Q9FMY7
Gene name |
ZHD13 (HB27, At5g42780, MJB21.16) |
Protein name |
Zinc-finger homeodomain protein 13 |
Names |
AtZHD13, Homeobox protein 27, AtHB-27 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G42780 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9FMY7
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9FMY7-F1 | Predicted | AlphaFoldDB |
55 variants for Q9FMY7
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_5_17154849_G_C | 3 | E>D | No | 1000Genomes | |
| tmp_5_17154860_A_T | 7 | K>M | No | 1000Genomes | |
| tmp_5_17154877_A_G | 13 | K>E | No | 1000Genomes | |
| tmp_5_17154889_A_C | 17 | N>H | No | 1000Genomes | |
| tmp_5_17154893_T_C | 18 | V>A | No | 1000Genomes | |
| ENSVATH07307661 | 18 | V>I | No | 1000Genomes | |
| tmp_5_17154896_A_C | 19 | K>T | No | 1000Genomes | |
| tmp_5_17154898_C_G | 20 | P>A | No | 1000Genomes | |
| tmp_5_17154902_T_C | 21 | I>T | No | 1000Genomes | |
| ENSVATH12399379 | 23 | R>G | No | 1000Genomes | |
| ENSVATH00697853 | 25 | T>I | No | 1000Genomes | |
| ENSVATH12399380 | 25 | T>P | No | 1000Genomes | |
| tmp_5_17154916_G_C | 26 | G>R | No | 1000Genomes | |
| tmp_5_17154917_G_T | 26 | G>V | No | 1000Genomes | |
| ENSVATH12399382 | 39 | P>S | No | 1000Genomes | |
| ENSVATH03326514 | 43 | R>S | No | 1000Genomes | |
| ENSVATH12399383 | 44 | T>P | No | 1000Genomes | |
| ENSVATH07307664 | 48 | P>L | No | 1000Genomes | |
| ENSVATH07307664 | 48 | P>Q | No | 1000Genomes | |
| ENSVATH07307665 | 49 | P>S | No | 1000Genomes | |
| tmp_5_17154989_C_G,T | 50 | P>L | No | 1000Genomes | |
| tmp_5_17154989_C_G,T | 50 | P>R | No | 1000Genomes | |
| tmp_5_17154997_G_C | 53 | D>H | No | 1000Genomes | |
| ENSVATH00697854 | 65 | Y>F | No | 1000Genomes | |
| ENSVATH00697855 | 88 | S>G | No | 1000Genomes | |
| ENSVATH07307669 | 94 | D>N | No | 1000Genomes | |
| ENSVATH12399398 | 97 | N>K | No | 1000Genomes | |
| ENSVATH00697856 | 99 | A>V | No | 1000Genomes | |
| ENSVATH07307670 | 102 | G>C | No | 1000Genomes | |
| tmp_5_17155150_C_T | 104 | H>Y | No | 1000Genomes | |
| ENSVATH07307671 | 112 | L>I | No | 1000Genomes | |
| tmp_5_17155177_A_C | 113 | I>L | No | 1000Genomes | |
| ENSVATH07307672 | 122 | T>K | No | 1000Genomes | |
| ENSVATH07307673 | 123 | V>I | No | 1000Genomes | |
| ENSVATH00697857 | 128 | K>R | No | 1000Genomes | |
| ENSVATH12399400 | 132 | C>Y | No | 1000Genomes | |
| ENSVATH12399401 | 145 | G>E | No | 1000Genomes | |
| tmp_5_17155280_G_T | 147 | S>I | No | 1000Genomes | |
| tmp_5_17155286_G_A | 149 | G>E | No | 1000Genomes | |
| ENSVATH07307675 | 151 | K>T | No | 1000Genomes | |
| tmp_5_17155297_A_G | 153 | K>E | No | 1000Genomes | |
| ENSVATH07307677 | 158 | S>N | No | 1000Genomes | |
| ENSVATH07307678 | 161 | G>W | No | 1000Genomes | |
| tmp_5_17155328_C_G | 163 | P>R | No | 1000Genomes | |
| ENSVATH07307679 | 163 | P>T | No | 1000Genomes | |
|
ENSVATH14571373 tmp_5_17155347_C_A |
169 | F>L | No | 1000Genomes | |
| ENSVATH07307680 | 170 | G>V | No | 1000Genomes | |
| ENSVATH12399402 | 175 | E>K | No | 1000Genomes | |
| tmp_5_17155426_G_A | 196 | D>N | No | 1000Genomes | |
| ENSVATH12399403 | 203 | W>* | No | 1000Genomes | |
| tmp_5_17155477_G_A | 213 | V>I | No | 1000Genomes | |
| ENSVATH07307681 | 226 | N>T | No | 1000Genomes | |
| tmp_5_17155549_A_C | 237 | K>Q | No | 1000Genomes | |
| tmp_5_17155559_T_C | 240 | I>T | No | 1000Genomes | |
| tmp_5_17155563_T_G | 241 | D>E | No | 1000Genomes |
No associated diseases with Q9FMY7
Functions
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
5 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| DNA-binding transcription factor activity | A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. |
| metal ion binding | Binding to a metal ion. |
| protein homodimerization activity | Binding to an identical protein to form a homodimer. |
| transcription cis-regulatory region binding | Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| regulation of DNA-templated transcription | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9ZPW7 | ZHD6 | Zinc-finger homeodomain protein 6 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDEIKPKKEE | NSKRRRNVKP | ICRETGDHVH | YLPTCKTKPK | PTRTHHAPPP | ILDSIFKVTH |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KPHYYECRKN | HAADIGTTAY | DGCGEFVSST | GEEDSLNCAA | CGCHRNFHRE | ELIPENGGVT |
| 130 | 140 | 150 | 160 | 170 | 180 |
| ETVLEVLKIS | SCQFRRIFCS | PYGGGKSEGK | KKKKEKESYG | GDPIIKDRFG | GAEEEEGIVK |
| 190 | 200 | 210 | 220 | 230 | 240 |
| RLKTKFTAEQ | TEKMRDYAEK | LRWKVRPERQ | EEVEEFCVEI | GVNRKNFRIW | MNNHKDKIII |
| DE |