A4FV27
Gene name |
LAMP5 |
Protein name |
Lysosome-associated membrane glycoprotein 5 |
Names |
Lysosome-associated membrane protein 5, LAMP-5 |
Species |
Bos taurus (Bovine) |
KEGG Pathway |
bta:513094 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for A4FV27
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-A4FV27-F1 | Predicted | AlphaFoldDB |
63 variants for A4FV27
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| rs469122147 | 8 | L>H | No | EVA | |
| rs432988076 | 9 | L>I | No | EVA | |
| rs109464374 | 11 | V>G | No | EVA | |
| rs451580386 | 12 | D>E | No | EVA | |
| rs433913439 | 16 | V>D | No | EVA | |
| rs473863821 | 19 | M>K | No | EVA | |
| rs465703914 | 29 | A>E | No | EVA | |
| rs455111526 | 30 | E>Q | No | EVA | |
| rs470410204 | 30 | E>V | No | EVA | |
| rs452747271 | 43 | P>H | No | EVA | |
| rs435384150 | 86 | D>V | No | EVA | |
| rs457127877 | 94 | E>D | No | EVA | |
| rs469267690 | 95 | V>G | No | EVA | |
| rs451302801 | 108 | V>G | No | EVA | |
| rs473020063 | 111 | V>G | No | EVA | |
| rs876389801 | 115 | Y>S | No | EVA | |
| rs476137968 | 116 | A>T | No | EVA | |
| rs456090671 | 125 | S>R | No | EVA | |
| rs471765105 | 126 | H>N | No | EVA | |
| rs210100051 | 129 | P>S | No | EVA | |
| rs454221754 | 132 | P>L | No | EVA | |
| rs443130779 | 136 | W>* | No | EVA | |
| rs461328584 | 139 | S>R | No | EVA | |
| rs476646797 | 141 | V>I | No | EVA | |
| rs443710789 | 151 | T>P | No | EVA | |
| rs459043941 | 155 | D>E | No | EVA | |
| rs470415111 | 168 | H>P | No | EVA | |
| rs437472062 | 169 | L>P | No | EVA | |
| rs464514960 | 174 | T>P | No | EVA | |
| rs453324080 | 175 | P>S | No | EVA | |
| rs1117237899 | 177 | G>R | No | EVA | |
| rs435718765 | 177 | G>V | No | EVA | |
| rs476235165 | 183 | Q>H | No | EVA | |
| rs443450369 | 186 | Q>R | No | EVA | |
| rs458685983 | 187 | T>P | No | EVA | |
| rs470365024 | 200 | T>P | No | EVA | |
| rs440791325 | 201 | M>L | No | EVA | |
| rs459389057 | 214 | I>L | No | EVA | |
| rs481165938 | 216 | D>N | No | EVA | |
| rs448199499 | 220 | S>R | No | EVA | |
| rs461082928 | 223 | H>Y | No | EVA | |
| rs476359941 | 227 | V>E | No | EVA | |
| rs458582702 | 228 | D>A | No | EVA | |
| rs477122092 | 228 | D>E | No | EVA | |
| rs443174240 | 228 | D>H | No | EVA | |
| rs440913549 | 231 | E>D | No | EVA | |
| rs459862081 | 232 | Q>E | No | EVA | |
| rs459862081 | 232 | Q>K | No | EVA | |
| rs481626909 | 233 | L>M | No | EVA | |
| rs482557159 | 234 | E>D | No | EVA | |
| rs470476506 | 234 | E>G | No | EVA | |
| rs448755989 | 234 | E>K | No | EVA | |
| rs445981866 | 249 | I>F | No | EVA | |
| rs434841122 | 254 | V>G | No | EVA | |
| rs453386427 | 256 | Y>S | No | EVA | |
| rs465750917 | 263 | T>P | No | EVA | |
| rs436147461 | 264 | A>P | No | EVA | |
| rs476298510 | 266 | Q>K | No | EVA | |
| rs443515237 | 267 | V>L | No | EVA | |
| rs451982938 | 268 | Q>H | No | EVA | |
| rs470622721 | 272 | D>A | No | EVA | |
| rs440854761 | 279 | M>R | No | EVA | |
| rs459452450 | 281 | G>Y | No | EVA |
No associated diseases with A4FV27
No regional properties for A4FV27
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for A4FV27 | |||
Functions
13 GO annotations of cellular component
| Name | Definition |
|---|---|
| anchoring junction | A cell junction that mechanically attaches a cell (and its cytoskeleton) to neighboring cells or to the extracellular matrix. |
| cytoplasmic vesicle membrane | The lipid bilayer surrounding a cytoplasmic vesicle. |
| dendrite membrane | The portion of the plasma membrane surrounding a dendrite. |
| early endosome membrane | The lipid bilayer surrounding an early endosome. |
| endoplasmic reticulum-Golgi intermediate compartment membrane | The lipid bilayer surrounding any of the compartments of the endoplasmic reticulum (ER)-Golgi intermediate compartment system. |
| endosome membrane | The lipid bilayer surrounding an endosome. |
| growth cone membrane | The portion of the plasma membrane surrounding a growth cone. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| late endosome membrane | The lipid bilayer surrounding a late endosome. |
| lysosomal membrane | The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| recycling endosome membrane | The lipid bilayer surrounding a recycling endosome. |
| synaptic vesicle membrane | The lipid bilayer surrounding a synaptic vesicle. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| establishment of protein localization to organelle | The directed movement of a protein to a specific location on or in an organelle. Encompasses establishment of localization in the membrane or lumen of a membrane-bounded organelle. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9UJQ1 | LAMP5 | Lysosome-associated membrane glycoprotein 5 | Homo sapiens (Human) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDLRRRALLG | VDGLRVLLML | FHTVTRIMAE | QEVENLSGLS | TNPEKDIFVV | RENGTTCLMA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EFAAKFIVPY | DVWASNYVDL | ITEQADISLT | RGAEVKGHCG | HDESELQVFW | VDRAYALKML |
| 130 | 140 | 150 | 160 | 170 | 180 |
| FLKESHNTPK | GPEATWKLSK | VQFVYDSSEK | THFKDAVSAG | KHTANSHHLS | ALVTPAGKSY |
| 190 | 200 | 210 | 220 | 230 | 240 |
| ECQAQQTISL | ASSDPQKTVT | MILSAVHIQP | FDIISDFVFS | EEHKCPVDER | EQLEETLPLI |
| 250 | 260 | 270 | |||
| LGLILGLVIV | VTLVIYHIHH | KMTANQVQIP | RDRSQYKHMG |