Q9H211
Gene name |
CDT1 |
Protein name |
DNA replication factor Cdt1 |
Names |
Double parked homolog, DUP |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:81620 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
4 structures for Q9H211
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 2LE8 | NMR | - | B | 413-440 | PDB |
| 2WVR | X-ray | 330 A | C | 1-546 | PDB |
| 6QCG | X-ray | 340 A | G/H/I/J/K/L | 1-14 | PDB |
| AF-Q9H211-F1 | Predicted | AlphaFoldDB |
712 variants for Q9H211
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV000501513 rs767926757 RCV002524165 RCV001857081 CA8233502 |
58 | G>R | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000023458 CA129283 rs387906918 VAR_065488 |
66 | A>T | Meier-gorlin syndrome 4 (mgors4) Meier-Gorlin syndrome 4 MGORS4 [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
|
RCV000989650 rs139038990 RCV000973215 CA8233538 |
83 | P>L | Meier-Gorlin syndrome 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA8233569 VAR_065489 rs779871947 |
117 | Q>H | Meier-gorlin syndrome 4 (mgors4) MGORS4 [Ensembl, UniProt] | Yes |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000974644 CA8233725 rs145552478 RCV000501711 RCV000765317 |
205 | G>S | Meier-Gorlin syndrome 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001302990 CA8233753 rs750025399 RCV003166708 |
228 | R>H | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000612563 rs507329 RCV001523129 VAR_054504 RCV000116652 CA152278 |
234 | C>R | Meier-Gorlin syndrome 4 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA152280 RCV001579289 VAR_054505 RCV001523130 rs480727 RCV000116654 |
262 | T>A | Meier-Gorlin syndrome 4 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs779105998 CA8234017 RCV001331422 |
375 | M>I | Meier-Gorlin syndrome 4 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs143840572 CA8234026 RCV000509243 |
385 | R>H | Variant assessed as Somatic; 0.0 impact. Meier-Gorlin syndrome 4 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV002550693 CA8234131 RCV000996384 rs139052420 |
450 | R>C | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA8234133 rs200672589 RCV002056841 RCV000504305 VAR_065490 RCV000714654 |
453 | R>W | Meier-Gorlin syndrome 4 MGORS4 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA129282 RCV000023455 rs387906917 VAR_065491 RCV000420938 RCV000825514 |
462 | R>Q | Meier-gorlin syndrome 4 (mgors4) Meier-Gorlin syndrome Meier-Gorlin syndrome 4 MGORS4 [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
VAR_065492 rs200652608 COSM974774 RCV000023459 CA129284 RCV001596941 |
468 | E>K | Meier-gorlin syndrome 4 (mgors4) endometrium Meier-Gorlin syndrome 4 MGORS4 [Ensembl, Cosmic, ClinVar, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs141663679 RCV000954754 RCV001262500 RCV002517061 RCV000194987 CA209528 |
471 | P>A | Inborn genetic diseases Meier-Gorlin syndrome 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs147914553 CA397083436 RCV000023456 CA397083437 |
520 | Y>* | Meier-Gorlin syndrome 4 Meier-gorlin syndrome 4 (mgors4) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA8233482 rs764424809 |
2 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA286412888 rs990267710 |
2 | E>K | No |
ClinGen TOPMed |
|
|
rs1294161828 CA397069729 |
3 | Q>H | No |
ClinGen TOPMed |
|
|
rs757462069 CA8233484 |
4 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA8233485 rs781585324 |
4 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA8233486 rs746046888 |
5 | R>C | No |
ClinGen ExAC |
|
|
CA8233488 rs780221469 |
6 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs749237888 CA8233489 |
7 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1460180527 CA397069776 |
8 | D>A | No |
ClinGen TOPMed |
|
|
rs1394255147 CA397069783 |
8 | D>E | No |
ClinGen TOPMed |
|
|
rs1463151323 CA397069771 |
8 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA397069773 rs1463151323 |
8 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1295956463 CA397069825 |
11 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
RCV001314794 CA8233492 rs747955522 CA397069876 |
16 | G>R | No |
ClinGen ExAC TOPMed gnomAD ClinVar dbSNP |
|
|
CA397069890 rs771807015 |
17 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397069895 rs1222100253 |
17 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs771807015 CA8233494 |
17 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 19 | R>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA286412914 rs992119597 |
19 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
RCV001309912 rs772886944 CA397069919 |
19 | R>H | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs772886944 CA8233495 |
19 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA286412912 rs992119597 |
19 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA397069952 rs1249757374 |
21 | A>V | No |
ClinGen gnomAD |
|
|
rs1597503748 CA397069984 |
24 | K>Q | No |
ClinGen Ensembl |
|
|
rs1048076521 CA286412922 |
25 | L>P | No |
ClinGen TOPMed |
|
|
CA397070001 rs1223199043 |
25 | L>V | No |
ClinGen gnomAD |
|
|
rs1479390790 CA397070031 |
27 | C>Y | No |
ClinGen gnomAD |
|
|
CA8233498 rs776191697 |
28 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs1198442469 CA397070043 |
28 | R>S | No |
ClinGen gnomAD |
|
|
rs1167867083 CA397070079 |
30 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA397070077 rs1167867083 |
30 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA286412931 rs1040900482 |
30 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1457945528 CA397070103 |
32 | P>S | No |
ClinGen gnomAD |
|
|
rs996788411 CA286412937 |
33 | A>D | No |
ClinGen TOPMed |
|
|
CA397070108 rs900968138 |
33 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA286412935 rs900968138 |
33 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA397070113 rs1350752511 |
34 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1397013823 CA397070142 |
35 | P>L | No |
ClinGen TOPMed |
|
|
CA397070147 rs1342162490 |
36 | A>S | No |
ClinGen Ensembl |
|
|
rs1171887495 CA397070158 |
37 | L>V | No |
ClinGen TOPMed |
|
|
rs1239022151 CA397070186 |
38 | R>L | No |
ClinGen TOPMed |
|
|
rs1363089635 CA397070194 |
39 | A>V | No |
ClinGen gnomAD |
|
|
rs751960101 CA8233500 |
40 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397070208 rs751960101 |
40 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307032221 CA397070241 |
43 | A>S | No |
ClinGen gnomAD |
|
|
rs1307032221 CA397070237 |
43 | A>T | No |
ClinGen gnomAD |
|
| TCGA novel | 44 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs587780306 RCV000116639 RCV000966015 CA230994 |
44 | T>P | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1201005781 CA397070255 |
45 | S>G | No |
ClinGen TOPMed |
|
|
rs1349999626 CA397070266 |
45 | S>T | No |
ClinGen TOPMed |
|
|
rs1012021064 CA286412943 |
47 | S>N | No |
ClinGen TOPMed |
|
|
rs1293974635 CA397070306 |
48 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1293974635 CA397070310 |
48 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA286412944 rs1021574193 |
48 | R>S | No |
ClinGen TOPMed |
|
|
rs967475200 CA286412946 |
50 | R>H | No |
ClinGen TOPMed |
|
|
CA397070334 rs1311086899 |
50 | R>S | No |
ClinGen TOPMed |
|
|
rs1221564127 CA397070351 |
51 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1242551965 CA397070366 |
51 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1597503816 CA397070374 |
52 | R>C | No |
ClinGen Ensembl |
|
|
rs1486713182 CA397070380 |
52 | R>L | No |
ClinGen gnomAD |
|
|
CA397070399 rs1184453539 |
53 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1382784205 CA397070451 |
56 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
CA397070440 rs1484061805 |
56 | A>T | No |
ClinGen gnomAD |
|
|
rs1382784205 CA397070455 |
56 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs561655241 CA397070561 |
62 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs561655241 RCV000970020 CA8233503 RCV000503296 |
62 | A>V | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs756387541 CA8233504 |
63 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1486577551 CA397070587 |
64 | P>S | No |
ClinGen TOPMed |
|
|
rs1433286943 CA397070630 |
67 | R>L | No |
ClinGen gnomAD |
|
|
rs1285888584 CA397070657 |
69 | R>I | No |
ClinGen TOPMed |
|
|
rs753921598 CA8233506 |
71 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs780344447 CA397070679 |
71 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA8233507 rs754918560 |
74 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs754918560 CA397070726 |
74 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA286412969 rs952982891 |
74 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs983826606 CA397070753 |
76 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1357911476 CA397070757 |
76 | E>A | No |
ClinGen TOPMed |
|
|
CA397070766 rs1318615644 |
76 | E>D | No |
ClinGen gnomAD |
|
|
CA286412977 rs983826606 |
76 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA397070903 rs1435492295 |
77 | V>F | No |
ClinGen TOPMed |
|
|
CA397070922 rs1377491989 |
78 | S>A | No |
ClinGen TOPMed |
|
|
CA397070925 rs1172065200 |
78 | S>Y | No |
ClinGen TOPMed |
|
|
rs1364107699 CA397070950 |
79 | S>N | No |
ClinGen TOPMed |
|
|
CA8233535 rs769359873 |
79 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA286413296 rs902450437 |
80 | P>S | No |
ClinGen TOPMed |
|
|
rs902450437 CA286413293 |
80 | P>T | No |
ClinGen TOPMed |
|
|
CA8233537 rs762472427 |
81 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397070992 rs762472427 |
81 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1056308959 CA397071019 |
82 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1056308959 CA286413304 |
82 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1056308959 CA397071017 |
82 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA286413309 rs139038990 |
83 | P>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs139038990 CA8233539 |
83 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs759622950 CA8233542 |
85 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397071121 rs1406633426 |
86 | P>L | No |
ClinGen gnomAD |
|
|
rs765420165 CA397071116 |
86 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs765420165 CA8233543 |
86 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA8233544 rs375032017 |
90 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs758373042 CA8233545 |
92 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397071242 rs758373042 |
92 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397071233 rs1330293139 |
92 | P>S | No |
ClinGen gnomAD |
|
|
rs751451179 CA8233547 |
93 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1337000526 CA397071271 |
93 | S>P | No |
ClinGen gnomAD |
|
|
rs780790780 CA8233549 |
94 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs757078098 CA8233548 |
94 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA286413336 rs145827882 |
95 | G>D | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1411117646 CA397071337 |
96 | Q>* | No |
ClinGen TOPMed |
|
|
CA8233551 rs755712993 |
96 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397071345 rs755712993 |
96 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8233553 rs779651660 |
97 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000500555 CA8233554 RCV000910695 rs142692932 |
98 | I>V | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 99 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397072211 rs1597504243 |
102 | T>P | No |
ClinGen Ensembl |
|
|
CA397072241 rs773890395 |
103 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs773890395 CA8233555 |
103 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA397072239 rs1207250612 |
103 | P>S | No |
ClinGen TOPMed |
|
|
rs1327591000 CA397072246 |
104 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA286413364 rs897295278 |
104 | A>V | No |
ClinGen TOPMed |
|
|
rs141874338 CA8233559 |
106 | G>D | No |
ClinGen ESP ExAC gnomAD |
|
|
CA286413372 rs377400945 |
106 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377400945 CA8233558 |
106 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV001345396 rs141874338 |
106 | G>V | No |
ClinVar dbSNP |
|
|
rs1357927628 CA397072350 |
108 | P>L | No |
ClinGen TOPMed |
|
|
CA8233560 rs765346879 |
108 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA397072373 rs763045183 |
110 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397072388 rs1327231508 |
110 | H>Q | No |
ClinGen TOPMed |
|
|
rs763045183 CA8233562 |
110 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397072439 rs1320586110 |
113 | S>F | No |
ClinGen TOPMed |
|
|
CA8233567 rs750150918 |
115 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397072473 rs767411891 |
115 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767411891 CA8233566 |
115 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA286413388 rs769259147 |
116 | D>N | No |
ClinGen gnomAD |
|
|
CA397072488 rs769259147 |
116 | D>Y | No |
ClinGen gnomAD |
|
|
rs755836854 CA397072509 |
117 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755836854 CA8233568 |
117 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397072761 rs1235166851 |
122 | E>D | No |
ClinGen TOPMed |
|
|
rs1197526229 CA397072754 |
122 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA8233618 rs753685223 |
123 | L>H | No |
ClinGen ExAC gnomAD |
|
|
rs759307080 CA8233619 |
124 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA8233620 rs764961494 |
125 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA397072806 rs1203096584 |
125 | S>P | No |
ClinGen TOPMed |
|
|
rs1347748413 CA397072860 |
127 | L>P | No |
ClinGen gnomAD |
|
|
CA397072899 rs1463041438 |
129 | R>Q | No |
ClinGen gnomAD |
|
|
CA8233623 rs757879446 |
129 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs777272162 CA8233624 |
130 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA397072942 rs756607694 |
131 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756607694 CA8233626 |
131 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs377742778 CA8233625 |
131 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1213241588 CA397072950 |
132 | E>Q | No |
ClinGen TOPMed |
|
|
CA286413480 rs879237563 |
133 | L>M | No |
ClinGen Ensembl |
|
|
rs780436081 CA8233627 |
133 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA397072976 rs1300814915 |
134 | G>R | No |
ClinGen gnomAD |
|
|
CA8233629 rs749626249 |
135 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000966016 rs3218725 RCV000116648 CA152272 VAR_029163 |
135 | A>V | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA397073020 rs1224192420 |
136 | R>G | No |
ClinGen TOPMed |
|
|
rs534520741 CA397073046 |
137 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs534520741 CA8233630 |
137 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8233633 rs773329755 |
138 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs149361322 CA8233631 RCV001348784 |
138 | R>W | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA397073080 rs1190312018 |
139 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA397073075 rs1487370229 |
139 | A>T | No |
ClinGen gnomAD |
|
|
rs1190312018 CA397073087 |
139 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA286413493 rs1044879033 |
140 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA397073117 rs147217711 |
141 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8233635 rs559019677 |
141 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1597504475 CA397073124 |
142 | A>P | No |
ClinGen Ensembl |
|
| TCGA novel | 142 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397073193 rs1429736027 |
144 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA397073188 rs1429736027 |
144 | A>T | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 144 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs765088059 CA8233638 |
145 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA397073269 rs1232481701 |
146 | D>G | No |
ClinGen gnomAD |
|
|
rs1293255919 CA397073253 |
146 | D>H | No |
ClinGen gnomAD |
|
|
rs1362939707 CA397073296 |
147 | A>S | No |
ClinGen gnomAD |
|
|
CA397073306 rs1384067940 |
147 | A>V | No |
ClinGen gnomAD |
|
|
rs1295576552 CA397073313 |
148 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1295576552 CA397073316 |
148 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1341525912 CA397073324 |
149 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
rs762650852 CA8233639 |
149 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs763576518 CA8233640 |
150 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA397073374 rs1319813016 |
151 | C>G | No |
ClinGen gnomAD |
|
|
CA397073415 rs751046700 |
152 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8233641 rs751046700 |
152 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1597504512 CA397073387 |
152 | T>P | No |
ClinGen Ensembl |
|
|
CA397073423 rs756658767 |
153 | P>A | No |
ClinGen ExAC |
|
|
CA8233643 rs756658767 |
153 | P>S | No |
ClinGen ExAC |
|
|
rs1186266322 CA397073476 |
155 | A>G | No |
ClinGen gnomAD |
|
|
rs370159425 CA286413513 |
155 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8233644 rs370159425 |
155 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 156 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1444682337 CA397073495 |
156 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs748806867 CA397073523 |
157 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 157 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs748806867 CA8233646 |
157 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 158 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8233648 rs367849928 |
158 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8233649 rs758643449 |
159 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA397073612 rs1483327272 |
161 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA397073648 rs777756707 |
162 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777756707 CA8233650 |
162 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8233678 rs369220248 |
165 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8233682 rs772707090 |
169 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs760003134 CA8233683 |
171 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA8233684 rs765752707 |
171 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
RCV000116650 CA230996 VAR_029164 rs3218727 |
172 | R>C | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs763410679 RCV001062771 CA8233685 |
172 | R>H | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA8233687 rs751847681 CA397074178 |
173 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8233686 rs764491070 |
173 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
rs781458794 CA8233689 |
174 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs757541865 CA8233688 |
174 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8233691 rs756094228 |
175 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1272680751 CA397074229 |
176 | L>P | No |
ClinGen gnomAD |
|
|
CA397074255 rs1343795670 |
177 | A>V | No |
ClinGen gnomAD |
|
|
CA8233692 rs780068467 |
178 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs749112424 CA286413799 |
179 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753938206 CA286413801 |
179 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA8233693 rs749112424 |
179 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778663120 CA8233695 |
180 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 180 | G>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8233698 rs148460469 |
181 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA286413810 rs148460469 |
181 | L>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs747865155 CA8233697 |
181 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs545919129 CA8233699 |
182 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1254721417 CA397074424 |
182 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1418617032 CA397074511 |
184 | L>F | No |
ClinGen TOPMed |
|
|
CA286413822 rs577211739 CA8233702 |
185 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA286413819 rs577211739 |
185 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1167857590 CA397074565 |
186 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs751939089 CA8233703 |
187 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs762171997 CA8233704 |
188 | Y>* | No |
ClinGen ExAC |
|
|
CA397074604 COSM1737516 rs1406905903 |
188 | Y>C | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA397074624 rs1321283671 |
189 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 190 | Y>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8233706 rs750567415 |
192 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1709504 rs756222380 CA8233707 |
193 | L>V | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA397074759 rs1227222385 |
194 | A>P | No |
ClinGen TOPMed |
|
|
rs544489602 CA8233710 |
194 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs747918319 CA8233712 |
195 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8233715 rs777434586 |
196 | M>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8233714 rs777434586 |
196 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758141929 CA8233713 |
196 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs766683758 CA286413846 |
197 | F>L | No |
ClinGen Ensembl |
|
|
rs140700251 CA8233716 |
198 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8233717 rs775994089 |
198 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs749876459 CA8233718 |
200 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8233719 rs769261147 |
202 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762294762 CA8233721 |
203 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA8233723 rs773495319 |
204 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8233726 rs753832416 |
205 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA8233729 rs752592573 |
206 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765182594 CA8233728 |
206 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA8233727 rs754960043 |
206 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA8233730 rs758197391 |
207 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs75439984 CA286413873 |
208 | H>P | No |
ClinGen Ensembl |
|
|
rs1384922743 CA397075074 |
209 | N>D | No |
ClinGen TOPMed |
|
|
rs980887091 CA286413876 |
210 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1410505499 CA397075122 |
211 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs746736930 CA8233732 |
211 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA8233736 COSM974766 rs769385427 |
212 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA8233738 rs146872515 |
213 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs146872515 CA8233737 |
213 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8233740 rs370127987 |
214 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs370127987 CA397075172 |
214 | P>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8233742 rs201871319 |
215 | T>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs765235636 CA8233745 |
217 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752647897 CA8233746 |
217 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397075248 rs1409329871 |
218 | K>E | No |
ClinGen gnomAD |
|
|
CA397075305 rs1336899104 |
220 | Q>* | No |
ClinGen gnomAD |
|
|
rs762869154 CA8233748 |
220 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs542997068 CA286413901 |
221 | R>Q | No |
ClinGen TOPMed |
|
|
rs764018742 CA8233749 |
221 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397075342 rs1332733359 |
222 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA397075347 rs1332733359 |
222 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA8233750 rs373340835 |
223 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8233751 rs570089762 |
224 | Q>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1228011401 CA397075409 |
225 | D>G | No |
ClinGen gnomAD |
|
|
rs1228011401 CA397075407 |
225 | D>V | No |
ClinGen gnomAD |
|
|
rs1256723276 CA397075419 |
226 | M>V | No |
ClinGen gnomAD |
|
|
rs377465796 CA8233752 |
227 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA286417605 COSM1679330 rs538165836 |
228 | R>C | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated 1000Genomes TOPMed gnomAD |
|
rs1365996136 CA397076415 |
230 | R>C | No |
ClinGen gnomAD |
|
|
rs1597505116 CA397076433 |
230 | R>H | No |
ClinGen Ensembl |
|
|
rs1046561510 CA286417777 |
231 | F>L | No |
ClinGen Ensembl |
|
|
rs368285287 CA8233784 |
232 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397076515 rs775598586 |
233 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397076503 rs1272433692 |
233 | E>G | No |
ClinGen gnomAD |
|
|
CA286417789 rs507329 |
234 | C>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs507329 CA397076516 |
234 | C>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8233786 rs562796806 |
234 | C>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs562796806 CA8233787 |
234 | C>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA286417793 rs938131734 |
235 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
rs761792897 CA397076538 |
235 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761792897 CA8233788 |
235 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1190255475 CA397076551 |
236 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs919041444 CA286417800 |
237 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs993497612 CA286417834 |
240 | K>R | No |
ClinGen TOPMed |
|
|
rs145904773 CA8233790 |
241 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1351974702 CA397076695 |
242 | V>A | No |
ClinGen gnomAD |
|
|
CA8233792 rs766150941 |
242 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA397076724 rs1187766769 |
243 | Y>C | No |
ClinGen TOPMed |
|
|
CA397076738 rs1389607805 |
244 | P>A | No |
ClinGen gnomAD |
|
|
rs145319641 CA8233795 |
244 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs145319641 CA8233796 |
244 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397076739 rs1389607805 |
244 | P>S | No |
ClinGen gnomAD |
|
|
rs1295515267 CA397076756 |
245 | A>T | No |
ClinGen TOPMed |
|
|
rs1364374363 CA397076770 |
245 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA397076784 rs890394045 |
246 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA286417928 rs890394045 |
246 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA397076795 rs1319674922 |
247 | Y>H | No |
ClinGen gnomAD |
|
|
CA230998 RCV000116653 rs149192605 |
248 | R>C | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs780256305 CA8233800 |
248 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs780256305 CA8233799 |
248 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs149192605 CA8233798 |
248 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs777602555 CA8233801 |
249 | F>LMRKA* | No |
ClinGen ExAC |
|
|
rs199723040 CA8233802 |
250 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs774484812 CA8233803 |
250 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774484812 CA8233804 |
250 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1246880966 CA397076853 |
251 | Q>K | No |
ClinGen TOPMed gnomAD |
|
|
CA8233805 rs772110916 |
251 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
rs772110916 CA397076865 |
251 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs760579130 CA8233807 |
252 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs773233928 CA8233806 |
252 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA8233808 RCV001344779 rs143284523 |
253 | R>C | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs148337159 RCV000887228 RCV000500107 CA8233809 |
253 | R>H | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs148337159 CA8233810 |
253 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8233812 rs752224369 |
254 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs757756665 CA8233813 |
256 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750859693 CA8233815 |
258 | F>C | No |
ClinGen ExAC gnomAD |
|
|
rs750859693 CA397076952 |
258 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs749537208 CA8233818 |
260 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs374611513 CA8233817 |
260 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374611513 CA397076984 |
260 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs755194747 RCV000502524 CA8233819 |
261 | G>D | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 262 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs563825572 CA8233820 |
263 | R>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8233821 rs772237549 |
263 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA397077038 rs1283575439 |
263 | R>T | No |
ClinGen TOPMed |
|
|
CA397077044 rs1442468157 |
264 | R>W | No |
ClinGen gnomAD |
|
|
rs746885766 CA8233823 |
265 | S>* | No |
ClinGen ExAC gnomAD |
|
|
CA8233824 rs531235485 |
266 | D>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1252982289 CA397077097 |
266 | D>E | No |
ClinGen gnomAD |
|
|
CA286418031 rs1025573747 |
266 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA8233825 rs776483689 |
268 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA8233826 rs147045046 |
269 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs774961045 CA8233828 |
271 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8233827 rs769470361 |
271 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs377367421 CA8233830 |
272 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8233831 rs377367421 |
272 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397077291 rs761162797 |
276 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs963613048 CA397077310 |
276 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA8233832 rs761162797 |
276 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA397077320 rs1352074652 |
277 | Q>E | No |
ClinGen gnomAD |
|
|
rs1567501683 CA397077324 |
277 | Q>R | No |
ClinGen Ensembl |
|
|
CA286418270 rs929444235 |
278 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
CA397077459 rs1230349716 |
278 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1271533148 CA397077464 |
279 | A>T | No |
ClinGen gnomAD |
|
|
rs768273773 CA8233870 |
280 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368718178 CA8233872 |
281 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1192351671 CA397077559 |
282 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs771416695 CA8233873 |
282 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA397077562 rs1192351671 |
282 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1567501791 CA397077564 |
283 | A>P | No |
ClinGen Ensembl |
|
|
CA397077579 rs777208715 |
284 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 284 | P>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397077587 rs1473672566 |
284 | P>L | No |
ClinGen gnomAD |
|
|
rs777208715 CA8233874 |
284 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397077596 rs1416732050 |
285 | Q>* | No |
ClinGen gnomAD |
|
| TCGA novel | 285 | Q>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs765701438 CA8233876 |
287 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000927258 rs775967677 CA8233877 |
289 | S>L | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
RCV000593478 rs200820843 CA8233878 |
290 | R>C | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA8233879 rs570140833 |
290 | R>H | Variant assessed as Somatic; 6.875e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs200820843 CA286418288 |
290 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs757420761 CA8233881 |
291 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA397077859 rs1256804835 |
293 | Q>H | No |
ClinGen gnomAD |
|
|
rs767477776 CA8233882 |
293 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs537487304 CA8233883 |
293 | Q>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8233884 rs755972697 |
294 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA286418311 rs950395463 |
294 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs139127078 CA286418312 |
295 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV001298023 rs1908845159 |
295 | R>L | No |
ClinVar dbSNP |
|
|
CA8233887 rs149521649 |
295 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8233886 rs149521649 |
295 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs139127078 CA8233885 |
295 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs148645974 CA397077912 |
296 | Q>H | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA397078016 rs1403548687 |
300 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
RCV000116637 rs143149360 CA230992 |
300 | Q>H | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs371671359 CA8233891 |
302 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8233892 rs770180406 |
303 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1334153060 CA397078205 |
305 | H>L | No |
ClinGen gnomAD |
|
|
CA8233893 rs542082324 |
306 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA397078222 rs542082324 |
306 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1347121102 CA397078314 |
307 | K>N | No |
ClinGen gnomAD |
|
|
CA286418359 rs906896081 |
307 | K>Q | No |
ClinGen Ensembl |
|
|
rs1484718263 CA397078340 |
308 | E>G | No |
ClinGen gnomAD |
|
|
CA8233894 rs764489464 |
308 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397078388 rs1187572260 |
309 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA8233896 rs774767743 |
309 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA397078626 rs751161254 |
312 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8233926 rs200373131 |
312 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8233927 rs751161254 |
312 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8233928 rs756845256 |
315 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780841230 CA8233929 |
317 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1428315038 CA397078756 |
318 | S>N | No |
ClinGen gnomAD |
|
|
CA8233932 rs779511569 |
318 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs139116876 CA8233934 |
320 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs139116876 CA8233935 |
320 | A>T | Variant assessed as Somatic; 4.913e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs151127192 CA8233938 |
321 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs144458606 CA8233937 |
321 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV000194441 rs797045446 CA208613 |
322 | V>A | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
CA8233939 rs753386686 |
324 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs763895797 CA8233943 CA8233944 |
326 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs752643196 CA8233941 |
326 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752643196 CA8233942 |
326 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA286418776 rs141042249 |
329 | T>I | No |
ClinGen ESP TOPMed |
|
|
rs756935088 CA8233945 |
330 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs150252167 CA8233947 |
333 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8233949 rs779291173 |
334 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1274868160 CA397079174 |
334 | R>H | No |
ClinGen TOPMed |
|
|
CA8233951 rs758746304 |
336 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397079288 rs1156943864 |
337 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA8233953 rs145752768 |
337 | V>M | No |
ClinGen ESP |
|
|
CA397079376 rs747236636 |
341 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs747236636 CA8233955 |
341 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1344542219 CA397079370 |
341 | P>T | No |
ClinGen gnomAD |
|
|
rs372182503 CA8233957 |
342 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1463237618 CA397079478 |
343 | I>F | No |
ClinGen gnomAD |
|
|
CA8233958 rs745980812 |
344 | E>D | No |
ClinGen ExAC gnomAD |
|
|
RCV000116631 rs587780303 CA230986 |
344 | E>K | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
rs587780303 CA397079504 |
344 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA8233959 rs141611072 |
345 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1396298799 CA397079575 |
347 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs762939263 CA8233961 |
347 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1597505770 CA397079599 |
348 | L>P | No |
ClinGen Ensembl |
|
| TCGA novel | 350 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8233963 rs774170489 |
351 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1234385024 CA397079754 |
353 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs750027487 CA8233966 |
354 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 355 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397079803 rs1433751708 |
355 | E>K | No |
ClinGen gnomAD |
|
|
rs765899435 CA8233968 |
356 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1373498979 CA397079965 |
358 | T>I | No |
ClinGen gnomAD |
|
|
CA286418854 rs1029068826 |
359 | T>A | No |
ClinGen Ensembl |
|
|
rs957412599 CA286418872 |
360 | A>V | No |
ClinGen Ensembl |
|
|
CA397080031 rs1355983031 |
361 | Q>E | No |
ClinGen gnomAD |
|
|
CA397080029 rs1355983031 |
361 | Q>K | No |
ClinGen gnomAD |
|
|
rs1041008026 CA286418880 |
363 | V>A | No |
ClinGen TOPMed |
|
|
CA8233972 rs747397472 |
364 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8233973 rs747397472 |
364 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1375147429 CA397080135 |
365 | A>G | No |
ClinGen TOPMed |
|
|
CA286418892 rs781400118 |
366 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs372945501 CA397080171 |
366 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372945501 CA8233975 |
366 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8233974 rs781400118 |
366 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA8233976 rs376333288 |
368 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397080962 rs376333288 |
368 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397080964 rs1346275185 |
368 | R>H | No |
ClinGen gnomAD |
|
|
rs370716489 RCV001294324 CA286418931 |
370 | L>V | No |
ClinGen ClinVar ESP TOPMed dbSNP |
|
|
CA8233978 rs749227990 |
371 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397081014 rs1202670110 |
373 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA397081008 rs1439838246 |
373 | P>T | No |
ClinGen gnomAD |
|
|
rs774113768 CA397081021 |
374 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA8233982 rs761703584 |
374 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774113768 CA8233981 |
374 | R>T | No |
ClinGen ExAC gnomAD |
|
|
rs748163520 CA8234018 |
377 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA8234019 rs772122928 |
377 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs777794724 CA8234020 |
378 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA397081163 rs1334081614 |
379 | L>S | No |
ClinGen TOPMed |
|
|
rs746823179 CA8234021 |
380 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs200300950 CA286419299 |
381 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs557565314 CA8234025 |
385 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762360962 CA8234027 |
386 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs1233698892 CA397081230 |
386 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs768020294 CA8234028 |
387 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs773673217 CA8234029 |
388 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8234031 rs563958108 |
389 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8234032 rs754131326 |
390 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA397081324 rs1486549030 |
391 | S>R | No |
ClinGen gnomAD |
|
|
rs755152546 CA8234033 |
392 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs1055670587 CA286419341 |
392 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs746870943 CA8234038 |
393 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397081356 rs746870943 |
393 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8234037 rs531159541 |
393 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1158525129 CA397081385 |
394 | S>F | No |
ClinGen gnomAD |
|
|
CA397081375 rs1246490489 |
394 | S>P | No |
ClinGen TOPMed |
|
|
rs745596794 CA8234040 |
395 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs769418929 CA8234041 |
397 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA8234042 rs775060554 |
398 | A>V | No |
ClinGen ExAC gnomAD |
|
|
RCV000193971 CA207817 rs768108309 |
399 | L>P | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA8234045 rs367845242 |
400 | P>L | No |
ClinGen ESP ExAC TOPMed |
|
|
rs773820231 CA8234044 |
400 | P>T | No |
ClinGen ExAC |
|
|
rs139927650 CA8234047 |
401 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8234048 rs759922830 |
401 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs758571492 CA8234051 |
402 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs758571492 CA397081532 |
402 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs781095684 CA8234055 |
403 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA286419411 rs781095684 |
403 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8234053 rs199674701 |
403 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8234054 rs199674701 |
403 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8234058 rs779706051 |
404 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA8234057 rs755867677 |
404 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA8234059 rs748918827 |
405 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397081576 rs1172232372 |
406 | T>I | No |
ClinGen gnomAD |
|
|
CA8234060 rs768196304 |
406 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA8234061 RCV000996383 rs773731569 |
407 | P>L | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs773731569 CA397081591 |
407 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8234062 rs773731569 |
407 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777128844 RCV001315364 CA8234063 |
408 | P>L | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 409 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8234064 rs760009000 |
409 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA397081613 rs1390906514 |
410 | A>T | No |
ClinGen gnomAD |
|
|
CA8234067 rs775902253 |
412 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA397081650 rs770232566 |
412 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA8234066 rs770232566 |
412 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1476945209 CA397081657 |
413 | S>G | No |
ClinGen TOPMed |
|
|
CA397081662 rs1302462116 |
413 | S>I | No |
ClinGen gnomAD |
|
|
rs763233317 RCV001349409 CA8234068 |
414 | A>S | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1490767702 CA397081685 |
416 | K>Q | No |
ClinGen TOPMed |
|
|
rs1287487253 CA397081703 |
417 | G>E | No |
ClinGen TOPMed |
|
|
rs764297729 CA8234070 |
417 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1026845590 CA397081707 |
418 | V>L | No |
ClinGen gnomAD |
|
|
CA286419464 rs1026845590 |
418 | V>M | No |
ClinGen gnomAD |
|
|
rs952708220 CA286419468 |
420 | Q>* | No |
ClinGen gnomAD |
|
|
CA397081737 rs1597506213 |
421 | D>G | No |
ClinGen Ensembl |
|
|
CA8234072 rs761890744 |
421 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1429505219 CA397081743 |
422 | L>M | No |
ClinGen gnomAD |
|
|
CA397081764 rs1461658755 |
424 | E>G | No |
ClinGen gnomAD |
|
|
CA8234073 rs767389893 |
424 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA397081762 rs1461658755 |
424 | E>V | No |
ClinGen gnomAD |
|
|
rs779795890 CA286419477 |
425 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779795890 CA8234076 |
425 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8234075 rs368049819 |
425 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1471061871 CA397081818 |
426 | I>L | No |
ClinGen TOPMed |
|
|
rs1597506303 CA397081825 |
426 | I>T | No |
ClinGen Ensembl |
|
|
COSM1200631 CA8234106 rs749671711 |
427 | R>* | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs769020559 CA8234107 |
427 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397081840 rs1359772760 |
428 | A>V | No |
ClinGen gnomAD |
|
|
rs1314412876 CA397081857 |
430 | E>K | No |
ClinGen gnomAD |
|
|
CA397081878 rs1567502590 |
431 | A>E | No |
ClinGen Ensembl |
|
|
CA8234109 rs146214741 |
431 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8234110 rs772113734 |
432 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs894510057 CA286419602 |
432 | Q>P | No |
ClinGen Ensembl |
|
|
rs773268270 CA8234111 |
433 | K>M | No |
ClinGen ExAC gnomAD |
|
|
rs1243210572 CA397081885 |
433 | K>Q | No |
ClinGen TOPMed |
|
|
CA8234112 rs773268270 |
433 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA8234113 rs555260168 |
434 | Q>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs776512358 CA8234114 |
436 | A>T | No |
ClinGen ExAC |
|
|
rs1235556494 CA397081917 |
436 | A>V | No |
ClinGen gnomAD |
|
|
rs1011702939 CA286419614 |
438 | M>T | No |
ClinGen TOPMed |
|
|
rs573686608 CA8234115 |
439 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs758063867 CA8234118 |
440 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs553021912 CA8234117 |
440 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs577749423 CA8234119 |
441 | C>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA397081964 rs577749423 |
441 | C>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA397081963 rs577749423 |
441 | C>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200199040 CA8234120 |
442 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs763069753 CA286419639 |
443 | E>G | No |
ClinGen gnomAD |
|
|
rs1357535906 CA397081991 |
444 | Q>K | No |
ClinGen TOPMed |
|
|
rs1329153788 CA397082011 |
445 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs780734780 CA8234124 |
445 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397082004 rs780734780 |
445 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8234126 rs749783312 |
446 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397082027 rs1442250152 |
447 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA8234128 rs755342796 |
447 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs779333410 CA8234130 |
448 | L>P | No |
ClinGen ExAC |
|
|
CA8234132 rs772355366 |
450 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA397082073 rs1597506393 |
452 | E>D | No |
ClinGen Ensembl |
|
|
rs1309417334 CA397082065 |
452 | E>Q | No |
ClinGen gnomAD |
|
|
rs747123592 CA8234134 |
453 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
VAR_029165 CA152256 rs3218729 RCV000887229 RCV000116640 |
456 | E>A | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA8234136 rs776599320 |
456 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs775339367 CA8234138 |
457 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs145394645 CA397082119 |
458 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1407840826 CA397082113 |
458 | A>T | No |
ClinGen gnomAD |
|
|
CA8234139 rs145394645 |
458 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8234140 COSM974772 rs763839264 |
459 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA8234141 rs751213474 |
459 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA8234142 rs751213474 |
459 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA286419719 rs528610361 RCV001345267 |
460 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar 1000Genomes NCI-TCGA TOPMed dbSNP gnomAD |
|
CA397082139 rs1431743334 |
461 | L>P | No |
ClinGen TOPMed |
|
|
RCV001341386 rs755500544 CA8234144 |
462 | R>W | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA8234145 rs748552177 |
463 | S>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 463 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8234146 rs758722232 |
464 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs747209207 CA8234149 |
465 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777993968 CA8234148 |
465 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs1192528404 CA397082166 |
466 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA397082163 rs1474244172 |
466 | V>L | No |
ClinGen gnomAD |
|
|
CA8234150 rs771038378 |
467 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA8234153 rs200652608 |
468 | E>Q | Meier-gorlin syndrome 4 (mgors4) [Ensembl] | No |
ClinGen ExAC TOPMed gnomAD |
|
rs141750196 COSM3783001 CA8234154 |
469 | R>C | prostate [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1405278188 CA397082181 |
469 | R>H | No |
ClinGen gnomAD |
|
|
CA397082186 rs1224404853 |
470 | K>* | No |
ClinGen TOPMed |
|
|
rs1224404853 CA397082185 |
470 | K>E | No |
ClinGen TOPMed |
|
|
CA8234155 rs141663679 |
471 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1375100483 CA397082198 |
472 | A>S | No |
ClinGen gnomAD |
|
|
rs202071237 CA8234156 |
472 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs767196625 CA8234157 |
473 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1235287735 CA397082212 |
474 | S>G | No |
ClinGen gnomAD |
|
|
CA397082239 rs1345848507 |
475 | M>I | No |
ClinGen TOPMed |
|
|
CA8234158 rs749966576 |
475 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1282483155 CA397082232 |
475 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA8234160 rs760038187 |
477 | V>E | No |
ClinGen ExAC gnomAD |
|
|
CA397082280 rs1456300167 |
478 | A>T | No |
ClinGen TOPMed |
|
|
CA8234161 rs765805425 |
478 | A>V | No |
ClinGen ExAC gnomAD |
|
|
RCV000224778 CA10581298 rs758810157 |
479 | C>F | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA8234163 rs758810157 |
479 | C>S | No |
ClinGen ExAC gnomAD |
|
|
rs1475981587 CA397082317 |
480 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA8234164 rs778080229 |
481 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA397082364 rs1210404381 |
482 | M>I | No |
ClinGen TOPMed |
|
|
CA286419817 rs760114445 |
482 | M>T | No |
ClinGen Ensembl |
|
|
CA8234166 rs757456654 |
482 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1597506511 CA397082388 |
483 | V>G | No |
ClinGen Ensembl |
|
|
CA397082384 rs1159674532 |
483 | V>M | No |
ClinGen gnomAD |
|
|
CA397082434 rs1418258076 |
487 | C>F | No |
ClinGen gnomAD |
|
|
rs745962041 CA8234168 |
488 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs550557201 CA8234170 |
489 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8234172 rs749210361 |
490 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1480590104 CA397082456 |
490 | M>L | No |
ClinGen TOPMed |
|
|
CA8234171 rs147704737 |
490 | M>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs146199695 CA8234174 |
491 | S>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
RCV000500308 CA8234173 RCV000884097 rs146199695 |
491 | S>N | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1278893342 CA397082481 |
492 | P>R | No |
ClinGen gnomAD |
|
|
rs1339976168 CA397082479 |
492 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA8234214 rs755069633 |
493 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA397082486 rs1239803972 |
493 | G>R | No |
ClinGen gnomAD |
|
|
CA397082830 rs1274359783 |
494 | E>K | No |
ClinGen gnomAD |
|
|
CA8234215 rs779016173 |
495 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1208488728 CA397082935 |
497 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1597506969 CA397082945 |
498 | H>P | No |
ClinGen Ensembl |
|
|
rs1567503092 CA397083032 |
502 | L>F | No |
ClinGen Ensembl |
|
|
rs147828044 CA8234217 RCV000898267 |
503 | S>A | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA8234220 rs548414653 |
504 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8234219 rs548414653 |
504 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs745410073 CA8234221 |
506 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA8234222 rs528354191 |
507 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8234223 rs762191927 |
508 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773464198 CA8234225 |
511 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA8234226 rs761038298 |
513 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA8234227 rs766544551 |
514 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754064981 CA8234228 |
514 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs754064981 COSM974776 CA397083284 |
514 | R>L | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA8234229 rs755157588 |
515 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs144721725 CA8234230 RCV000502918 RCV000923169 |
516 | R>C | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs138633544 CA8234231 |
516 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397083315 rs144721725 |
516 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA397083336 rs1219971869 |
517 | T>A | No |
ClinGen gnomAD |
|
|
CA8234232 rs377348553 |
517 | T>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA397083388 rs1261380989 |
518 | D>G | No |
ClinGen gnomAD |
|
|
CA8234235 rs751315293 |
518 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751315293 CA8234234 RCV000502083 RCV001369377 |
518 | D>N | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 519 | T>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs780840816 CA8234236 |
519 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1256353645 CA397083415 |
519 | T>S | No |
ClinGen TOPMed |
|
|
CA8234238 rs769331060 |
521 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8234239 rs769331060 |
521 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748777018 CA397083468 |
522 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1448295739 CA397083471 |
523 | L>V | No |
ClinGen TOPMed |
|
|
rs773732420 CA8234242 |
524 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs771401327 CA8234244 |
525 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA397083570 rs752730813 |
527 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759835025 CA8234247 |
527 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8234246 rs759835025 |
527 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752730813 CA8234248 |
527 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8234250 rs370820926 |
528 | D>A | No |
ClinGen ESP ExAC gnomAD |
|
|
rs763968687 CA8234249 |
528 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs755779499 CA8234253 |
530 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA8234252 rs373841167 |
530 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 531 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779617525 CA397083715 |
532 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs779617525 CA8234254 |
532 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs369515837 CA8234257 |
534 | A>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs186133926 CA8234258 |
534 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs548156534 CA8234259 |
535 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8234260 rs75595603 |
535 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs759920771 CA8234261 |
536 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA8234262 rs770144607 |
536 | L>Q | No |
ClinGen ExAC |
|
|
CA8234263 rs373683170 |
537 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV000116646 CA152268 VAR_024408 rs3218721 RCV001523134 |
537 | A>V | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA397083889 rs991922059 |
538 | H>Q | No |
ClinGen TOPMed |
|
|
CA8234265 rs751488980 |
538 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1446661979 CA397083899 |
539 | Q>E | No |
ClinGen gnomAD |
|
|
rs1298235721 CA397083925 |
539 | Q>H | No |
ClinGen gnomAD |
|
|
CA397083937 rs1378352387 |
540 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1449609178 CA397083978 |
541 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs558748090 CA8234267 |
541 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs558748090 CA8234266 |
541 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA397083987 rs558748090 |
541 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1389853308 CA397083997 |
542 | A>D | No |
ClinGen gnomAD |
|
|
CA397083991 rs1159722111 |
542 | A>T | No |
ClinGen TOPMed |
|
|
CA397084033 rs1181241390 |
544 | E>* | No |
ClinGen TOPMed |
|
|
rs556429460 CA8234270 CA8234271 |
544 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA230990 rs144843732 RCV000116634 |
544 | E>V | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA286420565 rs887449934 |
545 | G>E | No |
ClinGen Ensembl |
|
|
rs941632720 CA286420578 |
546 | L>P | No |
ClinGen gnomAD |
|
|
rs1324137708 CA397084154 |
547 | L>W | No |
ClinGen gnomAD |
1 associated diseases with Q9H211
[MIM: 613804]: Meier-Gorlin syndrome 4 (MGORS4)
A syndrome characterized by bilateral microtia, aplasia/hypoplasia of the patellae, and severe intrauterine and postnatal growth retardation with short stature and poor weight gain. Additional clinical findings include anomalies of cranial sutures, microcephaly, apparently low-set and simple ears, microstomia, full lips, highly arched or cleft palate, micrognathia, genitourinary tract anomalies, and various skeletal anomalies. While almost all cases have primordial dwarfism with substantial prenatal and postnatal growth retardation, not all cases have microcephaly, and microtia and absent/hypoplastic patella are absent in some. Despite the presence of microcephaly, intellect is usually normal. {ECO:0000269|PubMed:21358631, ECO:0000269|PubMed:21358632}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A syndrome characterized by bilateral microtia, aplasia/hypoplasia of the patellae, and severe intrauterine and postnatal growth retardation with short stature and poor weight gain. Additional clinical findings include anomalies of cranial sutures, microcephaly, apparently low-set and simple ears, microstomia, full lips, highly arched or cleft palate, micrognathia, genitourinary tract anomalies, and various skeletal anomalies. While almost all cases have primordial dwarfism with substantial prenatal and postnatal growth retardation, not all cases have microcephaly, and microtia and absent/hypoplastic patella are absent in some. Despite the presence of microcephaly, intellect is usually normal. {ECO:0000269|PubMed:21358631, ECO:0000269|PubMed:21358632}. Note=The disease is caused by variants affecting the gene represented in this entry.
No regional properties for Q9H211
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q9H211 | |||
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| kinetochore | A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules. |
| nuclear body | Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| chromatin binding | Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. |
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| DNA polymerase binding | Binding to a DNA polymerase. |
21 GO annotations of biological process
| Name | Definition |
|---|---|
| attachment of mitotic spindle microtubules to kinetochore | The cell cycle process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex as part of mitotic metaphase plate congression. |
| cell division | The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells. |
| chromosome segregation | The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets. In eukaryotes, chromosome segregation begins with the condensation of chromosomes, includes chromosome separation, and ends when chromosomes have completed movement to the spindle poles. |
| deactivation of mitotic spindle assembly checkpoint | A positive regulation of the mitotic metaphase/anaphase transition that results from deactivation of the mitotic spindle assembly checkpoint. |
| DNA replication checkpoint signaling | A signal transduction process that contributes to a DNA replication checkpoint, that prevents the initiation of nuclear division until DNA replication is complete, thereby ensuring that progeny inherit a full complement of the genome. |
| DNA replication preinitiation complex assembly | The aggregation, arrangement and bonding together of a set of components to form the DNA replication preinitiation complex, a protein-DNA complex that is assembled at DNA replication origins immediately prior to the initiation of DNA replication. The complex consists of proteins that initiate the DNA binding, melt the helix and enable helicase activity. |
| kinetochore organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules. |
| mitotic cell cycle | Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent. |
| negative regulation of cell cycle | Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle. |
| negative regulation of DNA-templated DNA replication | Any process that stops, prevents, or reduces the frequency, rate or extent of DNA-dependent DNA replication. |
| negative regulation of protein localization to kinetochore | Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to kinetochore. |
| positive regulation of chromatin binding | Any process that increases the frequency, rate or extent of chromatin binding. Chromatin binding is the selective interaction with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. |
| positive regulation of DNA replication | Any process that activates or increases the frequency, rate or extent of DNA replication. |
| positive regulation of DNA-templated DNA replication | Any process that activates or increases the frequency, rate or extent of DNA-templated DNA replication. |
| positive regulation of protein localization to kinetochore | Any process that activates or increases the frequency, rate or extent of protein localization to kinetochore. |
| positive regulation of protein-containing complex assembly | Any process that activates or increases the frequency, rate or extent of protein complex assembly. |
| regulation of chromosome organization | Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a chromosome. |
| regulation of DNA replication origin binding | Any process that modulates the frequency, rate or extent of DNA replication origin binding. |
| regulation of DNA-templated DNA replication initiation | Any process that modulates the frequency, rate or extent of initiation of DNA-dependent DNA replication; the process in which DNA becomes competent to replicate. In eukaryotes, replication competence is established in early G1 and lost during the ensuing S phase. |
| regulation of nuclear cell cycle DNA replication | Any process that modulates the frequency, rate or extent of The DNA-dependent DNA replication that occurs in the nucleus of eukaryotic organisms as part of the cell cycle. |
| response to sorbitol | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sorbitol stimulus. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q8R4E9 | Cdt1 | DNA replication factor Cdt1 | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEQRRVTDFF | ARRRPGPPRI | APPKLACRTP | SPARPALRAP | ASATSGSRKR | ARPPAAPGRD |
| 70 | 80 | 90 | 100 | 110 | 120 |
| QARPPARRRL | RLSVDEVSSP | STPEAPDIPA | CPSPGQKIKK | STPAAGQPPH | LTSAQDQDTI |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SELASCLQRA | RELGARVRAL | KASAQDAGES | CTPEAEGRPE | EPCGEKAPAY | QRFHALAQPG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LPGLVLPYKY | QVLAEMFRSM | DTIVGMLHNR | SETPTFAKVQ | RGVQDMMRRR | FEECNVGQIK |
| 250 | 260 | 270 | 280 | 290 | 300 |
| TVYPASYRFR | QERSVPTFKD | GTRRSDYQLT | IEPLLEQEAD | GAAPQLTASR | LLQRRQIFSQ |
| 310 | 320 | 330 | 340 | 350 | 360 |
| KLVEHVKEHH | KAFLASLSPA | MVVPEDQLTR | WHPRFNVDEV | PDIEPAALPQ | PPATEKLTTA |
| 370 | 380 | 390 | 400 | 410 | 420 |
| QEVLARARNL | ISPRMEKALS | QLALRSAAPS | SPGSPRPALP | ATPPATPPAA | SPSALKGVSQ |
| 430 | 440 | 450 | 460 | 470 | 480 |
| DLLERIRAKE | AQKQLAQMTR | CPEQEQRLQR | LERLPELARV | LRSVFVSERK | PALSMEVACA |
| 490 | 500 | 510 | 520 | 530 | 540 |
| RMVGSCCTIM | SPGEMEKHLL | LLSELLPDWL | SLHRIRTDTY | VKLDKAADLA | HITARLAHQT |
| RAEEGL |