Q9NRR4
Gene name |
DROSHA (RN3, RNASE3L, RNASEN) |
Protein name |
Ribonuclease 3 |
Names |
Protein Drosha, Ribonuclease III, RNase III, p241 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:29102 |
EC number |
3.1.26.3: Endoribonucleases producing 5'-phosphomonoesters |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
798 variants for Q9NRR4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA359329887 rs1580396270 RCV000984736 |
108 | R>K | Esophageal atresia [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA3218069 rs780835676 |
2 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1169598535 CA359331049 |
3 | Q>E | No |
ClinGen gnomAD |
|
|
rs576224164 CA3218068 |
3 | Q>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs576224164 CA359331047 |
3 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3218067 rs753200638 |
5 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1175601189 CA359331034 |
5 | N>S | No |
ClinGen gnomAD |
|
|
CA3218065 rs757939979 |
7 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA3218039 rs767584928 |
8 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs752503034 CA3218040 |
8 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs759489249 CA3218038 |
10 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3218037 rs774425927 |
11 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3218035 rs561496126 |
13 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3218034 rs200373457 |
14 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs200373457 CA115814289 |
14 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1196872143 CA359330838 |
15 | G>R | No |
ClinGen TOPMed |
|
|
rs373494822 CA3218031 |
16 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3218030 rs769152940 |
16 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3218028 rs780530025 |
19 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359330811 rs780530025 |
19 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1206389569 CA359330808 |
20 | R>Q | No |
ClinGen gnomAD |
|
|
rs1485879154 CA359330798 |
22 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA359330799 rs1485879154 |
22 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1331222636 CA359330797 |
22 | R>Q | No |
ClinGen TOPMed |
|
|
rs748803612 CA3218026 |
23 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1208698992 CA359330769 |
27 | A>T | No |
ClinGen gnomAD |
|
|
rs1561302087 CA359330763 |
28 | R>G | No |
ClinGen Ensembl |
|
|
CA115814268 rs375227605 |
30 | S>L | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA3218024 rs202053700 |
32 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3218025 rs202053700 |
32 | P>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs752554295 CA3218023 |
33 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359330731 rs752554295 |
33 | S>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM449526 CA3218021 rs569160930 |
37 | Q>P | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA359330701 rs1208324697 |
38 | N>D | No |
ClinGen TOPMed |
|
|
rs1384020854 CA359330686 |
40 | R>T | No |
ClinGen gnomAD |
|
|
CA359330668 rs1580397687 |
43 | H>P | No |
ClinGen Ensembl |
|
|
CA3218019 rs766308154 |
43 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA3218018 rs762973173 |
44 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA359330651 rs1457168199 |
46 | Q>K | No |
ClinGen gnomAD |
|
|
rs1561301851 CA359330639 |
47 | P>L | No |
ClinGen Ensembl |
|
|
rs866614026 CA115814252 |
47 | P>T | No |
ClinGen Ensembl |
|
|
rs866573300 CA115814247 |
48 | P>L | No |
ClinGen Ensembl |
|
|
CA3218014 rs762025768 |
49 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1005888630 CA115814243 |
52 | Q>P | No |
ClinGen gnomAD |
|
|
rs1186109639 CA359330574 |
53 | Y>C | No |
ClinGen gnomAD |
|
|
rs776826312 CA3218013 |
53 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359330558 rs1580397426 |
54 | E>D | No |
ClinGen Ensembl |
|
|
CA3218012 RCV000969885 rs201445638 |
56 | P>S | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA3218010 rs776021397 |
57 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359330522 rs1356034716 |
58 | A>T | No |
ClinGen gnomAD |
|
|
CA3218009 rs772594418 |
59 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA115814228 rs902111218 |
61 | T>I | No |
ClinGen Ensembl |
|
|
rs1580397312 CA359330495 |
61 | T>P | No |
ClinGen Ensembl |
|
|
rs748771830 CA3218008 |
62 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA3218007 rs777282094 |
63 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3827930 rs35342496 CA3218006 |
67 | P>S | breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs35342496 VAR_051866 CA3218005 RCV000966940 |
67 | P>T | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
RCV001280763 rs1740629052 |
68 | A>D | No |
ClinVar dbSNP |
|
|
CA3218003 rs780968053 |
69 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3218002 rs754860152 |
69 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs780968053 CA359330414 |
69 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3947426 rs751358812 CA3218001 |
70 | N>S | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs779874924 CA3218000 |
72 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs758427485 CA115814208 |
73 | P>R | No |
ClinGen Ensembl |
|
|
CA3217999 rs758294734 |
74 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA115814201 rs762001670 COSM185379 |
75 | R>* | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs546365755 CA359330323 |
75 | R>L | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs546365755 CA115814198 COSM1067243 |
75 | R>Q | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes NCI-TCGA TOPMed gnomAD |
|
CA3217998 rs750471433 |
77 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3217997 rs765422251 |
78 | F>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359330268 rs1296696378 |
79 | V>A | No |
ClinGen TOPMed |
|
|
rs1265775275 CA359330261 |
80 | P>S | No |
ClinGen gnomAD |
|
|
rs754110575 CA3217995 |
82 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359330235 rs754110575 |
82 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359330224 rs1274114593 |
83 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
RCV000974384 rs149389256 CA3217992 |
83 | P>L | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs149389256 CA3217993 |
83 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3217994 rs149389256 |
83 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1275479127 CA359330200 |
85 | M>L | No |
ClinGen gnomAD |
|
|
rs1232506846 CA359330171 |
86 | P>L | No |
ClinGen gnomAD |
|
|
rs530480889 CA3217990 |
87 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs774717863 CA3217988 |
88 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA3217986 rs200906186 |
89 | A>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3217987 rs200906186 |
89 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA3217983 rs746810149 |
92 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA359330076 rs1478024603 |
94 | P>S | No |
ClinGen gnomAD |
|
|
rs541915232 CA3217979 |
95 | P>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs541915232 CA359330060 |
95 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs541915232 CA3217980 |
95 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs758120846 CA3217981 |
95 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1413580256 CA359330029 |
97 | P>L | No |
ClinGen TOPMed |
|
|
CA3217977 rs199846087 |
100 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs767992870 CA3217973 |
101 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753008648 CA3217974 |
101 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA3217972 rs759796209 |
104 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs774960659 CA3217971 |
104 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA359329936 rs1276120280 |
105 | H>N | No |
ClinGen gnomAD |
|
|
rs766953102 CA3217970 |
105 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA359329872 rs1580396223 |
109 | H>P | No |
ClinGen Ensembl |
|
|
CA359329874 rs1286197274 |
109 | H>Y | No |
ClinGen gnomAD |
|
|
CA359329840 rs1233411267 |
111 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs776219709 CA3217968 |
113 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA115814124 rs989590447 |
115 | P>S | No |
ClinGen TOPMed |
|
|
CA359329812 rs1332932638 |
116 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA3217966 rs774989618 |
120 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774989618 CA3217965 |
120 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs999494986 CA115814112 |
122 | P>L | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 123 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs540826739 CA3217964 |
124 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1201986317 CA359329743 |
125 | P>S | No |
ClinGen TOPMed |
|
|
rs1411750304 CA359329689 |
129 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
rs878897760 CA115814107 |
129 | N>T | No |
ClinGen Ensembl |
|
|
rs917857113 CA359329672 |
131 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA115814101 rs917857113 |
131 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3217961 rs757140691 |
132 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1186949948 CA359329659 |
133 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1160380873 CA359329646 |
134 | G>E | No |
ClinGen TOPMed |
|
|
CA359329650 rs1472638449 |
134 | G>R | No |
ClinGen TOPMed |
|
|
CA115814097 rs990663334 |
135 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 136 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1269978298 CA359329624 |
137 | P>S | No |
ClinGen gnomAD |
|
|
CA359329581 rs1377593142 |
140 | G>V | No |
ClinGen TOPMed |
|
|
rs1209326010 CA359329555 |
142 | F>L | No |
ClinGen gnomAD |
|
|
rs1328368362 CA359329524 |
145 | M>L | No |
ClinGen gnomAD |
|
|
CA115814094 rs906526500 |
146 | M>L | No |
ClinGen TOPMed |
|
|
rs1464818570 CA359329492 |
147 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs749384962 CA3217960 |
148 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359329475 rs1266083918 |
148 | P>S | No |
ClinGen gnomAD |
|
|
rs1580395717 CA359329457 |
150 | S>P | No |
ClinGen Ensembl |
|
|
CA359329448 rs777764329 |
151 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA3217959 COSM738151 rs777764329 |
151 | M>V | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3217957 rs753023337 |
153 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1414128155 CA359329397 |
154 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
COSM368892 rs558382994 CA115814082 |
154 | P>S | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes NCI-TCGA gnomAD |
|
rs558382994 CA359329404 |
154 | P>T | No |
ClinGen 1000Genomes gnomAD |
|
|
CA3217956 rs767602272 |
155 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359329373 rs1157408195 |
156 | P>L | No |
ClinGen gnomAD |
|
|
CA359329377 rs1157408195 |
156 | P>R | No |
ClinGen gnomAD |
|
|
rs751822360 CA3217954 |
156 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA3217953 rs538177208 |
158 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs370727446 CA3217951 CA359329334 |
160 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1250037605 CA359329329 |
160 | M>T | No |
ClinGen gnomAD |
|
|
rs370727446 CA3217950 |
160 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3217949 rs760078843 |
161 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760078843 CA3217948 |
161 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745702685 CA3217945 |
162 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs752155947 CA115814060 |
163 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
rs752155947 CA359329295 |
163 | Q>K | No |
ClinGen TOPMed gnomAD |
|
|
CA3217944 rs774077875 |
163 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs770860452 CA3217943 |
164 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs77034974 CA3217941 |
170 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 170 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781498149 CA3217938 |
171 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs781498149 CA3217939 |
171 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA359329152 rs1287582647 |
174 | H>L | No |
ClinGen TOPMed gnomAD |
|
|
CA115814044 rs886155627 |
174 | H>Y | No |
ClinGen TOPMed |
|
|
rs1350877796 CA359329104 |
176 | N>H | No |
ClinGen gnomAD |
|
|
CA3217936 rs138754603 |
176 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs758820590 CA359329087 |
177 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA3217933 rs566621174 |
179 | P>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA115814030 rs1007677816 |
181 | S>G | No |
ClinGen gnomAD |
|
|
rs752103305 CA3217930 |
182 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs767215647 CA3217929 |
183 | N>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 183 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs773990094 CA3217927 |
184 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773990094 CA3217928 |
184 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359329030 rs1292981693 |
186 | Q>R | No |
ClinGen TOPMed |
|
|
rs762715791 CA3217926 |
187 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359328971 rs1340899177 |
195 | S>G | No |
ClinGen gnomAD |
|
|
rs1054557587 CA115814010 |
196 | A>T | No |
ClinGen gnomAD |
|
|
rs1304082332 CA359328952 |
197 | N>K | No |
ClinGen TOPMed |
|
|
CA3217923 rs769567702 |
198 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA115814005 rs974715206 |
199 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA359328916 rs1368902815 |
202 | P>L | No |
ClinGen gnomAD |
|
|
CA359328917 rs1368902815 |
202 | P>R | No |
ClinGen gnomAD |
|
|
rs371122199 CA3217921 |
203 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA115813990 rs781066515 COSM4141770 |
204 | F>L | ovary [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA3217918 rs747288637 |
206 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199612013 CA3217919 |
206 | H>R | No |
ClinGen 1000Genomes ExAC |
|
|
rs1271794085 CA359328363 |
207 | L>F | No |
ClinGen gnomAD |
|
|
rs780397814 CA3217917 |
208 | P>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 209 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs202227062 CA359328316 |
211 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3217915 rs202227062 |
211 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3217914 rs779587523 |
213 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs779587523 CA359328303 |
213 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359328302 rs779587523 |
213 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1263164551 CA359328304 |
213 | P>S | No |
ClinGen TOPMed |
|
|
rs752260854 CA3217912 |
215 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3217913 rs752260854 |
215 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3719734 CA115813965 rs958159275 |
216 | P>A | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA359328270 rs767003253 |
218 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1283399386 CA359328263 |
219 | R>S | No |
ClinGen gnomAD |
|
|
rs373280782 CA3217910 |
222 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA115813953 rs765986893 |
224 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs762758438 CA3217906 |
226 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3217905 rs772933006 |
226 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs550825992 CA3217904 |
227 | H>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1222095393 CA359328207 |
228 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA359328211 rs1301126250 |
228 | Y>N | No |
ClinGen gnomAD |
|
|
CA359328188 rs1561299476 |
230 | D>E | No |
ClinGen Ensembl |
|
|
CA359328194 rs1362483875 |
230 | D>H | No |
ClinGen TOPMed |
|
|
rs761719591 CA3217903 |
231 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA3217902 rs181678202 |
232 | R>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs747051575 CA3217900 |
234 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359328158 rs1370055307 |
235 | D>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 235 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs775888276 CA3217899 |
237 | S>N | No |
ClinGen ExAC TOPMed |
|
|
rs1358530359 CA359328135 |
238 | H>R | No |
ClinGen gnomAD |
|
|
rs970742651 CA115813925 |
240 | R>* | No |
ClinGen TOPMed |
|
|
rs1458721925 CA359328120 |
241 | G>R | No |
ClinGen gnomAD |
|
|
rs1412507378 CA359328102 |
243 | R>S | No |
ClinGen gnomAD |
|
|
rs200947287 CA3217898 |
244 | H>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1166754442 CA359328097 |
244 | H>R | No |
ClinGen gnomAD |
|
|
rs746252202 CA359328093 |
245 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376389062 CA3217896 |
245 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3217895 rs376389062 |
245 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs746252202 CA3217897 |
245 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359328081 rs1482620528 |
247 | L>P | No |
ClinGen gnomAD |
|
|
rs749820255 CA3217894 |
248 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3217892 rs373409442 |
249 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3217893 rs778322623 |
249 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359328070 rs751019044 |
250 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359328068 rs750540831 |
250 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3217890 rs750540831 |
250 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3217891 rs751019044 |
250 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750071831 CA3217888 |
251 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757978507 CA3217889 |
251 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA359328067 rs1334214909 |
251 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 252 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201151813 RCV000201337 CA210135 |
252 | R>Q | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs761643386 CA3217887 |
254 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3217886 rs776469778 |
254 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA115813886 rs997207151 |
256 | P>H | No |
ClinGen TOPMed |
|
|
rs764049500 CA3217885 |
256 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs545917535 CA359328035 |
257 | D>H | No |
ClinGen 1000Genomes TOPMed |
|
|
rs545917535 CA115813880 |
257 | D>N | No |
ClinGen 1000Genomes TOPMed |
|
|
rs1369866527 CA359328027 |
258 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA115813876 rs1039084165 |
258 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA359328006 rs1561298963 |
261 | Q>* | No |
ClinGen Ensembl |
|
|
CA359328007 rs1561298963 |
261 | Q>E | No |
ClinGen Ensembl |
|
|
CA359328005 rs544823531 |
261 | Q>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3217880 rs544823531 |
261 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs555684936 CA3217878 |
262 | D>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA359327997 rs1286958159 |
262 | D>E | No |
ClinGen TOPMed |
|
|
CA3217879 rs555684936 |
262 | D>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3217877 rs778176813 |
263 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3217876 rs756554242 |
263 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs541810066 CA115813852 |
264 | R>Q | No |
ClinGen 1000Genomes |
|
|
rs201911246 CA3217875 |
264 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3217874 rs61762999 |
265 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs61762999 CA359327982 |
265 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs757886642 CA3217873 |
267 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764909278 CA3217871 |
269 | Y>N | No |
ClinGen ExAC gnomAD |
|
|
rs757031683 CA3217870 |
270 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA3217869 rs753623166 COSM1223870 |
271 | R>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs372705339 CA3217868 |
271 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA359327939 rs1561298690 |
272 | G>E | No |
ClinGen Ensembl |
|
| TCGA novel | 273 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA359327928 rs1561298650 |
274 | T>A | No |
ClinGen Ensembl |
|
|
rs760626190 CA3217867 |
274 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA3217866 rs553006501 |
277 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs756928342 CA3217864 |
277 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3217865 rs756928342 |
277 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1067241 rs201276010 CA3217862 |
279 | R>C | endometrium prostate [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs201276010 CA3217863 |
279 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377246504 CA3217861 |
279 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs748712078 CA3217858 |
282 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA359327875 rs970773905 |
283 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA359327874 rs1434934578 |
283 | R>Q | No |
ClinGen TOPMed |
|
|
CA115813811 rs970773905 |
283 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs781645230 CA3217857 |
284 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs1490250338 CA359327860 |
285 | R>K | No |
ClinGen gnomAD |
|
| TCGA novel | 286 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3217835 rs770345967 |
286 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA3217834 rs749032311 COSM1067239 |
287 | R>* | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs777549538 CA3217833 |
287 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359327568 rs1410117035 |
289 | R>Q | No |
ClinGen gnomAD |
|
|
CA115812391 rs746400926 |
289 | R>W | Variant assessed as Somatic; 4.644e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3217832 rs756016580 |
291 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs752503363 CA3217831 |
291 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3217829 COSM1067237 rs751444046 |
295 | R>* | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs751444046 CA3217828 |
295 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA3217827 rs766534905 |
295 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs762915396 CA3217826 |
296 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA115812366 rs371022450 |
298 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA gnomAD |
|
rs1184774985 CA359327467 COSM3776621 |
305 | R>T | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1232457396 CA359327459 |
306 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1232457396 CA359327460 |
306 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs750683980 CA3217825 |
307 | Y>F | No |
ClinGen ExAC |
|
|
CA3217823 rs762186997 |
310 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA115812361 rs975072926 |
311 | Y>C | No |
ClinGen TOPMed |
|
|
CA3217822 rs574385750 |
313 | R>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs756137496 CA115812356 |
315 | G>E | No |
ClinGen Ensembl |
|
|
CA359327400 rs1195470543 |
315 | G>R | No |
ClinGen TOPMed |
|
|
CA115810181 rs530195732 |
318 | Y>D | No |
ClinGen 1000Genomes |
|
|
CA359327363 rs530195732 |
318 | Y>H | No |
ClinGen 1000Genomes |
|
|
CA3217808 rs560794749 |
319 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA359327343 rs1249752148 |
321 | S>A | No |
ClinGen gnomAD |
|
|
CA3217807 rs55656741 VAR_061778 |
321 | S>L | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1281851758 CA359327340 |
322 | V>I | No |
ClinGen gnomAD |
|
|
CA359327330 rs1229728511 |
323 | V>A | No |
ClinGen gnomAD |
|
|
rs1361683067 CA359327332 |
323 | V>F | No |
ClinGen TOPMed |
|
|
CA359327326 rs1356604664 |
324 | P>S | No |
ClinGen gnomAD |
|
|
CA359327308 rs1173905095 |
326 | P>L | No |
ClinGen Ensembl |
|
|
rs891237855 CA115810165 |
327 | A>S | No |
ClinGen Ensembl |
|
|
rs1313737794 CA359327296 |
329 | C>S | No |
ClinGen gnomAD |
|
|
CA359327281 rs1323090785 |
331 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1001212836 CA115810162 |
331 | P>L | No |
ClinGen TOPMed |
|
|
CA359327280 rs1323090785 |
331 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs750452216 CA3217805 |
335 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1561283913 CA359327248 |
336 | E>* | No |
ClinGen Ensembl |
|
|
CA359327231 rs1484730115 |
338 | I>T | No |
ClinGen TOPMed |
|
|
rs1407360896 CA359327227 |
339 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs538664122 CA3217804 |
343 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1189192557 CA359327186 |
344 | W>C | No |
ClinGen gnomAD |
|
|
rs1026615218 CA115810145 |
344 | W>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA359327182 rs1485493001 |
345 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
CA3217801 rs183833318 |
346 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 347 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1405504265 CA359327170 |
347 | P>L | No |
ClinGen TOPMed |
|
|
rs760926045 CA3217800 |
347 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs995839539 CA115810140 |
351 | V>M | No |
ClinGen TOPMed |
|
|
rs1345125647 CA359327136 |
353 | H>Y | No |
ClinGen TOPMed |
|
|
CA3217788 rs369352228 |
354 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3217787 rs187981384 |
354 | R>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs754108529 CA3217784 |
356 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA359327052 rs1346587320 |
363 | A>D | No |
ClinGen gnomAD |
|
|
rs536682487 CA3217783 |
363 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs756537138 CA3217782 COSM1067233 |
364 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3217781 rs752959469 |
364 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs1352483658 CA359327039 |
365 | W>C | No |
ClinGen gnomAD |
|
|
CA359327032 rs1298829217 |
366 | E>V | No |
ClinGen gnomAD |
|
|
rs1415224797 CA359327022 |
367 | E>D | No |
ClinGen TOPMed |
|
|
rs1461500398 CA359327015 |
368 | E>D | No |
ClinGen gnomAD |
|
|
CA3217780 rs201711846 |
371 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA359326996 rs201711846 |
371 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3217779 rs372990492 |
371 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1449178987 CA359326966 |
375 | N>D | No |
ClinGen TOPMed |
|
|
CA3217778 rs752096579 |
375 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA115809995 rs868596554 |
376 | Q>* | No |
ClinGen gnomAD |
|
|
rs1580359629 CA359326944 |
378 | S>P | No |
ClinGen Ensembl |
|
|
CA3217776 rs200485820 |
379 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA359326928 rs202183936 |
380 | K>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs768144343 CA3217774 |
382 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA359326912 rs1478716580 COSM1223868 |
382 | K>N | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA359326911 rs1238673093 |
383 | N>D | No |
ClinGen gnomAD |
|
|
rs1212923687 CA359326898 |
384 | Y>F | No |
ClinGen gnomAD |
|
|
CA359326892 rs1561282911 |
385 | T>N | No |
ClinGen Ensembl |
|
| TCGA novel | 385 | T>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs577582015 CA3217773 |
387 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs997346858 CA115809969 |
389 | E>G | No |
ClinGen Ensembl |
|
|
CA115809965 rs866775896 |
392 | P>S | No |
ClinGen Ensembl |
|
|
CA3217769 rs151137891 COSM738156 |
393 | E>K | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs199515305 CA115809951 |
394 | E>K | No |
ClinGen TOPMed |
|
|
CA359326823 rs1371339734 |
395 | T>I | No |
ClinGen gnomAD |
|
|
CA3217768 rs771040076 |
395 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs753113176 CA3217764 |
396 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA3217766 rs756235239 |
396 | M>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756235239 CA3217765 |
396 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs947440353 CA115809926 |
398 | D>E | No |
ClinGen TOPMed |
|
|
CA115809930 rs372868222 |
398 | D>N | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA359326806 rs1458575389 |
398 | D>V | No |
ClinGen gnomAD |
|
|
rs913196681 CA115809923 |
402 | E>K | No |
ClinGen TOPMed |
|
|
rs1416920568 CA359326698 |
405 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
CA359326697 rs1416920568 |
405 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1415409157 CA359326687 |
406 | E>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA359326667 rs1467198241 |
408 | L>F | No |
ClinGen TOPMed |
|
|
rs781464402 CA3217762 |
408 | L>H | No |
ClinGen ExAC gnomAD |
|
|
CA3217761 rs755369741 |
409 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA359326660 rs1332153612 |
409 | K>T | No |
ClinGen TOPMed |
|
| TCGA novel | 410 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs879773567 CA115809908 |
411 | V>M | No |
ClinGen TOPMed |
|
|
CA359326599 rs1202201920 |
414 | R>* | No |
ClinGen gnomAD |
|
|
COSM260584 CA3217760 rs752147785 |
414 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
| TCGA novel | 419 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 420 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3217759 rs766949030 |
425 | D>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 425 | D>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 436 | V>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767118229 CA3217734 |
442 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs1365662368 CA359325730 |
443 | D>G | No |
ClinGen TOPMed |
|
|
CA359325718 rs1173512343 |
445 | Y>H | No |
ClinGen gnomAD |
|
|
CA359325697 rs1363185295 |
447 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA115807996 rs868849269 |
448 | F>C | No |
ClinGen Ensembl |
|
|
CA359325687 rs774079547 |
449 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774079547 CA3217732 |
449 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774079547 CA359325688 |
449 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762868488 CA3217730 |
451 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs769802952 CA3217728 |
454 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs748214927 CA3217727 |
454 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777011909 CA3217726 |
456 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs1203903568 CA359325621 |
458 | K>R | No |
ClinGen TOPMed |
|
|
rs768940298 CA3217725 |
460 | K>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 461 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3217724 rs747382480 |
461 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs746412985 CA3217721 |
463 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM3393525 rs758774465 CA3217722 |
463 | R>W | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs779446613 CA3217720 |
465 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs755611158 CA3217719 |
465 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1395137814 CA359325571 |
467 | E>K | No |
ClinGen gnomAD |
|
|
rs1309380166 CA359325558 |
468 | P>L | No |
ClinGen gnomAD |
|
|
CA3217716 rs767173654 |
470 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs754562615 CA3217715 COSM280612 |
471 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3217713 rs367768426 |
474 | D>N | No |
ClinGen ESP ExAC gnomAD |
|
|
CA115806692 rs866846765 |
480 | S>F | No |
ClinGen Ensembl |
|
|
rs377493838 CA3217682 |
481 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA359325452 rs1452489319 |
482 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA115806656 COSM3410231 rs928405820 |
484 | E>K | Variant assessed as Somatic; impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA359325441 rs928405820 |
484 | E>Q | No |
ClinGen TOPMed |
|
|
rs1011317643 CA115806653 |
486 | E>V | No |
ClinGen Ensembl |
|
|
CA3217678 rs774715215 |
488 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1408696178 CA359325401 |
489 | E>V | No |
ClinGen TOPMed |
|
|
rs1385897566 CA359325392 |
490 | D>E | No |
ClinGen gnomAD |
|
|
rs1173219077 CA359325395 |
490 | D>G | No |
ClinGen TOPMed |
|
|
CA359325380 rs1182934007 |
492 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA359325371 rs1442636699 |
493 | C>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA359325375 rs1436162555 |
493 | C>R | No |
ClinGen TOPMed |
|
|
CA115806636 rs891578912 |
495 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA359325337 rs1373401772 |
498 | D>G | No |
ClinGen TOPMed |
|
|
rs1281665515 CA359325324 |
500 | E>A | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 501 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA359325297 rs1337600691 |
504 | V>I | No |
ClinGen TOPMed |
|
|
rs778233733 CA3217675 |
506 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA115806618 rs773602706 |
508 | I>V | No |
ClinGen Ensembl |
|
|
rs768183605 CA3217674 |
509 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs370207689 CA3217671 |
510 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA359325258 rs370207689 |
510 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3217672 rs370207689 |
510 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1272347075 CA359325253 |
511 | K>E | No |
ClinGen gnomAD |
|
|
rs1052876966 CA115806607 |
513 | A>T | No |
ClinGen Ensembl |
|
|
CA359325218 rs1296617291 |
516 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1162933367 CA359325177 |
521 | E>D | No |
ClinGen gnomAD |
|
|
rs1421550137 CA359325139 |
525 | N>S | No |
ClinGen gnomAD |
|
| TCGA novel | 526 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA115806589 rs1044116753 |
527 | P>L | No |
ClinGen TOPMed |
|
|
CA115806590 rs866310693 |
527 | P>S | No |
ClinGen Ensembl |
|
|
CA359336165 rs1481346076 |
530 | M>I | No |
ClinGen gnomAD |
|
|
CA3217648 rs756049295 |
536 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA359336039 rs1225717985 |
539 | S>N | No |
ClinGen gnomAD |
|
|
CA3217645 rs369576938 |
540 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA359335992 rs1441475056 |
543 | R>G | No |
ClinGen gnomAD |
|
|
rs763318231 CA3217642 |
544 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs1032572786 COSM1328847 CA115811493 |
544 | R>H | ovary Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1032572786 CA359335973 |
544 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1032572786 CA359335974 |
544 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs763318231 CA3217643 |
544 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA359335926 rs1307009533 |
548 | R>K | No |
ClinGen gnomAD |
|
| TCGA novel | 549 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1470096557 CA359335899 |
550 | S>G | No |
ClinGen gnomAD |
|
|
CA359335881 rs1315561758 |
551 | I>F | No |
ClinGen TOPMed |
|
| TCGA novel | 553 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3217641 rs773495518 |
554 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1173546422 CA359335815 |
556 | E>Q | No |
ClinGen gnomAD |
|
|
CA3217616 rs61751194 |
557 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1386514718 CA359334899 |
557 | A>V | No |
ClinGen gnomAD |
|
|
CA359334891 rs770561672 |
559 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs762755765 CA359334885 |
559 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3217615 rs770561672 |
559 | K>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 561 | C>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA359334860 rs1255983736 |
563 | P>R | No |
ClinGen gnomAD |
|
|
CA3217613 rs375949381 COSM3393524 |
564 | M>V | pancreas [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA359334845 rs1487001201 |
565 | T>I | No |
ClinGen gnomAD |
|
|
CA359334832 rs1261502014 |
567 | N>S | No |
ClinGen gnomAD |
|
|
rs372281038 CA3217612 |
569 | G>V | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 572 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1561252258 CA359334779 |
575 | R>Q | No |
ClinGen Ensembl |
|
|
CA3217611 rs777194754 |
575 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368688639 CA3217609 |
576 | I>L | No |
ClinGen ESP ExAC gnomAD |
|
|
CA115808389 rs868625207 |
580 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs780163067 CA3217606 |
582 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1387902367 CA359334340 |
586 | T>A | No |
ClinGen gnomAD |
|
|
rs768481311 CA3217590 |
592 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA359334265 rs1162402673 |
592 | I>V | No |
ClinGen TOPMed |
|
|
CA359334159 rs1364018217 |
599 | Y>C | No |
ClinGen TOPMed |
|
|
CA359334164 rs1451136278 |
599 | Y>H | No |
ClinGen gnomAD |
|
|
CA359334124 rs1265294759 |
601 | F>L | No |
ClinGen gnomAD |
|
|
rs1025855611 CA115807622 CA359334056 |
606 | M>I | No |
ClinGen gnomAD |
|
|
rs745898205 CA3217586 |
606 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1257253691 CA359334050 |
607 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA359334038 rs1299199946 |
607 | F>L | No |
ClinGen TOPMed |
|
|
CA359334000 rs1325297106 |
610 | A>V | No |
ClinGen gnomAD |
|
|
rs1283563273 CA359333986 |
611 | P>L | No |
ClinGen gnomAD |
|
| rs1330233722 | 612 | L>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 612 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1397819978 CA359333942 |
614 | N>K | No |
ClinGen gnomAD |
|
|
CA115805360 rs902058029 |
619 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs756470214 CA3217564 |
628 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1379719350 CA359332697 |
629 | I>V | No |
ClinGen gnomAD |
|
|
rs1446302214 CA359332646 |
633 | E>G | No |
ClinGen gnomAD |
|
|
CA359332649 rs1176716178 |
633 | E>K | No |
ClinGen gnomAD |
|
|
rs748478188 CA3217563 |
634 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA115805355 rs1008113408 |
637 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA359332137 rs1291264597 |
642 | V>L | No |
ClinGen gnomAD |
|
|
CA3217551 rs767296065 |
644 | G>W | No |
ClinGen ExAC |
|
|
rs1580258541 CA359332083 |
648 | F>S | No |
ClinGen Ensembl |
|
|
CA3217550 rs759529516 |
649 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA359332060 rs1354702847 |
650 | L>P | No |
ClinGen gnomAD |
|
|
rs943675843 CA115804982 |
655 | D>G | No |
ClinGen gnomAD |
|
| TCGA novel | 655 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 659 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA115804981 rs369595504 |
660 | Y>H | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1257442615 CA359331850 |
665 | K>N | No |
ClinGen TOPMed |
|
|
CA359331856 rs1350501144 |
665 | K>T | No |
ClinGen gnomAD |
|
|
rs773404948 CA3217522 |
666 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA3217521 rs769977886 |
667 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762172048 CA115804585 |
668 | L>F | No |
ClinGen ExAC |
|
|
rs1375577975 CA359331688 |
668 | L>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3217519 rs576947167 |
669 | F>I | No |
ClinGen ExAC gnomAD |
|
|
CA115804580 rs576947167 |
669 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1003667335 CA115804578 |
669 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA359331674 rs1445887286 |
669 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
CA359331656 rs1193911588 |
670 | E>D | No |
ClinGen TOPMed |
|
| TCGA novel | 671 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1246856914 CA359331617 |
673 | P>L | No |
ClinGen TOPMed |
|
|
rs747348733 CA3217517 |
673 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1426280391 CA359331606 |
674 | P>L | No |
ClinGen TOPMed |
|
|
CA359331612 rs1561231356 |
674 | P>S | No |
ClinGen Ensembl |
|
|
rs1191660879 CA359331562 |
677 | P>L | No |
ClinGen TOPMed |
|
|
CA115804571 rs375263089 |
678 | R>I | No |
ClinGen ESP TOPMed |
|
|
CA359331525 rs1358196692 |
681 | F>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1580251302 CA359331503 |
684 | R>H | No |
ClinGen Ensembl |
|
|
CA3217504 rs750302253 |
692 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1419681286 CA359330504 |
699 | M>L | No |
ClinGen gnomAD |
|
|
rs761941125 CA3217502 |
699 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1193615533 CA359330419 |
703 | L>F | No |
ClinGen TOPMed |
|
|
rs1422048578 CA359330363 |
708 | R>K | No |
ClinGen TOPMed |
|
|
rs759616408 CA115801877 |
711 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1255842575 CA359330326 |
711 | K>R | No |
ClinGen gnomAD |
|
|
rs768940137 CA3217500 |
715 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359330223 rs1403861574 |
719 | I>M | No |
ClinGen TOPMed |
|
|
CA359330215 rs1215959799 |
720 | A>V | No |
ClinGen gnomAD |
|
|
CA3217498 rs775989425 |
721 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359330131 rs1293897279 COSM1739152 |
727 | E>K | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA359330062 rs1366306381 |
731 | Q>H | No |
ClinGen TOPMed |
|
|
CA359329954 rs1390169495 |
739 | G>V | No |
ClinGen gnomAD |
|
|
rs746436688 CA3217496 |
740 | M>K | No |
ClinGen ExAC gnomAD |
|
|
CA3217497 rs772310351 |
740 | M>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3217495 rs779362571 |
741 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359329921 rs1297095352 |
742 | V>L | No |
ClinGen gnomAD |
|
|
rs1397551991 CA359329897 |
743 | T>I | No |
ClinGen gnomAD |
|
|
CA359329899 rs1397551991 |
743 | T>S | No |
ClinGen gnomAD |
|
|
rs934462217 CA115801864 |
744 | N>H | No |
ClinGen TOPMed |
|
|
rs747610669 CA3217493 |
746 | G>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 747 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs202101007 CA115801861 |
747 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3217491 rs202101007 COSM185363 |
747 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA359328856 rs1226092566 |
753 | R>H | No |
ClinGen TOPMed |
|
|
rs12517177 CA115801024 |
757 | L>V | No |
ClinGen Ensembl |
|
|
COSM482706 CA359328815 rs1390623554 |
759 | R>H | kidney Variant assessed as Somatic; 0.0 impact. large_intestine [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs536731391 CA115801022 |
763 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
rs188921591 CA3217481 |
764 | P>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1580197566 CA359328771 |
765 | D>E | No |
ClinGen Ensembl |
|
|
rs767966111 CA3217479 |
765 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359328737 rs1476924065 |
770 | P>L | No |
ClinGen gnomAD |
|
|
CA3217477 rs374017591 |
772 | I>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA359328721 rs1265142476 |
773 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA359328694 rs1200410533 |
777 | I>V | No |
ClinGen gnomAD |
|
|
rs1458058411 COSM1223867 CA359328684 |
778 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs370301677 CA3217474 |
782 | L>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3217465 rs764283487 |
789 | Q>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 793 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3217464 rs756116730 |
793 | L>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 800 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs376262500 CA3217461 |
801 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3217459 rs766729936 |
813 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA359328427 rs1412090120 |
813 | T>S | No |
ClinGen gnomAD |
|
|
rs767292159 CA115800626 |
819 | A>V | No |
ClinGen gnomAD |
|
|
rs750947717 CA3217440 |
823 | E>D | No |
ClinGen ExAC gnomAD |
|
| rs1471632102 | 828 | I>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA359327802 rs1193883612 |
829 | R>L | No |
ClinGen gnomAD |
|
|
CA3217436 rs771607570 |
829 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 834 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 835 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 838 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774124987 CA359327726 |
840 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774124987 CA3217434 |
840 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3217431 rs777769407 |
843 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA3217430 rs769557468 |
848 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA3217428 rs566677602 |
852 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs755033541 CA3217427 |
853 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359327639 rs1339947335 |
853 | R>H | No |
ClinGen gnomAD |
|
|
CA115800106 rs1559205 |
854 | S>F | No |
ClinGen Ensembl |
|
|
rs1268485783 CA359327623 |
856 | V>I | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 858 | Q>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1438548290 CA359326773 |
860 | A>E | No |
ClinGen gnomAD |
|
|
CA359326765 rs1378841392 |
861 | M>V | No |
ClinGen gnomAD |
|
|
CA359326680 rs1464824369 |
867 | T>I | No |
ClinGen gnomAD |
|
|
CA359326628 rs1352370629 |
870 | I>V | No |
ClinGen gnomAD |
|
|
rs372313396 CA3217406 |
871 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA359326611 rs1466433904 |
871 | R>H | No |
ClinGen TOPMed |
|
|
CA3217405 rs758679251 |
873 | H>L | No |
ClinGen ExAC gnomAD |
|
|
rs746100767 CA3217404 |
873 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA3217402 rs368409491 |
878 | H>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3217403 rs771020003 |
878 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3217401 rs754323893 |
880 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1344446153 CA359326481 |
880 | D>G | No |
ClinGen TOPMed |
|
|
rs754538975 CA359326443 |
883 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3217399 rs754538975 |
883 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA115795868 rs1024646421 |
885 | Y>F | No |
ClinGen Ensembl |
|
|
rs1277920308 CA359326393 |
886 | T>S | No |
ClinGen gnomAD |
|
|
rs1397112478 CA359326374 |
888 | Q>K | No |
ClinGen gnomAD |
|
|
CA3217398 COSM274877 rs267600599 |
890 | R>C | Variant assessed as Somatic; 0.0 impact. NS large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3217397 rs765972099 |
890 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs267600599 CA359326347 |
890 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA359326325 rs1445815042 |
893 | L>F | No |
ClinGen gnomAD |
|
|
CA3217396 rs762575748 |
893 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA359326292 rs1360547844 |
897 | M>V | No |
ClinGen gnomAD |
|
|
CA115794649 rs886369396 |
905 | N>S | No |
ClinGen Ensembl |
|
| TCGA novel | 912 | H>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3217379 rs766022493 |
923 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA359326081 rs1424657857 |
926 | K>R | No |
ClinGen gnomAD |
|
|
CA359326041 rs1478853589 |
932 | V>I | No |
ClinGen gnomAD |
|
|
CA359326031 rs1263918687 |
933 | H>R | No |
ClinGen gnomAD |
|
|
rs1267043247 CA359326014 |
935 | M>I | No |
ClinGen gnomAD |
|
|
CA3217377 rs764880804 |
935 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761529733 CA3217375 |
935 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA3217376 rs764880804 |
935 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776471094 CA359325995 |
938 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 946 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs757854835 CA3217359 |
947 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA3217358 rs749893180 |
950 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA359325890 rs1387790694 |
951 | R>H | No |
ClinGen gnomAD |
|
| TCGA novel | 956 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs757002340 CA3217356 |
960 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359325829 rs757002340 |
960 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3217337 CA115795576 rs756702395 |
961 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs1184670048 CA359340546 |
965 | N>D | No |
ClinGen TOPMed |
|
|
CA359340544 rs1389821370 |
965 | N>S | No |
ClinGen gnomAD |
|
|
rs1303485152 CA359340528 |
967 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1303485152 CA359340527 |
967 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA115795566 rs867272063 |
969 | E>* | No |
ClinGen Ensembl |
|
|
rs1160335586 CA359340504 |
971 | L>M | No |
ClinGen gnomAD |
|
|
rs866480882 CA115795550 |
974 | A>D | No |
ClinGen Ensembl |
|
|
rs199607879 CA3217332 |
976 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1441725361 CA359339888 |
982 | V>A | No |
ClinGen TOPMed |
|
|
CA3217314 rs777416100 |
982 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1352428379 CA359339827 |
987 | L>S | No |
ClinGen TOPMed |
|
|
rs866243371 CA115794573 |
989 | P>S | No |
ClinGen Ensembl |
|
|
CA359339783 rs1431457323 |
991 | L>M | No |
ClinGen gnomAD |
|
|
CA3217312 rs747793683 |
997 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs1325757069 CA359339714 |
997 | A>T | No |
ClinGen gnomAD |
|
| TCGA novel | 999 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 999 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3217311 rs781077537 |
1000 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1580081724 CA359339659 |
1002 | A>S | No |
ClinGen Ensembl |
|
|
CA3217309 rs754704305 COSM1186750 |
1003 | I>V | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed |
|
CA115794544 rs754092299 |
1007 | Q>H | No |
ClinGen gnomAD |
|
|
CA359339595 rs1459542941 |
1007 | Q>L | No |
ClinGen gnomAD |
|
|
CA359339587 rs1193726633 |
1008 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA3217307 rs766184093 |
1010 | A>T | No |
ClinGen ExAC |
|
|
rs1191592907 CA359339550 |
1011 | M>L | No |
ClinGen gnomAD |
|
|
CA115794503 rs1052373237 |
1011 | M>R | No |
ClinGen TOPMed |
|
|
rs764156937 CA3217282 |
1016 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs374967751 CA359339314 |
1018 | L>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3217280 rs775775322 |
1020 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs767861074 CA3217279 |
1020 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA115791670 rs748232220 |
1026 | H>Y | No |
ClinGen Ensembl |
|
|
rs1003588847 CA115791661 |
1034 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
rs774814888 CA3217277 |
1039 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359339166 rs1580067253 |
1040 | M>T | No |
ClinGen Ensembl |
|
|
rs761184189 CA3217275 |
1040 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA359339133 rs776346705 |
1044 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs746673717 CA3217272 |
1048 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs775235591 CA3217254 |
1051 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs778714196 CA115789851 |
1058 | E>V | No |
ClinGen TOPMed |
|
|
rs1489218491 CA359338849 |
1060 | A>T | No |
ClinGen gnomAD |
|
|
CA3217251 rs370990538 |
1066 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1214848609 CA359338773 |
1066 | R>H | No |
ClinGen gnomAD |
|
|
rs757001618 CA3217250 |
1068 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3217249 rs749243662 |
1070 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA115789842 rs749243662 |
1070 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs777752846 CA3217248 |
1070 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs542828086 CA3217247 |
1072 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA359338707 rs1354342796 |
1072 | P>S | No |
ClinGen gnomAD |
|
|
rs1394064377 CA359338593 |
1073 | D>A | No |
ClinGen gnomAD |
|
| TCGA novel | 1073 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3217231 COSM274875 rs376727217 |
1075 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA359338564 rs1186040397 |
1075 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1422865070 CA359338546 |
1076 | E>G | No |
ClinGen TOPMed |
|
|
rs773151368 CA3217229 |
1076 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA359338551 rs773151368 |
1076 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1169731112 CA359338534 |
1077 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1169731112 CA359338531 |
1077 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1426653546 CA359338511 |
1078 | W>* | No |
ClinGen gnomAD |
|
|
rs988186391 CA115786100 |
1079 | L>F | No |
ClinGen TOPMed |
|
|
rs769791099 CA3217228 |
1080 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1427406017 CA359338446 |
1082 | P>S | No |
ClinGen TOPMed |
|
|
CA359338433 rs1330382398 |
1083 | L>R | No |
ClinGen TOPMed |
|
|
rs1283102402 CA359337653 |
1088 | L>Q | No |
ClinGen gnomAD |
|
|
CA359337645 rs1212138803 |
1089 | Q>P | No |
ClinGen gnomAD |
|
|
rs1311212433 COSM3429371 CA359337568 |
1095 | R>Q | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1241512832 CA359337557 |
1096 | Q>R | No |
ClinGen gnomAD |
|
|
CA115784851 rs748009983 |
1102 | P>A | No |
ClinGen gnomAD |
|
|
CA3217212 rs762765224 |
1102 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359337491 rs748009983 |
1102 | P>S | No |
ClinGen gnomAD |
|
|
CA359337484 rs1313414655 |
1103 | V>L | No |
ClinGen gnomAD |
|
|
rs1434023676 CA359337431 |
1107 | L>V | No |
ClinGen gnomAD |
|
|
rs1373461212 CA359337422 |
1108 | T>A | No |
ClinGen gnomAD |
|
|
CA359337405 rs1309686825 |
1109 | E>A | No |
ClinGen TOPMed |
|
|
CA359337398 rs1346753359 |
1110 | F>L | No |
ClinGen TOPMed |
|
|
CA3217210 rs769711908 |
1113 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs776736153 CA3217208 |
1114 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748062041 CA3217209 |
1114 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1115 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1117 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1179152066 CA359337306 |
1117 | I>T | No |
ClinGen gnomAD |
|
|
CA359337242 rs1257594254 |
1122 | R>* | No |
ClinGen gnomAD |
|
|
rs1189337143 CA359337234 |
1123 | L>I | No |
ClinGen gnomAD |
|
|
rs747258421 CA3217206 |
1126 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1194666955 CA359337191 |
1127 | A>S | No |
ClinGen TOPMed |
|
|
CA359336790 rs1176489353 |
1153 | I>V | No |
ClinGen TOPMed |
|
|
rs768758777 CA3217190 |
1164 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA115783579 rs957421090 |
1167 | P>S | No |
ClinGen Ensembl |
|
|
CA359333702 rs1295265844 |
1178 | R>* | No |
ClinGen gnomAD |
|
|
CA359333700 rs1236254462 |
1178 | R>Q | No |
ClinGen gnomAD |
|
|
rs962964269 CA115775822 |
1182 | V>A | No |
ClinGen Ensembl |
|
| TCGA novel | 1186 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1371391530 CA359333554 |
1188 | A>G | No |
ClinGen gnomAD |
|
| TCGA novel | 1188 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3217176 rs758133428 COSM3941292 |
1191 | A>V | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA359333429 rs1228134367 |
1196 | M>V | No |
ClinGen TOPMed |
|
|
CA359333404 rs1289997268 |
1197 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA359333393 rs765041582 |
1197 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359333397 rs1561116631 |
1197 | Q>L | No |
ClinGen Ensembl |
|
|
rs1223477329 CA359333387 |
1198 | E>K | No |
ClinGen TOPMed |
|
|
rs761559414 CA3217173 |
1198 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359333348 rs1396439517 |
1200 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3217171 rs763962864 |
1201 | I>K | No |
ClinGen ExAC |
|
|
rs373505202 CA359333285 |
1203 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA359333265 rs1455857624 |
1205 | K>Q | No |
ClinGen gnomAD |
|
|
rs1396063384 CA359333256 |
1206 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1396063384 CA359333255 |
1206 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
rs772015765 CA3217168 |
1209 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA3217166 rs774665139 |
1210 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771452865 CA3217165 |
1211 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs899896220 CA115775702 |
1213 | R>H | No |
ClinGen gnomAD |
|
|
rs1318353668 CA359333107 |
1216 | T>S | No |
ClinGen TOPMed |
|
|
RCV000991210 CA359333076 rs1579987863 |
1219 | D>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA359332660 rs1195955783 |
1227 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3217141 rs776966464 |
1228 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs771619776 CA3217140 |
1230 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1486762375 CA359332591 |
1231 | D>V | No |
ClinGen gnomAD |
|
|
CA3217139 rs745328317 |
1233 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA359332566 rs745328317 |
1233 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA359332546 rs1326601694 |
1235 | E>D | No |
ClinGen gnomAD |
|
|
CA115774462 rs1047217743 |
1235 | E>G | No |
ClinGen Ensembl |
|
|
CA359332545 rs1174904836 |
1236 | Y>H | No |
ClinGen TOPMed |
|
|
rs1274614882 CA359332536 |
1237 | V>I | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 1241 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA359332496 rs1233387563 |
1242 | N>S | No |
ClinGen gnomAD |
|
|
rs1297917885 CA359332477 |
1245 | F>L | No |
ClinGen TOPMed |
|
|
CA3217138 rs778381047 |
1246 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA359332454 rs1312646207 |
1248 | R>Q | No |
ClinGen gnomAD |
|
|
CA359332389 rs2241337 CA359332388 |
1255 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1579982002 CA359332375 |
1257 | D>G | No |
ClinGen Ensembl |
|
|
CA3217122 rs747510301 |
1259 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3217120 rs770406706 |
1261 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA359332272 rs1441899184 |
1271 | T>K | No |
ClinGen gnomAD |
|
|
rs1002990980 CA115774348 |
1275 | E>V | No |
ClinGen TOPMed |
|
|
CA115772563 rs762537475 |
1287 | L>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1295 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1174002360 CA359331209 |
1296 | R>* | No |
ClinGen gnomAD |
|
|
rs76212062 CA3217098 |
1302 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs201161679 CA115772533 |
1303 | Y>F | No |
ClinGen Ensembl |
|
|
rs147180304 CA359331118 |
1309 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA359331104 rs780072424 |
1311 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758568440 CA3217094 |
1313 | K>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1320 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761417383 CA3217066 |
1322 | M>I | No |
ClinGen ExAC |
|
|
CA359330938 rs1195448237 |
1326 | M>T | No |
ClinGen Ensembl |
|
|
rs898901219 CA115771429 |
1326 | M>V | No |
ClinGen gnomAD |
|
|
CA115771405 rs867231759 |
1329 | L>I | No |
ClinGen Ensembl |
|
|
rs768578400 CA3217064 |
1330 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs761344878 CA3217043 |
1337 | M>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA115767570 rs1001404409 |
1338 | A>T | No |
ClinGen TOPMed |
|
|
CA359329569 COSM280610 rs561462275 |
1342 | R>W | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA359329529 rs1322275663 |
1345 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs771971658 CA3217038 |
1349 | R>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1350 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA359329427 rs896515701 |
1351 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs774306960 CA3217036 |
1359 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs1385429051 CA359329310 |
1360 | E>Q | No |
ClinGen TOPMed |
|
|
rs1389940639 CA359329276 |
1362 | Q>E | No |
ClinGen gnomAD |
|
|
rs533297896 CA115767512 |
1362 | Q>P | No |
ClinGen Ensembl |
|
|
CA359329255 rs1156535127 |
1363 | E>G | No |
ClinGen TOPMed |
|
|
rs61751196 CA115767510 |
1364 | R>G | No |
ClinGen Ensembl |
|
|
rs1383982217 CA359329239 |
1364 | R>S | No |
ClinGen TOPMed |
|
|
CA3217034 rs770922289 |
1365 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1380561359 CA359329213 |
1366 | P>R | No |
ClinGen TOPMed |
|
|
CA359329217 rs1188571005 |
1366 | P>S | No |
ClinGen TOPMed gnomAD |
|
| rs1561100337 | 1366 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs376216811 CA3217033 |
1367 | D>G | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 1368 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA115767455 rs1055527452 |
1369 | T>P | No |
ClinGen TOPMed |
|
|
CA359329144 rs1198277870 |
1371 | D>H | No |
ClinGen gnomAD |
|
|
CA359329133 rs1205776150 |
1372 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
CA359329135 rs1275027287 |
1372 | I>V | No |
ClinGen gnomAD |
No associated diseases with Q9NRR4
4 regional properties for Q9NRR4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Ribonuclease III domain | 876 - 1079 | IPR000999-1 |
| domain | Ribonuclease III domain | 1107 - 1254 | IPR000999-2 |
| domain | Double-stranded RNA-binding domain | 1260 - 1334 | IPR014720 |
| domain | RNase III, double-stranded RNA binding domain, animal | 1259 - 1332 | IPR044442 |
Functions
| Description | ||
|---|---|---|
| EC Number | 3.1.26.3 | Endoribonucleases producing 5'-phosphomonoesters |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| microprocessor complex | A protein complex that binds to heme and to pri-miRNAs, and is required for the formation of a pre-microRNA (pre-miRNA), the initial step of microRNA (miRNA) biogenesis. The complex is composed of the double-stranded-RNA-specific RNase Drosha (also called RNASEN) and the RNA-binding protein DGCR8 (heme-free or heme-bound forms). Within the complex, DGCR8 function as a molecular anchor necessary for the recognition of pri-miRNA at dsRNA-ssRNA junction and directs RNASEN/Drosha to cleave the 3' and 5' strands of a stem-loop to release hairpin-shaped pre-miRNAs. |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| postsynaptic density | An electron dense network of proteins within and adjacent to the postsynaptic membrane of an asymmetric, neuron-neuron synapse. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components. |
10 GO annotations of molecular function
| Name | Definition |
|---|---|
| DEAD/H-box RNA helicase binding | Binding to a DEAD/H-box RNA helicase. |
| double-stranded RNA binding | Binding to double-stranded RNA. |
| lipopolysaccharide binding | Binding to a lipopolysaccharide. |
| metal ion binding | Binding to a metal ion. |
| primary miRNA binding | Binding to a primary microRNA (pri-miRNA) transcript, an RNA molecule that is processed into a short hairpin-shaped structure called a pre-miRNA and finally into a functional miRNA. Both double-stranded and single-stranded regions of a pri-miRNA are required for binding. |
| protein homodimerization activity | Binding to an identical protein to form a homodimer. |
| R-SMAD binding | Binding to a receptor-regulated SMAD signaling protein. |
| ribonuclease III activity | Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| SMAD binding | Binding to a SMAD signaling protein. |
12 GO annotations of biological process
| Name | Definition |
|---|---|
| defense response to Gram-negative bacterium | Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism. |
| defense response to Gram-positive bacterium | Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism. |
| miRNA metabolic process | The chemical reactions and pathways involving miRNA, microRNA, a class of single-stranded RNA molecules of about 21-23 nucleotides in length, which regulates gene expression. |
| positive regulation of gene expression | Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). |
| pre-miRNA processing | A process involved in the conversion of a pre-microRNA transcript into a mature microRNA molecule. |
| primary miRNA processing | A process involved in the conversion of a primary microRNA transcript into a pre-microRNA molecule. |
| regulation of gene expression | Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). |
| regulation of inflammatory response | Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. |
| regulation of miRNA metabolic process | Any process that modulates the frequency, rate or extent of miRNA metabolic process. |
| regulation of regulatory T cell differentiation | Any process that modulates the frequency, rate or extent of differentiation of regulatory T cells. |
| RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. |
| rRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q5HZJ0 | Drosha | Ribonuclease 3 | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MMQGNTCHRM | SFHPGRGCPR | GRGGHGARPS | APSFRPQNLR | LLHPQQPPVQ | YQYEPPSAPS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| TTFSNSPAPN | FLPPRPDFVP | FPPPMPPSAQ | GPLPPCPIRP | PFPNHQMRHP | FPVPPCFPPM |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PPPMPCPNNP | PVPGAPPGQG | TFPFMMPPPS | MPHPPPPPVM | PQQVNYQYPP | GYSHHNFPPP |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SFNSFQNNPS | SFLPSANNSS | SPHFRHLPPY | PLPKAPSERR | SPERLKHYDD | HRHRDHSHGR |
| 250 | 260 | 270 | 280 | 290 | 300 |
| GERHRSLDRR | ERGRSPDRRR | QDSRYRSDYD | RGRTPSRHRS | YERSRERERE | RHRHRDNRRS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| PSLERSYKKE | YKRSGRSYGL | SVVPEPAGCT | PELPGEIIKN | TDSWAPPLEI | VNHRSPSREK |
| 370 | 380 | 390 | 400 | 410 | 420 |
| KRARWEEEKD | RWSDNQSSGK | DKNYTSIKEK | EPEETMPDKN | EEEEEELLKP | VWIRCTHSEN |
| 430 | 440 | 450 | 460 | 470 | 480 |
| YYSSDPMDQV | GDSTVVGTSR | LRDLYDKFEE | ELGSRQEKAK | AARPPWEPPK | TKLDEDLESS |
| 490 | 500 | 510 | 520 | 530 | 540 |
| SESECESDED | STCSSSSDSE | VFDVIAEIKR | KKAHPDRLHD | ELWYNDPGQM | NDGPLCKCSA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| KARRTGIRHS | IYPGEEAIKP | CRPMTNNAGR | LFHYRITVSP | PTNFLTDRPT | VIEYDDHEYI |
| 610 | 620 | 630 | 640 | 650 | 660 |
| FEGFSMFAHA | PLTNIPLCKV | IRFNIDYTIH | FIEEMMPENF | CVKGLELFSL | FLFRDILELY |
| 670 | 680 | 690 | 700 | 710 | 720 |
| DWNLKGPLFE | DSPPCCPRFH | FMPRFVRFLP | DGGKEVLSMH | QILLYLLRCS | KALVPEEEIA |
| 730 | 740 | 750 | 760 | 770 | 780 |
| NMLQWEELEW | QKYAEECKGM | IVTNPGTKPS | SVRIDQLDRE | QFNPDVITFP | IIVHFGIRPA |
| 790 | 800 | 810 | 820 | 830 | 840 |
| QLSYAGDPQY | QKLWKSYVKL | RHLLANSPKV | KQTDKQKLAQ | REEALQKIRQ | KNTMRREVTV |
| 850 | 860 | 870 | 880 | 890 | 900 |
| ELSSQGFWKT | GIRSDVCQHA | MMLPVLTHHI | RYHQCLMHLD | KLIGYTFQDR | CLLQLAMTHP |
| 910 | 920 | 930 | 940 | 950 | 960 |
| SHHLNFGMNP | DHARNSLSNC | GIRQPKYGDR | KVHHMHMRKK | GINTLINIMS | RLGQDDPTPS |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| RINHNERLEF | LGDAVVEFLT | SVHLYYLFPS | LEEGGLATYR | TAIVQNQHLA | MLAKKLELDR |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| FMLYAHGPDL | CRESDLRHAM | ANCFEALIGA | VYLEGSLEEA | KQLFGRLLFN | DPDLREVWLN |
| 1090 | 1100 | 1110 | 1120 | 1130 | 1140 |
| YPLHPLQLQE | PNTDRQLIET | SPVLQKLTEF | EEAIGVIFTH | VRLLARAFTL | RTVGFNHLTL |
| 1150 | 1160 | 1170 | 1180 | 1190 | 1200 |
| GHNQRMEFLG | DSIMQLVATE | YLFIHFPDHH | EGHLTLLRSS | LVNNRTQAKV | AEELGMQEYA |
| 1210 | 1220 | 1230 | 1240 | 1250 | 1260 |
| ITNDKTKRPV | ALRTKTLADL | LESFIAALYI | DKDLEYVHTF | MNVCFFPRLK | EFILNQDWND |
| 1270 | 1280 | 1290 | 1300 | 1310 | 1320 |
| PKSQLQQCCL | TLRTEGKEPD | IPLYKTLQTV | GPSHARTYTV | AVYFKGERIG | CGKGPSIQQA |
| 1330 | 1340 | 1350 | 1360 | 1370 | |
| EMGAAMDALE | KYNFPQMAHQ | KRFIERKYRQ | ELKEMRWERE | HQEREPDETE | DIKK |