Q8VY21
Gene name |
TULP3 (At2g47900, F17A22.29) |
Protein name |
Tubby-like F-box protein 3 |
Names |
AtTLP3 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT2G47900 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8VY21
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8VY21-F1 | Predicted | AlphaFoldDB |
16 variants for Q8VY21
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_2_19612748_T_G | 7 | I>L | No | 1000Genomes | |
| ENSVATH05737057 | 9 | D>N | No | 1000Genomes | |
| tmp_2_19612726_A_C | 14 | L>R | No | 1000Genomes | |
| tmp_2_19612706_C_T | 21 | G>R | No | 1000Genomes | |
| tmp_2_19612682_C_T | 29 | G>S | No | 1000Genomes | |
| tmp_2_19612636_A_C | 44 | V>G | No | 1000Genomes | |
| ENSVATH14625787 | 72 | D>G | No | 1000Genomes | |
| tmp_2_19612553_C_T | 72 | D>N | No | 1000Genomes | |
| ENSVATH05737053 | 99 | R>K | No | 1000Genomes | |
| ENSVATH05737052 | 103 | L>V | No | 1000Genomes | |
| ENSVATH05737051 | 107 | L>F | No | 1000Genomes | |
| tmp_2_19612298_T_C | 128 | M>V | No | 1000Genomes | |
| tmp_2_19612072_T_C | 173 | N>S | No | 1000Genomes | |
| tmp_2_19612070_A_T | 174 | C>S | No | 1000Genomes | |
| tmp_2_19611899_G_A | 205 | T>M | No | 1000Genomes | |
| tmp_2_19611536_G_A | 294 | S>L | No | 1000Genomes |
No associated diseases with Q8VY21
Functions
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| plastid | Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| regulation of DNA-templated transcription | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
8 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q5QM27 | TULP1 | Tubby-like F-box protein 1 | Oryza sativa subsp japonica (Rice) | PR |
| Q8LJA9 | TULP3 | Tubby-like F-box protein 3 | Oryza sativa subsp japonica (Rice) | PR |
| Q6Z2G9 | TULP5 | Tubby-like F-box protein 5 | Oryza sativa subsp japonica (Rice) | PR |
| Q68Y48 | TULP9 | Tubby-like F-box protein 9 | Oryza sativa subsp japonica (Rice) | PR |
| Q688Y7 | TULP10 | Tubby-like F-box protein 10 | Oryza sativa subsp japonica (Rice) | PR |
| Q10LG8 | TULP6 | Tubby-like F-box protein 6 | Oryza sativa subsp japonica (Rice) | PR |
| Q0WPY0 | TULP6 | Tubby-like F-box protein 6 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SQU1 | TULP9 | Tubby-like F-box protein 9 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSFKSLIQDM | RGELGSISRK | GFDVRFGYGR | SRSQRVVQDT | SVPVDAFKQS | CWASMPPELL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RDVLMRIEQS | EDTWPSRKNV | VSCAGVCRNW | REIVKEIVRV | PELSSKLTFP | ISLKQPGPRG |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SLVQCYIMRN | RSNQTYYLYL | GLNQAASNDD | GKFLLAAKRF | RRPTCTDYII | SLNCDDVSRG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SNTYIGKLRS | NFLGTKFTVY | DAQPTNPGTQ | VTRTRSSRLL | SLKQVSPRIP | SGNYPVAHIS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| YELNVLGSRG | PRRMQCVMDA | IPASAVEPGG | TAPTQTELVH | SNLDSFPSFS | FFRSKSIRAE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| SLPSGPSSAA | QKEGLLVLKN | KAPRWHEQLQ | CWCLNFNGRV | TVASVKNFQL | VAAPENGPAG |
| 370 | 380 | 390 | 400 | ||
| PEHENVILQF | GKVGKDVFTM | DYQYPISAFQ | AFTICLSSFD | TKIACE |