Q9NPF5
Gene name |
DMAP1 (KIAA1425) |
Protein name |
DNA methyltransferase 1-associated protein 1 |
Names |
DNMAP1, DNMT1-associated protein 1 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:55929 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
3 structures for Q9NPF5
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 3HM5 | X-ray | 180 A | A | 121-212 | PDB |
| 4IEJ | X-ray | 145 A | A | 121-212 | PDB |
| AF-Q9NPF5-F1 | Predicted | AlphaFoldDB |
308 variants for Q9NPF5
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA818673 RCV000993990 RCV002549847 rs150290470 |
283 | R>H | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs374557407 CA21718073 |
2 | A>T | No |
ClinGen ESP gnomAD |
|
|
rs1398848350 CA340055608 |
3 | T>A | No |
ClinGen gnomAD |
|
| TCGA novel | 3 | T>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA340055642 rs1328595666 |
4 | G>D | No |
ClinGen gnomAD |
|
|
rs1368897971 CA340055671 |
5 | A>V | No |
ClinGen gnomAD |
|
|
rs1193847634 CA340055700 |
7 | V>I | No |
ClinGen gnomAD |
|
|
rs1299594681 CA340055723 |
8 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA340055804 rs1309508833 |
12 | E>K | No |
ClinGen gnomAD |
|
|
rs867078728 CA21718080 |
14 | G>E | No |
ClinGen gnomAD |
|
|
rs1028034898 CA21718077 |
14 | G>R | No |
ClinGen TOPMed |
|
|
rs1257514046 CA340055881 |
15 | G>V | No |
ClinGen gnomAD |
|
|
rs1316219346 CA340055892 |
16 | P>A | No |
ClinGen gnomAD |
|
|
rs1215625045 CA340055916 |
17 | E>G | No |
ClinGen gnomAD |
|
|
rs866800708 CA21718083 |
18 | G>W | No |
ClinGen Ensembl |
|
|
rs765353094 CA818360 |
20 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs765353094 CA340055971 |
20 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA340055980 rs1264937113 |
21 | A>T | No |
ClinGen gnomAD |
|
|
CA340055990 rs1478603547 |
21 | A>V | No |
ClinGen gnomAD |
|
|
CA818362 rs762931520 |
27 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA818363 rs766424456 |
29 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA340056220 rs868865806 |
33 | P>L | No |
ClinGen TOPMed |
|
|
rs868865806 CA21718094 |
33 | P>Q | No |
ClinGen TOPMed |
|
|
rs1351009699 CA340056211 |
33 | P>S | No |
ClinGen gnomAD |
|
|
rs1249757858 CA340056271 |
35 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs189226255 CA21718095 |
35 | K>R | No |
ClinGen 1000Genomes gnomAD |
|
|
CA21718278 rs1040436915 |
38 | S>C | No |
ClinGen TOPMed |
|
| TCGA novel | 38 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1378787319 CA340056897 |
41 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA340056902 rs1253691706 |
42 | S>F | No |
ClinGen TOPMed |
|
|
CA340056906 rs1557753738 |
43 | E>K | No |
ClinGen Ensembl |
|
|
CA818386 rs752746278 |
44 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA340056927 rs1333410656 |
46 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA340056932 rs1557753756 |
47 | F>S | No |
ClinGen Ensembl |
|
|
rs753577172 CA818390 |
57 | V>D | No |
ClinGen ExAC gnomAD |
|
|
rs778558636 CA818392 |
58 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1557753792 CA340057036 |
62 | Y>C | No |
ClinGen Ensembl |
|
|
CA818440 rs757848536 |
67 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA21718450 rs908647040 |
70 | P>R | No |
ClinGen Ensembl |
|
|
CA340057356 rs1186899466 |
76 | T>S | No |
ClinGen gnomAD |
|
|
rs1384574968 CA340057374 |
77 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1325738701 CA340057385 |
78 | Q>* | No |
ClinGen gnomAD |
|
|
rs940092247 CA340057438 |
80 | Y>* | No |
ClinGen gnomAD |
|
| TCGA novel | 81 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA818443 rs151272574 |
81 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA340057570 rs1380616645 |
86 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 86 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA340057630 rs1347980099 |
89 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA340057723 rs1166868038 |
92 | V>A | No |
ClinGen TOPMed |
|
|
CA340057714 rs1166868038 |
92 | V>G | No |
ClinGen TOPMed |
|
|
rs761588961 COSM4144007 COSM4144006 CA818448 |
93 | R>Q | thyroid [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs34697342 COSM244058 CA340057742 |
93 | R>W | prostate [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA340057779 rs1381256649 |
94 | P>S | No |
ClinGen gnomAD |
|
|
CA818450 rs772943430 |
97 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 101 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA818453 rs765987110 |
102 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs372962895 CA818454 |
103 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1241301800 CA340058138 |
105 | R>C | No |
ClinGen gnomAD |
|
|
rs752252650 CA818456 |
105 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1248927467 CA340058182 |
106 | K>R | No |
ClinGen TOPMed |
|
|
rs750793953 CA818459 |
108 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1032104702 CA21718502 |
108 | G>R | No |
ClinGen TOPMed |
|
|
rs758872029 CA818460 |
109 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs780318980 CA818461 |
113 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs145929825 CA818462 |
116 | R>C | No |
ClinGen ESP ExAC gnomAD |
|
|
rs755233632 CA818463 |
116 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA21718521 rs892222427 |
117 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs892222427 CA21718518 |
117 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA340058455 rs1376777307 |
118 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1025142402 CA21718534 |
120 | E>D | No |
ClinGen TOPMed |
|
|
rs891533101 CA21718531 |
120 | E>K | No |
ClinGen TOPMed |
|
|
rs749079273 CA818468 |
124 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA340058573 rs1390337174 |
124 | Y>H | No |
ClinGen TOPMed |
|
|
rs371298787 CA818471 |
128 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371298787 CA340058664 |
128 | R>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA818473 rs774811886 |
130 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1572030440 CA340059612 |
132 | T>A | No |
ClinGen Ensembl |
|
|
CA818545 rs751370692 |
136 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA818546 COSM3689720 COSM2171594 rs145830461 |
137 | V>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA818547 rs145830461 |
137 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA21719625 rs1019636182 |
138 | Y>C | No |
ClinGen TOPMed |
|
|
CA818548 rs747781202 |
139 | S>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 140 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA818550 rs376952422 |
141 | Q>E | No |
ClinGen ESP ExAC gnomAD |
|
|
CA340059875 rs772541742 |
143 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA818554 rs747366744 |
147 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA340059992 rs1308089686 |
148 | H>P | No |
ClinGen gnomAD |
|
|
rs769065111 CA818555 |
148 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765409416 CA340060022 |
149 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA21719639 rs779646178 |
149 | D>G | No |
ClinGen Ensembl |
|
|
rs762027853 CA818557 COSM909992 |
149 | D>N | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1324436132 CA340060040 |
151 | A>T | No |
ClinGen gnomAD |
|
|
rs766415972 CA818561 |
155 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA818560 rs763166810 |
155 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1572030584 CA340061464 |
158 | D>A | No |
ClinGen Ensembl |
|
|
rs1572030589 CA340061473 |
159 | H>P | No |
ClinGen Ensembl |
|
|
CA340061477 rs1557755749 |
160 | L>F | No |
ClinGen Ensembl |
|
|
rs767278967 CA818565 |
161 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA340061493 rs1572030624 |
162 | D>A | No |
ClinGen Ensembl |
|
|
rs1430944727 CA340061491 |
162 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1430944727 CA340061490 |
162 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs368742800 CA818567 |
165 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA818568 rs755747117 |
165 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs748797447 CA818570 |
166 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs201828316 CA818571 |
166 | R>H | Variant assessed as Somatic; 9.24e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs372548904 CA818572 |
167 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA340061524 rs1219566120 |
167 | F>S | No |
ClinGen TOPMed |
|
|
rs199594206 CA818573 |
168 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs898444637 CA21719669 |
168 | D>N | No |
ClinGen TOPMed |
|
|
rs1572030682 CA340061540 |
170 | R>C | No |
ClinGen Ensembl |
|
|
CA818574 COSM1560600 rs769155056 |
170 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs781579736 CA818576 |
173 | V>D | No |
ClinGen ExAC gnomAD |
|
|
CA340061564 rs1401022734 |
174 | I>V | No |
ClinGen TOPMed |
|
|
rs1425048893 CA340061573 |
175 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs748510377 CA818577 |
176 | D>G | No |
ClinGen ExAC TOPMed |
|
|
CA340061585 rs1251801769 |
177 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs192276687 CA818578 |
177 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs773374215 CA818579 |
179 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1193824902 CA340061606 |
180 | H>P | No |
ClinGen gnomAD |
|
|
CA818580 rs144462164 |
180 | H>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1461370877 CA340061614 |
181 | Q>R | No |
ClinGen TOPMed |
|
|
rs1198078367 CA340061641 |
184 | K>N | No |
ClinGen gnomAD |
|
|
CA818602 rs772018540 |
185 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA818603 rs775360259 |
186 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA21719796 rs141586055 |
186 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA |
|
rs1389765793 CA340061692 |
190 | D>N | No |
ClinGen TOPMed |
|
|
CA818604 rs760508897 |
191 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA818606 rs763741160 |
193 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA818605 rs763741160 |
193 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs761415756 CA818607 |
194 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA21719807 rs1043259224 |
194 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA818608 rs764893235 |
196 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA818609 rs749903843 |
196 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA21719818 rs747268999 |
197 | H>Y | No |
ClinGen gnomAD |
|
|
rs757912210 CA818611 |
198 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA818612 rs140090594 |
201 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs544496296 CA818613 |
204 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA340062043 rs1437324167 |
205 | V>A | No |
ClinGen TOPMed |
|
|
CA340062036 rs778241048 |
205 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778241048 CA818615 |
205 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749690011 CA818616 |
206 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1410462270 CA340062052 |
206 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs757527244 CA818617 |
207 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA21719834 rs147271334 |
207 | A>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs757527244 CA340062077 |
207 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA340062094 COSM122594 rs1470991729 |
208 | V>L | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs779322512 COSM1162668 CA818618 |
209 | P>R | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA818619 rs376072861 |
215 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA818621 rs775655920 |
216 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
CA340062244 rs1223929711 |
217 | V>L | No |
ClinGen gnomAD |
|
|
CA340062271 rs1260392099 |
219 | D>N | No |
ClinGen TOPMed |
|
|
CA818622 rs746856748 |
221 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1311346764 CA340062314 |
222 | H>Y | No |
ClinGen TOPMed |
|
|
rs1012570208 CA21719857 COSM909996 |
223 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
COSM3400831 CA818624 COSM3400832 rs776362349 |
224 | R>* | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed |
|
CA818626 rs192410775 |
224 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA21719869 rs192410775 |
224 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA818627 rs764864892 |
225 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA340062359 rs1461219589 |
225 | R>W | No |
ClinGen gnomAD |
|
|
rs762679185 CA818629 |
226 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs772907285 CA818628 |
226 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs1178719472 CA340062424 |
229 | Q>* | No |
ClinGen TOPMed |
|
|
rs1406039649 CA340062444 |
231 | E>Q | No |
ClinGen gnomAD |
|
|
CA340062453 rs1481484077 |
232 | R>C | No |
ClinGen gnomAD |
|
|
rs376305922 CA818630 |
232 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA340062475 rs1469178705 |
235 | N>K | No |
ClinGen gnomAD |
|
|
CA818631 rs751108364 |
235 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA21719890 rs931241626 COSM909997 |
236 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs368524464 CA818632 |
236 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA340062491 rs1442633861 |
238 | P>L | No |
ClinGen gnomAD |
|
|
rs919569333 CA21719987 |
241 | V>A | No |
ClinGen TOPMed |
|
|
rs766074536 CA818650 |
241 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA818652 rs147853070 |
243 | E>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA340062629 rs1223590282 |
246 | Y>* | No |
ClinGen gnomAD |
|
|
rs762427205 CA818656 |
248 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA340062662 rs1243798144 COSM1203777 |
252 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA340062664 rs1557756288 |
252 | R>P | No |
ClinGen Ensembl |
|
| TCGA novel | 253 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs141006092 CA21720014 |
255 | E>D | No |
ClinGen ESP TOPMed |
|
|
CA340062696 rs1041312090 |
257 | R>P | No |
ClinGen TOPMed |
|
|
CA21720021 rs1041312090 |
257 | R>Q | No |
ClinGen TOPMed |
|
|
rs758501470 CA818660 |
257 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA340062723 rs1401567908 |
261 | R>Q | No |
ClinGen TOPMed |
|
|
CA340062721 rs138578742 |
261 | R>W | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA818663 rs751562389 |
264 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751562389 CA21720034 |
264 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA340062756 rs1384602226 |
266 | Q>* | No |
ClinGen gnomAD |
|
| TCGA novel | 267 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 268 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1327544420 CA340062796 |
272 | I>L | No |
ClinGen gnomAD |
|
|
CA818664 rs755107516 |
274 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA818667 rs769752569 |
277 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA818670 rs770456146 |
282 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749154138 CA818669 |
282 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs759108052 CA818672 |
283 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA21720062 rs948379587 |
284 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA340062884 rs762372274 |
286 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs762372274 CA818675 |
286 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs765869837 CA818676 |
287 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1031879757 CA21720074 |
288 | A>S | No |
ClinGen TOPMed |
|
|
CA340062933 rs1557756446 |
294 | P>T | No |
ClinGen Ensembl |
|
|
rs766505833 CA340062975 |
299 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA818679 rs766505833 |
299 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs565348656 CA818681 |
302 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1376394704 CA340063022 |
305 | P>A | No |
ClinGen gnomAD |
|
|
rs767772686 CA818700 |
310 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1168807004 CA340063091 |
311 | K>R | No |
ClinGen gnomAD |
|
|
COSM1203778 rs756249698 CA818702 |
313 | P>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs369461221 CA818701 |
313 | P>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1305184282 CA340063149 |
315 | F>I | No |
ClinGen gnomAD |
|
|
rs763921450 CA818703 |
315 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA340063160 rs1404392079 |
316 | K>R | No |
ClinGen gnomAD |
|
|
CA21720182 rs996136773 |
321 | T>A | No |
ClinGen Ensembl |
|
|
rs753755077 CA340063216 |
321 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753755077 CA818704 |
321 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1229356489 CA340063240 |
323 | R>Q | No |
ClinGen gnomAD |
|
|
CA21720190 rs866498390 |
324 | S>C | No |
ClinGen Ensembl |
|
|
rs757150361 CA818705 |
325 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
CA340063290 rs1270561292 |
326 | R>Q | No |
ClinGen gnomAD |
|
|
CA818707 rs745682989 |
326 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs12760076 CA21720431 |
327 | M>K | No |
ClinGen Ensembl |
|
|
CA21720425 rs12755972 |
327 | M>L | No |
ClinGen Ensembl |
|
|
rs1431859024 CA340063466 |
329 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs754618278 CA818729 |
336 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs747659793 CA818731 |
337 | K>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 337 | K>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771433988 CA818732 |
337 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA340063784 rs1311202953 |
342 | E>D | No |
ClinGen gnomAD |
|
|
CA340063811 rs1310124218 |
343 | Q>H | No |
ClinGen gnomAD |
|
|
CA818757 rs138593911 |
353 | S>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs769937212 CA818760 |
355 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA340064202 rs1173638863 |
357 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs999952777 CA21720583 |
358 | E>K | No |
ClinGen gnomAD |
|
|
CA818765 rs759314123 |
363 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs116305257 CA818764 |
363 | M>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 368 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA818766 rs767182825 COSM1342961 |
368 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs189650822 CA818768 CA340064535 |
370 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs777229352 CA818769 |
372 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1200185487 CA340064631 |
376 | E>K | No |
ClinGen gnomAD |
|
|
rs768962026 CA818774 |
378 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1242721814 CA340064791 |
383 | N>S | No |
ClinGen TOPMed |
|
|
CA21720622 rs951792544 |
385 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA21720613 rs763717827 |
385 | E>K | No |
ClinGen gnomAD |
|
|
CA818776 rs748252842 |
386 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs1331036229 CA340065009 COSM910001 |
392 | R>Q | endometrium Variant assessed as Somatic; 4.708e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA340065003 rs1287693325 |
392 | R>W | No |
ClinGen TOPMed |
|
|
CA340065052 rs1435036087 |
394 | R>C | No |
ClinGen gnomAD |
|
|
CA818778 rs773404079 |
394 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs749417435 CA818779 |
395 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770986672 CA818780 CA21720638 |
395 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA21720644 rs376830920 |
396 | E>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA340065130 rs1361797833 |
397 | A>P | No |
ClinGen gnomAD |
|
|
CA340065161 rs774210173 |
399 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs774210173 CA818783 |
399 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1435165317 COSM1342962 CA340065185 |
400 | R>Q | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs759526565 CA340065179 |
400 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs775390346 CA818786 |
401 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA340065198 rs1243744982 |
401 | A>T | No |
ClinGen gnomAD |
|
|
rs760275631 CA818787 |
402 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1187638597 CA340065222 |
402 | G>S | No |
ClinGen gnomAD |
|
|
rs760275631 CA818788 |
402 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA340065270 rs1389462610 |
405 | G>V | No |
ClinGen gnomAD |
|
|
CA818792 rs143355210 |
406 | G>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs143355210 CA818791 |
406 | G>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs755514530 CA818793 |
407 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs755514530 CA340065278 |
407 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1434856829 CA340065290 |
409 | T>I | No |
ClinGen gnomAD |
|
|
rs140268980 CA818794 |
411 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs15001 CA21720687 |
413 | G>A | No |
ClinGen Ensembl |
|
|
CA340065371 rs1572034994 |
415 | G>A | No |
ClinGen Ensembl |
|
|
rs201200802 CA818797 |
416 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA818799 rs143076012 |
417 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA818801 rs774490712 |
418 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA818802 rs745749426 |
421 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA340065463 rs1244898852 |
422 | A>G | No |
ClinGen TOPMed |
|
|
CA340065457 rs1367503649 |
422 | A>T | No |
ClinGen gnomAD |
|
|
CA818804 rs775128617 |
423 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs760506719 CA818805 |
424 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs200328989 CA818806 |
426 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA818808 rs761468663 |
427 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs151153383 CA818809 |
430 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA340065571 rs1333791472 |
431 | D>E | No |
ClinGen gnomAD |
|
|
rs749981061 CA818810 |
431 | D>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 434 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs180793137 CA818813 |
437 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs768107239 CA818812 |
437 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1328568395 CA340065669 |
438 | D>G | No |
ClinGen gnomAD |
|
|
rs1304999773 CA340065688 |
439 | V>A | No |
ClinGen TOPMed |
|
|
rs756603966 CA818814 |
439 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA340065693 rs1266146080 |
440 | V>L | No |
ClinGen gnomAD |
|
|
rs560829214 CA818815 |
442 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA818817 rs757528262 |
444 | L>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 444 | L>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA818818 rs778812636 |
445 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs1157636623 CA340065778 |
446 | P>L | No |
ClinGen gnomAD |
|
|
rs771876966 CA818820 |
447 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA818844 rs768613560 |
451 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA818846 rs748014489 |
452 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA818845 rs780918219 |
452 | R>W | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 453 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA21721044 rs200555872 |
456 | S>C | No |
ClinGen Ensembl |
|
|
rs563606391 CA818850 |
461 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs774025138 CA818851 |
463 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1201187416 CA340067034 |
465 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs761211394 CA818852 |
467 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA522527952 rs1292928166 |
468 | P>L | No |
ClinGen TOPMed |
|
|
CA21721079 rs952133390 |
468 | P>W | No |
ClinGen TOPMed |
No associated diseases with Q9NPF5
5 regional properties for Q9NPF5
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | ABC transporter-like, ATP-binding domain | 2 - 241 | IPR003439 |
| domain | AAA+ ATPase domain | 30 - 218 | IPR003593 |
| conserved_site | ABC transporter-like, conserved site | 141 - 155 | IPR017871 |
| domain | NIL domain | 265 - 340 | IPR018449 |
| domain | Methionine import ATP-binding protein MetN, ATP-binding domain | 1 - 233 | IPR041701 |
8 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| NuA4 histone acetyltransferase complex | A complex having histone acetylase activity on chromatin, as well as ATPase, DNA helicase and structural DNA binding activities. The complex is thought to be involved in double-strand DNA break repair. Subunits of the human complex include HTATIP/TIP60, TRRAP, RUVBL1, BUVBL2, beta-actin and BAF53/ACTL6A. In yeast, the complex has 13 subunits, including the catalytic subunit Esa1 (homologous to human Tip60). |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleosome | A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| replication fork | The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes. |
| Swr1 complex | A multisubunit protein complex that is involved in chromatin remodeling. It is required for the incorporation of the histone variant H2AZ into chromatin. In S. cerevisiae, the complex contains Swr1p, a Swi2/Snf2-related ATPase, and 12 additional subunits. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| RNA polymerase II-specific DNA-binding transcription factor binding | Binding to a sequence-specific DNA binding RNA polymerase II transcription factor, any of the factors that interact selectively and non-covalently with a specific DNA sequence in order to modulate transcription. |
| transcription corepressor activity | A transcription coregulator activity that represses or decreases the transcription of specific gene sets via binding to a DNA-bound DNA-binding transcription factor, either on its own or as part of a complex. Corepressors often act by altering chromatin structure and modifications. For example, one class of transcription corepressors modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators. |
16 GO annotations of biological process
| Name | Definition |
|---|---|
| DNA methylation | The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine. |
| DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. |
| histone acetylation | The modification of a histone by the addition of an acetyl group. |
| histone exchange | The replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits. |
| histone H2A acetylation | The modification of histone H2A by the addition of an acetyl group. |
| histone H4 acetylation | The modification of histone H4 by the addition of an acetyl group. |
| negative regulation of DNA-templated transcription | Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |
| negative regulation of transcription by RNA polymerase II | Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II. |
| positive regulation of DNA-templated transcription | Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription. |
| positive regulation of double-strand break repair via homologous recombination | Any process that activates or increases the frequency, rate or extent of double-strand break repair via homologous recombination. |
| positive regulation of protein import into nucleus | Any process that activates or increases the frequency, rate or extent of movement of proteins from the cytoplasm into the nucleus. |
| regulation of apoptotic process | Any process that modulates the occurrence or rate of cell death by apoptotic process. |
| regulation of cell cycle | Any process that modulates the rate or extent of progression through the cell cycle. |
| regulation of DNA-templated transcription | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
| regulation of double-strand break repair | Any process that modulates the frequency, rate or extent of double-strand break repair. |
| response to ethanol | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9JI44 | Dmap1 | DNA methyltransferase 1-associated protein 1 | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MATGADVRDI | LELGGPEGDA | ASGTISKKDI | INPDKKKSKK | SSETLTFKRP | EGMHREVYAL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LYSDKKDAPP | LLPSDTGQGY | RTVKAKLGSK | KVRPWKWMPF | TNPARKDGAM | FFHWRRAAEE |
| 130 | 140 | 150 | 160 | 170 | 180 |
| GKDYPFARFN | KTVQVPVYSE | QEYQLYLHDD | AWTKAETDHL | FDLSRRFDLR | FVVIHDRYDH |
| 190 | 200 | 210 | 220 | 230 | 240 |
| QQFKKRSVED | LKERYYHICA | KLANVRAVPG | TDLKIPVFDA | GHERRRKEQL | ERLYNRTPEQ |
| 250 | 260 | 270 | 280 | 290 | 300 |
| VAEEEYLLQE | LRKIEARKKE | REKRSQDLQK | LITAADTTAE | QRRTERKAPK | KKLPQKKEAE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| KPAVPETAGI | KFPDFKSAGV | TLRSQRMKLP | SSVGQKKIKA | LEQMLLELGV | ELSPTPTEEL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| VHMFNELRSD | LVLLYELKQA | CANCEYELQM | LRHRHEALAR | AGVLGGPATP | ASGPGPASAE |
| 430 | 440 | 450 | 460 | ||
| PAVTEPGLGP | DPKDTIIDVV | GAPLTPNSRK | RRESASSSSS | VKKAKKP |