Q9SNE1
Gene name |
ERF011 (At3g50260, F11C1.100) |
Protein name |
Ethylene-responsive transcription factor ERF011 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT3G50260 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9SNE1
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9SNE1-F1 | Predicted | AlphaFoldDB |
18 variants for Q9SNE1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_3_18634717_G_A | 11 | V>M | No | 1000Genomes | |
| tmp_3_18634720_G_A | 12 | A>T | No | 1000Genomes | |
| ENSVATH12681848 | 14 | K>T | No | 1000Genomes | |
| tmp_3_18634731_G_A | 15 | M>I | No | 1000Genomes | |
| tmp_3_18634759_A_T | 25 | R>* | No | 1000Genomes | |
| tmp_3_18634772_G_C | 29 | W>S | No | 1000Genomes | |
| ENSVATH12681849 | 31 | K>I | No | 1000Genomes | |
| tmp_3_18634916_C_G | 77 | P>R | No | 1000Genomes | |
| tmp_3_18634920_G_T | 78 | E>D | No | 1000Genomes | |
| ENSVATH06285406 | 81 | P>S | No | 1000Genomes | |
| ENSVATH06285407 | 85 | A>V | No | 1000Genomes | |
| ENSVATH06285408 | 87 | D>E | No | 1000Genomes | |
| tmp_3_18634984_G_A | 100 | V>M | No | 1000Genomes | |
| ENSVATH06285409 | 109 | A>T | No | 1000Genomes | |
| ENSVATH12681875 | 116 | K>I | No | 1000Genomes | |
| ENSVATH06285411 | 131 | L>F | No | 1000Genomes | |
| ENSVATH00412444 | 144 | E>* | No | 1000Genomes | |
| ENSVATH06285413 | 152 | G>E | No | 1000Genomes |
No associated diseases with Q9SNE1
1 regional properties for Q9SNE1
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Shelterin complex subunit TPP1/Est3 | 21 - 140 | IPR019437 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA-binding transcription factor activity | A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. |
| transcription cis-regulatory region binding | Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon. |
5 GO annotations of biological process
| Name | Definition |
|---|---|
| defense response to bacterium | Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism. |
| ethylene-activated signaling pathway | The series of molecular signals generated by the reception of ethylene (ethene, C2H4) by a receptor and ending with modulation of a cellular process, e.g. transcription. |
| regulation of cell death | Any process that modulates the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death. |
| response to bacterium | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium. |
| response to cold | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism. |
3 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| O22174 | ERF008 | Ethylene-responsive transcription factor ERF008 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FH94 | ERF010 | Ethylene-responsive transcription factor ERF010 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SW63 | RAP2-10 | Ethylene-responsive transcription factor RAP2-10 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDAGVAVKAD | VAVKMKRERP | FKGIRMRKWG | KWVAEIREPN | KRSRLWLGSY | STPEAAARAY |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DTAVFYLRGP | TATLNFPELL | PCTSAEDMSA | ATIRKKATEV | GAQVDAIGAT | VVQNNKRRRV |
| 130 | 140 | 150 | |||
| FSQKRDFGGG | LLELVDLNKL | PDPENLDDDL | VGK |