Q9BXT2
Gene name |
CACNG6 |
Protein name |
Voltage-dependent calcium channel gamma-6 subunit |
Names |
Neuronal voltage-gated calcium channel gamma-6 subunit |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:59285 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9BXT2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9BXT2-F1 | Predicted | AlphaFoldDB |
248 variants for Q9BXT2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA9641282 rs747728201 |
2 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA407421667 rs1180425373 |
3 | W>G | No |
ClinGen TOPMed |
|
|
CA9641283 rs771562119 |
3 | W>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 3 | W>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9641284 rs771562119 |
3 | W>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA407421672 rs1418137187 |
4 | S>P | No |
ClinGen gnomAD |
|
|
CA407421697 rs1568809492 |
7 | F>Y | No |
ClinGen Ensembl |
|
|
rs759591468 CA9641288 |
9 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9641287 rs776676191 |
9 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1464722443 CA407421719 |
10 | E>D | No |
ClinGen gnomAD |
|
|
rs1177207677 CA407421713 |
10 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1265538561 CA407421735 |
12 | N>K | No |
ClinGen TOPMed |
|
|
CA407421738 rs1434492187 |
13 | R>Q | No |
ClinGen gnomAD |
|
|
rs765284445 CA9641291 |
13 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs775391041 CA9641293 |
14 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs904562967 CA310074647 |
15 | R>L | No |
ClinGen TOPMed |
|
|
CA407421748 rs904562967 |
15 | R>P | No |
ClinGen TOPMed |
|
| TCGA novel | 16 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs567490160 CA310074656 |
16 | G>R | No |
ClinGen 1000Genomes |
|
|
rs763098225 CA9641295 |
17 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA407421759 rs1310285013 |
18 | A>T | No |
ClinGen gnomAD |
|
| TCGA novel | 18 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA407421771 rs1381311270 |
20 | R>G | No |
ClinGen gnomAD |
|
|
COSM1283905 rs1437887891 CA407421773 |
20 | R>Q | autonomic_ganglia Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs975999615 CA310074660 |
21 | R>W | No |
ClinGen TOPMed |
|
|
rs534917640 CA9641299 |
22 | R>L | Variant assessed as Somatic; 0.0002636 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA9641298 rs751864902 |
22 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA407421785 rs1254383125 |
23 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
CA407421783 rs1254383125 |
23 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA310074665 rs756574726 |
24 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750808856 CA9641301 |
24 | H>R | No |
ClinGen ExAC |
|
|
CA9641303 CA9641304 rs780619316 |
25 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs571070238 CA310074681 |
26 | Q>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1324469035 CA407421827 |
30 | G>W | No |
ClinGen gnomAD |
|
|
CA407421831 rs1600050818 |
31 | L>M | No |
ClinGen Ensembl |
|
|
rs1202803677 CA407421841 |
32 | T>M | No |
ClinGen gnomAD |
|
|
CA9641306 rs377123441 |
33 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1456951506 CA407421847 |
34 | E>K | No |
ClinGen gnomAD |
|
|
CA407421857 rs1157004921 |
35 | R>C | No |
ClinGen gnomAD |
|
|
rs1157004921 CA407421855 |
35 | R>S | No |
ClinGen gnomAD |
|
|
CA310074690 rs1036759489 |
36 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1292870872 CA407421868 |
37 | G>R | No |
ClinGen gnomAD |
|
|
rs1274648976 CA407421881 |
38 | K>N | No |
ClinGen TOPMed |
|
|
CA407421903 rs1466236183 |
42 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA9641307 rs746712453 |
42 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA407421920 rs1288550635 |
45 | L>P | No |
ClinGen gnomAD |
|
|
rs1274494247 CA407421930 |
47 | A>V | No |
ClinGen gnomAD |
|
|
rs1300073085 CA407421938 |
48 | V>G | No |
ClinGen TOPMed |
|
|
CA407421935 rs1334992717 |
48 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1420256309 CA407421952 |
51 | T>A | No |
ClinGen TOPMed |
|
|
rs1374712691 CA407421955 |
51 | T>R | No |
ClinGen TOPMed |
|
|
CA9641309 rs776514934 |
54 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs776514934 CA407421968 |
54 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs970294628 CA310074739 |
57 | V>A | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 57 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1179287231 CA407422000 |
59 | T>I | No |
ClinGen gnomAD |
|
|
CA407422011 rs1253047443 |
61 | F>V | No |
ClinGen gnomAD |
|
|
CA310074744 rs984405608 |
62 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
CA407422024 rs984405608 |
62 | W>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1472378497 CA407422018 |
62 | W>R | No |
ClinGen gnomAD |
|
|
rs745685098 CA9641310 |
65 | L>P | No |
ClinGen ExAC |
|
|
CA310074765 rs963016013 |
67 | T>I | No |
ClinGen gnomAD |
|
|
CA407422061 rs1348088785 |
68 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA407422081 rs1349709376 |
71 | N>D | No |
ClinGen gnomAD |
|
|
CA407422089 rs1256925959 |
72 | G>D | No |
ClinGen TOPMed |
|
|
CA310074766 rs971738195 |
72 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA407422102 rs1310006128 |
74 | A>S | No |
ClinGen gnomAD |
|
|
CA407422100 rs1310006128 |
74 | A>T | No |
ClinGen gnomAD |
|
|
CA407422105 rs1280189517 |
74 | A>V | No |
ClinGen TOPMed |
|
|
rs905402727 CA310074772 |
75 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs905402727 CA407422106 |
75 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA407422114 rs1275790837 |
76 | C>Y | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 77 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1482934316 CA407422119 |
77 | E>K | No |
ClinGen gnomAD |
|
|
CA407422127 rs1203211487 |
78 | A>T | No |
ClinGen gnomAD |
|
|
rs933088105 CA310074788 |
79 | A>D | No |
ClinGen Ensembl |
|
|
CA310074792 rs372908944 |
80 | H>Y | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1326306974 CA407422153 |
82 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1169218943 CA407422167 |
84 | W>* | No |
ClinGen gnomAD |
|
|
CA310074835 rs1052032776 |
85 | K>* | No |
ClinGen gnomAD |
|
|
CA407422170 rs1052032776 |
85 | K>E | No |
ClinGen gnomAD |
|
|
rs1052032776 CA310074829 |
85 | K>Q | No |
ClinGen gnomAD |
|
|
rs1600051315 CA407422186 |
87 | C>F | No |
ClinGen Ensembl |
|
| TCGA novel | 87 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9641314 rs375730739 |
88 | T>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1281908574 CA407422199 |
89 | K>M | No |
ClinGen gnomAD |
|
|
CA407422195 rs1446897796 |
89 | K>Q | No |
ClinGen gnomAD |
|
|
CA310074862 rs1042979812 |
90 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA407422206 rs1042979812 |
90 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA407422205 rs1042979812 |
90 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA407422204 rs1363538160 |
90 | R>W | No |
ClinGen gnomAD |
|
|
CA407422218 rs1444598359 |
92 | W>* | No |
ClinGen TOPMed |
|
|
rs761974235 CA9641316 |
94 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA407422233 rs761974235 COSM221864 |
94 | A>V | skin [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1341832801 CA407422238 |
95 | D>G | No |
ClinGen gnomAD |
|
|
rs1198345312 CA407422236 |
95 | D>Y | No |
ClinGen TOPMed |
|
|
CA310074892 rs1020387029 |
98 | V>A | No |
ClinGen TOPMed |
|
|
CA407422254 rs1600051429 |
98 | V>M | No |
ClinGen Ensembl |
|
|
rs967029106 CA310074893 |
102 | T>I | No |
ClinGen TOPMed |
|
|
rs1281222791 CA407422293 |
103 | C>W | No |
ClinGen gnomAD |
|
|
rs1600051480 CA407422305 |
105 | P>R | No |
ClinGen Ensembl |
|
|
rs1443198325 CA407422303 COSM1199394 |
105 | P>S | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
| TCGA novel | 106 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA407422309 rs1235805731 |
106 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA310074895 rs998781294 |
106 | A>V | No |
ClinGen gnomAD |
|
|
rs1568810143 CA407422315 |
107 | E>A | No |
ClinGen Ensembl |
|
|
rs1053131701 CA310074902 |
108 | L>P | No |
ClinGen Ensembl |
|
|
CA407422325 rs1189072721 |
109 | P>S | No |
ClinGen gnomAD |
|
|
rs1334868409 CA407422366 |
113 | N>D | No |
ClinGen TOPMed |
|
|
CA407422391 rs1159450845 |
116 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA9641334 rs772227869 |
118 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA407422416 rs1281697505 COSM170920 |
119 | F>L | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA407422436 rs773485518 |
122 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA9641335 rs773485518 |
122 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1324105128 CA407422440 |
123 | G>E | No |
ClinGen TOPMed |
|
|
CA407422443 rs1267579555 |
124 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs111762316 CA310079087 |
126 | A>E | No |
ClinGen TOPMed |
|
|
COSM2157068 CA9641337 rs78495589 |
127 | R>C | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs113933127 CA9641339 |
127 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs78495589 CA9641338 |
127 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA407422494 rs1450779483 COSM1000948 |
131 | R>I | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs765689814 CA9641340 |
133 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751043752 CA9641342 |
134 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756840959 CA9641343 |
135 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1278714201 CA407422686 |
137 | V>L | No |
ClinGen TOPMed |
|
|
CA407422709 rs1430827048 |
139 | L>R | No |
ClinGen gnomAD |
|
|
CA310080102 rs1008631687 |
140 | A>V | No |
ClinGen Ensembl |
|
|
CA407422724 rs149636959 |
142 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9641364 rs149636959 COSM1612759 |
142 | A>V | liver [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
| TCGA novel | 143 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9641366 rs562607079 |
146 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1242438641 CA407422757 |
148 | G>C | No |
ClinGen gnomAD |
|
|
rs748127619 CA9641368 |
148 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA310080160 rs1000047377 |
149 | L>P | No |
ClinGen Ensembl |
|
|
CA9641369 rs758453533 |
150 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1484017391 CA407422780 |
152 | M>R | No |
ClinGen gnomAD |
|
|
CA9641370 rs777776975 |
153 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1392597613 CA407422824 |
156 | C>* | No |
ClinGen gnomAD |
|
|
rs1440209352 CA407422818 |
156 | C>S | No |
ClinGen gnomAD |
|
|
rs771115010 CA9641372 |
157 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs776728706 CA9641373 |
158 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA407422834 rs202066966 |
158 | C>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9641374 rs202066966 |
158 | C>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs770346942 CA9641375 |
159 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1475086965 CA407422869 |
162 | V>M | No |
ClinGen TOPMed |
|
|
rs61737876 CA407422879 |
163 | L>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9641376 rs61737876 |
163 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 168 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA407422990 rs141391745 |
172 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9641378 rs141391745 |
172 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9641379 rs764730263 |
172 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9641381 rs772783786 |
175 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA310080221 rs867455460 |
175 | A>T | No |
ClinGen Ensembl |
|
|
rs147457475 CA9641384 |
176 | V>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM301862 rs147457475 CA9641383 |
176 | V>I | Variant assessed as Somatic; 0.0 impact. central_nervous_system endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1342208430 CA407423037 |
177 | C>S | No |
ClinGen gnomAD |
|
|
rs754774879 CA9641385 |
177 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA407424941 rs1221613153 |
184 | L>V | No |
ClinGen gnomAD |
|
|
rs1223020993 CA407424957 |
186 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA9641413 rs780438713 |
187 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1265224129 CA407424960 |
187 | V>L | No |
ClinGen gnomAD |
|
|
CA310086905 rs899129997 |
188 | S>T | No |
ClinGen Ensembl |
|
|
CA9641414 rs749657710 |
189 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA407424971 rs1252850018 |
189 | L>V | No |
ClinGen gnomAD |
|
|
rs769213773 CA9641415 |
190 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs139947484 CA9641418 |
193 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA310086920 rs139947484 |
193 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1308221230 CA407425016 |
196 | V>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1431426229 CA407425013 |
196 | V>L | No |
ClinGen gnomAD |
|
|
CA407425020 rs775961001 |
197 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9641420 rs775961001 |
197 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374782267 CA9641421 COSM1000949 |
198 | A>T | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA9641422 rs769376031 |
198 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA407425037 rs1357690026 |
200 | L>R | No |
ClinGen gnomAD |
|
|
CA407425034 rs1314992037 |
200 | L>V | No |
ClinGen gnomAD |
|
|
CA407425050 rs1482841848 |
202 | R>I | No |
ClinGen gnomAD |
|
|
rs775178620 CA9641424 |
202 | R>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 202 | R>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs763833590 CA9641426 |
204 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA310086957 rs751492357 |
205 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751492357 CA9641427 |
205 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA407425113 rs761605328 |
207 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs761605328 CA9641428 |
207 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA9641430 rs767495494 |
208 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA407425126 rs1303401046 |
208 | P>S | No |
ClinGen TOPMed |
|
|
rs369729281 CA9641431 |
209 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs369729281 CA9641432 |
209 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| rs745648688 | 209 | P>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA407425137 rs1177798062 |
209 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA310086975 rs576293186 |
210 | A>T | No |
ClinGen Ensembl |
|
|
CA407425153 rs1334167657 |
210 | A>V | No |
ClinGen gnomAD |
|
|
rs201389291 CA9641435 |
212 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA407425179 rs1339141094 |
212 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA407425177 rs1339141094 |
212 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs201389291 CA407425170 |
212 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1256633844 CA407425205 |
214 | T>S | No |
ClinGen TOPMed |
|
|
CA310087012 rs936337599 CA407425219 |
215 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
rs369577894 CA9641437 |
215 | Y>C | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
rs369577894 CA310087002 |
215 | Y>S | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
rs758762265 CA9641438 |
216 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs145464848 CA9641439 |
217 | Y>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 217 | Y>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA407425270 rs988571477 |
218 | S>F | No |
ClinGen TOPMed |
|
|
CA310087018 rs913639979 |
218 | S>P | No |
ClinGen Ensembl |
|
|
CA310087038 rs988571477 |
218 | S>Y | No |
ClinGen TOPMed |
|
| TCGA novel | 220 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA407425352 rs199614002 |
223 | C>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA407425339 rs1242844088 |
223 | C>S | No |
ClinGen TOPMed |
|
|
CA407425354 rs199614002 |
223 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9641442 rs775091115 |
224 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9641443 rs775091115 |
224 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA310087064 rs200480751 |
225 | V>A | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs949111352 CA310087056 |
225 | V>M | No |
ClinGen Ensembl |
|
|
TCGA novel rs773976957 CA9641446 |
226 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC TOPMed gnomAD NCI-TCGA |
|
rs761682241 CA9641447 |
227 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA407425384 rs761682241 |
227 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9641449 rs773351063 |
228 | G>C | No |
ClinGen ExAC gnomAD |
|
|
rs1462726750 CA407425423 |
230 | I>T | No |
ClinGen gnomAD |
|
|
CA9641451 rs766617187 |
231 | L>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 232 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9641453 rs755120014 |
234 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA310087073 rs376472409 |
235 | A>T | No |
ClinGen gnomAD |
|
|
rs1209217743 CA407425482 |
236 | G>R | No |
ClinGen gnomAD |
|
|
CA407425499 rs1283507653 |
237 | C>Y | No |
ClinGen gnomAD |
|
|
CA9641454 rs765496615 |
240 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
CA9641455 rs752943229 |
241 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 242 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA407425623 rs778136049 |
243 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9641457 rs778136049 |
243 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1208348484 CA407425633 |
244 | P>A | No |
ClinGen TOPMed |
|
|
CA310087090 rs866833754 |
244 | P>L | No |
ClinGen Ensembl |
|
|
CA407425670 rs755597457 |
245 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA9641459 rs755597457 |
245 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA9641460 rs61738518 |
247 | P>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1325932310 CA407425725 |
248 | W>G | No |
ClinGen gnomAD |
|
|
CA9641462 rs768136238 |
250 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs12980121 VAR_061540 CA9641463 |
252 | C>S | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
COSM1526191 CA9641464 rs747892500 |
254 | K>R | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA9641465 rs148905506 |
255 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1351452611 CA407425850 |
255 | R>W | No |
ClinGen TOPMed |
|
|
CA9641467 rs760644366 CA407425865 |
256 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA407425891 rs1490128018 |
257 | H>R | No |
ClinGen gnomAD |
|
| TCGA novel | 257 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9641469 rs776788761 |
258 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1219732417 CA407425903 |
258 | R>W | Variant assessed as Somatic; 7.343e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA9641470 rs200238789 |
259 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9641471 rs200238789 |
259 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs370862252 COSM1582427 CA9641472 |
260 | T>N | stomach [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
No associated diseases with Q9BXT2
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| L-type voltage-gated calcium channel complex | A type of voltage-dependent calcium channel responsible for excitation-contraction coupling of skeletal, smooth, and cardiac muscle. 'L' stands for 'long-lasting' referring to the length of activation. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| voltage-gated calcium channel complex | A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium channel regulator activity | Modulates the activity of a calcium channel. |
| voltage-gated calcium channel activity | Enables the transmembrane transfer of a calcium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| calcium ion transport | The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| regulation of calcium ion transmembrane transport via high voltage-gated calcium channel | Any process that modulates the frequency, rate or extent of generation of calcium ion transmembrane transport via high voltage-gated calcium channel. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q8VHW3 | Cacng6 | Voltage-dependent calcium channel gamma-6 subunit | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MMWSNFFLQE | ENRRRGAAGR | RRAHGQGRSG | LTPEREGKVK | LALLLAAVGA | TLAVLSVGTE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| FWVELNTYKA | NGSAVCEAAH | LGLWKACTKR | LWQADVPVDR | DTCGPAELPG | EANCTYFKFF |
| 130 | 140 | 150 | 160 | 170 | 180 |
| TTGENARIFQ | RTTKKEVNLA | AAVIAVLGLA | VMALGCLCII | MVLSKGAEFL | LRVGAVCFGL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SGLLLLVSLE | VFRHSVRALL | QRVSPEPPPA | PRLTYEYSWS | LGCGVGAGLI | LLLGAGCFLL |
| 250 | |||||
| LTLPSWPWGS | LCPKRGHRAT |