Q96N76
Gene name |
UROC1 |
Protein name |
Urocanate hydratase |
Names |
Urocanase, Imidazolonepropionate hydrolase |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:131669 |
EC number |
4.2.1.49: Hydro-lyases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q96N76
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q96N76-F1 | Predicted | AlphaFoldDB |
691 variants for Q96N76
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV000193396 rs147828466 RCV000765705 COSM1593287 COSM1037774 CA206855 |
14 | R>W | endometrium Urocanate hydratase deficiency [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs184621973 CA2591721 RCV002505482 RCV000974009 COSM4138402 COSM4138403 |
20 | R>Q | ovary Urocanate hydratase deficiency [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000000435 CA114250 rs137852796 VAR_062649 |
70 | L>P | Urocanate hydratase deficiency UROCD [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
RCV000971737 VAR_034000 rs34488036 RCV002488059 CA2591493 |
188 | R>W | Urocanate hydratase deficiency [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
COSM1418655 RCV001334555 rs751617501 COSM1418654 CA2591454 |
214 | G>S | Variant assessed as Somatic; 0.0 impact. large_intestine Urocanate hydratase deficiency [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs781621925 RCV001250106 CA2591341 |
285 | W>* | Variant assessed as Somatic; 0.0 impact. Urocanate hydratase deficiency [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
rs202232611 RCV000899767 CA2591342 RCV000791066 |
285 | W>* | Urocanate hydratase deficiency [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA2591225 RCV000728205 RCV002533086 rs377309471 |
324 | R>C | Variant assessed as Somatic; 0.0 impact. Inborn genetic diseases [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
VAR_060221 CA114248 rs137852795 RCV000000434 |
450 | R>C | Variant assessed as Somatic; 0.0 impact. Urocanate hydratase deficiency UROCD; loss of activity [NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1935770465 RCV001250102 |
483 | S>missing | Urocanate hydratase deficiency [ClinVar] | Yes |
ClinVar dbSNP |
|
rs759882583 RCV000480441 CA2591012 RCV002525931 |
490 | D>N | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs759932171 CA2591737 |
3 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1560131464 CA354320764 |
3 | S>T | No |
ClinGen Ensembl |
|
|
CA83257748 rs996153552 |
4 | L>P | No |
ClinGen gnomAD |
|
|
CA2591735 rs200446368 |
6 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2591732 rs768418106 |
7 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs749257323 CA2591731 |
9 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs1430028124 CA354320681 |
9 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
CA354320647 rs1474785990 |
12 | P>T | No |
ClinGen gnomAD |
|
|
CA2591727 rs780052973 |
13 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2591728 rs780052973 |
13 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2591725 rs777933935 |
14 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA83257705 rs574853149 |
16 | L>R | No |
ClinGen Ensembl |
|
|
CA354320580 rs1275358661 |
18 | E>K | No |
ClinGen gnomAD |
|
|
CA2591722 rs184621973 |
20 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA354320543 rs184621973 |
20 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs753170886 CA2591723 |
20 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1333954474 CA354320537 |
21 | G>R | No |
ClinGen TOPMed |
|
|
rs1284787601 CA354320531 |
21 | G>V | No |
ClinGen gnomAD |
|
|
rs527715107 CA2591719 |
22 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs761537039 CA2591718 |
22 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1576737622 CA354320514 |
23 | Q>R | No |
ClinGen Ensembl |
|
|
rs763688533 CA2591716 |
24 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA2591715 rs762604638 |
25 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1576737603 CA354320498 |
26 | V>G | No |
ClinGen Ensembl |
|
|
CA2591714 rs775557255 |
26 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs146471695 CA354320494 |
27 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2591712 rs146471695 |
27 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA354339252 rs1474200582 |
29 | A>D | No |
ClinGen gnomAD |
|
|
rs1256676234 CA354339247 |
30 | P>S | No |
ClinGen gnomAD |
|
|
rs754789566 CA83296306 |
31 | V>D | No |
ClinGen Ensembl |
|
|
rs964334558 CA354339242 |
31 | V>F | No |
ClinGen TOPMed gnomAD |
|
|
CA83296318 rs964334558 |
31 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA2591710 rs560271047 |
33 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs560271047 CA2591709 |
33 | T>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1347513754 CA354339216 |
35 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1437405781 CA354339192 |
39 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1437405781 CA354339193 |
39 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1560131287 CA354339179 |
41 | K>E | No |
ClinGen Ensembl |
|
|
CA354339147 rs760513235 |
43 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs760513235 CA2591674 |
43 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
CA354339142 rs1252472477 |
44 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA354339140 rs1252472477 |
44 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs200539848 CA2591672 |
47 | N>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA2591670 rs774371917 |
48 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 48 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2591669 rs151076375 |
49 | L>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1282834500 CA354339110 |
50 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs749388303 CA2591668 |
50 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354339107 rs749388303 |
50 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2591667 rs746191170 |
52 | F>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746191170 CA2591666 |
52 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2591665 rs746191170 |
52 | F>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1576730716 CA354339092 |
53 | P>A | No |
ClinGen Ensembl |
|
|
CA354339088 rs1576730710 |
53 | P>L | No |
ClinGen Ensembl |
|
|
rs758085216 CA2591663 |
54 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| rs764241328 | 54 | P>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747772496 CA2591658 |
55 | D>G | No |
ClinGen ExAC |
|
| rs764241328 | 55 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA354339073 rs1560127923 |
56 | V>I | No |
ClinGen Ensembl |
|
|
rs1576730662 CA354339067 |
57 | Q>* | No |
ClinGen Ensembl |
|
|
CA2591657 rs778758625 |
58 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA2591656 COSM1149597 COSM727667 rs754495263 |
61 | A>S | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1338435550 CA354339040 |
61 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs73859506 CA2591654 RCV000969458 |
65 | A>S | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs73859506 CA354339017 |
65 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs756019777 CA2591653 |
66 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs201516841 CA2591652 |
67 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA354339005 rs1394668300 |
67 | E>K | No |
ClinGen gnomAD |
|
|
rs764292132 CA2591649 |
71 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775450030 CA2591647 |
72 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2591645 rs146872522 |
75 | Y>C | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 75 | Y>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 76 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA354338946 rs143914676 |
76 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs747433719 CA2591642 |
76 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA2591643 rs143914676 |
76 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA83290037 COSM1616841 rs1046405146 COSM1616840 |
77 | Y>C | liver [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs140107683 CA354338932 |
78 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs140107683 CA2591639 |
78 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs140107683 CA2591640 |
78 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373743584 CA2591641 |
78 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs779449130 CA2591638 |
80 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750327157 CA2591636 |
82 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs984339422 CA83290003 |
83 | I>V | No |
ClinGen Ensembl |
|
|
rs371894847 CA2591635 |
84 | E>A | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1158209949 CA354338887 |
85 | M>T | No |
ClinGen TOPMed |
|
|
CA2591634 rs757044396 |
85 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2591633 rs764323965 |
86 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs764323965 CA2591632 |
86 | R>M | No |
ClinGen ExAC gnomAD |
|
|
rs1416978003 CA354338863 |
87 | A>T | No |
ClinGen gnomAD |
|
|
CA2591619 rs781043275 |
89 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA2591618 rs781043275 |
89 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA354338849 rs1456065493 |
89 | P>T | No |
ClinGen gnomAD |
|
|
CA354338839 rs1270662412 |
91 | E>K | No |
ClinGen gnomAD |
|
|
rs993499114 CA83289062 |
93 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
CA354338821 rs1576729790 |
93 | Y>S | No |
ClinGen Ensembl |
|
|
CA83289056 rs1025805540 |
95 | C>* | No |
ClinGen TOPMed |
|
|
rs977284187 CA83289055 |
96 | Q>* | No |
ClinGen TOPMed |
|
|
CA2591616 COSM1566294 rs556450823 COSM1566293 |
97 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs1334254307 CA354338777 |
100 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs777464664 CA2591615 |
101 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777464664 CA83289028 |
101 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2591613 rs752841139 |
102 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1323915184 CA354338763 |
103 | I>L | No |
ClinGen gnomAD |
|
|
rs1323915184 CA354338762 |
103 | I>V | No |
ClinGen gnomAD |
|
|
CA354338742 rs1289912012 |
105 | H>P | No |
ClinGen TOPMed |
|
|
rs1455816581 CA354338745 |
105 | H>Y | No |
ClinGen TOPMed |
|
|
rs1386272728 CA354338733 |
106 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA354338738 rs1461406775 |
106 | M>V | No |
ClinGen gnomAD |
|
|
rs139510629 CA2591612 |
108 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1000061005 CA354338715 |
109 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1000061005 CA83289002 |
109 | N>H | No |
ClinGen TOPMed gnomAD |
|
|
CA354338710 rs1362927908 |
109 | N>K | No |
ClinGen gnomAD |
|
|
CA354338707 rs1193880771 |
110 | N>D | No |
ClinGen gnomAD |
|
|
CA354338704 rs1455263079 |
110 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA354338696 rs1576729707 |
111 | L>R | No |
ClinGen Ensembl |
|
|
CA2591611 RCV000909503 rs148075272 |
115 | V>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA354338665 rs1262473574 |
116 | A>V | No |
ClinGen TOPMed |
|
|
rs1286235647 CA354338662 |
117 | Q>* | No |
ClinGen gnomAD |
|
|
CA83288983 rs925197027 |
117 | Q>P | No |
ClinGen Ensembl |
|
|
CA2591588 rs200128917 |
119 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200128917 CA2591587 |
119 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs768125782 CA2591586 |
121 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs1576728679 CA354338619 |
121 | E>D | No |
ClinGen Ensembl |
|
|
CA354338612 CA354338611 rs1475065968 |
123 | V>L | No |
ClinGen gnomAD |
|
|
rs926229351 CA83287938 |
125 | Y>C | No |
ClinGen Ensembl |
|
|
CA2591585 rs762077369 |
126 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA83287922 rs1008757966 |
127 | G>E | No |
ClinGen TOPMed |
|
|
rs540839108 CA2591580 |
131 | V>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA354338559 rs540839108 |
131 | V>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA2591581 rs776306436 |
131 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA354338556 rs1576728638 |
132 | F>V | No |
ClinGen Ensembl |
|
|
CA354338545 rs1275247318 |
133 | S>I | No |
ClinGen gnomAD |
|
|
rs1212852273 CA354338524 |
136 | A>P | No |
ClinGen gnomAD |
|
| TCGA novel | 137 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781365158 CA2591548 CA354338494 |
138 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354338469 rs1195544433 |
142 | M>T | No |
ClinGen gnomAD |
|
|
CA354338473 rs1253730210 |
142 | M>V | No |
ClinGen gnomAD |
|
|
rs752040556 CA2591546 |
144 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA354338454 rs1560126560 |
144 | Y>D | No |
ClinGen Ensembl |
|
|
rs1217039423 CA354338446 |
145 | L>S | No |
ClinGen gnomAD |
|
|
rs778315196 CA2591545 |
146 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA354338437 rs1239000868 |
147 | K>Q | No |
ClinGen gnomAD |
|
|
CA2591542 rs765960568 |
148 | M>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 150 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 150 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 150 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2591540 rs749857275 |
153 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs767018980 CA2591539 |
153 | T>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 156 | M>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA83287441 rs761278178 |
156 | M>R | No |
ClinGen ExAC gnomAD |
|
|
rs761278178 CA2591538 |
156 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1432727397 CA354338359 |
157 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
CA2591535 rs147422431 |
159 | G>E | No |
ClinGen ESP ExAC gnomAD |
|
|
CA2591536 rs529624069 |
159 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs775450479 CA2591534 |
162 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA354338322 rs1173336697 |
163 | G>D | No |
ClinGen TOPMed |
|
|
CA354338319 rs1452654264 |
164 | L>F | No |
ClinGen gnomAD |
|
|
CA2591533 rs769868539 |
166 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA2591530 rs115378383 |
169 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs369545977 CA2591529 |
169 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs369545977 CA354338283 |
169 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1296473225 CA354338281 |
170 | S>G | No |
ClinGen TOPMed |
|
|
CA354338271 rs1576728244 |
171 | A>G | No |
ClinGen Ensembl |
|
|
CA354338274 rs1282008495 |
171 | A>T | No |
ClinGen gnomAD |
|
|
rs753007763 CA2591526 |
173 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs546955698 COSM1240612 COSM1240613 CA2591527 |
173 | R>W | oesophagus [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA2591524 rs755334697 |
175 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2591523 rs750064546 |
176 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1415154217 CA354338239 |
177 | T>N | No |
ClinGen gnomAD |
|
|
rs767132362 CA2591522 |
178 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1315012177 CA354338224 |
179 | G>E | No |
ClinGen gnomAD |
|
|
rs1438142696 CA354338216 |
180 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
rs761403676 CA2591521 |
180 | M>K | No |
ClinGen ExAC gnomAD |
|
|
rs1377961900 CA354338201 |
181 | V>F | No |
ClinGen TOPMed |
|
|
CA2591496 rs190442002 |
182 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs776306972 CA2591495 |
186 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA2591494 rs116272550 |
186 | S>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2591492 COSM1418657 COSM1418656 rs143782037 |
188 | R>Q | large_intestine Variant assessed as Somatic; 4.62e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA2591491 rs772113328 |
189 | T>A | No |
ClinGen ExAC gnomAD |
|
|
RCV000889950 rs145948028 CA2591490 |
189 | T>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA2591487 rs749606483 |
192 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1010838044 CA83287134 |
192 | E>K | No |
ClinGen gnomAD |
|
|
rs1560126231 CA354338123 |
193 | K>N | No |
ClinGen Ensembl |
|
|
CA354338126 rs1258286396 |
193 | K>R | No |
ClinGen TOPMed |
|
|
CA354338122 rs1475835221 |
194 | L>I | No |
ClinGen TOPMed |
|
|
rs780302396 CA2591486 |
194 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs200891379 CA83287119 |
198 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA2591484 rs746640310 |
199 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs777626973 CA2591483 |
201 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354338079 rs1364671937 |
201 | M>V | No |
ClinGen gnomAD |
|
|
rs778320185 CA354338051 |
203 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000889949 CA2591461 rs138206716 |
203 | G>D | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA2591462 rs778320185 |
203 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1320746067 CA354338044 |
204 | Q>R | No |
ClinGen gnomAD |
|
|
CA83285693 rs899567669 |
205 | M>I | No |
ClinGen TOPMed |
|
|
CA354338028 rs753694664 |
206 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA2591460 rs753694664 |
206 | T>K | No |
ClinGen ExAC gnomAD |
|
|
CA2591458 rs755896147 |
207 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA83285664 rs750223105 |
208 | G>R | No |
ClinGen ExAC |
|
|
CA2591457 rs750223105 |
208 | G>S | No |
ClinGen ExAC |
|
| TCGA novel | 210 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767668365 CA83285657 |
213 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1399464204 CA354337984 |
213 | I>T | No |
ClinGen gnomAD |
|
|
rs767668365 CA2591456 |
213 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354337980 rs1374705812 |
214 | G>A | No |
ClinGen gnomAD |
|
|
rs751617501 CA83285637 |
214 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1191312116 CA354337972 |
215 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA2591452 rs377594542 |
219 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1211889706 TCGA novel CA354337938 |
220 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen TOPMed gnomAD |
| TCGA novel | 220 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 222 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs372835137 CA2591451 |
222 | T>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2591450 rs770430493 |
223 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354337907 rs1259996837 |
224 | L>F | No |
ClinGen TOPMed |
|
|
CA354337896 rs762189470 |
226 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762189470 CA2591425 |
226 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354337869 rs1240137413 |
230 | A>T | No |
ClinGen gnomAD |
|
|
rs769677393 CA2591421 |
231 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2591420 rs781249685 |
231 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA2591419 rs781249685 |
231 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs769677393 CA2591422 |
231 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1224330578 CA354337861 |
232 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs574284072 CA83285417 COSM1291594 COSM1291595 |
232 | R>W | Variant assessed as Somatic; 0.0 impact. haematopoietic_and_lymphoid_tissue [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs369921888 CA2591418 |
236 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs150437149 CA2591416 |
237 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed |
|
|
CA2591414 rs150437149 RCV000892851 |
237 | E>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP |
|
|
rs558256936 CA83285383 |
238 | D>Y | No |
ClinGen Ensembl |
|
|
rs1576726568 CA354337800 |
242 | K>* | No |
ClinGen Ensembl |
|
|
TCGA novel rs1576726568 CA354337801 |
242 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Ensembl |
|
rs201324204 CA2591412 |
242 | K>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1576726560 CA354337792 |
243 | V>G | No |
ClinGen Ensembl |
|
|
CA83285369 rs1005222752 |
243 | V>I | No |
ClinGen Ensembl |
|
|
rs755161441 CA2591411 |
244 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1306512121 CA354337772 |
246 | T>I | No |
ClinGen gnomAD |
|
|
CA2591407 rs773636191 |
250 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA354337753 rs760879046 |
250 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760879046 CA2591408 |
250 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs140432607 CA2591405 |
251 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs146789283 CA2591404 |
252 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA354337740 rs1489636165 |
252 | M>T | No |
ClinGen gnomAD |
|
|
rs769281867 CA2591403 |
257 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs537407699 CA2591401 |
258 | K>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs746736077 CA354337689 |
260 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs746736077 CA2591399 |
260 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA2591398 rs777657302 |
261 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs377548715 CA2591396 |
263 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs377548715 CA2591395 |
263 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs755100274 CA354337667 |
264 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755100274 CA2591394 |
264 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1005407219 CA83285298 |
264 | G>W | No |
ClinGen TOPMed |
|
|
rs766734768 CA2591392 |
265 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1375985129 CA354337655 |
266 | I>T | No |
ClinGen TOPMed |
|
|
CA2591391 rs756666150 |
266 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs199681251 CA83285272 |
267 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs199681251 CA2591389 |
267 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA2591387 rs752343192 |
268 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA354337647 rs752343192 |
268 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs200233135 CA2591386 |
269 | I>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs758990066 CA2591385 |
270 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354337632 rs1370407124 |
271 | E>K | No |
ClinGen TOPMed |
|
|
CA2591351 rs773192320 |
273 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 278 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs373322766 CA2591349 |
280 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2591348 rs367879924 |
280 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2591347 rs367879924 |
280 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1244215238 CA354337546 |
281 | H>Q | No |
ClinGen TOPMed |
|
|
rs1256876375 CA354337549 |
281 | H>R | No |
ClinGen gnomAD |
|
|
rs993506480 CA83283926 |
282 | R>G | No |
ClinGen Ensembl |
|
|
CA2591346 rs749493762 |
282 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs769902998 CA2591344 |
284 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA354337509 rs1487553345 |
287 | M>I | No |
ClinGen TOPMed |
|
|
CA354337515 rs1285857009 |
287 | M>L | No |
ClinGen TOPMed |
|
|
CA354337475 rs1422833934 |
292 | S>N | No |
ClinGen gnomAD |
|
|
rs372290750 CA2591339 COSM1037768 COSM1593292 |
295 | R>C | endometrium [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA2591338 rs139894266 |
295 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA354337452 rs139894266 |
295 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1456431938 CA354337450 |
296 | C>R | No |
ClinGen gnomAD |
|
|
rs1456431938 CA354337451 |
296 | C>S | No |
ClinGen gnomAD |
|
|
CA83283875 rs991763719 |
298 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA354337427 rs1237487920 |
299 | R>K | No |
ClinGen gnomAD |
|
| TCGA novel | 299 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1576725089 CA354337414 |
301 | R>K | No |
ClinGen Ensembl |
|
|
rs760915107 CA2591264 |
302 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA354337024 rs1449930737 |
302 | E>V | No |
ClinGen TOPMed |
|
|
CA2591263 rs770264011 |
303 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs558833391 CA2591262 |
305 | K>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs549226578 CA2591260 |
305 | K>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs549226578 CA2591261 |
305 | K>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA354337004 rs1286543358 |
306 | K>E | No |
ClinGen TOPMed |
|
| rs754361807 | 307 | K>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA83279886 rs569784894 |
307 | K>R | No |
ClinGen Ensembl |
|
| TCGA novel | 308 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs763352174 CA2591257 |
309 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2591256 rs776029294 |
310 | L>F | No |
ClinGen ExAC |
|
|
CA83276940 rs35062810 VAR_034001 |
311 | S>T | No |
ClinGen UniProt Ensembl dbSNP |
|
|
rs770324286 CA2591255 |
312 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs770324286 CA354336965 |
312 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs941402672 CA354336960 |
313 | G>R | No |
ClinGen TOPMed |
|
|
rs941402672 CA83276930 |
313 | G>S | No |
ClinGen TOPMed |
|
|
rs570775584 CA83276929 |
314 | Y>* | No |
ClinGen Ensembl |
|
|
CA354336941 rs1278517704 |
315 | H>Q | No |
ClinGen TOPMed |
|
| TCGA novel | 316 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1212646798 CA354336934 |
317 | N>H | No |
ClinGen TOPMed |
|
|
rs372980229 CA2591252 |
317 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2591251 rs369354035 |
318 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA354336908 rs1224212283 |
321 | L>F | No |
ClinGen gnomAD |
|
|
CA83276556 rs1047282243 |
323 | E>D | No |
ClinGen TOPMed |
|
|
CA83276560 rs941614424 |
323 | E>K | No |
ClinGen Ensembl |
|
|
rs768191810 CA2591224 |
324 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780022603 CA2591222 |
325 | L>M | No |
ClinGen ExAC gnomAD |
|
|
rs781212470 CA354336856 |
328 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781212470 COSM1143134 COSM581192 CA2591219 |
328 | E>K | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA354336844 rs1386209319 |
329 | L>F | No |
ClinGen TOPMed |
|
|
rs142914763 CA2591217 |
331 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1453146864 CA354336835 |
331 | T>P | No |
ClinGen gnomAD |
|
|
rs148567215 CA2591215 |
332 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 333 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759765427 CA2591212 |
334 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1185508692 CA354336777 |
340 | G>R | No |
ClinGen gnomAD |
|
|
CA354336770 rs1576721898 |
341 | S>A | No |
ClinGen Ensembl |
|
|
rs1163641715 CA354336756 |
343 | Q>* | No |
ClinGen gnomAD |
|
|
rs761492132 CA2591208 |
343 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs372747256 CA2591207 |
344 | T>I | No |
ClinGen ESP ExAC gnomAD |
|
|
CA2591206 rs768138785 |
345 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775338652 CA2591204 |
346 | C>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 347 | H>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA354336732 rs1320360409 |
347 | H>Y | No |
ClinGen gnomAD |
|
|
rs1293714150 CA354336725 |
348 | N>D | No |
ClinGen gnomAD |
|
|
rs368704208 CA2591203 |
349 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781009916 CA2591201 |
350 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770681158 CA2591200 |
351 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA354336702 rs1332218559 |
351 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
COSM73212 rs778206383 CA2591199 |
353 | G>S | ovary Variant assessed as Somatic; 0.0001386 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA2591197 rs752834452 |
357 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354336662 rs752834452 |
357 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1185040165 CA354336660 |
358 | Q>K | No |
ClinGen TOPMed |
|
|
CA354336658 rs779509709 |
358 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA2591196 rs779509709 |
358 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1211857311 CA354336654 |
359 | L>F | No |
ClinGen gnomAD |
|
|
rs149908649 CA2591195 |
362 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs766747342 CA2591193 |
363 | E>* | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 363 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2591192 rs761006188 |
364 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA2591191 rs751211752 |
365 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1250455777 CA354336612 |
365 | Q>R | No |
ClinGen gnomAD |
|
|
CA83276314 rs957520583 |
366 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA2591189 rs370883996 |
368 | M>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2591190 rs370883996 |
368 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1231484702 CA354336566 |
372 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA2591186 rs201344106 |
373 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs750520612 CA83276298 |
374 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA2591185 rs776489085 |
375 | F>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 376 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs770753240 CA2591184 |
379 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA354336524 rs1394563001 |
379 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1458175586 CA354336513 |
380 | Q>H | No |
ClinGen gnomAD |
|
|
rs867895079 CA83276278 |
382 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1219446945 CA354336486 |
382 | S>R | No |
ClinGen gnomAD |
|
| TCGA novel | 383 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA83275805 rs200612701 |
384 | R>S | No |
ClinGen 1000Genomes |
|
|
CA2591163 rs774875224 |
384 | R>T | No |
ClinGen ExAC TOPMed |
|
|
rs772028951 CA2591159 |
386 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs772028951 CA83275781 |
386 | Q>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 389 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1281654748 CA354336426 |
392 | R>K | No |
ClinGen gnomAD |
|
|
CA354336423 rs1404060498 |
392 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA354336420 rs1576721181 |
393 | L>V | No |
ClinGen Ensembl |
|
|
CA2591156 rs768779703 |
395 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA2591157 rs547424830 |
395 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1401864888 CA354336394 |
397 | K>* | No |
ClinGen gnomAD |
|
|
rs1030602121 CA83275730 |
399 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1247125132 CA354336377 |
399 | F>L | No |
ClinGen TOPMed |
|
|
rs780554161 CA2591152 |
402 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA354336341 rs147353570 |
403 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM1037765 CA354336337 rs1195858314 COSM1593294 |
404 | G>D | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs746191901 CA2591150 |
404 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA2591149 rs374349021 |
405 | N>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1261696861 CA354336327 |
406 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs757676146 CA2591148 |
407 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA354336298 rs1223141027 |
410 | E>A | No |
ClinGen gnomAD |
|
|
rs1318951815 CA354336295 |
410 | E>D | No |
ClinGen gnomAD |
|
|
rs1004164987 CA83275704 |
411 | A>G | No |
ClinGen Ensembl |
|
|
CA354336293 rs1392945547 |
411 | A>S | No |
ClinGen TOPMed |
|
|
CA2591144 rs753307265 |
412 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766295863 CA2591143 |
412 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2591142 rs142723755 |
414 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA354336257 rs1172740244 |
415 | G>E | No |
ClinGen TOPMed |
|
|
rs773336510 CA2591141 |
415 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 416 | A>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2591115 rs138921339 |
416 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA354336248 rs1426991973 |
417 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA354336249 rs1426991973 |
417 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA83275020 rs1033551905 |
418 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs757679109 CA2591113 |
420 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1420322198 CA354336219 |
421 | K>* | No |
ClinGen gnomAD |
|
|
rs1420322198 CA354336220 |
421 | K>E | No |
ClinGen gnomAD |
|
|
rs147228765 CA2591111 |
422 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA354336212 rs1296936864 |
422 | G>R | No |
ClinGen TOPMed |
|
| TCGA novel | 422 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747355111 CA2591110 |
423 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1175621463 CA354336204 |
423 | A>V | No |
ClinGen gnomAD |
|
|
CA2591109 rs567363832 |
424 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs772531060 CA2591108 |
425 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 425 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1235955966 TCGA novel CA354336190 |
426 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs779922986 CA2591106 |
426 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs1235955966 CA354336192 |
426 | T>S | No |
ClinGen TOPMed |
|
|
CA2591104 rs749968425 |
427 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757174717 CA2591102 |
428 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA354336179 rs1576720437 |
428 | F>V | No |
ClinGen Ensembl |
|
|
CA2591100 RCV000975008 VAR_042732 rs9871671 |
429 | R>C | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA354336172 rs9871671 |
429 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2591099 RCV000419129 rs201724997 |
429 | R>H | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs1284839633 CA354336166 |
430 | Y>C | No |
ClinGen gnomAD |
|
|
CA354336165 rs1284839633 |
430 | Y>S | No |
ClinGen gnomAD |
|
|
CA354336160 rs1407097136 |
431 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1407097136 CA354336161 |
431 | P>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs765456633 CA2591097 |
433 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765456633 CA2591098 |
433 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs148040497 CA2591096 |
434 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA354336138 rs1347523511 |
435 | Q>* | No |
ClinGen gnomAD |
|
|
rs369243226 CA354336134 |
435 | Q>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369243226 CA2591095 |
435 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377507830 CA2591094 |
436 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs773824072 CA2591092 |
439 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA83274025 rs112110157 |
440 | D>G | No |
ClinGen Ensembl |
|
|
rs1298986279 CA354336090 |
440 | D>H | No |
ClinGen gnomAD |
|
| TCGA novel | 441 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1463279863 CA354336084 |
441 | I>V | No |
ClinGen gnomAD |
|
|
COSM1231900 CA354336071 COSM1231899 CA354336072 rs1352547421 |
442 | F>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA2591064 rs758391330 |
443 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1445155004 CA354336060 |
444 | Q>L | No |
ClinGen TOPMed gnomAD |
|
|
CA354336061 rs1445155004 |
444 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA83274011 rs868528337 |
445 | G>R | No |
ClinGen Ensembl |
|
|
CA83273997 rs748121358 |
448 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2591063 rs748121358 |
448 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2591062 COSM1471585 COSM1471586 rs200384323 |
450 | R>H | prostate [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs200384323 CA354336023 |
450 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2591061 rs754051123 |
451 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA354336014 rs1560120599 |
452 | V>M | No |
ClinGen Ensembl |
|
|
rs756093885 CA2591058 |
454 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354335992 rs1376449720 |
455 | S>L | No |
ClinGen TOPMed |
|
|
rs767874554 CA2591056 |
456 | G>E | No |
ClinGen ExAC |
|
|
CA354335982 rs1576719295 |
457 | D>A | No |
ClinGen Ensembl |
|
|
CA2591055 rs762380311 |
457 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775049475 CA354335976 |
458 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs775049475 CA2591054 |
458 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA354335961 rs1560120477 |
460 | D>A | No |
ClinGen Ensembl |
|
|
CA354335960 rs1560120477 |
460 | D>G | No |
ClinGen Ensembl |
|
|
CA2591051 rs763479378 |
462 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354335945 rs1180101022 |
463 | V>D | No |
ClinGen TOPMed |
|
|
rs746460687 CA2591048 |
463 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746460687 CA2591049 |
463 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 463 | V>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs371652976 CA2591046 |
465 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2591045 rs748062132 |
466 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA83273896 rs748062132 |
466 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778885525 CA2591044 |
468 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778885525 CA354335914 |
468 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354335909 rs1423389103 |
469 | T>I | No |
ClinGen gnomAD |
|
|
rs1249436745 CA354335898 |
471 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA2591042 rs749099363 |
471 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA354335892 rs1490622200 |
472 | L>R | No |
ClinGen gnomAD |
|
|
rs1560120387 CA354335887 |
473 | E>G | No |
ClinGen Ensembl |
|
|
rs780092716 CA2591041 |
474 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2591040 rs141251835 |
475 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs879460672 CA83273843 |
475 | A>V | No |
ClinGen Ensembl |
|
|
CA2591039 rs750652507 |
476 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2591018 rs757340861 |
480 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA83273829 rs201153684 |
480 | V>L | No |
ClinGen Ensembl |
|
|
CA2591016 rs62264732 |
483 | S>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs758940505 CA2591015 |
484 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs750847739 CA83272383 |
484 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs540495239 CA2591013 |
489 | M>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA83272358 rs1038151162 |
489 | M>R | No |
ClinGen TOPMed |
|
|
rs1038151162 CA83272360 |
489 | M>T | No |
ClinGen TOPMed |
|
|
CA354335776 rs1445549528 |
489 | M>V | No |
ClinGen TOPMed |
|
|
rs767173592 CA354335759 |
490 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA2591011 rs750021735 |
490 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs759882583 CA354335767 |
490 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2591009 rs377549414 |
491 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA354335732 rs1315109077 |
492 | I>T | No |
ClinGen gnomAD |
|
|
rs199880733 CA2591007 |
493 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs762927115 CA2591006 |
493 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354335722 rs762927115 |
493 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199880733 CA354335726 |
493 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1335697760 CA354335710 |
494 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
CA354335688 rs1397656498 |
495 | I>M | No |
ClinGen gnomAD |
|
|
CA354335691 rs1414202773 |
495 | I>N | No |
ClinGen gnomAD |
|
|
CA2591005 rs762174555 |
496 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA2591003 rs75603988 RCV000961473 |
496 | R>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA2591004 rs762174555 |
496 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA2591002 rs140532409 |
497 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA354335660 rs1446548997 |
498 | A>T | No |
ClinGen gnomAD |
|
|
CA2591000 rs374552890 |
498 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs748680790 CA2590998 |
499 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748680790 CA2590997 |
499 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779289561 CA2590996 |
499 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371374043 CA2590994 |
500 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1292449123 CA354335633 |
500 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs142539456 CA2590992 |
502 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2590993 rs767118596 |
502 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354335280 rs1374035354 |
505 | V>G | No |
ClinGen TOPMed |
|
| TCGA novel | 506 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA354335258 rs1489832281 |
509 | A>T | No |
ClinGen gnomAD |
|
|
CA2590968 rs776766225 |
511 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs369284359 CA83270390 |
515 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1439443573 CA354335209 |
516 | Q>H | No |
ClinGen TOPMed |
|
|
rs760546560 CA2590966 |
516 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA354335197 rs1244390072 |
518 | G>S | No |
ClinGen Ensembl |
|
|
CA354335194 rs1227394993 |
518 | G>V | No |
ClinGen gnomAD |
|
|
CA2590965 rs201269614 |
519 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs772203712 CA2590964 |
519 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1274798019 CA354335187 |
520 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs374247096 CA354335189 |
520 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2590963 rs374247096 COSM203479 |
520 | V>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 521 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774267003 CA2590962 |
521 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1028662513 CA83270370 |
522 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA2590960 rs202042371 |
523 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs202042371 CA354335173 |
523 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs202042371 CA2590961 |
523 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 525 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA83270339 rs1050582350 |
529 | A>T | No |
ClinGen Ensembl |
|
|
rs1456898130 CA354335130 |
529 | A>V | No |
ClinGen gnomAD |
|
|
rs746246948 CA354335124 |
530 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2590958 rs369572477 |
530 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA354335128 rs1178283300 |
530 | I>V | No |
ClinGen gnomAD |
|
|
CA354335122 rs35516512 |
531 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
RCV000967832 rs35516512 CA2590956 |
531 | A>T | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
COSM1593297 rs1308061173 CA354335115 COSM1037761 |
532 | C>Y | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1174624941 CA354335108 |
533 | R>K | No |
ClinGen TOPMed |
|
|
CA354335099 rs1239849017 |
534 | R>M | No |
ClinGen gnomAD |
|
| TCGA novel | 536 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs371222476 CA2590933 |
537 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1744703 rs376841069 COSM1744702 CA2590932 |
538 | P>L | biliary_tract [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA2590930 rs767207719 |
539 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs574614157 CA354334672 |
540 | V>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs574614157 CA2590929 |
540 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA2590928 rs751667164 |
542 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354334658 rs1199524666 |
542 | S>R | No |
ClinGen TOPMed |
|
|
CA2590927 rs764391418 |
543 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs762973643 CA2590926 |
543 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA2590925 rs775579924 |
544 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs769909802 CA2590924 |
545 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA2590923 rs760021919 |
546 | H>N | No |
ClinGen ExAC gnomAD |
|
|
CA354334638 rs760021919 |
546 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA2590922 rs199637482 |
547 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs773821871 CA2590920 |
548 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773821871 CA2590919 |
548 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2590918 rs368108422 |
549 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373958192 CA83268718 |
550 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA gnomAD |
|
rs755746087 COSM169291 CA2590915 |
552 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA354334602 rs755746087 |
552 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354334593 rs1560116392 |
553 | S>N | No |
ClinGen Ensembl |
|
|
rs1367426983 CA354334596 |
553 | S>R | No |
ClinGen gnomAD |
|
|
rs781194422 CA2590914 |
554 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs781194422 CA2590913 |
554 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs756944014 CA2590912 |
558 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354334552 rs1363966368 |
559 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA2590910 rs764263682 |
561 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs372570937 COSM1418649 COSM1418648 CA2590908 |
563 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA2590906 rs144114875 |
564 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1208090936 CA354334489 |
568 | C>F | No |
ClinGen TOPMed gnomAD |
|
|
CA354334491 rs1208090936 |
568 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs372699269 CA83268685 |
569 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs372699269 CA2590905 |
569 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs766927498 CA2590904 |
570 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs753979366 CA2590888 |
571 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354334245 rs1363952843 |
572 | A>T | No |
ClinGen gnomAD |
|
|
CA2590887 rs766406934 |
573 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354334227 rs766406934 |
573 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1576710954 CA354334210 |
574 | Q>R | No |
ClinGen Ensembl |
|
| TCGA novel | 576 | F>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1171247652 CA354334179 |
577 | V>A | No |
ClinGen gnomAD |
|
|
rs773916999 CA83268185 |
577 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2590885 rs773916999 |
577 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs202155267 CA83268182 |
579 | D>N | No |
ClinGen 1000Genomes |
|
|
CA354334160 rs1465957358 |
580 | A>D | No |
ClinGen gnomAD |
|
|
CA2590883 rs762276275 |
581 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA2590882 rs199874583 COSM172790 |
582 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs758929808 CA2590881 COSM1471587 COSM1471588 |
582 | R>H | Variant assessed as Somatic; 0.0 impact. prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs758929808 CA2590880 |
582 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354334146 rs369953230 |
583 | G>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369953230 CA2590878 |
583 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA354334138 rs537635131 |
584 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA2590877 rs537635131 |
584 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 586 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777691085 CA2590876 |
586 | W>S | No |
ClinGen ExAC gnomAD |
|
|
rs771796599 CA2590875 |
587 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA2590874 rs747955739 |
588 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354334114 rs1340852796 |
588 | A>V | No |
ClinGen gnomAD |
|
|
CA2590873 rs779063574 |
589 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1282855827 CA354334110 |
589 | L>P | No |
ClinGen TOPMed |
|
| TCGA novel | 590 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs754054129 CA2590871 |
592 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs150770424 CA2590869 |
595 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA354333616 rs1179806604 |
598 | G>C | No |
ClinGen gnomAD |
|
|
CA354333614 rs1008268643 |
598 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1008268643 CA83259794 |
598 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs757809401 CA2590849 |
599 | E>K | No |
ClinGen ExAC gnomAD |
|
|
COSM3673830 rs763877001 CA83259776 COSM3673829 |
600 | V>A | Variant assessed as Somatic; 0.0 impact. prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA2590847 rs763877001 |
600 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752162144 CA2590848 |
600 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA354333557 rs138856930 |
602 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA354333563 rs1205348607 |
602 | N>S | No |
ClinGen gnomAD |
|
|
rs145069129 CA2590845 COSM249707 COSM4149624 |
603 | G>R | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs145069129 CA83259762 |
603 | G>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs760134412 COSM1143127 CA2590844 COSM581199 |
604 | G>A | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs760134412 CA83259755 |
604 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760134412 CA2590843 |
604 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1275979460 CA354333538 |
605 | F>I | No |
ClinGen gnomAD |
|
|
CA354333521 rs560289494 |
606 | G>C | No |
ClinGen gnomAD |
|
|
CA354333519 rs1323047372 |
606 | G>D | No |
ClinGen gnomAD |
|
|
CA83259744 rs560289494 |
606 | G>S | No |
ClinGen gnomAD |
|
|
rs372369120 CA83259731 |
608 | V>E | No |
ClinGen ESP |
|
|
CA2590839 rs375611196 |
608 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs545914298 CA354333470 |
610 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs138713416 CA2590837 |
610 | D>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs770171269 CA2590835 |
611 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs540556859 CA2590833 |
613 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs540556859 CA2590834 |
613 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1207156496 CA354333416 |
615 | A>S | No |
ClinGen gnomAD |
|
|
rs747452050 CA2590832 |
616 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778154563 CA2590831 |
617 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA354333366 rs560314285 |
619 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1156364496 CA354333372 |
619 | A>P | No |
ClinGen gnomAD |
|
|
rs560314285 CA2590830 |
619 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA2590829 rs753035060 |
620 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs765670557 CA2590828 |
621 | L>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 623 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs938044903 CA83259662 |
624 | S>N | No |
ClinGen TOPMed |
|
|
CA2590827 rs755738291 |
625 | W>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354333285 rs1412657820 |
626 | D>N | No |
ClinGen gnomAD |
|
|
rs1424414239 CA354333246 |
628 | S>F | No |
ClinGen gnomAD |
|
|
rs368628878 CA354333233 |
629 | N>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368628878 CA2590826 |
629 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1411566085 CA354333173 |
631 | V>M | No |
ClinGen gnomAD |
|
|
rs759415563 CA2590798 |
632 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354333163 rs1191072795 |
632 | A>V | No |
ClinGen TOPMed |
|
|
rs374958655 CA2590796 |
633 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2590797 rs776940528 |
633 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs576157581 CA2590794 |
634 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs954004056 CA83259172 |
634 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA354333130 rs748597968 |
638 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2590792 rs748597968 |
638 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2590793 rs772251249 |
638 | G>W | No |
ClinGen ExAC |
|
|
rs554807354 CA83259161 |
639 | N>D | No |
ClinGen TOPMed |
|
|
CA83259157 rs138228816 |
641 | K>Q | No |
ClinGen ESP |
|
|
CA2590789 rs143795787 |
642 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA354333096 rs1204454639 |
643 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
rs149008130 CA2590788 RCV000898691 |
643 | Y>C | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA354333092 rs1488851821 |
644 | E>* | No |
ClinGen gnomAD |
|
|
rs1164121373 CA354333091 |
644 | E>A | No |
ClinGen gnomAD |
|
|
CA354333073 rs1215281266 |
646 | I>M | No |
ClinGen TOPMed |
|
|
CA2590784 rs757996376 |
650 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA354333046 rs1320500921 |
650 | M>R | No |
ClinGen TOPMed |
|
|
rs777138050 CA2590785 |
650 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs752516208 CA2590783 |
651 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1386778336 CA354332997 |
657 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA354332999 rs1386778336 |
657 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs753650561 CA83259062 |
662 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA2590779 rs766325826 |
663 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1034983768 CA83259042 |
664 | V>A | No |
ClinGen TOPMed |
|
|
rs771977054 CA2590778 CA2590777 |
664 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs771977054 CA2590776 |
664 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA2590774 rs774792576 |
665 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs761968488 CA2590775 |
665 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA354332888 rs199712731 |
666 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1181715821 CA354332901 |
666 | D>N | No |
ClinGen gnomAD |
|
|
rs202033813 CA2590771 |
667 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs202033813 CA2590772 |
667 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs530723506 CA83259020 |
668 | R>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs530723506 CA2590769 |
668 | R>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA354332867 rs530723506 |
668 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA2590770 rs550425741 |
668 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA2590768 rs765992522 |
670 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA83259009 rs905411539 |
672 | Q>H | No |
ClinGen Ensembl |
|
|
rs757795630 CA2590767 |
676 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
1 associated diseases with Q96N76
[MIM: 276880]: Urocanase deficiency (UROCD)
An inborn error of histidine metabolism resulting in urocanic aciduria and neurological manifestations including intellectual disability, ataxia, episodic aggressive behavior or exaggerated affection-seeking. {ECO:0000269|PubMed:19304569}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- An inborn error of histidine metabolism resulting in urocanic aciduria and neurological manifestations including intellectual disability, ataxia, episodic aggressive behavior or exaggerated affection-seeking. {ECO:0000269|PubMed:19304569}. Note=The disease is caused by variants affecting the gene represented in this entry.
4 regional properties for Q96N76
Functions
| Description | ||
|---|---|---|
| EC Number | 4.2.1.49 | Hydro-lyases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| urocanate hydratase activity | Catalysis of the reaction: 4-imidazolone-5-propanoate + H(+) = trans-urocanate + H(2)O. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| histidine catabolic process | The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid. |
| histidine catabolic process to glutamate and formamide | The chemical reactions and pathways resulting in the breakdown of histidine into other compounds, including glutamate and formamide. |
| histidine catabolic process to glutamate and formate | The chemical reactions and pathways resulting in the breakdown of histidine into other compounds, including glutamate and formate. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q8VC12 | Uroc1 | Urocanate hydratase | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSSLQALCSG | LPLRPLPENR | GRQAGVPHAP | VRTPSLSPVE | KQLALRNALR | YFPPDVQELL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| APEFAQELQL | YGHIYMYRFC | PDIEMRAYPI | EQYPCQTKVA | AAIMHMIMNN | LDPAVAQFPQ |
| 130 | 140 | 150 | 160 | 170 | 180 |
| ELVTYGGNGQ | VFSNWAQFWL | TMFYLSKMTE | EQTLVMYSGH | PLGLFPSSRS | APRLVITNGM |
| 190 | 200 | 210 | 220 | 230 | 240 |
| VIPNYSSRTE | YEKLFALGVT | MYGQMTAGSY | CYIGPQGIVH | GTVLTVLNAA | RRYLGIEDLA |
| 250 | 260 | 270 | 280 | 290 | 300 |
| GKVFVTSGLG | GMSGAQAKAA | VIVGCIGVIA | EVDKAALEKR | HRQGWLMEVT | DSLDRCIQRL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| REARKKKEVL | SLGYHGNVVA | LWERLVHELD | TTGECLVDLG | SDQTSCHNPF | NGGYYPVQLS |
| 370 | 380 | 390 | 400 | 410 | 420 |
| FTEAQSLMAS | NPAVFKDLVQ | ESLRRQVSAI | NRLAEEKFFF | WDYGNAFLLE | AQRAGADVEK |
| 430 | 440 | 450 | 460 | 470 | 480 |
| KGAGRTEFRY | PSYVQHIMGD | IFSQGFGPFR | WVCTSGDPQD | LAVTDELATS | VLEEAIADGV |
| 490 | 500 | 510 | 520 | 530 | 540 |
| KVSVKLQYMD | NIRWIREAAR | HRLVVGSQAR | ILYSDQKGRV | AIAVAINQAI | ACRRIKAPVV |
| 550 | 560 | 570 | 580 | 590 | 600 |
| LSRDHHDVSG | TDSPFRETSN | IYDGSAFCAD | MAVQNFVGDA | CRGATWVALH | NGGGVGWGEV |
| 610 | 620 | 630 | 640 | 650 | 660 |
| INGGFGLVLD | GTPEAEGRAR | LMLSWDVSNG | VARRCWSGNQ | KAYEIICQTM | QENSTLVVTL |
| 670 | |||||
| PHKVEDERVL | QQALQL |