Q9NYP3
Gene name |
DONSON (C21orf60) |
Protein name |
Protein downstream neighbor of Son |
Names |
B17 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:29980 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9NYP3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9NYP3-F1 | Predicted | AlphaFoldDB |
468 variants for Q9NYP3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA10010677 RCV001856993 RCV000626267 RCV000496974 RCV002470886 RCV000623846 VAR_079330 rs768071555 |
28 | S>R | Microcephaly, short stature, and limb abnormalities Microcephaly-micromelia syndrome Inborn genetic diseases no effect on nuclear localization; complements loss of endogenous DONSON by rescuing the spontaneous fork stalling observed after DONSON depletion [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs2086558638 RCV001330760 |
214 | F>L | Microcephaly, short stature, and limb abnormalities [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001310228 CA320121693 RCV001527377 rs1028163227 |
224 | P>S | Meier-Gorlin syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA10010533 RCV000578432 rs777061964 |
228 | W>* | Microcephaly, short stature, and limb abnormalities [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA10010494 RCV001527360 RCV001310229 rs367904759 |
270 | Y>C | Meier-Gorlin syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
| VAR_079331 | 278 | C>R | MISSLA [UniProt] | Yes | UniProt |
|
TCGA novel VAR_079332 |
282 | Y>C | Variant assessed as Somatic; impact. MISSLA; loss of nuclear localization [NCI-TCGA, UniProt] | Yes |
NCI-TCGA UniProt |
|
CA10010485 RCV000496973 rs779803447 VAR_079333 |
292 | F>L | Microcephaly, short stature, and limb abnormalities MISSLA; loss of nuclear localization [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
| VAR_079334 | 293 | R>del | MISSLA [UniProt] | Yes | UniProt |
|
RCV002546747 CA10010475 RCV001335839 rs146301000 |
307 | I>V | Microcephaly, short stature, and limb abnormalities [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000496969 rs1135401961 |
417 | N>missing | Microcephaly, short stature, and limb abnormalities [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_079335 | 417 | N>del | MISSLA; reduced nuclear localization [UniProt] | Yes | UniProt |
|
RCV000624778 RCV002226718 RCV002532841 rs765112107 |
419 | K>* | Microcephaly, short stature, and limb abnormalities Inborn genetic diseases [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_079336 | 419 | K>del | MISSLA [UniProt] | Yes | UniProt |
|
RCV001839008 rs993687029 RCV002524063 CA320118898 RCV000496972 |
428 | Q>* | Microcephaly, short stature, and limb abnormalities Microcephaly-micromelia syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
| VAR_079337 | 428 | Q>del | MISSLA [UniProt] | Yes | UniProt |
| VAR_079338 | 433 | P>S | MISSLA [UniProt] | Yes | UniProt |
|
rs1135401959 CA410133136 RCV000496967 VAR_079339 |
446 | M>T | Microcephaly, short stature, and limb abnormalities MISSLA; reduced protein level; reduced nuclear localization [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
VAR_079340 CA10010308 RCV000623226 RCV000578322 RCV000496974 rs146664036 RCV001263376 RCV000880181 RCV000660883 RCV001420293 |
489 | K>T | Intellectual disability Microcephaly, short stature, and limb abnormalities Microcephaly-micromelia syndrome Inborn genetic diseases MISSLA; unknown pathological significance; reduced protein level; no effect on nuclear localization; does not complement loss of endogenous DONSON when tested for the rescue of the spontaneous fork stalling observed after DONSON depletion [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_079341 rs374688527 CA10010301 |
504 | E>K | MISSLA [UniProt] | Yes |
ClinGen UniProt ESP ExAC TOPMed dbSNP gnomAD |
| VAR_079342 | 543 | Q>QK | MISSLA; reduced nuclear localization [UniProt] | Yes | UniProt |
| VAR_079343 | 563 | N>del | MISSLA; unknown pathological significance [UniProt] | Yes | UniProt |
|
CA410146122 rs1446661011 |
2 | A>S | No |
ClinGen TOPMed |
|
|
CA320125095 rs968089348 |
3 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA410146079 rs1470564008 |
4 | S>W | No |
ClinGen TOPMed |
|
|
rs1021454698 CA320125094 |
5 | V>E | No |
ClinGen TOPMed |
|
|
rs1454189404 CA410145896 |
10 | P>S | No |
ClinGen TOPMed |
|
|
CA410145885 rs1334611372 |
11 | G>S | No |
ClinGen TOPMed |
|
|
rs1239176662 CA410145873 |
12 | F>L | No |
ClinGen TOPMed |
|
|
CA320125070 rs974873694 |
14 | K>R | No |
ClinGen Ensembl |
|
|
rs1280828026 CA410145805 |
15 | P>L | No |
ClinGen TOPMed |
|
| TCGA novel | 16 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs964516394 CA410145794 |
17 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
rs867683188 CA320125058 |
17 | E>D | No |
ClinGen Ensembl |
|
|
rs964516394 CA320125064 |
17 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA320125044 rs1031604453 |
18 | V>I | No |
ClinGen TOPMed |
|
|
rs1277027944 CA410145750 |
19 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1462944182 CA410145742 |
20 | R>Q | No |
ClinGen TOPMed |
|
|
CA410145743 rs1427574206 |
20 | R>W | No |
ClinGen gnomAD |
|
|
rs11553354 CA320125040 |
23 | R>Q | No |
ClinGen Ensembl |
|
|
CA10010678 rs753040226 |
24 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1202690599 CA410145667 |
25 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1202690599 CA410145663 |
25 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1003172836 CA320125031 |
26 | A>S | No |
ClinGen TOPMed |
|
|
CA410145595 rs1273970185 |
28 | S>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1011061844 CA320125026 |
29 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1480721206 CA410145555 |
29 | R>H | No |
ClinGen gnomAD |
|
|
CA320125007 rs1031175520 |
32 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA320125020 rs1031175520 |
32 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA320124995 rs999742539 |
33 | A>T | No |
ClinGen Ensembl |
|
|
CA320124983 rs906499854 |
33 | A>V | No |
ClinGen Ensembl |
|
|
rs1330298466 CA410145444 |
35 | P>R | No |
ClinGen TOPMed |
|
|
CA410145412 rs1339641254 |
37 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA410145405 rs1284506242 |
38 | E>K | No |
ClinGen TOPMed |
|
|
CA410145339 rs1332006642 |
40 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1601320290 CA410145292 |
42 | P>Q | No |
ClinGen Ensembl |
|
|
CA320124965 rs895261517 |
43 | A>E | No |
ClinGen Ensembl |
|
|
rs1197845139 CA410145250 |
45 | R>C | No |
ClinGen TOPMed |
|
|
rs1197845139 CA410145252 |
45 | R>S | No |
ClinGen TOPMed |
|
|
rs1376030090 CA410145245 |
46 | R>* | No |
ClinGen gnomAD |
|
|
CA410145234 rs1167367249 |
46 | R>P | No |
ClinGen gnomAD |
|
|
CA10010674 rs764817198 |
47 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs929463171 CA320124949 |
49 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1490211509 CA410145082 |
54 | P>S | No |
ClinGen TOPMed |
|
|
rs761178168 CA10010673 |
57 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1168128657 CA410144921 |
59 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA410144927 rs1269558792 |
59 | P>S | No |
ClinGen TOPMed |
|
|
rs1309167225 CA410144913 |
60 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1309167225 CA410144915 |
60 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA410144874 rs1462178226 |
62 | G>R | No |
ClinGen TOPMed |
|
|
CA410144853 rs1224398932 |
63 | G>C | No |
ClinGen gnomAD |
|
|
CA410144850 rs1372782276 |
63 | G>D | No |
ClinGen gnomAD |
|
|
CA410144822 rs1363107671 |
64 | R>S | No |
ClinGen TOPMed |
|
|
CA410144796 rs1277970349 |
66 | G>C | No |
ClinGen gnomAD |
|
|
CA410144801 rs1277970349 |
66 | G>S | No |
ClinGen gnomAD |
|
|
rs1601320207 CA410144766 |
68 | S>G | No |
ClinGen Ensembl |
|
|
CA410144724 rs1295298789 |
70 | G>S | No |
ClinGen TOPMed |
|
|
CA410144693 rs1229814550 |
71 | G>D | No |
ClinGen TOPMed |
|
|
rs1348061687 CA410144667 |
72 | P>L | No |
ClinGen gnomAD |
|
|
CA410144640 rs1161274284 |
75 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA320124916 rs1055767568 |
78 | N>D | No |
ClinGen Ensembl |
|
|
CA410144591 rs942241647 |
78 | N>I | No |
ClinGen TOPMed gnomAD |
|
|
rs942241647 CA320124901 |
78 | N>T | No |
ClinGen TOPMed gnomAD |
|
|
CA320124887 rs909365510 |
80 | F>L | No |
ClinGen Ensembl |
|
|
CA410144561 rs1344405993 |
80 | F>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA410144525 rs1260700278 |
81 | A>D | No |
ClinGen TOPMed |
|
|
CA410144537 rs1184781431 |
81 | A>T | No |
ClinGen TOPMed |
|
|
rs1190060915 CA410144517 |
82 | R>C | No |
ClinGen TOPMed |
|
|
rs1481231434 CA410144513 |
82 | R>L | No |
ClinGen gnomAD |
|
|
CA320124876 rs1037532018 |
83 | L>V | No |
ClinGen Ensembl |
|
|
CA10010671 rs768390658 |
85 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10010670 rs746846902 |
87 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs745835656 CA10010667 |
90 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs778669761 CA10010666 |
93 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10010664 rs778020919 |
94 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs778020919 CA10010663 |
94 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA10010661 rs753128062 |
95 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA410144123 rs1313429232 |
97 | P>S | No |
ClinGen TOPMed |
|
|
CA410144079 rs1344053897 |
98 | A>D | No |
ClinGen gnomAD |
|
|
rs755238849 CA10010659 |
99 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10010658 rs766754894 |
99 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs766754894 CA10010657 |
99 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs1429543221 CA410143975 |
101 | Q>K | No |
ClinGen gnomAD |
|
|
rs1198329402 CA410143941 |
102 | P>S | No |
ClinGen gnomAD |
|
|
CA410143883 rs1354563775 |
103 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA410143835 rs186663238 |
105 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA10010656 rs186663238 |
105 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA410143834 rs1264353624 |
106 | V>I | No |
ClinGen gnomAD |
|
|
CA320124758 rs964807248 |
107 | P>A | No |
ClinGen Ensembl |
|
|
rs868557164 CA320124746 |
107 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA320124741 rs868557164 |
107 | P>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 109 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA410143495 rs1411222319 |
110 | D>G | No |
ClinGen gnomAD |
|
|
rs77196675 CA410143525 |
110 | D>N | No |
ClinGen gnomAD |
|
|
CA320124109 rs77196675 |
110 | D>Y | No |
ClinGen gnomAD |
|
|
rs1198907272 CA410143463 |
111 | S>A | No |
ClinGen gnomAD |
|
|
rs576191032 CA10010641 |
111 | S>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA10010640 rs554735388 |
112 | N>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1227875248 CA410143382 |
113 | Q>E | No |
ClinGen gnomAD |
|
|
rs536366573 CA10010638 |
116 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs536366573 CA320124071 |
116 | D>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA410143273 rs1382819147 |
117 | L>S | No |
ClinGen gnomAD |
|
|
rs1393861776 CA410143259 |
118 | L>V | No |
ClinGen gnomAD |
|
|
CA10010635 rs369219330 |
119 | W>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs752431917 CA10010634 |
120 | E>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 121 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA410143066 rs1307739992 |
124 | P>L | No |
ClinGen Ensembl |
|
|
CA410143001 rs759428180 |
127 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759428180 CA10010631 |
127 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10010630 rs774005539 |
128 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA10010628 rs766408231 |
130 | T>I | No |
ClinGen ExAC |
|
|
CA410142853 rs1250999118 |
133 | P>L | No |
ClinGen TOPMed |
|
|
rs1225452891 CA410142879 |
133 | P>T | No |
ClinGen TOPMed |
|
|
rs1284868626 CA410142022 |
137 | H>R | No |
ClinGen gnomAD |
|
|
rs1348256262 CA410142025 |
137 | H>Y | No |
ClinGen gnomAD |
|
|
rs776559036 CA10010602 |
138 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA10010601 rs371685464 |
140 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368596012 CA10010598 |
142 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA410141938 rs1228271210 |
142 | E>K | No |
ClinGen TOPMed |
|
|
CA410141891 rs1029166032 |
145 | I>F | No |
ClinGen gnomAD |
|
|
rs746207457 CA10010597 |
145 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA410141884 rs746207457 |
145 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1029166032 CA320122824 |
145 | I>V | No |
ClinGen gnomAD |
|
|
rs780645262 CA320122803 |
146 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs779615686 CA10010596 |
146 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747762582 CA10010595 |
147 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747762582 CA10010594 |
147 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs139553109 CA10010593 |
148 | S>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1461694981 CA410141833 |
149 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA10010592 rs754454018 |
150 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA10010590 rs374188850 |
151 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 155 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1223804778 CA410141786 |
156 | D>H | No |
ClinGen gnomAD |
|
|
CA10010587 rs377360381 |
158 | S>N | No |
ClinGen ESP ExAC gnomAD |
|
|
CA320122763 rs1041741921 |
161 | T>M | Variant assessed as Somatic; 4.62e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs753740715 CA10010585 COSM1413906 |
162 | R>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA410141722 rs1157457025 |
162 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1327548322 CA410141689 |
164 | L>V | No |
ClinGen TOPMed |
|
|
CA320122748 rs1010722195 |
165 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1057365152 CA320122731 |
168 | S>A | No |
ClinGen Ensembl |
|
|
rs764091077 CA10010584 |
169 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA410141561 rs1469502289 |
170 | P>H | No |
ClinGen TOPMed gnomAD |
|
|
rs760755463 CA10010583 |
170 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA10010582 rs756689989 |
173 | W>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 173 | W>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1170610120 CA410141453 |
174 | A>V | No |
ClinGen gnomAD |
|
|
rs1569077151 CA410141360 |
178 | K>E | No |
ClinGen Ensembl |
|
|
CA410141341 rs1476305042 |
179 | A>T | No |
ClinGen gnomAD |
|
|
CA410141314 rs1190630933 |
180 | Q>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 183 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs147415181 CA10010580 |
183 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA410141188 rs1289592354 |
185 | G>C | No |
ClinGen TOPMed |
|
|
CA410141133 rs1569077132 |
188 | Q>E | No |
ClinGen Ensembl |
|
|
CA10010579 rs774855346 |
188 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA410141089 rs1441487879 |
190 | C>Y | No |
ClinGen gnomAD |
|
|
CA410140969 rs1335974496 |
196 | T>S | No |
ClinGen TOPMed |
|
|
CA10010578 rs771356652 |
197 | L>W | No |
ClinGen ExAC gnomAD |
|
|
CA410140924 rs1340581406 |
199 | K>E | No |
ClinGen gnomAD |
|
|
rs778294070 CA10010577 |
200 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778294070 CA10010576 |
200 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA410139950 rs1443235742 |
203 | D>N | No |
ClinGen gnomAD |
|
|
rs771500243 CA10010550 |
203 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA410139923 rs1307189913 |
204 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1279459162 CA410139910 |
205 | K>Q | No |
ClinGen TOPMed |
|
|
CA410139900 rs1367351030 |
205 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1165474520 CA410139882 |
206 | L>I | No |
ClinGen gnomAD |
|
|
rs201198208 CA10010547 |
207 | S>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201198208 CA10010548 |
207 | S>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA10010545 rs753648904 |
208 | S>F | No |
ClinGen ExAC gnomAD |
|
|
COSM3841820 rs774052186 CA320121781 |
211 | R>C | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA320121780 rs1042218992 |
211 | R>H | No |
ClinGen TOPMed |
|
|
CA10010542 rs752617848 |
213 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA10010541 rs767719921 |
213 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA410139711 rs752617848 |
213 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs1008517432 CA320121757 |
215 | Q>R | No |
ClinGen Ensembl |
|
|
rs1293103505 CA410139579 |
217 | S>G | No |
ClinGen gnomAD |
|
|
CA10010539 rs751861655 CA10010540 |
217 | S>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA10010537 rs763275262 |
219 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766593943 CA10010538 |
219 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA320121720 rs369292224 |
220 | Y>C | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1468092437 CA410139524 |
221 | W>R | No |
ClinGen TOPMed |
|
|
CA410139495 rs1350119899 |
221 | W>S | No |
ClinGen gnomAD |
|
|
CA10010536 rs376799218 |
222 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376799218 CA10010535 |
222 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1407757361 CA410139432 |
223 | H>L | No |
ClinGen gnomAD |
|
|
rs1407757361 CA410139435 |
223 | H>P | No |
ClinGen gnomAD |
|
|
rs1396283939 CA410139426 |
223 | H>Q | No |
ClinGen TOPMed |
|
|
rs1407757361 CA410139433 |
223 | H>R | No |
ClinGen gnomAD |
|
|
CA10010534 rs528831946 |
226 | L>F | No |
ClinGen 1000Genomes ExAC |
|
| TCGA novel | 227 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs202191803 CA410139114 |
234 | R>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA10010532 rs202191803 |
234 | R>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA410139111 rs1435700392 |
234 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA10010530 rs774028803 |
237 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201817852 CA10010529 |
239 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749108299 CA10010528 |
243 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1235392064 CA410138765 |
244 | K>Q | No |
ClinGen TOPMed |
|
|
CA10010526 rs755808876 |
245 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748118576 CA10010525 |
248 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs781238176 CA10010524 |
249 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs61746119 CA10010522 |
251 | D>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA10010523 rs755151062 |
251 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1328654524 CA410138588 |
253 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA10010519 rs750543203 |
256 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA410138489 rs762810588 CA320121616 |
259 | M>I | No |
ClinGen gnomAD |
|
|
CA10010518 rs765644151 |
259 | M>R | No |
ClinGen ExAC gnomAD |
|
|
rs778957930 CA10010498 |
263 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200709205 CA10010497 |
264 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10010496 rs372698314 |
266 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1178101440 CA410138108 |
267 | T>P | No |
ClinGen TOPMed |
|
|
rs575872308 CA10010495 |
268 | S>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1020547877 CA320120907 |
269 | L>V | No |
ClinGen TOPMed |
|
|
rs367904759 CA410138061 |
270 | Y>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10010492 rs765936971 |
275 | T>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 276 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10010490 rs147115711 |
279 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA410137914 rs1388329916 |
279 | P>S | No |
ClinGen gnomAD |
|
|
rs1424530479 CA410137893 |
280 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA320120877 rs981813053 |
283 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA410137784 rs1307981562 |
285 | T>A | No |
ClinGen TOPMed |
|
|
rs141780331 CA10010489 |
285 | T>N | No |
ClinGen ESP ExAC TOPMed |
|
|
rs1301920879 COSM250918 CA410137761 |
286 | Y>* | liver [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs1276549539 CA410137717 |
288 | F>L | No |
ClinGen gnomAD |
|
|
CA10010487 rs776562020 |
289 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA10010486 rs768499054 |
290 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs759427178 CA320120833 |
292 | F>C | No |
ClinGen Ensembl |
|
|
CA10010483 rs542296982 |
293 | R>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs757636594 CA410137635 |
293 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757636594 CA10010482 |
293 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1363072955 CA410137554 |
296 | G>A | No |
ClinGen gnomAD |
|
|
CA410137533 rs148095112 |
298 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10010481 rs148095112 |
298 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1446417479 CA410137523 |
298 | A>V | No |
ClinGen gnomAD |
|
|
rs757469136 CA10010480 |
299 | G>A | No |
ClinGen ExAC |
|
|
rs1479816645 CA410137392 |
303 | I>M | No |
ClinGen TOPMed |
|
|
rs756425637 CA10010478 |
306 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756425637 CA10010477 |
306 | L>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs146301000 CA10010476 |
307 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs762575148 CA10010474 |
307 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs1458455259 CA410137281 |
309 | P>L | No |
ClinGen gnomAD |
|
|
rs1367991380 CA410137274 |
310 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1185643780 CA410137225 |
312 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
rs751927127 CA10010473 |
312 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA410137197 rs1388480712 |
313 | G>D | No |
ClinGen gnomAD |
|
|
CA410137200 rs1253636352 |
313 | G>S | No |
ClinGen gnomAD |
|
|
rs1182618992 CA410137118 |
316 | E>G | No |
ClinGen gnomAD |
|
|
CA10010471 rs761560613 |
317 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1330053141 CA410137033 |
320 | N>D | No |
ClinGen TOPMed |
|
|
CA320120744 rs898637106 |
320 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1322225569 CA410135500 |
327 | L>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA410135482 rs1383970683 |
328 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA410135464 rs775130920 |
330 | I>K | No |
ClinGen ExAC gnomAD |
|
|
CA10010446 rs775130920 |
330 | I>R | No |
ClinGen ExAC gnomAD |
|
|
CA10010444 rs759408217 |
332 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs199989677 CA10010443 |
333 | S>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs752565840 CA320119497 |
335 | H>R | No |
ClinGen Ensembl |
|
|
rs369488404 CA10010441 |
339 | T>A | No |
ClinGen ESP ExAC gnomAD |
|
|
CA410135234 rs1196718351 |
341 | S>F | No |
ClinGen gnomAD |
|
|
rs1307753258 CA410135208 |
342 | G>A | No |
ClinGen gnomAD |
|
|
CA10010439 rs146461848 |
344 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA10010438 rs368570176 |
344 | S>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs146461848 CA10010440 |
344 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 345 | L>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1463281327 CA410135123 |
347 | Y>* | No |
ClinGen gnomAD |
|
|
rs1207639195 CA410135125 |
347 | Y>C | No |
ClinGen gnomAD |
|
|
rs887928187 CA320119447 |
348 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA410135093 rs1201389346 |
349 | E>A | No |
ClinGen gnomAD |
|
|
rs149158600 CA10010419 |
350 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA10010418 rs149158600 |
350 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs768933410 CA10010417 |
351 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA410134942 rs1447614813 |
354 | S>G | No |
ClinGen gnomAD |
|
|
rs772689954 CA10010414 |
355 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs748872375 CA10010413 |
356 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs755049929 CA10010412 |
359 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA320119339 rs866185028 |
363 | S>F | No |
ClinGen Ensembl |
|
|
rs1419480277 CA410134777 |
364 | W>R | No |
ClinGen TOPMed |
|
|
rs1415355246 CA410134751 |
365 | L>P | No |
ClinGen gnomAD |
|
|
CA410134713 rs1419851437 |
368 | M>L | No |
ClinGen gnomAD |
|
|
rs1163441009 CA410134685 |
369 | G>A | No |
ClinGen gnomAD |
|
|
CA320119334 rs753980885 |
370 | V>A | No |
ClinGen Ensembl |
|
|
rs373892714 CA320119327 |
371 | Q>E | No |
ClinGen ESP TOPMed |
|
|
rs924485427 CA320119323 |
374 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
CA410134585 rs1188547714 |
375 | K>N | No |
ClinGen gnomAD |
|
|
rs997405229 CA320119314 |
375 | K>R | No |
ClinGen Ensembl |
|
| TCGA novel | 376 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 379 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA410134524 rs1408916609 |
379 | I>R | No |
ClinGen TOPMed |
|
|
CA10010409 rs373262818 |
379 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA410134521 COSM174740 rs1251689801 |
380 | L>I | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs549882500 CA10010408 |
382 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA10010407 rs754779511 |
383 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA320119292 rs754779511 |
383 | K>T | No |
ClinGen ExAC gnomAD |
|
|
COSM1250592 rs758139862 CA10010384 |
385 | R>C | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA320118978 rs758139862 |
385 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10010383 rs750390868 |
385 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765189899 CA10010382 |
386 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA10010379 rs201828095 |
389 | H>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1435346296 CA410134342 |
390 | E>D | No |
ClinGen gnomAD |
|
|
rs142081989 CA10010378 |
390 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1388289814 CA410134352 |
390 | E>K | No |
ClinGen gnomAD |
|
|
CA410134329 rs760980116 |
391 | V>E | No |
ClinGen ExAC gnomAD |
|
|
CA10010377 rs760980116 |
391 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA10010375 rs775808423 |
398 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766241167 CA320118969 |
400 | V>A | No |
ClinGen Ensembl |
|
|
rs772599656 COSM1632463 CA10010374 |
402 | L>F | liver [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1231497130 CA410133993 |
404 | K>Q | No |
ClinGen TOPMed |
|
|
rs937979347 CA320118967 |
408 | T>I | No |
ClinGen Ensembl |
|
|
CA10010372 rs774773262 |
410 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747680781 CA10010370 |
411 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771456201 CA10010371 |
411 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1301868428 CA410133816 |
411 | L>W | No |
ClinGen gnomAD |
|
| TCGA novel | 413 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA410133752 rs1368098360 |
414 | F>S | No |
ClinGen gnomAD |
|
|
rs776211862 CA10010369 |
415 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA320118930 rs929436066 |
417 | N>K | No |
ClinGen gnomAD |
|
|
CA410133660 rs1387446454 |
418 | S>A | No |
ClinGen gnomAD |
|
|
rs768099763 CA10010367 |
420 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10010366 rs746684601 |
422 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA320118914 rs145111026 |
422 | V>L | No |
ClinGen ESP |
|
|
rs199603022 CA320118901 |
423 | A>S | No |
ClinGen Ensembl |
|
|
CA10010365 rs779641743 |
424 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1433402284 CA410133500 |
424 | T>P | No |
ClinGen gnomAD |
|
|
CA10010364 rs758229811 |
425 | S>* | No |
ClinGen ExAC gnomAD |
|
|
CA10010363 rs149183836 |
429 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA410133409 rs149183836 |
429 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 430 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA410133408 rs1183869069 |
430 | G>R | No |
ClinGen gnomAD |
|
|
rs778769757 CA10010362 |
431 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1256400575 CA410133384 |
432 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA410133320 rs1228451884 |
436 | L>F | No |
ClinGen gnomAD |
|
|
rs1276769096 CA410133325 |
436 | L>S | No |
ClinGen gnomAD |
|
|
CA410133296 rs1221130630 |
438 | P>A | No |
ClinGen TOPMed |
|
|
CA410133277 rs1397446763 |
439 | V>D | No |
ClinGen gnomAD |
|
|
rs753648048 CA10010359 |
442 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs764280645 CA10010358 |
442 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA10010357 rs756225695 |
443 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs753011971 CA10010356 |
445 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA410133124 rs1371431808 |
446 | M>I | No |
ClinGen gnomAD |
|
|
rs1009084664 CA320118864 |
446 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs138335198 CA10010355 |
447 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA410133044 rs1271524582 |
448 | M>I | No |
ClinGen TOPMed |
|
|
rs1437544261 CA410133008 |
450 | K>R | No |
ClinGen TOPMed |
|
|
CA410132013 rs1475938224 |
451 | A>T | No |
ClinGen TOPMed |
|
|
CA10010329 rs766790421 |
452 | R>Q | No |
ClinGen ExAC TOPMed |
|
|
rs751675539 COSM170022 CA10010330 |
452 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1331621368 CA410131876 |
458 | T>R | No |
ClinGen TOPMed gnomAD |
|
|
rs773747139 CA10010325 |
462 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs190773441 CA320117665 |
463 | G>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs190773441 CA10010324 |
463 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1313728702 CA638053419 |
464 | Y>* | No |
ClinGen TOPMed |
|
|
rs959843545 CA320117652 |
464 | Y>H | No |
ClinGen gnomAD |
|
|
rs1569074441 CA410131753 |
465 | R>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA320117648 rs1035552737 |
466 | D>E | No |
ClinGen gnomAD |
|
|
CA410131703 rs1357430160 |
467 | Q>L | No |
ClinGen TOPMed |
|
|
rs1324084079 CA410131676 |
468 | F>C | No |
ClinGen gnomAD |
|
|
CA10010323 rs760236557 |
468 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA410131653 rs1286346460 |
470 | L>S | No |
ClinGen TOPMed |
|
|
rs771502356 CA10010321 |
471 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10010322 RCV000891005 rs140592434 |
471 | E>K | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1469501352 CA410131626 |
472 | I>V | No |
ClinGen gnomAD |
|
|
rs905816355 CA320117616 |
473 | T>I | No |
ClinGen gnomAD |
|
|
CA10010319 rs773823866 |
475 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs749015296 CA410131537 |
476 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs749015296 CA10010317 |
476 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA10010318 rs770802007 |
476 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA410131530 rs1301407650 |
477 | M>V | No |
ClinGen gnomAD |
|
|
CA10010316 rs372126686 |
478 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10010315 rs560084014 |
480 | S>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA320117590 rs1031998264 |
482 | H>R | No |
ClinGen TOPMed |
|
|
rs544638959 CA10010313 |
482 | H>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA410131419 rs1601310705 |
483 | S>P | No |
ClinGen Ensembl |
|
|
CA410131383 rs1234641969 |
485 | T>I | No |
ClinGen gnomAD |
|
|
rs200678291 CA320117564 |
486 | M>I | No |
ClinGen 1000Genomes |
|
|
rs780104963 CA10010310 |
486 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs758843533 CA10010309 |
487 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1399878741 CA410131319 |
489 | K>Q | No |
ClinGen gnomAD |
|
|
CA10010307 rs146664036 RCV000913292 |
489 | K>R | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 491 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs768830292 CA320117534 |
493 | S>N | No |
ClinGen Ensembl |
|
|
CA410131239 rs1184609932 |
495 | S>F | No |
ClinGen TOPMed |
|
|
CA410131235 rs1376223846 |
496 | F>L | No |
ClinGen TOPMed |
|
|
CA10010306 rs762311856 |
496 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs1013780286 CA320117520 |
497 | S>F | No |
ClinGen TOPMed |
|
|
rs574138861 CA10010304 |
501 | Y>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1192049796 CA410131176 |
501 | Y>H | No |
ClinGen gnomAD |
|
| TCGA novel | 501 | Y>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10010303 rs758939875 |
502 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA410131162 rs1569074340 |
502 | P>S | No |
ClinGen Ensembl |
|
|
CA410131124 rs1374184533 |
505 | P>A | No |
ClinGen TOPMed |
|
|
rs1343027989 CA410131107 |
506 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA320117479 rs1002453914 |
508 | V>E | No |
ClinGen TOPMed gnomAD |
|
|
CA10010299 rs773150070 |
508 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs375735257 CA10010297 |
509 | F>L | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 509 | F>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1052326482 CA320117468 |
511 | I>T | No |
ClinGen Ensembl |
|
|
rs1396450720 CA410131006 |
511 | I>V | No |
ClinGen gnomAD |
|
|
CA410130915 rs932168555 |
514 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA10010294 rs768818442 |
514 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA410130901 rs1474227968 |
515 | M>T | No |
ClinGen gnomAD |
|
|
rs747034538 CA10010293 |
515 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs145014824 CA10010292 |
516 | D>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs145014824 CA410130886 |
516 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA410130856 rs1485570500 |
517 | K>E | No |
ClinGen gnomAD |
|
|
rs1376545072 CA410130758 |
520 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs201487323 CA10010288 |
521 | M>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs201487323 CA10010289 |
521 | M>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs750576423 CA10010290 |
521 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs957480991 CA320116715 |
523 | V>D | No |
ClinGen gnomAD |
|
|
CA10010264 rs756584370 |
525 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs141237312 CA10010263 RCV000951159 |
529 | T>I | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs749722029 CA10010261 |
530 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10010262 rs749722029 |
530 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA410129680 rs1369228533 |
531 | C>S | No |
ClinGen TOPMed |
|
|
CA410129627 rs1344968218 |
532 | G>A | No |
ClinGen gnomAD |
|
|
rs1161809165 CA410129578 |
534 | H>P | No |
ClinGen gnomAD |
|
|
rs529567515 CA10010258 |
535 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA410129560 rs529567515 |
535 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA10010259 rs764959235 |
535 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10010260 rs764959235 |
535 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA410129526 rs1271898015 |
536 | N>S | No |
ClinGen TOPMed |
|
|
rs776282583 CA10010257 |
537 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA10010256 rs763879389 |
537 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs763879389 CA410129501 |
537 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA410129443 rs1003541624 |
539 | E>D | No |
ClinGen gnomAD |
|
|
RCV000882693 rs147521584 CA10010255 |
539 | E>K | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA320116684 rs751648673 |
541 | L>F | No |
ClinGen gnomAD |
|
|
rs775449454 CA10010254 |
542 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs1601308818 CA410129373 |
542 | S>R | No |
ClinGen Ensembl |
|
|
rs772168759 CA10010253 |
544 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA10010251 rs774616573 |
545 | P>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 545 | P>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10010252 rs745916219 |
545 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1186162455 CA410129239 |
546 | L>S | No |
ClinGen TOPMed |
|
|
CA10010249 rs749446485 |
550 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778013273 CA10010248 |
552 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10010246 rs748637250 |
553 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs113553347 CA10010247 |
553 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1012950140 CA320116635 |
556 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1012950140 CA410128944 |
556 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA410128913 rs749937330 |
557 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10010243 rs749937330 |
557 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756970023 CA10010241 |
559 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs1401345729 CA410128886 |
559 | D>N | No |
ClinGen TOPMed |
|
|
CA320116597 rs940080293 |
560 | Y>C | No |
ClinGen Ensembl |
|
|
CA410128824 rs1452698968 |
561 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA410128756 rs1189478135 |
565 | R>K | No |
ClinGen gnomAD |
|
|
CA10010240 rs753472885 |
566 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1171137998 CA410128732 |
567 | S>R | No |
ClinGen gnomAD |
2 associated diseases with Q9NYP3
[MIM: 251230]: Microcephaly-micromelia syndrome (MIMIS)
A severe autosomal recessive disorder characterized by intrauterine growth restriction, marked microcephaly, craniofacial anomalies, skeletal dysplasia, and variable malformations of the limbs, particularly the upper limbs. It usually results in death in utero or in the perinatal period. {ECO:0000269|PubMed:28630177}. Note=The disease is caused by variants affecting the gene represented in this entry. This extremely rare syndrome is caused by an intronic mutation that leads to the retention of intron 6, probably resulting in non-sense mediated mRNA decay. This isoform has also been detected in healthy tissues, but at much lower levels than in MIMIS samples. {ECO:0000269|PubMed:28630177}.
[MIM: 617604]: Microcephaly, short stature, and limb abnormalities (MISSLA)
An autosomal recessive disorder characterized by intrauterine growth retardation, microcephaly, variable short stature, and limb abnormalities mainly affecting the upper limb and radial ray. Mild intellectual disability and developmental delay is observed in some patients. {ECO:0000269|PubMed:28191891}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A severe autosomal recessive disorder characterized by intrauterine growth restriction, marked microcephaly, craniofacial anomalies, skeletal dysplasia, and variable malformations of the limbs, particularly the upper limbs. It usually results in death in utero or in the perinatal period. {ECO:0000269|PubMed:28630177}. Note=The disease is caused by variants affecting the gene represented in this entry. This extremely rare syndrome is caused by an intronic mutation that leads to the retention of intron 6, probably resulting in non-sense mediated mRNA decay. This isoform has also been detected in healthy tissues, but at much lower levels than in MIMIS samples. {ECO:0000269|PubMed:28630177}.
- An autosomal recessive disorder characterized by intrauterine growth retardation, microcephaly, variable short stature, and limb abnormalities mainly affecting the upper limb and radial ray. Mild intellectual disability and developmental delay is observed in some patients. {ECO:0000269|PubMed:28191891}. Note=The disease is caused by variants affecting the gene represented in this entry.
No regional properties for Q9NYP3
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q9NYP3 | |||
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| replication fork | The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes. |
| replisome | A multi-component enzymatic machine at the replication fork which mediates DNA replication. Includes DNA primase, one or more DNA polymerases, DNA helicases, and other proteins. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
5 GO annotations of biological process
| Name | Definition |
|---|---|
| DNA damage checkpoint signaling | A signal transduction process that contributes to a DNA damage checkpoint. |
| DNA replication | The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA. |
| mitotic G2 DNA damage checkpoint signaling | A mitotic cell cycle checkpoint that detects and negatively regulates progression through the G2/M transition of the cell cycle in response to DNA damage. |
| nuclear DNA replication | The DNA-dependent DNA replication that occurs in the nucleus of eukaryotic organisms as part of the cell cycle. |
| replication fork protection | Any process that prevents the collapse of stalled replication forks. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q6P1U0 | donson | Protein downstream neighbor of son homolog | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MALSVPGYSP | GFRKPPEVVR | LRRKRARSRG | AAASPPRELT | EPAARRAALV | AGLPLRPFPA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| AGGRGGGSGG | GPAAARRNPF | ARLDNRPRVA | AEPPDGPARE | QPEAPVPFLD | SNQENDLLWE |
| 130 | 140 | 150 | 160 | 170 | 180 |
| EKFPERTTVT | ELPQTSHVSF | SEPDIPSSKS | TELPVDWSIK | TRLLFTSSQP | FTWADHLKAQ |
| 190 | 200 | 210 | 220 | 230 | 240 |
| EEAQGLVQHC | RATEVTLPKS | IQDPKLSSEL | RCTFQQSLIY | WLHPALSWLP | LFPRIGADRK |
| 250 | 260 | 270 | 280 | 290 | 300 |
| MAGKTSPWSN | DATLQHVLMS | DWSVSFTSLY | NLLKTKLCPY | FYVCTYQFTV | LFRAAGLAGS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| DLITALISPT | TRGLREAMRN | EGIEFSLPLI | KESGHKKETA | SGTSLGYGEE | QAISDEDEEE |
| 370 | 380 | 390 | 400 | 410 | 420 |
| SFSWLEEMGV | QDKIKKPDIL | SIKLRKEKHE | VQMDHRPESV | VLVKGINTFT | LLNFLINSKS |
| 430 | 440 | 450 | 460 | 470 | 480 |
| LVATSGPQAG | LPPTLLSPVA | FRGATMQMLK | ARSVNVKTQA | LSGYRDQFSL | EITGPIMPHS |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LHSLTMLLKS | SQSGSFSAVL | YPHEPTAVFN | ICLQMDKVLD | MEVVHKELTN | CGLHPNTLEQ |
| 550 | 560 | ||||
| LSQIPLLGKS | SLRNVVLRDY | IYNWRS |