Q9LFW3
Gene name |
COBL4 (At5g15630, F14F8_10) |
Protein name |
COBRA-like protein 4 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G15630 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9LFW3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9LFW3-F1 | Predicted | AlphaFoldDB |
19 variants for Q9LFW3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH03059784 | 3 | L>V | No | 1000Genomes | |
| ENSVATH06972345 | 7 | F>I | No | 1000Genomes | |
| ENSVATH10767015 | 7 | F>Y | No | 1000Genomes | |
| tmp_5_5084865_C_G | 8 | C>W | No | 1000Genomes | |
| tmp_5_5084866_T_C | 9 | F>L | No | 1000Genomes | |
| ENSVATH06972346 | 10 | F>L | No | 1000Genomes | |
| tmp_5_5085039_G_A | 42 | D>N | No | 1000Genomes | |
| tmp_5_5085496_C_T | 164 | T>I | No | 1000Genomes | |
| tmp_5_5085555_G_A | 184 | V>I | No | 1000Genomes | |
| tmp_5_5085568_C_A | 188 | T>N | No | 1000Genomes | |
| tmp_5_5085738_T_C | 219 | V>A | No | 1000Genomes | |
| ENSVATH06972368 | 236 | A>S | No | 1000Genomes | |
| ENSVATH10767023 | 266 | T>S | No | 1000Genomes | |
| tmp_5_5086119_A_G | 320 | N>D | No | 1000Genomes | |
| tmp_5_5086351_G_A | 368 | V>I | No | 1000Genomes | |
| ENSVATH06972383 | 412 | Q>K | No | 1000Genomes | |
| ENSVATH06972385 | 414 | N>K | No | 1000Genomes | |
| tmp_5_5086493_T_C | 415 | F>S | No | 1000Genomes | |
| ENSVATH06972387 | 418 | F>L | No | 1000Genomes |
No associated diseases with Q9LFW3
No regional properties for Q9LFW3
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q9LFW3 | |||
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| anchored component of membrane | The component of a membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping. |
| anchored component of plasma membrane | The component of the plasma membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group, that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping. |
| plant-type vacuole | A closed structure that is completely surrounded by a unit membrane, contains liquid, and retains the same shape regardless of cell cycle phase. An example of this structure is found in Arabidopsis thaliana. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| cellulose microfibril organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cellulose microfibril, any of the cellulose structures laid down in orthogonal layers in a plant cell wall. |
| plant-type cell wall cellulose biosynthetic process | The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, as part of the organization and biogenesis of the cell wall. |
| plant-type secondary cell wall biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall after cell expansion is complete. An example of this is found in Arabidopsis thaliana. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q8L8Q7 | COBL2 | COBRA-like protein 2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MRLLFSFCFF | FFMIIFTATA | YDPLDPSGNI | TIKWDIMSWT | ADGYVATVTM | NNFQIYRHIQ |
| 70 | 80 | 90 | 100 | 110 | 120 |
| NPGWTLGWTW | AKKEVIWSMV | GAQTTEQGDC | SKFKGNVPHC | CKKTPTVVDL | LPGVPYNQQF |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SNCCKGGVIG | AWGQDPSAAV | SQFQVSAGLA | GTTNKTVKLP | KNFTLLGPGP | GYTCGPAKIV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| PSTVFLTTDK | RRKTQALMTW | NVTCTYSQFL | ARKHPSCCVS | FSSFYNDTIT | PCPSCACGCE |
| 250 | 260 | 270 | 280 | 290 | 300 |
| NKKSCVKADS | KILTKKGLNT | PKKDNTPLLQ | CTHHMCPVRV | HWHVKTNYKD | YWRVKIAITN |
| 310 | 320 | 330 | 340 | 350 | 360 |
| FNYRMNHTLW | TLAIQHPNLN | NVTQVFSFDY | KPVSPYGSIN | DTGMFYGTKF | YNDLLMEAGP |
| 370 | 380 | 390 | 400 | 410 | 420 |
| SGNVQSEVLL | QKDQKTFTFK | QGWAFPRKVY | FNGDECMLPP | PDSYPFLPNS | AQGNFASFSL |
| 430 | |||||
| TILLLLFISI | W |