Q9LUQ6
Gene name |
RPL19B (At3g16780, MGL6.25) |
Protein name |
60S ribosomal protein L19-2 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT3G16780 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9LUQ6
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9LUQ6-F1 | Predicted | AlphaFoldDB |
7 variants for Q9LUQ6
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH00327806 | 6 | I>L | No | 1000Genomes | |
| ENSVATH13932649 | 11 | A>P | No | 1000Genomes | |
| ENSVATH10726763 | 30 | G>S | No | 1000Genomes | |
| tmp_3_5709717_A_T | 92 | K>M | No | 1000Genomes | |
| tmp_3_5709727_G_C | 95 | W>C | No | 1000Genomes | |
| ENSVATH10726798 | 141 | S>N | No | 1000Genomes | |
| ENSVATH02153857 | 195 | G>R | No | 1000Genomes |
No associated diseases with Q9LUQ6
6 regional properties for Q9LUQ6
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | HD/PDEase domain | 335 - 451 | IPR003607 |
| domain | K Homology domain | 211 - 278 | IPR004087 |
| domain | K Homology domain, type 1 | 217 - 273 | IPR004088 |
| domain | HD domain | 339 - 432 | IPR006674 |
| domain | HDIG domain | 335 - 412 | IPR006675 |
| domain | Ribonuclease Y, N-terminal | 16 - 208 | IPR022711 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| cytosolic large ribosomal subunit | The large subunit of a ribosome located in the cytosol. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| structural constituent of ribosome | The action of a molecule that contributes to the structural integrity of the ribosome. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| translation | The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| O02639 | rpl-19 | 60S ribosomal protein L19 | Caenorhabditis elegans | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MVSLKIQKRL | AASVMKCGKG | KVWLDPNESG | DISMANSRQN | IRKLVKDGFI | IRKPTKIHSR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SRARALNEAK | RKGRHSGYGK | RKGTREARLP | TKILWMRRMR | VLRRFLSKYR | ESKKIDRHMY |
| 130 | 140 | 150 | 160 | 170 | 180 |
| HDMYMKVKGN | VFKNKRVLME | SIHKMKAEKA | REKTLADQFE | AKRIKNKASR | ERKFARREER |
| 190 | 200 | ||||
| LAQGPGGGET | TTPAGAPQQP | EVTKKKSKK |