Q8WUQ7
Gene name |
CACTIN (C19orf29) |
Protein name |
Cactin |
Names |
Renal carcinoma antigen NY-REN-24 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:58509 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
5 structures for Q8WUQ7
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 6QDV | EM | 330 A | F | 637-758 | PDB |
| 7W5A | EM | 360 A | Z | 1-758 | PDB |
| 7W5B | EM | 430 A | Z | 1-758 | PDB |
| 8C6J | EM | 280 A | F | 1-758 | PDB |
| AF-Q8WUQ7-F1 | Predicted | AlphaFoldDB |
631 variants for Q8WUQ7
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA9081810 rs762547747 |
2 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs868759611 CA304383403 |
2 | G>C | No |
ClinGen Ensembl |
|
|
rs868054668 CA304383397 |
3 | R>L | No |
ClinGen gnomAD |
|
|
rs868054668 CA403363290 |
3 | R>P | No |
ClinGen gnomAD |
|
|
CA304383399 rs897626615 |
3 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs769508468 CA9081808 |
4 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403363271 rs775674838 |
5 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762520508 CA304383392 |
5 | T>R | No |
ClinGen TOPMed gnomAD |
|
|
CA9081806 rs775674838 |
5 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403363263 rs1263854517 |
6 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1207923714 CA403363259 |
6 | R>P | No |
ClinGen gnomAD |
|
|
CA403363265 rs1263854517 |
6 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA403363247 rs1488044735 |
7 | S>W | No |
ClinGen gnomAD |
|
|
CA403363240 rs1265763751 |
8 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA403363243 rs1265763751 |
8 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1339685936 CA403363227 |
9 | S>W | No |
ClinGen gnomAD |
|
|
CA403363219 rs1439805978 |
10 | R>P | No |
ClinGen TOPMed |
|
|
CA403363220 rs1439805978 |
10 | R>Q | No |
ClinGen TOPMed |
|
|
rs746280342 CA9081804 |
10 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
rs1186167329 CA403363209 |
11 | S>F | No |
ClinGen TOPMed |
|
|
rs1228576032 CA403363194 |
12 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA403363187 rs1299822890 |
13 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1299822890 CA403363190 |
13 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA9081799 rs756290746 |
14 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081798 rs752931515 |
14 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1310753565 CA403363174 |
15 | R>G | No |
ClinGen TOPMed |
|
|
rs1310753565 CA403363173 |
15 | R>W | No |
ClinGen TOPMed |
|
|
CA403363161 rs1355196815 |
16 | G>D | No |
ClinGen TOPMed |
|
|
rs1044722321 CA403363148 |
17 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1044722321 CA304383378 |
17 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA9081797 rs781316893 |
18 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA403363118 rs1169465863 |
20 | Q>R | No |
ClinGen gnomAD |
|
|
rs1347293258 CA403363110 |
21 | S>G | No |
ClinGen TOPMed |
|
|
CA403363085 rs1431714177 |
22 | Q>H | No |
ClinGen gnomAD |
|
|
CA403363080 rs1208976357 |
23 | S>N | No |
ClinGen TOPMed |
|
|
CA403363074 rs1375944398 |
24 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs751376573 CA9081796 |
26 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751376573 CA9081795 |
26 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403363039 rs1252419804 |
27 | S>G | No |
ClinGen TOPMed |
|
|
rs1267936287 CA403363017 |
29 | S>R | No |
ClinGen gnomAD |
|
|
CA9081793 rs749900957 |
29 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1273553334 CA403362968 |
32 | H>L | No |
ClinGen gnomAD |
|
|
rs1455229675 CA403362952 |
34 | R>Q | No |
ClinGen TOPMed |
|
|
CA9081791 rs764867647 |
35 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA403362934 rs1253693561 |
36 | N>D | No |
ClinGen gnomAD |
|
|
CA403362936 rs1253693561 |
36 | N>H | No |
ClinGen gnomAD |
|
|
CA403362920 rs1233194491 |
36 | N>K | No |
ClinGen gnomAD |
|
|
rs761461179 CA9081790 |
40 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1408443543 CA403362878 |
41 | E>A | No |
ClinGen gnomAD |
|
|
CA403362884 rs1304018789 |
41 | E>K | No |
ClinGen gnomAD |
|
|
rs1308716085 CA403362864 |
42 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA403362852 rs1430021999 |
43 | E>K | No |
ClinGen TOPMed |
|
|
CA403362833 rs1300198477 |
44 | G>R | No |
ClinGen TOPMed |
|
|
rs1350188878 CA403362813 |
45 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA403362802 rs1308885681 |
45 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1411849576 CA403362739 |
48 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA403362741 rs1411849576 |
48 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA9081789 rs772584947 |
50 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768264812 CA9081788 |
51 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA403362667 rs1313931218 |
52 | S>I | No |
ClinGen TOPMed gnomAD |
|
|
rs759881630 CA9081787 |
54 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA304383356 rs1047338956 |
56 | R>K | No |
ClinGen TOPMed |
|
|
CA9081761 rs747224468 |
57 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1388241237 CA403360276 |
61 | E>K | No |
ClinGen gnomAD |
|
|
CA403360245 rs1162309914 |
62 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA9081759 rs117491710 |
63 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM995215 rs780460957 CA9081760 |
63 | R>W | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1448334853 CA403360209 |
64 | W>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs745727694 CA9081758 |
65 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs778932025 CA9081757 |
66 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081756 rs568677025 |
66 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9081755 rs753340469 |
67 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs763544048 CA9081754 |
68 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403360123 rs1210693903 |
68 | G>R | No |
ClinGen gnomAD |
|
|
CA9081753 rs755692018 |
69 | M>T | No |
ClinGen ExAC |
|
|
rs1295643587 CA403360043 |
70 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs752325115 CA9081752 |
70 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs767214264 CA9081751 |
71 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs773571101 CA9081749 |
72 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763298025 CA9081750 |
72 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA9081748 rs765717577 |
73 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA304380270 rs763724454 |
74 | P>L | No |
ClinGen Ensembl |
|
|
CA9081745 rs188275020 |
75 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| rs761795759 | 76 | R>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9081740 rs201504880 |
76 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs747158900 CA9081741 |
76 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs183659721 CA9081739 |
78 | K>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1246604224 CA403359823 |
79 | W>G | No |
ClinGen gnomAD |
|
|
rs1268454373 CA403359718 |
83 | D>G | No |
ClinGen TOPMed |
|
|
CA403359673 rs1200078790 |
84 | G>E | No |
ClinGen gnomAD |
|
|
rs1272833903 CA403359608 |
86 | S>F | No |
ClinGen gnomAD |
|
|
CA9081737 rs778874723 |
86 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA9081736 rs770861559 |
88 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403359585 rs1204615081 |
88 | S>T | No |
ClinGen gnomAD |
|
|
CA304380247 rs552324776 |
89 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 89 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9081733 rs755564282 |
91 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1274168626 CA403359454 |
92 | E>K | No |
ClinGen gnomAD |
|
|
CA403359401 rs1305814027 |
94 | Q>* | No |
ClinGen gnomAD |
|
|
CA304380235 rs570125841 |
94 | Q>H | No |
ClinGen Ensembl |
|
|
rs538539255 CA9081731 |
96 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA403359370 rs1244603265 |
96 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA9081730 rs754638301 |
98 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs1171953253 CA403359323 |
98 | Q>R | No |
ClinGen gnomAD |
|
|
CA403359295 rs1177776551 |
99 | W>C | No |
ClinGen gnomAD |
|
|
CA9081729 rs750733184 |
99 | W>R | No |
ClinGen ExAC gnomAD |
|
|
rs765548103 CA9081728 |
100 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403359289 rs1568297187 |
100 | A>T | No |
ClinGen Ensembl |
|
|
rs765548103 CA403359282 |
100 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1041912810 CA304380220 |
101 | R>C | No |
ClinGen gnomAD |
|
|
CA9081727 rs762274783 |
101 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403359254 rs764731895 |
102 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764731895 CA9081725 |
102 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM178739 CA9081726 rs754275047 |
102 | R>W | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA9081724 rs760773303 |
103 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA403359221 rs772375805 |
104 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081722 rs772375805 |
104 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081723 rs775728869 |
104 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs759869661 CA9081721 |
105 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200387014 CA9081720 |
105 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA403359160 rs374661733 |
106 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM3707066 CA9081718 rs374661733 |
106 | A>T | Variant assessed as Somatic; 0.0 impact. liver [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs777564935 CA9081717 |
107 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA9081716 rs769773969 |
107 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs777564935 CA403359142 |
107 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs55862054 CA403359110 |
108 | S>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9081714 rs55862054 |
108 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA403359106 rs55862054 |
108 | S>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9081712 rs751177420 |
112 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA403358958 rs1410523445 |
113 | S>F | No |
ClinGen gnomAD |
|
|
CA9081711 rs779802743 |
114 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs1048684291 CA304380179 |
115 | A>G | No |
ClinGen TOPMed |
|
|
CA403358918 rs1238078392 |
115 | A>T | No |
ClinGen gnomAD |
|
|
CA403358909 rs1048684291 |
115 | A>V | No |
ClinGen TOPMed |
|
|
CA304380175 rs1060571 |
117 | S>R | No |
ClinGen Ensembl |
|
|
CA403358834 rs1191669044 |
118 | S>C | No |
ClinGen gnomAD |
|
|
CA9081706 rs752789238 |
119 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081708 rs764453544 |
119 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752789238 CA9081707 |
119 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403358762 rs1226199053 |
121 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1308697344 CA403358765 |
121 | P>S | No |
ClinGen gnomAD |
|
|
CA9081703 rs774424818 |
122 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs774424818 CA403358736 |
122 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA403358732 rs1354624691 |
123 | R>* | No |
ClinGen gnomAD |
|
|
rs771249787 CA403358729 |
123 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771249787 CA9081702 |
123 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA403358694 rs1460400232 |
125 | Q>H | No |
ClinGen Ensembl |
|
|
CA9081701 rs762587656 |
126 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA9081700 rs773071711 |
126 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs374039423 CA9081697 |
128 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 128 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9081695 rs144125650 |
128 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs144125650 CA9081694 |
128 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs144125650 CA9081693 |
128 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs374039423 CA9081696 |
128 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA403358626 rs201370100 |
129 | A>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9081692 rs201370100 |
129 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9081690 rs201335748 |
130 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9081688 rs201717662 |
131 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1258429728 CA403358596 |
132 | A>T | No |
ClinGen TOPMed |
|
|
CA403358484 rs1331844932 |
137 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA403358474 rs1568297014 |
138 | Q>* | No |
ClinGen Ensembl |
|
|
CA9081686 rs751660854 |
138 | Q>H | No |
ClinGen ExAC |
|
|
CA9081685 rs763258212 |
139 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081683 rs772842638 |
139 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081684 rs763258212 |
139 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 141 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA403358445 rs1568296993 |
141 | Q>K | No |
ClinGen Ensembl |
|
|
CA9081682 rs764982264 |
142 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1034101816 CA304380132 |
143 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA9081680 rs761641138 |
143 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed |
|
CA9081678 rs768644417 |
145 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA403358341 rs866352473 |
147 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs775091397 CA9081677 |
147 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081676 rs775091397 |
147 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA304380129 rs866352473 |
147 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1389567496 CA403358307 |
148 | E>D | No |
ClinGen gnomAD |
|
|
rs575056664 CA9081673 |
150 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs575056664 CA9081672 |
150 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs745506756 CA9081674 |
150 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748592436 CA9081671 |
151 | K>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA304380115 rs867707323 |
152 | Q>K | No |
ClinGen Ensembl |
|
| TCGA novel | 153 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs866979683 CA403358194 |
155 | E>* | No |
ClinGen gnomAD |
|
|
CA304380111 rs866979683 |
155 | E>K | No |
ClinGen gnomAD |
|
|
CA403358184 rs1339480897 |
155 | E>V | No |
ClinGen gnomAD |
|
|
rs755554710 CA304380106 |
156 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA9081669 rs755554710 |
156 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1568296910 CA403358160 |
157 | M>I | No |
ClinGen Ensembl |
|
|
rs1309832688 CA403358164 |
157 | M>T | No |
ClinGen gnomAD |
|
|
rs751544012 CA9081668 |
159 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA403358089 rs1346471359 |
162 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1460003137 CA403358095 |
162 | T>S | No |
ClinGen TOPMed |
|
|
CA403358072 rs1370060254 |
164 | E>K | No |
ClinGen gnomAD |
|
|
rs371224074 CA9081665 |
167 | R>H | No |
ClinGen ESP ExAC gnomAD |
|
|
CA9081661 rs763973263 |
168 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA9081662 rs763973263 |
168 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA403358007 rs1269274308 |
169 | R>W | No |
ClinGen gnomAD |
|
|
CA403357979 rs1481893313 |
172 | A>T | No |
ClinGen gnomAD |
|
|
CA403357899 rs199984244 CA9081656 |
178 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1176651766 CA403357890 |
179 | R>C | No |
ClinGen TOPMed |
|
|
CA403357892 rs1176651766 |
179 | R>G | No |
ClinGen TOPMed |
|
|
rs890738741 CA304380079 |
179 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
| TCGA novel | 180 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs770714598 CA9081655 |
180 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1052353733 CA304380070 |
182 | R>Q | No |
ClinGen Ensembl |
|
|
rs781706693 CA403357812 |
183 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA403357756 rs1329790133 |
188 | G>S | No |
ClinGen gnomAD |
|
|
rs1393223543 CA403357700 |
190 | E>D | No |
ClinGen gnomAD |
|
|
rs747519855 CA9081651 |
193 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA403357523 rs1362929052 |
198 | D>E | No |
ClinGen gnomAD |
|
|
CA9081647 rs779038820 |
198 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763850291 CA9081644 |
204 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs1322047553 CA403357375 |
204 | N>K | No |
ClinGen TOPMed |
|
|
rs1203617827 CA403357359 |
205 | N>S | No |
ClinGen gnomAD |
|
|
rs1207302617 CA403357312 |
208 | G>D | No |
ClinGen gnomAD |
|
|
rs1350327812 CA403357293 |
209 | T>N | No |
ClinGen gnomAD |
|
|
rs752667656 CA9081642 |
211 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1568296792 CA403357230 |
212 | W>L | No |
ClinGen Ensembl |
|
|
rs767751658 CA9081591 |
215 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs759952507 CA9081590 |
218 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA403354988 rs1599892306 |
222 | S>G | No |
ClinGen Ensembl |
|
|
CA403354929 rs1333589582 |
225 | E>K | No |
ClinGen gnomAD |
|
|
rs1471162506 CA403354848 |
228 | E>K | No |
ClinGen gnomAD |
|
|
rs1159429266 CA403354797 |
230 | K>R | No |
ClinGen gnomAD |
|
|
CA9081585 rs770015387 |
231 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA9081584 rs371220220 |
232 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1181890918 CA403354768 |
232 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1462501623 CA403354712 |
235 | R>G | No |
ClinGen gnomAD |
|
|
CA304379057 rs1014670036 |
235 | R>K | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 235 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 235 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1599892195 CA403354697 |
236 | I>T | No |
ClinGen Ensembl |
|
|
rs1443637467 CA403354575 |
241 | R>Q | No |
ClinGen TOPMed |
|
|
CA403354578 rs1317195635 |
241 | R>W | No |
ClinGen gnomAD |
|
| TCGA novel | 243 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1445819118 CA403354210 |
251 | R>Q | No |
ClinGen gnomAD |
|
|
rs199703521 CA9081533 |
253 | E>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 253 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA403354134 rs1262716884 |
254 | R>Q | No |
ClinGen gnomAD |
|
|
rs750803352 CA403354144 |
254 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA9081531 rs765605326 |
256 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1219013892 CA403354082 |
256 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1291187393 CA403354066 |
257 | E>A | No |
ClinGen gnomAD |
|
|
CA403354047 rs1568295297 |
258 | K>Q | No |
ClinGen Ensembl |
|
|
CA403354008 rs1357032345 |
259 | A>T | No |
ClinGen gnomAD |
|
|
rs1285875158 CA403353964 |
261 | R>C | No |
ClinGen gnomAD |
|
|
rs371376477 CA9081530 |
261 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9081528 rs764248234 |
262 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA403353848 rs1363297528 |
265 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1416599099 CA403353798 |
267 | M>K | No |
ClinGen gnomAD |
|
|
rs1424739932 CA403353801 |
267 | M>V | No |
ClinGen gnomAD |
|
|
rs767785709 CA403353774 |
268 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774227634 CA9081523 |
270 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081522 rs770736305 |
270 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403353690 rs1347230485 |
271 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA403353640 rs1268425823 |
272 | K>R | No |
ClinGen gnomAD |
|
|
rs769277949 CA9081519 |
275 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1170602681 CA403353476 |
276 | H>L | No |
ClinGen gnomAD |
|
|
rs1291953113 CA403353492 |
276 | H>N | No |
ClinGen gnomAD |
|
|
CA403353419 rs780752827 |
278 | K>M | No |
ClinGen ExAC gnomAD |
|
|
CA9081517 rs780752827 |
278 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA9081515 rs746170233 |
285 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA9081513 rs757601367 |
293 | K>T | No |
ClinGen ExAC TOPMed |
|
|
CA304378807 rs977415590 |
295 | R>C | No |
ClinGen gnomAD |
|
|
rs1307684730 CA403351593 |
296 | S>C | No |
ClinGen Ensembl |
|
|
rs771865433 CA9081480 |
297 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA403351517 rs1382651018 |
299 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs778317029 CA9081477 |
301 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081478 rs749622565 |
301 | R>W | No |
ClinGen ExAC TOPMed |
|
|
CA9081475 rs560662203 |
303 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA304378482 rs551044617 |
304 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA304378479 rs992695258 |
305 | A>G | No |
ClinGen TOPMed |
|
|
CA9081473 rs755078191 |
308 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs780261607 CA9081471 |
309 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1240014982 CA403351055 |
315 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1355611706 CA403351068 |
315 | I>V | No |
ClinGen TOPMed |
|
|
CA9081466 rs753811318 |
317 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403350997 rs1287591106 |
317 | A>V | No |
ClinGen gnomAD |
|
|
CA9081463 rs763944157 |
321 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 323 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774885554 CA9081461 COSM1480941 |
324 | V>M | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1360253023 CA403350831 |
329 | P>T | No |
ClinGen gnomAD |
|
|
CA403350806 rs1400887024 |
332 | F>L | No |
ClinGen gnomAD |
|
|
rs201105368 CA9081460 |
334 | N>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs759237600 CA9081459 |
334 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA9081457 rs770273141 |
335 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081455 rs777126778 |
337 | T>S | No |
ClinGen ExAC |
|
|
rs1425354720 CA403350766 |
338 | V>M | No |
ClinGen gnomAD |
|
|
CA304378457 rs964784661 |
339 | A>V | No |
ClinGen TOPMed |
|
|
CA9081452 rs780138534 |
340 | D>N | No |
ClinGen ExAC gnomAD |
|
|
COSM3822757 CA403350729 rs1313709774 |
341 | M>V | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA9081451 rs758512766 |
343 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403350675 rs1266570087 |
345 | L>V | No |
ClinGen gnomAD |
|
|
CA9081448 rs372265731 CA9081449 |
349 | Q>H | No |
ClinGen ESP ExAC gnomAD |
|
|
rs534488397 CA304378413 |
350 | V>I | No |
ClinGen TOPMed |
|
| TCGA novel | 351 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1236857174 CA403350533 |
353 | E>D | No |
ClinGen TOPMed |
|
|
CA403350495 rs1302916793 |
357 | G>D | No |
ClinGen gnomAD |
|
|
CA304378407 rs929878950 |
357 | G>S | No |
ClinGen Ensembl |
|
|
CA304378404 rs200560369 |
360 | A>S | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA403350458 rs200560369 |
360 | A>T | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA403350447 rs865856318 |
361 | D>N | No |
ClinGen gnomAD |
|
|
CA304378402 rs865856318 |
361 | D>Y | No |
ClinGen gnomAD |
|
|
CA304378396 rs868578565 |
363 | W>L | No |
ClinGen gnomAD |
|
|
rs964526295 CA304378400 |
363 | W>R | No |
ClinGen TOPMed gnomAD |
|
|
rs201581975 CA403350407 |
364 | R>L | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA304378392 rs201581975 |
364 | R>Q | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs745952291 CA9081429 |
364 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs1377833256 CA403350403 |
365 | D>Y | No |
ClinGen gnomAD |
|
|
rs1177694997 CA403350374 |
366 | M>I | No |
ClinGen gnomAD |
|
|
rs1416728010 CA403350352 |
367 | T>I | No |
ClinGen gnomAD |
|
|
rs368947206 CA9081427 |
368 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9081425 rs777402329 |
371 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA304378379 rs866494558 |
373 | E>* | No |
ClinGen TOPMed |
|
|
CA304378381 rs866494558 |
373 | E>K | No |
ClinGen TOPMed |
|
|
CA403350240 rs1257978759 |
374 | I>V | No |
ClinGen gnomAD |
|
|
CA403350190 rs1308487338 |
376 | K>E | No |
ClinGen gnomAD |
|
|
rs1181223544 CA403350143 |
377 | L>H | No |
ClinGen gnomAD |
|
|
CA403350155 rs1447476312 |
377 | L>I | No |
ClinGen gnomAD |
|
|
CA403350128 rs1334513817 |
378 | R>C | No |
ClinGen gnomAD |
|
|
rs373966903 CA9081422 |
378 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA403350117 rs373966903 |
378 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1256513529 CA403350092 |
379 | K>N | No |
ClinGen TOPMed |
|
|
rs1031477859 CA304378371 |
380 | L>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA9081421 rs370534868 |
381 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1451028386 CA403350087 |
381 | E>K | No |
ClinGen gnomAD |
|
|
rs1158696741 CA403350062 |
382 | A>T | No |
ClinGen gnomAD |
|
|
CA9081420 rs751123629 |
383 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs968821657 CA304378351 |
384 | G>A | No |
ClinGen Ensembl |
|
|
CA403349981 rs1203573361 |
386 | G>R | No |
ClinGen gnomAD |
|
|
CA9081418 rs373257697 |
387 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1199648929 CA403347456 |
388 | G>D | No |
ClinGen gnomAD |
|
|
CA403349928 rs1242386857 |
388 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA9081396 rs760891337 |
390 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081395 rs547967161 |
390 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA403347432 rs760891337 |
390 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1324607016 CA403347421 |
391 | R>C | No |
ClinGen TOPMed |
|
|
rs1415742959 CA403347418 |
391 | R>H | No |
ClinGen gnomAD |
|
|
rs1317010882 CA403347410 |
392 | E>K | No |
ClinGen gnomAD |
|
|
CA403347408 rs1317010882 |
392 | E>Q | No |
ClinGen gnomAD |
|
|
rs1258330275 CA403347385 |
393 | G>E | No |
ClinGen gnomAD |
|
|
CA403347379 rs1220132648 |
394 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA9081393 rs760007589 |
395 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA304374923 rs376665574 |
396 | A>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA403347333 rs1333334600 |
396 | A>V | No |
ClinGen gnomAD |
|
|
rs1329833106 CA403347319 |
397 | S>F | No |
ClinGen gnomAD |
|
|
rs763163777 CA9081390 |
398 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1005402570 CA304374914 |
403 | Q>H | No |
ClinGen gnomAD |
|
|
rs1173238344 CA403347230 |
403 | Q>R | No |
ClinGen gnomAD |
|
|
rs773244712 CA9081389 |
404 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs747898988 CA9081387 |
405 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1248398407 CA403347191 |
406 | F>L | No |
ClinGen gnomAD |
|
|
rs1238614264 CA403347131 |
410 | T>I | No |
ClinGen gnomAD |
|
|
rs1489646652 CA403347123 |
411 | Y>C | No |
ClinGen gnomAD |
|
| TCGA novel | 411 | Y>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9081385 rs768608877 |
412 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1240108902 CA403347059 |
416 | V>I | No |
ClinGen gnomAD |
|
|
rs1244668540 CA403347036 |
418 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1446277629 CA403347027 |
419 | Q>H | No |
ClinGen gnomAD |
|
|
CA9081381 rs1333409671 |
420 | G>D | No |
ClinGen gnomAD |
|
|
CA403347009 rs1416264644 |
422 | E>G | No |
ClinGen gnomAD |
|
|
rs377058963 CA9081379 |
422 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs895607825 CA304374897 |
424 | K>R | No |
ClinGen Ensembl |
|
|
CA403346966 rs1378510400 |
425 | I>V | No |
ClinGen gnomAD |
|
|
CA9081378 rs778381426 |
426 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403346949 rs778381426 |
426 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081377 rs532574991 |
426 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 427 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9081375 rs180738658 |
427 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1482118753 CA403346915 |
428 | G>D | No |
ClinGen gnomAD |
|
|
CA403346899 rs1357290909 |
429 | G>A | No |
ClinGen TOPMed |
|
|
rs1236554449 CA403346881 |
430 | P>L | No |
ClinGen gnomAD |
|
| TCGA novel | 432 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1443754807 CA403346772 |
434 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA9081374 rs759954761 |
434 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081373 rs752008930 |
435 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA403346696 rs1215247689 |
438 | E>K | No |
ClinGen gnomAD |
|
|
CA403346600 rs1355135089 COSM995056 |
440 | L>F | endometrium Variant assessed as Somatic; 5.177e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA304374892 rs868235171 |
443 | Q>K | No |
ClinGen Ensembl |
|
|
CA403346482 rs1285038145 |
444 | L>P | No |
ClinGen gnomAD |
|
|
rs762886918 CA9081371 |
445 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA9081370 rs773360251 |
445 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081369 rs765332572 |
447 | H>N | No |
ClinGen ExAC gnomAD |
|
|
CA9081368 rs762094047 |
448 | M>I | No |
ClinGen ExAC |
|
|
rs1420311004 CA403346385 |
448 | M>V | No |
ClinGen gnomAD |
|
|
CA9081367 rs777040239 |
449 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs772069555 CA9081363 |
450 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081364 rs772069555 |
450 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746865447 CA9081365 |
450 | R>W | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 451 | A>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs778457363 CA9081361 |
451 | A>S | No |
ClinGen ExAC |
|
|
rs756811264 CA9081360 |
451 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs755272837 CA9081357 |
452 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs777472046 CA9081358 |
452 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA403345579 rs1236458705 |
454 | R>C | No |
ClinGen gnomAD |
|
|
CA403345576 rs1374543077 |
454 | R>H | No |
ClinGen gnomAD |
|
|
CA403345546 rs1330496380 |
456 | R>H | No |
ClinGen gnomAD |
|
| TCGA novel | 457 | H>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA403345522 rs1425337103 |
458 | Q>E | No |
ClinGen Ensembl |
|
|
rs1442034906 CA403345490 |
460 | V>M | No |
ClinGen TOPMed |
|
|
rs12977742 CA304374446 |
466 | Y>* | No |
ClinGen Ensembl |
|
|
CA304374443 rs12971866 |
467 | K>E | No |
ClinGen Ensembl |
|
|
rs1179662922 CA403345353 |
471 | E>G | No |
ClinGen gnomAD |
|
|
rs770872634 CA403345362 |
471 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770872634 CA9081326 |
471 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403345313 rs1421196675 |
473 | G>S | No |
ClinGen gnomAD |
|
| TCGA novel | 474 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA403345287 rs1200053237 |
474 | V>M | No |
ClinGen gnomAD |
|
|
CA9081324 rs772735810 |
476 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs769330852 CA9081323 |
476 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747811589 CA9081322 |
476 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA9081321 rs780763984 |
477 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780763984 CA304374418 |
477 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376878075 CA9081320 |
478 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376878075 CA403345134 |
478 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA403345122 rs1190495326 |
479 | L>V | No |
ClinGen TOPMed |
|
|
CA403345056 rs1395139397 |
481 | P>L | No |
ClinGen gnomAD |
|
|
CA403345029 rs754868791 |
483 | L>F | No |
ClinGen gnomAD |
|
|
CA304374411 rs754868791 |
483 | L>V | No |
ClinGen gnomAD |
|
|
CA403344984 rs1422438993 |
486 | E>Q | No |
ClinGen TOPMed |
|
|
CA403344960 rs1159732817 |
487 | P>L | No |
ClinGen gnomAD |
|
|
rs12977519 CA304374403 |
487 | P>S | No |
ClinGen Ensembl |
|
|
rs754436865 CA9081316 |
488 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778027693 CA304374399 |
488 | Q>L | No |
ClinGen TOPMed gnomAD |
|
|
rs547983366 CA9081315 |
489 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs1599884334 CA403344934 |
489 | S>Y | No |
ClinGen Ensembl |
|
|
CA304374388 rs12977508 |
490 | P>R | No |
ClinGen Ensembl |
|
|
rs12977510 CA304374392 |
490 | P>T | No |
ClinGen Ensembl |
|
|
CA403344904 rs1424676917 |
491 | S>T | No |
ClinGen gnomAD |
|
|
rs1191612364 CA403344894 |
492 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA304374384 rs907098575 COSM3787642 |
492 | R>H | pancreas [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA403344757 rs1176552462 |
495 | E>G | No |
ClinGen gnomAD |
|
|
rs965699374 CA304374261 |
495 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs2074789 CA403344686 |
499 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs2074789 CA9081279 |
499 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs748223072 CA403344675 |
500 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748223072 CA9081278 |
500 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307632880 CA403344659 |
501 | P>L | No |
ClinGen gnomAD |
|
|
rs747215434 CA9081275 |
501 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA9081273 rs758119857 |
503 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA304374243 rs758119857 |
503 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1309693560 CA403344628 |
504 | P>L | No |
ClinGen TOPMed |
|
|
rs1231606898 CA403344618 |
505 | G>R | No |
ClinGen gnomAD |
|
|
rs1340086982 CA403344593 |
506 | P>S | No |
ClinGen gnomAD |
|
|
CA9081272 rs201253601 |
508 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA403344514 rs1156714914 |
509 | E>G | No |
ClinGen gnomAD |
|
|
CA403344478 rs1400009460 |
510 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA403344476 rs1400009460 |
510 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA403344472 rs1204709005 |
511 | G>S | No |
ClinGen TOPMed |
|
|
rs753854187 CA403344430 |
513 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs757172712 CA403344437 |
513 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs757172712 CA9081270 |
513 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA9081269 rs753854187 |
513 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1486337803 CA403344403 |
515 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA9081266 rs775217403 |
516 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA9081265 rs368780790 |
517 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs942131606 CA304374215 |
517 | V>M | No |
ClinGen TOPMed |
|
|
rs763364403 CA9081264 |
519 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA403344311 rs748577553 |
520 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403344309 rs748577553 |
520 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770238123 CA9081262 |
520 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1198307 rs748577553 CA9081261 |
520 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs777249426 CA9081260 |
522 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA304374197 rs933496746 |
522 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA403344276 rs1297631880 |
523 | T>P | No |
ClinGen gnomAD |
|
|
CA403344261 rs1430004782 |
524 | E>K | No |
ClinGen gnomAD |
|
|
rs905202069 CA304374193 |
525 | G>D | No |
ClinGen Ensembl |
|
|
rs1235401230 CA403344192 |
526 | D>E | No |
ClinGen TOPMed |
|
|
CA9081256 rs780189887 |
527 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs747092999 CA9081257 |
527 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758640325 CA9081255 |
528 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403344176 rs1045047734 |
528 | D>H | No |
ClinGen Ensembl |
|
|
CA304374171 rs1045047734 |
528 | D>N | No |
ClinGen Ensembl |
|
|
CA9081251 rs753715429 |
529 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA9081252 CA9081253 rs757133531 |
529 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199696376 CA304374151 |
530 | D>E | No |
ClinGen Ensembl |
|
|
CA9081248 rs777769596 |
530 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1219843347 CA403344093 |
531 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1453815447 CA403344051 |
532 | E>A | No |
ClinGen TOPMed |
|
|
CA403344066 rs1274077416 |
532 | E>K | No |
ClinGen gnomAD |
|
|
CA403344012 rs1316279171 |
533 | G>S | No |
ClinGen gnomAD |
|
|
CA9081242 rs752276114 |
534 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081240 rs759229508 |
537 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA403343799 rs1290505711 |
539 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA9081239 rs751269807 |
539 | A>V | No |
ClinGen ExAC |
|
|
rs1393513031 CA403343776 |
540 | V>M | No |
ClinGen gnomAD |
|
|
rs765511076 CA9081235 |
541 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403343705 rs1421022867 |
543 | E>K | No |
ClinGen gnomAD |
|
|
rs776939629 CA9081233 |
544 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1428533316 CA403343653 |
544 | E>V | No |
ClinGen gnomAD |
|
|
rs927049693 CA304374069 |
547 | I>M | No |
ClinGen TOPMed |
|
|
CA403343425 rs1189945805 |
549 | Q>* | No |
ClinGen gnomAD |
|
|
rs760698740 CA9081231 |
550 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs374665182 CA9081229 |
551 | L>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs746055523 CA403343298 |
552 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA403343326 rs1215936674 |
552 | D>N | No |
ClinGen gnomAD |
|
|
CA403343290 rs1250909614 |
553 | D>N | No |
ClinGen gnomAD |
|
|
CA403343262 rs1205334185 |
554 | Y>H | No |
ClinGen gnomAD |
|
|
rs1299241295 CA403343175 |
555 | D>Y | No |
ClinGen gnomAD |
|
|
rs1370144865 CA403343143 |
556 | A>T | No |
ClinGen gnomAD |
|
|
rs1025442513 CA403343087 |
557 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
CA403343099 rs1025442513 |
557 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA304374045 rs1025442513 |
557 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA9081223 rs756148437 |
559 | Y>D | No |
ClinGen ExAC gnomAD |
|
|
rs1355817175 CA403342911 |
561 | P>L | No |
ClinGen gnomAD |
|
|
rs371323853 CA9081221 |
562 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA403342898 rs1568290953 |
562 | R>Q | No |
ClinGen Ensembl |
|
|
rs371323853 CA9081222 COSM1392465 |
562 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs910222279 CA304374042 |
564 | L>F | No |
ClinGen gnomAD |
|
|
rs751171863 CA9081219 |
565 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs1481729113 CA403342713 |
566 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA403342707 rs1481729113 |
566 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs761140332 CA9081214 |
567 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs1406274773 CA403342691 |
567 | H>Q | No |
ClinGen gnomAD |
|
|
rs761140332 CA9081215 |
567 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA304374002 rs776025793 |
568 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403342689 rs1347070939 |
568 | E>K | No |
ClinGen gnomAD |
|
|
CA9081212 rs772134055 |
569 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1305988033 CA403342669 |
570 | P>S | No |
ClinGen gnomAD |
|
|
rs771204896 CA9081210 |
572 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748994497 CA9081208 |
573 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1300570995 CA403342648 |
573 | A>V | No |
ClinGen gnomAD |
|
|
rs777676313 CA9081207 |
574 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs367932696 CA9081206 |
575 | V>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs367932696 CA9081205 |
575 | V>M | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1418372487 CA403342631 |
577 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1418372487 CA403342630 |
577 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs962540694 CA304373985 |
578 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs374814542 CA9081204 |
579 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9081203 rs754383114 |
581 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081202 rs746545132 |
582 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA304373979 rs889092455 |
584 | R>C | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 586 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs758102743 CA9081200 |
587 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1318364481 CA403342491 |
588 | S>W | No |
ClinGen gnomAD |
|
|
rs1413664069 CA403342482 |
589 | R>H | No |
ClinGen gnomAD |
|
|
rs768024454 CA9081195 |
590 | Q>R | No |
ClinGen ExAC |
|
|
rs774518960 CA9081192 |
591 | Q>H | No |
ClinGen ExAC |
|
|
rs759483992 CA9081193 |
591 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA304373959 rs759483992 |
591 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs868092144 CA304373946 |
592 | L>F | No |
ClinGen TOPMed |
|
|
rs868092144 CA304373954 |
592 | L>I | No |
ClinGen TOPMed |
|
|
CA403342428 rs1445027088 |
593 | Q>L | No |
ClinGen gnomAD |
|
|
CA304373941 rs902014712 |
594 | V>L | No |
ClinGen TOPMed |
|
| TCGA novel | 595 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9081190 rs763208736 |
595 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763208736 CA403342409 |
595 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1305875293 CA403342268 |
599 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1294910792 CA403342260 |
600 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 604 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9081153 rs368303299 |
606 | F>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368303299 CA403342166 |
606 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| rs751667810 | 607 | F>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM289198 CA9081150 rs371228649 |
608 | R>Q | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA9081152 rs374408117 |
608 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed |
|
|
rs1459093992 CA403342126 |
609 | R>W | No |
ClinGen gnomAD |
|
|
CA403342107 rs1352313665 |
611 | K>Q | No |
ClinGen gnomAD |
|
|
rs879617658 CA304373506 |
611 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs750556716 CA9081149 |
613 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1411086242 CA403342092 |
613 | G>S | No |
ClinGen gnomAD |
|
|
CA403342063 rs1454076190 |
617 | D>N | No |
ClinGen gnomAD |
|
|
rs202198597 CA9081146 |
619 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA403342048 rs1193189511 |
619 | A>T | No |
ClinGen gnomAD |
|
|
rs1305849252 CA403342030 |
621 | F>L | No |
ClinGen gnomAD |
|
|
rs936879392 CA304373495 |
621 | F>V | No |
ClinGen Ensembl |
|
|
CA304373490 rs888177323 |
622 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA9081144 rs760454759 |
623 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs775439498 CA9081143 |
625 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA403342001 rs1370033736 |
625 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
rs978214109 CA304373480 |
627 | L>F | No |
ClinGen gnomAD |
|
|
rs944092670 CA304373479 |
627 | L>P | No |
ClinGen Ensembl |
|
|
CA9081140 rs773818588 |
629 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770474199 CA9081139 |
631 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081137 COSM1198309 rs370352349 |
639 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1178679703 CA403341841 |
639 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
COSM1392463 rs1568290119 CA403341829 |
641 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs1314780892 CA403341570 |
661 | T>M | No |
ClinGen gnomAD |
|
|
CA304373461 rs973702786 |
666 | D>E | No |
ClinGen Ensembl |
|
|
rs1242358687 CA403341487 |
667 | N>H | No |
ClinGen TOPMed |
|
|
CA9081128 rs760468314 |
667 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA9081127 rs760468314 |
667 | N>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 669 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9081116 rs772616027 |
687 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs376455756 CA9081117 |
687 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA403341190 rs1405282493 |
688 | K>R | No |
ClinGen TOPMed |
|
|
rs746366510 CA9081115 |
690 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs1401398752 CA403341164 |
690 | S>F | No |
ClinGen TOPMed |
|
|
rs1599882345 CA403341157 |
691 | T>K | No |
ClinGen Ensembl |
|
| TCGA novel | 691 | T>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9081114 rs779630431 |
693 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA403341109 rs1303579733 |
695 | F>L | No |
ClinGen TOPMed |
|
|
CA403341087 rs1290906224 |
697 | E>K | No |
ClinGen gnomAD |
|
|
rs558114212 CA304373439 |
698 | A>T | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs199729475 CA9081112 |
698 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA403341046 rs1384761069 |
699 | C>W | No |
ClinGen gnomAD |
|
|
CA9081110 rs756257561 COSM3692659 |
700 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA304373427 rs1024724333 |
701 | D>E | No |
ClinGen Ensembl |
|
|
CA403341029 rs1392474063 |
701 | D>N | No |
ClinGen gnomAD |
|
|
rs1475550403 CA403340955 |
706 | A>T | No |
ClinGen gnomAD |
|
|
rs1011949575 CA304373421 |
709 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1011949575 CA304373422 |
709 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA403340916 rs751426762 |
709 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9081105 rs751426762 |
709 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1479674951 CA403340893 |
711 | H>N | No |
ClinGen TOPMed gnomAD |
|
|
rs565999503 CA9081103 |
711 | H>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9081102 rs772632241 |
712 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371204493 CA9081100 |
714 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9081101 rs371204493 |
714 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs746239817 CA9081097 |
717 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA9081096 rs774941496 |
718 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA403340815 rs1369082344 |
719 | I>M | No |
ClinGen gnomAD |
|
| TCGA novel | 720 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs368184093 CA9081093 |
725 | N>I | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 728 | W>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1279019288 CA403340705 |
730 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1279019288 CA403340706 |
730 | Y>S | No |
ClinGen TOPMed |
|
|
rs1599882220 CA403340692 |
731 | S>P | No |
ClinGen Ensembl |
|
|
CA403340677 rs748311809 |
732 | H>P | No |
ClinGen ExAC gnomAD |
|
|
CA9081091 rs748311809 |
732 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1451053631 CA403340659 COSM995035 |
733 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA403340656 rs1451053631 |
733 | R>L | No |
ClinGen gnomAD |
|
|
CA403340634 rs1222596214 |
735 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs751381616 CA9081088 |
736 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs750426626 CA9081085 |
739 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1339324233 CA403340501 |
741 | A>V | No |
ClinGen gnomAD |
|
|
CA403340479 rs2158935 |
742 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs764641492 CA9081084 |
742 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs550085862 CA9081080 |
755 | R>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1185125834 CA403339066 COSM566206 |
757 | R>W | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
| TCGA novel | 758 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
No associated diseases with Q8WUQ7
Functions
7 GO annotations of cellular component
| Name | Definition |
|---|---|
| catalytic step 2 spliceosome | A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| nuclear speck | A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| spliceosomal complex | Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| RNA binding | Binding to an RNA molecule or a portion thereof. |
16 GO annotations of biological process
| Name | Definition |
|---|---|
| cellular response to interleukin-1 | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-1 stimulus. |
| cellular response to lipopolysaccharide | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria. |
| cellular response to tumor necrosis factor | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus. |
| innate immune response | Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. |
| mRNA cis splicing, via spliceosome | The joining together, after removal of an intervening sequence composed of one or more introns, of two segments of the same RNA molecule via spliceosomal catalysis to produce an mRNA composed only of exon sequences that all came from the same primary transcript. |
| mRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. |
| negative regulation of I-kappaB kinase/NF-kappaB signaling | Any process that stops, prevents, or reduces the frequency, rate or extent of -kappaB kinase/NF-kappaB signaling. |
| negative regulation of innate immune response | Any process that stops, prevents, or reduces the frequency, rate or extent of the innate immune response. |
| negative regulation of interferon-beta production | Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-beta production. |
| negative regulation of interleukin-8 production | Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-8 production. |
| negative regulation of lipopolysaccharide-mediated signaling pathway | Any process that stops, prevents, or reduces the frequency, rate or extent of signaling in response to detection of lipopolysaccharide. |
| negative regulation of NF-kappaB transcription factor activity | Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB. |
| negative regulation of protein phosphorylation | Any process that stops, prevents or reduces the rate of addition of phosphate groups to amino acids within a protein. |
| negative regulation of toll-like receptor signaling pathway | Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor signaling pathway. |
| negative regulation of tumor necrosis factor production | Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production. |
| negative regulation of type I interferon-mediated signaling pathway | Any process that decreases the rate, frequency or extent of a type I interferon-mediated signaling pathway. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MGRDTRSRSR | SAGRRGRRRQ | SQSGSRSRSR | SHGRRNRRRR | EDEGRRRRRR | RSRERRSDSE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EERWQRSGMR | SRSPPRPKWH | SRDGSSQSDS | GEEQSRGQWA | RRRRRARSWS | PSSSASSSAS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PGRSQSPRAA | AAALSQQQSL | QERLRLREER | KQQEELMKAF | ETPEEKRARR | LAKKEAKERK |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KREKMGWGEE | YMGYTNTDNP | FGDNNLLGTF | IWNKALEKKG | ISHLEEKELK | ERNKRIQEDN |
| 250 | 260 | 270 | 280 | 290 | 300 |
| RLELQKVKQL | RLEREREKAM | REQELEMLQR | EKEAEHFKTW | EEQEDNFHLQ | QAKLRSKIRI |
| 310 | 320 | 330 | 340 | 350 | 360 |
| RDGRAKPIDL | LAKYISAEDD | DLAVEMHEPY | TFLNGLTVAD | MEDLLEDIQV | YMELEQGKNA |
| 370 | 380 | 390 | 400 | 410 | 420 |
| DFWRDMTTIT | EDEISKLRKL | EASGKGPGER | REGVNASVSS | DVQSVFKGKT | YNQLQVIFQG |
| 430 | 440 | 450 | 460 | 470 | 480 |
| IEGKIRAGGP | NLDMGYWESL | LQQLRAHMAR | ARLRERHQDV | LRQKLYKLKQ | EQGVESEPLF |
| 490 | 500 | 510 | 520 | 530 | 540 |
| PILKQEPQSP | SRSLEPEDAA | PTPPGPSSEG | GPAEAEVDGA | TPTEGDGDGD | GEGEGEGEAV |
| 550 | 560 | 570 | 580 | 590 | 600 |
| LMEEDLIQQS | LDDYDAGRYS | PRLLTAHELP | LDAHVLEPDE | DLQRLQLSRQ | QLQVTGDASE |
| 610 | 620 | 630 | 640 | 650 | 660 |
| SAEDIFFRRA | KEGMGQDEAQ | FSVEMPLTGK | AYLWADKYRP | RKPRFFNRVH | TGFEWNKYNQ |
| 670 | 680 | 690 | 700 | 710 | 720 |
| THYDFDNPPP | KIVQGYKFNI | FYPDLIDKRS | TPEYFLEACA | DNKDFAILRF | HAGPPYEDIA |
| 730 | 740 | 750 | |||
| FKIVNREWEY | SHRHGFRCQF | ANGIFQLWFH | FKRYRYRR |