGen Ensembl |
|
|
CA9761920 rs772027641 |
112 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA9761919 rs200509210 |
112 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs772027641 CA408217977 |
112 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA9761921 rs772943023 |
113 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766236127 CA9761923 |
114 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA9761924 rs752855315 |
114 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1400719278 CA408218012 |
116 | A>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA408218007 rs1448951801 |
116 | A>T | No |
ClinGen TOPMed |
|
|
rs1400719278 CA408218015 |
116 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1300157566 CA408218018 |
117 | L>F | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 118 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA311300979 rs748276398 |
119 | M>I | No |
ClinGen TOPMed |
|
|
CA9761927 rs772339940 |
122 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA408218107 CA408218104 rs1350456295 |
123 | K>N | No |
ClinGen TOPMed |
|
|
rs751690343 CA9761929 |
123 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA9761928 rs751690343 |
123 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs1197693394 CA408218143 |
124 | E>* | No |
ClinGen gnomAD |
|
| TCGA novel | 124 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1246547158 CA408218159 |
125 | S>N | Variant assessed as Somatic; 4.624e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs531685123 CA408218163 |
125 | S>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA408218190 rs1334836634 |
127 | N>I | No |
ClinGen TOPMed gnomAD |
|
|
rs376266110 CA9761960 |
127 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA408218204 rs1285427766 |
128 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA9761961 rs770904140 |
128 | M>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 129 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1233133960 CA408218227 |
130 | K>N | No |
ClinGen TOPMed |
|
|
rs146768664 CA9761963 |
131 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs776246013 COSM226403 CA9761962 |
131 | G>R | NS [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1272062378 CA408218243 |
132 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1403872303 CA408218241 |
132 | P>S | No |
ClinGen gnomAD |
|
|
rs968003473 CA311301096 |
135 | T>A | No |
ClinGen TOPMed |
|
|
CA311301100 rs551482155 |
135 | T>I | No |
ClinGen 1000Genomes |
|
|
rs1173544016 CA408218276 |
136 | W>G | No |
ClinGen Ensembl |
|
|
rs1373700297 CA408218314 |
139 | S>R | No |
ClinGen TOPMed |
|
|
CA9761967 rs767693086 |
141 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA9761968 rs773439024 |
142 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs761022614 CA9761969 |
142 | Q>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs766941686 CA408218387 |
146 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA408218378 rs1266747130 |
146 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1266747130 CA408218380 |
146 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1434660029 CA408218403 |
148 | S>W | No |
ClinGen TOPMed |
|
| TCGA novel | 151 | T>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs755337994 CA9761972 |
151 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA9761973 rs765655602 |
152 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9761974 rs765655602 |
152 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1458514359 COSM1029385 CA408218461 |
154 | K>E | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs758056122 CA9761975 |
157 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA9761976 VAR_014404 rs2232266 |
158 | S>G | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs746557308 CA9761977 |
159 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9762006 rs779928986 |
160 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA9762007 rs749128930 |
161 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs370533918 CA9762008 |
162 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA408219017 rs1343541598 |
163 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA9762010 rs747261412 |
163 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA9762013 rs369320779 COSM1495115 |
166 | S>L | kidney [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA408219054 rs369320779 |
166 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1057286144 CA311301740 |
167 | H>L | No |
ClinGen TOPMed gnomAD |
|
|
CA408219063 rs1057286144 |
167 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs763284065 CA9762016 |
167 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1159178573 CA408219076 |
168 | H>L | No |
ClinGen gnomAD |
|
|
rs373923121 CA408219069 |
168 | H>N | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs373923121 CA311301743 |
168 | H>Y | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1361905727 CA408219086 |
169 | L>H | No |
ClinGen gnomAD |
|
|
rs551662654 CA9762019 COSM1495114 |
170 | S>F | kidney [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC gnomAD |
|
rs766994885 CA9762020 |
171 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA408219111 rs1037651469 |
172 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
CA408219112 rs1037651469 |
172 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1388118205 CA408219134 |
174 | T>A | No |
ClinGen gnomAD |
|
|
CA9762022 rs749906296 |
174 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA9762021 rs749906296 |
174 | T>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 174 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9762024 rs571568578 |
175 | P>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA408219152 rs140401099 |
176 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM279348 CA9762026 rs140401099 |
176 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs747195497 CA9762027 |
177 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 178 | K>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771059272 CA9762028 |
178 | K>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 179 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9762029 rs529073599 |
180 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA9762031 rs769907848 |
181 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs745966700 CA9762030 |
181 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1453503417 CA408219219 |
182 | C>R | No |
ClinGen gnomAD |
|
|
CA311301768 rs755370376 |
182 | C>Y | No |
ClinGen gnomAD |
|
|
rs367768327 CA9762033 |
185 | Q>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs367768327 CA9762032 |
185 | Q>R | No |
ClinGen ESP ExAC gnomAD |
|
|
CA9762034 rs371250828 |
186 | Q>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs1157782852 CA408219282 |
187 | T>S | No |
ClinGen gnomAD |
|
|
rs527594563 CA408219321 |
191 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs527594563 CA311301775 |
191 | A>T | No |
ClinGen Ensembl |
|
|
CA408219342 rs1369241796 |
193 | S>G | No |
ClinGen gnomAD |
|
|
CA408219353 rs772802166 |
193 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs772802166 CA9762038 |
193 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA408219359 rs1467903187 |
194 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs137866690 CA9762041 |
195 | P>L | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
rs137866690 CA9762040 |
195 | P>R | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
CA9762039 rs760241822 |
195 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs765012076 CA9762043 |
197 | K>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs202101525 CA9762044 COSM287178 |
198 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA9762047 rs746132396 |
201 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 202 | I>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9762048 rs756184676 |
202 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 203 | L>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1384450508 CA408219425 |
204 | S>P | No |
ClinGen Ensembl |
|
|
CA9762049 rs780169385 |
205 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1568943305 CA408219459 |
207 | H>P | No |
ClinGen Ensembl |
|
|
rs192318071 CA311301803 |
208 | I>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs192318071 CA9762052 |
208 | I>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs748485662 CA9762053 |
209 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753204090 CA9762054 |
210 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753204090 CA408219490 |
210 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9762055 rs772992841 |
211 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1467098335 CA408219528 |
213 | I>V | No |
ClinGen TOPMed |
|
|
rs760460582 CA9762056 |
214 | I>N | No |
ClinGen ExAC |
|
|
CA311301809 rs961885441 |
214 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA311301817 rs878909071 |
216 | D>A | No |
ClinGen Ensembl |
|
|
CA311301820 rs878909071 |
216 | D>G | No |
ClinGen Ensembl |
|
|
CA9762059 rs143065055 |
218 | V>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9762061 rs752726869 |
220 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA9762062 rs758094275 |
221 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 223 | H>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs763008784 CA9762079 |
223 | H>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 224 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA311288928 rs111239272 |
226 | P>L | No |
ClinGen Ensembl |
|
|
rs763822071 CA9762080 |
226 | P>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 226 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9762081 rs766696500 |
229 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA311288935 rs368961716 |
230 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9762083 rs766611504 |
230 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9762082 rs368961716 |
230 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs373205650 CA408218038 |
233 | L>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373205650 COSM3963840 CA9762084 |
233 | L>V | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA408218053 COSM724632 rs1179915173 |
234 | E>Q | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1482777783 CA408218080 |
235 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs377714830 CA9762085 |
236 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9762086 rs377714830 |
236 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs377714830 CA408218114 |
236 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9762089 rs758947661 |
237 | L>F | No |
ClinGen ExAC TOPMed |
|
|
CA9762090 rs373796071 |
238 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1172305579 CA408218125 |
238 | P>S | No |
ClinGen gnomAD |
|
|
rs1228157352 CA408218149 |
240 | I>T | No |
ClinGen TOPMed |
|
| TCGA novel | 241 | L>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 243 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs900617862 CA311289004 |
243 | L>P | No |
ClinGen Ensembl |
|
|
CA408218197 rs900617862 |
243 | L>R | No |
ClinGen Ensembl |
|
|
rs200039263 CA9762092 |
247 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1311139853 CA408218277 |
248 | V>A | No |
ClinGen TOPMed |
|
|
CA9762094 COSM258545 rs755490520 |
248 | V>I | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs769176682 CA9762095 |
249 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1368314464 CA408218312 |
250 | M>T | No |
ClinGen TOPMed |
|
|
rs1390196138 CA408218303 |
250 | M>V | No |
ClinGen gnomAD |
|
|
rs202200983 CA9762097 |
251 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs202200983 CA408218336 |
251 | V>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9762099 rs570664155 |
253 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761575388 COSM97924 CA9762101 |
254 | A>V | upper_aerodigestive_tract Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 258 | V>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759816132 CA9762104 COSM3770896 |
258 | V>I | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA408218498 rs1420415682 |
260 | H>N | No |
ClinGen gnomAD |
|
| TCGA novel | 260 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA408218506 rs1189791481 |
260 | H>R | No |
ClinGen TOPMed |
|
|
rs1433213422 CA408218536 |
264 | A>T | No |
ClinGen Ensembl |
|
|
rs758925669 CA9762107 |
267 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs752851981 CA9762106 |
267 | V>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 268 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA408218572 rs1251279039 |
269 | I>V | No |
ClinGen TOPMed |
|
|
CA408218584 rs1351422444 |
270 | P>T | No |
ClinGen gnomAD |
|
|
CA9762109 rs372920766 |
271 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs371063794 CA9762108 |
271 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs781664839 CA408218597 |
272 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA9762111 rs781664839 |
272 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA408218605 rs1603176730 |
273 | R>K | No |
ClinGen Ensembl |
|
|
CA9762113 rs375922757 |
278 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs575036265 CA9762114 |
279 | M>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA408218672 rs575036265 |
279 | M>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9762115 rs748852728 |
280 | G>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 281 | G>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
No associated diseases with Q9UJQ1
No regional properties for Q9UJQ1
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q9UJQ1 | |||
Functions
13 GO annotations of cellular component
| Name | Definition |
|---|---|
| anchoring junction | A cell junction that mechanically attaches a cell (and its cytoskeleton) to neighboring cells or to the extracellular matrix. |
| cytoplasmic vesicle membrane | The lipid bilayer surrounding a cytoplasmic vesicle. |
| dendrite membrane | The portion of the plasma membrane surrounding a dendrite. |
| early endosome membrane | The lipid bilayer surrounding an early endosome. |
| endoplasmic reticulum-Golgi intermediate compartment membrane | The lipid bilayer surrounding any of the compartments of the endoplasmic reticulum (ER)-Golgi intermediate compartment system. |
| endosome membrane | The lipid bilayer surrounding an endosome. |
| growth cone membrane | The portion of the plasma membrane surrounding a growth cone. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| late endosome membrane | The lipid bilayer surrounding a late endosome. |
| lysosomal membrane | The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| recycling endosome membrane | The lipid bilayer surrounding a recycling endosome. |
| synaptic vesicle membrane | The lipid bilayer surrounding a synaptic vesicle. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| establishment of protein localization to organelle | The directed movement of a protein to a specific location on or in an organelle. Encompasses establishment of localization in the membrane or lumen of a membrane-bounded organelle. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| A4FV27 | LAMP5 | Lysosome-associated membrane glycoprotein 5 | Bos taurus (Bovine) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDLQGRGVPS | IDRLRVLLML | FHTMAQIMAE | QEVENLSGLS | TNPEKDIFVV | RENGTTCLMA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EFAAKFIVPY | DVWASNYVDL | ITEQADIALT | RGAEVKGRCG | HSQSELQVFW | VDRAYALKML |
| 130 | 140 | 150 | 160 | 170 | 180 |
| FVKESHNMSK | GPEATWRLSK | VQFVYDSSEK | THFKDAVSAG | KHTANSHHLS | ALVTPAGKSY |
| 190 | 200 | 210 | 220 | 230 | 240 |
| ECQAQQTISL | ASSDPQKTVT | MILSAVHIQP | FDIISDFVFS | EEHKCPVDER | EQLEETLPLI |
| 250 | 260 | 270 | |||
| LGLILGLVIM | VTLAIYHVHH | KMTANQVQIP | RDRSQYKHMG |