Q9C9R6
PR
Gene name |
APUM7 (At1g78160, T11I11.10) |
Protein name |
Putative pumilio homolog 7, chloroplastic |
Names |
APUM-7, AtPUM7 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT1G78160 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9C9R6
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9C9R6-F1 | Predicted | AlphaFoldDB |
76 variants for Q9C9R6
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_1_29407912_C_T | 5 | R>C | No | 1000Genomes | |
| ENSVATH13832408 | 26 | N>K | No | 1000Genomes | |
| ENSVATH00147459 | 54 | N>S | No | 1000Genomes | |
| tmp_1_29408069_G_C | 57 | C>S | No | 1000Genomes | |
| ENSVATH13832411 | 67 | S>F | No | 1000Genomes | |
| ENSVATH00147461 | 69 | P>S | No | 1000Genomes | |
| ENSVATH05166060 | 73 | G>R | No | 1000Genomes | |
| ENSVATH05166061 | 96 | H>R | No | 1000Genomes | |
| ENSVATH05166062 | 99 | S>G | No | 1000Genomes | |
| ENSVATH13832412 | 101 | V>G | No | 1000Genomes | |
| tmp_1_29408215_G_A | 106 | D>N | No | 1000Genomes | |
| tmp_1_29408240_A_G | 114 | Y>C | No | 1000Genomes | |
| tmp_1_29408270_A_G | 124 | E>G | No | 1000Genomes | |
| ENSVATH01553678 | 141 | K>M | No | 1000Genomes | |
| ENSVATH01553678 | 141 | K>R | No | 1000Genomes | |
| tmp_1_29408344_C_T | 149 | P>S | No | 1000Genomes | |
| tmp_1_29408347_G_A | 150 | D>N | No | 1000Genomes | |
| ENSVATH14490606 | 163 | S>I | No | 1000Genomes | |
| ENSVATH00147462 | 165 | G>S | No | 1000Genomes | |
| ENSVATH01553680 | 179 | P>L | No | 1000Genomes | |
| ENSVATH13832414 | 185 | I>S | No | 1000Genomes | |
| ENSVATH00147463 | 192 | W>L | No | 1000Genomes | |
| ENSVATH01553681 | 192 | W>R | No | 1000Genomes | |
| ENSVATH05166064 | 193 | S>C | No | 1000Genomes | |
| tmp_1_29408552_G_T | 218 | S>I | No | 1000Genomes | |
| tmp_1_29408558_C_T | 220 | S>L | No | 1000Genomes | |
| ENSVATH00147464 | 230 | N>S | No | 1000Genomes | |
| tmp_1_29408593_G_T | 232 | G>C | No | 1000Genomes | |
| ENSVATH00147465 | 240 | G>V | No | 1000Genomes | |
| ENSVATH05166065 | 257 | S>F | No | 1000Genomes | |
| ENSVATH01553682 | 261 | Q>K | No | 1000Genomes | |
| tmp_1_29408699_C_T | 267 | T>I | No | 1000Genomes | |
| ENSVATH13832429 | 269 | D>N | No | 1000Genomes | |
| ENSVATH13832429 | 269 | D>Y | No | 1000Genomes | |
| ENSVATH01553684 | 270 | I>M | No | 1000Genomes | |
| tmp_1_29408723_G_A | 275 | C>Y | No | 1000Genomes | |
| ENSVATH05166066 | 276 | Q>R | No | 1000Genomes | |
| tmp_1_29408728_C_T | 277 | R>* | No | 1000Genomes | |
| tmp_1_29408732_C_G | 278 | T>S | No | 1000Genomes | |
| tmp_1_29408734_C_A | 279 | Q>K | No | 1000Genomes | |
| tmp_1_29408740_C_T | 281 | P>S | No | 1000Genomes | |
| tmp_1_29408759_C_T | 287 | S>F | No | 1000Genomes | |
| tmp_1_29408764_C_T | 289 | P>S | No | 1000Genomes | |
| tmp_1_29408776_G_A | 293 | D>N | No | 1000Genomes | |
| tmp_1_29408806_A_T | 303 | I>F | No | 1000Genomes | |
| ENSVATH00147466 | 311 | R>Q | No | 1000Genomes | |
| tmp_1_29408843_C_A | 315 | S>Y | No | 1000Genomes | |
| ENSVATH00147467 | 320 | P>S | No | 1000Genomes | |
| ENSVATH05166067 | 321 | T>M | No | 1000Genomes | |
| ENSVATH13832433 | 325 | H>Y | No | 1000Genomes | |
| tmp_1_29408887_A_T | 330 | N>Y | No | 1000Genomes | |
| tmp_1_29408911_G_A | 338 | V>I | No | 1000Genomes | |
| tmp_1_29408974_A_G | 359 | T>A | No | 1000Genomes | |
| tmp_1_29408983_G_C | 362 | D>H | No | 1000Genomes | |
| tmp_1_29408991_G_A | 364 | M>I | No | 1000Genomes | |
| ENSVATH14490607 | 401 | Q>R | No | 1000Genomes | |
| ENSVATH00147471 | 403 | V>M | No | 1000Genomes | |
| ENSVATH13832435 | 408 | E>K | No | 1000Genomes | |
| ENSVATH00147472 | 410 | P>L | No | 1000Genomes | |
| ENSVATH00147473 | 420 | A>S | No | 1000Genomes | |
| ENSVATH13832436 | 430 | V>L | No | 1000Genomes | |
| tmp_1_29409337_T_C | 454 | I>T | No | 1000Genomes | |
| tmp_1_29409349_A_T | 458 | N>I | No | 1000Genomes | |
| tmp_1_29409538_G_A | 493 | R>Q | No | 1000Genomes | |
| tmp_1_29409587_A_T | 509 | Q>H | No | 1000Genomes | |
| tmp_1_29409589_A_G | 510 | Q>R | No | 1000Genomes | |
| ENSVATH05166070 | 513 | K>E | No | 1000Genomes | |
| ENSVATH01553687 | 514 | L>V | No | 1000Genomes | |
| tmp_1_29409743_T_C | 535 | V>A | No | 1000Genomes | |
| ENSVATH05166071 | 538 | V>I | No | 1000Genomes | |
| tmp_1_29409805_G_A | 556 | G>R | No | 1000Genomes | |
| tmp_1_29409860_G_C | 574 | C>S | No | 1000Genomes | |
| tmp_1_29409904_C_A | 589 | L>I | No | 1000Genomes | |
| ENSVATH00147474 | 614 | A>V | No | 1000Genomes | |
| tmp_1_29409985_A_T | 616 | K>* | No | 1000Genomes | |
| ENSVATH01553690 | 635 | N>H | No | 1000Genomes |
No associated diseases with Q9C9R6
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| post-transcriptional regulation of gene expression | Any process that modulates the frequency, rate or extent of gene expression after the production of an RNA transcript. |
| regulation of translation | Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9LDW3 | APUM11 | Pumilio homolog 11 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDEFREASSV | SSSPSTPLRT | PLHSPNLFNG | DFSVSNRFSF | KSSSDYSLSS | SFSNGLCSPE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DSSSPFSSPP | FNGIIPKHNH | TSSSPVSFDS | LFFKDHEKSH | VNGTDDLGLC | EDLYRMNIKE |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DVEEDQIRYA | RTETLKDPLP | KSDHTDFTPD | PLYNFSPKHY | EPSNGGFVSG | GFPYGFFRPP |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KESSINQSCA | SWSGFDQSKN | DDKRNMFGNN | PQQFGWPSYS | SSNSGTSPYN | NGQEIFENRG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| GMREYSAYSP | PHQPEVSYKH | QNYRTTTSDI | LPLFCQRTQV | PMVSKCSEPF | SSDESFFMNG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| KSIDHQRSNT | RALMSNNGNP | TEICHPSLPN | MCDIQGYVYL | MAKDQHGCRF | LQRIFDEGTS |
| 370 | 380 | 390 | 400 | 410 | 420 |
| VDAMIIFNEV | IAHVVELMMD | PFGNYLMQKL | LDVCTEEQRT | QIVLVATEEP | GQLIRISLNA |
| 430 | 440 | 450 | 460 | 470 | 480 |
| YGTRVVQRLV | ETIRSGKQIS | LVKLALRPGF | LDLIKDLNGN | HVIQRCLQCL | STEDNKFIFD |
| 490 | 500 | 510 | 520 | 530 | 540 |
| AATKFCTEIA | THRHGCCVLQ | KCIAYSMRQQ | REKLIAEISR | NSLLLAQDPF | GNYAVQFVIE |
| 550 | 560 | 570 | 580 | 590 | 600 |
| LRIPSAVAMM | LAQLKGHYVQ | LSMQKFSSHM | VERCLMHCPE | SRPQIVRELV | SVPHFDQLLQ |
| 610 | 620 | 630 | 640 | ||
| DPYANFVIQA | ALAATKGPLH | ASLVEVIRPH | SILRNNPYCK | RIFSRNLLKK |