Q9SQU1
Gene name |
TULP9 (At3g06380, F24P17.15) |
Protein name |
Tubby-like F-box protein 9 |
Names |
AtTLP9 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT3G06380 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9SQU1
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9SQU1-F1 | Predicted | AlphaFoldDB |
32 variants for Q9SQU1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_3_1936397_G_A | 5 | S>N | No | 1000Genomes | |
| tmp_3_1936413_G_A | 10 | M>I | No | 1000Genomes | |
| ENSVATH05783129 | 15 | H>N | No | 1000Genomes | |
| ENSVATH05783129 | 15 | H>Y | No | 1000Genomes | |
| ENSVATH02118334 | 20 | A>D | No | 1000Genomes | |
| ENSVATH10523023 | 24 | T>I | No | 1000Genomes | |
| ENSVATH05783132 | 28 | S>A | No | 1000Genomes | |
| ENSVATH05783134 | 41 | L>I | No | 1000Genomes | |
| tmp_3_1936582_G_T | 67 | G>C | No | 1000Genomes | |
| tmp_3_1936617_G_T | 78 | E>D | No | 1000Genomes | |
| tmp_3_1936624_G_A | 81 | A>T | No | 1000Genomes | |
| ENSVATH10523082 | 98 | S>P | No | 1000Genomes | |
| ENSVATH05783150 | 102 | D>E | No | 1000Genomes | |
| ENSVATH05783152 | 116 | Q>H | No | 1000Genomes | |
| ENSVATH05783156 | 144 | A>V | No | 1000Genomes | |
| tmp_3_1937172_A_G | 151 | I>V | No | 1000Genomes | |
| ENSVATH13878290 | 165 | Y>C | No | 1000Genomes | |
| tmp_3_1937372_A_G | 193 | K>R | No | 1000Genomes | |
| tmp_3_1937378_G_A | 195 | R>H | No | 1000Genomes | |
| tmp_3_1937470_C_T | 226 | R>W | No | 1000Genomes | |
| ENSVATH13878292 | 242 | I>M | No | 1000Genomes | |
| ENSVATH05783161 | 261 | S>L | No | 1000Genomes | |
| ENSVATH13878293 | 263 | P>L | No | 1000Genomes | |
| ENSVATH00309265 | 264 | V>F | No | 1000Genomes | |
| ENSVATH05783162 | 268 | H>N | No | 1000Genomes | |
| tmp_3_1937709_A_G | 275 | N>S | No | 1000Genomes | |
| tmp_3_1937718_C_A | 278 | S>* | No | 1000Genomes | |
| ENSVATH00309266 | 281 | D>E | No | 1000Genomes | |
| ENSVATH05783163 | 281 | D>N | No | 1000Genomes | |
| ENSVATH00309268 | 336 | T>P | No | 1000Genomes | |
| tmp_3_1937975_C_T | 364 | Q>* | No | 1000Genomes | |
| tmp_3_1938012_G_T | 376 | R>I | No | 1000Genomes |
No associated diseases with Q9SQU1
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| transcription cis-regulatory region binding | Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| abscisic acid-activated signaling pathway | The series of molecular signals generated by the binding of the plant hormone abscisic acid (ABA) to a receptor, and ending with modulation of a cellular process, e.g. transcription. |
| protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
| regulation of DNA-templated transcription | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
| response to fungus | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus. |
8 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q5QM27 | TULP1 | Tubby-like F-box protein 1 | Oryza sativa subsp japonica (Rice) | PR |
| Q8LJA9 | TULP3 | Tubby-like F-box protein 3 | Oryza sativa subsp japonica (Rice) | PR |
| Q10LG8 | TULP6 | Tubby-like F-box protein 6 | Oryza sativa subsp japonica (Rice) | PR |
| Q68Y48 | TULP9 | Tubby-like F-box protein 9 | Oryza sativa subsp japonica (Rice) | PR |
| Q688Y7 | TULP10 | Tubby-like F-box protein 10 | Oryza sativa subsp japonica (Rice) | PR |
| Q6Z2G9 | TULP5 | Tubby-like F-box protein 5 | Oryza sativa subsp japonica (Rice) | PR |
| Q0WPY0 | TULP6 | Tubby-like F-box protein 6 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8VY21 | TULP3 | Tubby-like F-box protein 3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MTFRSLLQEM | RSRPHRVVHA | AASTANSSDP | FSWSELPEEL | LREILIRVET | VDGGDWPSRR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| NVVACAGVCR | SWRILTKEIV | AVPEFSSKLT | FPISLKQSGP | RDSLVQCFIK | RNRNTQSYHL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| YLGLTTSLTD | NGKFLLAASK | LKRATCTDYI | ISLRSDDISK | RSNAYLGRMR | SNFLGTKFTV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| FDGSQTGAAK | MQKSRSSNFI | KVSPRVPQGS | YPIAHISYEL | NVLGSRGPRR | MRCIMDTIPM |
| 250 | 260 | 270 | 280 | 290 | 300 |
| SIVESRGVVA | STSISSFSSR | SSPVFRSHSK | PLRSNSASCS | DSGNNLGDPP | LVLSNKAPRW |
| 310 | 320 | 330 | 340 | 350 | 360 |
| HEQLRCWCLN | FHGRVTVASV | KNFQLVAVSD | CEAGQTSERI | ILQFGKVGKD | MFTMDYGYPI |
| 370 | |||||
| SAFQAFAICL | SSFETRIACE |