Q8W5R2
PR
Gene name |
SGR2 (At1g31480, F27M3.29, T8E3.1) |
Protein name |
Phospholipase SGR2 |
Names |
Protein SHOOT GRAVITROPISM 2 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT1G31480 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8W5R2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8W5R2-F1 | Predicted | AlphaFoldDB |
114 variants for Q8W5R2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_1_11266243_C_G | 7 | H>D | No | 1000Genomes | |
| ENSVATH00055181 | 7 | H>R | No | 1000Genomes | |
| ENSVATH12526587 | 10 | T>A | No | 1000Genomes | |
| ENSVATH12526590 | 39 | H>Y | No | 1000Genomes | |
| tmp_1_11266348_C_A | 42 | Q>K | No | 1000Genomes | |
| tmp_1_11266361_C_T | 46 | A>V | No | 1000Genomes | |
| ENSVATH00055185 | 64 | V>I | No | 1000Genomes | |
| ENSVATH12526638 | 75 | V>I | No | 1000Genomes | |
| tmp_1_11266573_G_T | 77 | R>L | No | 1000Genomes | |
| ENSVATH12526639 | 97 | I>T | No | 1000Genomes | |
| ENSVATH12526706 | 120 | S>T | No | 1000Genomes | |
| ENSVATH00055191 | 124 | K>R | No | 1000Genomes | |
| ENSVATH01141848 | 127 | V>I | No | 1000Genomes | |
| ENSVATH00055193 | 145 | S>R | No | 1000Genomes | |
| tmp_1_11267169_T_A | 190 | F>Y | No | 1000Genomes | |
| tmp_1_11267232_T_C | 211 | V>A | No | 1000Genomes | |
| tmp_1_11267235_C_T | 212 | A>V | No | 1000Genomes | |
| ENSVATH04690104 | 238 | S>P | No | 1000Genomes | |
| ENSVATH00055200 | 239 | S>T | No | 1000Genomes | |
| ENSVATH04690106 | 244 | A>T | No | 1000Genomes | |
| ENSVATH04690107 | 257 | L>V | No | 1000Genomes | |
| ENSVATH12526777 | 258 | N>I | No | 1000Genomes | |
| tmp_1_11267697_G_A | 268 | V>I | No | 1000Genomes | |
| ENSVATH12526812 | 294 | L>F | No | 1000Genomes | |
| ENSVATH14027920 | 335 | G>V | No | 1000Genomes | |
| ENSVATH14027921 | 336 | N>D | No | 1000Genomes | |
| tmp_1_11268184_C_A | 336 | N>K | No | 1000Genomes | |
| ENSVATH14027922 | 347 | R>C | No | 1000Genomes | |
| tmp_1_11268230_C_T | 352 | H>Y | No | 1000Genomes | |
| ENSVATH00055206 | 373 | S>N | No | 1000Genomes | |
| tmp_1_11268502_C_A | 411 | A>D | No | 1000Genomes | |
| ENSVATH00055210 | 463 | P>T | No | 1000Genomes | |
| ENSVATH04690140 | 467 | D>N | No | 1000Genomes | |
| tmp_1_11268993_C_A | 480 | P>H | No | 1000Genomes | |
| tmp_1_11269010_G_C | 486 | A>P | No | 1000Genomes | |
| ENSVATH12527038 | 487 | D>V | No | 1000Genomes | |
| ENSVATH12527039 | 489 | P>S | No | 1000Genomes | |
| ENSVATH04690142 | 490 | C>Y | No | 1000Genomes | |
| ENSVATH14027966 | 507 | N>K | No | 1000Genomes | |
| ENSVATH00055211 | 508 | N>S | No | 1000Genomes | |
| ENSVATH12527040 | 509 | P>L | No | 1000Genomes | |
| ENSVATH00055212 | 511 | K>R | No | 1000Genomes | |
| ENSVATH04690143 | 513 | T>I | No | 1000Genomes | |
| tmp_1_11269091_A_C | 513 | T>P | No | 1000Genomes | |
| ENSVATH04690144 | 514 | G>D | No | 1000Genomes | |
| ENSVATH04690145 | 519 | T>M | No | 1000Genomes | |
| ENSVATH14027967 | 529 | H>Y | No | 1000Genomes | |
| tmp_1_11269157_G_C | 535 | E>Q | No | 1000Genomes | |
| ENSVATH14027968 | 536 | D>N | No | 1000Genomes | |
| ENSVATH01141902 | 537 | P>L | No | 1000Genomes | |
| ENSVATH04690147 | 544 | V>F | No | 1000Genomes | |
| ENSVATH00055213 | 546 | A>D | No | 1000Genomes | |
| ENSVATH12527042 | 548 | V>M | No | 1000Genomes | |
| tmp_1_11269205_G_A | 551 | E>K | No | 1000Genomes | |
| ENSVATH14027969 | 557 | E>G | No | 1000Genomes | |
| ENSVATH12527043 | 560 | H>Y | No | 1000Genomes | |
| ENSVATH01141904 | 572 | V>G | No | 1000Genomes | |
| ENSVATH04690148 | 573 | P>Q | No | 1000Genomes | |
| ENSVATH14027970 | 575 | G>E | No | 1000Genomes | |
| ENSVATH14027971 | 576 | A>V | No | 1000Genomes | |
| ENSVATH12527115 | 584 | P>A | No | 1000Genomes | |
| ENSVATH12527116 | 585 | S>L | No | 1000Genomes | |
| ENSVATH04690150 | 594 | K>E | No | 1000Genomes | |
| ENSVATH14027972 | 597 | V>L | No | 1000Genomes | |
| ENSVATH00055217 | 598 | N>K | No | 1000Genomes | |
| ENSVATH04690151 | 600 | N>D | No | 1000Genomes | |
| tmp_1_11269356_A_G | 601 | N>S | No | 1000Genomes | |
| tmp_1_11269594_A_C | 613 | N>T | No | 1000Genomes | |
| ENSVATH00055221 | 616 | R>S | No | 1000Genomes | |
| tmp_1_11269614_G_T | 620 | A>S | No | 1000Genomes | |
| ENSVATH00055223 | 623 | L>Q | No | 1000Genomes | |
| ENSVATH12527121 | 624 | S>A | No | 1000Genomes | |
| ENSVATH04690161 | 627 | A>T | No | 1000Genomes | |
| tmp_1_11269648_C_T | 631 | S>L | No | 1000Genomes | |
| ENSVATH01141918 | 640 | A>P | No | 1000Genomes | |
| ENSVATH01141919 | 640 | A>V | No | 1000Genomes | |
| ENSVATH04690166 | 649 | V>L | No | 1000Genomes | |
| ENSVATH04690167 | 655 | D>Y | No | 1000Genomes | |
| ENSVATH12527123 | 658 | T>I | No | 1000Genomes | |
| ENSVATH04690168 | 658 | T>S | No | 1000Genomes | |
| tmp_1_11269876_A_G | 672 | K>E | No | 1000Genomes | |
| tmp_1_11269976_A_T | 675 | T>S | No | 1000Genomes | |
| ENSVATH14028018 | 688 | A>S | No | 1000Genomes | |
| ENSVATH00055226 | 692 | I>V | No | 1000Genomes | |
| ENSVATH14028023 | 704 | E>Q | No | 1000Genomes | |
| ENSVATH04690178 | 708 | A>V | No | 1000Genomes | |
| ENSVATH14028024 | 717 | R>Q | No | 1000Genomes | |
| ENSVATH12527240 | 742 | P>A | No | 1000Genomes | |
| ENSVATH14028026 | 742 | P>L | No | 1000Genomes | |
| ENSVATH14028026 | 742 | P>R | No | 1000Genomes | |
| ENSVATH00055231 | 743 | E>K | No | 1000Genomes | |
| ENSVATH04690181 | 751 | H>Y | No | 1000Genomes | |
| tmp_1_11270490_G_C | 757 | L>F | No | 1000Genomes | |
| ENSVATH00055232 | 770 | A>S | No | 1000Genomes | |
| ENSVATH04690190 | 784 | T>K | No | 1000Genomes | |
| ENSVATH01141932 | 802 | E>D | No | 1000Genomes | |
| ENSVATH04690192 | 812 | S>P | No | 1000Genomes | |
| tmp_1_11270939_A_C | 818 | I>L | No | 1000Genomes | |
| ENSVATH12527391 | 835 | E>D | No | 1000Genomes | |
| tmp_1_11271315_A_G | 864 | K>E | No | 1000Genomes | |
| tmp_1_11271342_G_A | 873 | G>R | No | 1000Genomes | |
| ENSVATH04690197 | 875 | N>K | No | 1000Genomes | |
| ENSVATH04690199 | 878 | T>M | No | 1000Genomes | |
| ENSVATH00055238 | 882 | E>A | No | 1000Genomes | |
| ENSVATH00055238 | 882 | E>V | No | 1000Genomes | |
| ENSVATH14028030 | 889 | D>Y | No | 1000Genomes | |
| ENSVATH14028031 | 890 | S>L | No | 1000Genomes | |
| ENSVATH00055239 | 893 | P>T | No | 1000Genomes | |
| ENSVATH04690203 | 899 | R>S | No | 1000Genomes | |
| ENSVATH00055240 | 919 | T>A | No | 1000Genomes | |
| ENSVATH04690206 | 924 | A>V | No | 1000Genomes | |
| ENSVATH04690207 | 927 | K>N | No | 1000Genomes | |
| ENSVATH12527394 | 929 | Y>N | No | 1000Genomes | |
| ENSVATH07537887 | 933 | P>S | No | 1000Genomes |
No associated diseases with Q8W5R2
1 regional properties for Q8W5R2
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | DDHD domain | 669 - 868 | IPR004177 |
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| plant-type vacuole membrane | The lipid bilayer surrounding a vacuole that retains the same shape regardless of cell cycle phase. The membrane separates its contents from the cytoplasm of the cell. An example of this component is found in Arabidopsis thaliana. |
| plasmodesma | A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell. |
| vacuole | A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| metal ion binding | Binding to a metal ion. |
| phospholipase A1 activity | Catalysis of the reaction: phosphatidylcholine + H2O = 2-acylglycerophosphocholine + a carboxylate. |
| phospholipase activity | Catalysis of the hydrolysis of a glycerophospholipid. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| amyloplast organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an amyloplast. An amyloplast is a plastid whose main function is to synthesize and store starch. |
| detection of gravity | The series of events in which a gravitational stimulus is received and converted into a molecular signal. |
| lipid catabolic process | The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. |
| negative gravitropism | The orientation of plant parts away from gravity. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEDRETHLGT | REVNETSPDL | LKNTPSNIAR | LEDVIEQCHG | RQKYLAQTRS | PSDGSDVRWY |
| 70 | 80 | 90 | 100 | 110 | 120 |
| FCKVPLAENE | LAASVPRTDV | VGKSEYFRFG | MRDSLAIEAS | FLQREDELLS | LWWKEYAECS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| EGPKLQVNSK | KKSIETPSEA | SVSSSLYEVE | EERVGVPVKG | GLYEVDLVRR | HCFPVYWNGD |
| 190 | 200 | 210 | 220 | 230 | 240 |
| NRRVLRGHWF | ARKGGLDWLP | IPETVSEQLE | VAYRNKVWRR | RSFQPSGLFA | ARIDLQGSSL |
| 250 | 260 | 270 | 280 | 290 | 300 |
| GLHALFTGED | DTWEAWLNVD | PSGFSGIVGY | TGNGIKLRRG | YAGSYSPKPT | QEELRQQKEE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| EMDDYCSQVP | VRHLVFMVHG | IGQKGEKSNL | VDDVGNFRQI | TAALAERHLT | SHQLSTQRVL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| FIPCQWRKGL | KLSGEAAVDK | CTLDGVRRFR | EMLSATVHDV | LYYMSPIYCQ | AIIDSVSKQL |
| 430 | 440 | 450 | 460 | 470 | 480 |
| NRLYLKFLKR | NPDYVGKISI | YGHSLGSVLS | YDILCHQHNL | SSPFPMDSVY | KKFFPDEESP |
| 490 | 500 | 510 | 520 | 530 | 540 |
| PTPAKADKPC | SSHPSSNFEP | EKSDQLNNPE | KITGQDNNTM | AKEPTVLEHH | DVIQEDPSLI |
| 550 | 560 | 570 | 580 | 590 | 600 |
| SDSVVANVGL | ERRGGQEDDH | HDSSGAISSQ | DVPDGADCRT | PDSPSCSQEQ | SWDKESVNSN |
| 610 | 620 | 630 | 640 | 650 | 660 |
| NEERIKLLQD | EVNSLRSKVA | QLLSENARIL | SDEKAKTSVA | PKELNNEKVQ | TEDADAPTSF |
| 670 | 680 | 690 | 700 | 710 | 720 |
| TPFIKYQKLE | FKVDTFFAVG | SPLGVFLALR | NIRLGIGKGK | DYWEEENAIE | EMPACRRMFN |
| 730 | 740 | 750 | 760 | 770 | 780 |
| IFHPYDPVAY | RVEPLVCKEY | LPERPVIIPY | HRGGKRLHIG | LQDFREDFAA | RSQRIMNHFD |
| 790 | 800 | 810 | 820 | 830 | 840 |
| SVRTRVLTIC | QSKSADNLDE | MEETDDEKDD | RSYGSLMIER | LTGTRDGRID | HMLQEKTFEH |
| 850 | 860 | 870 | 880 | 890 | 900 |
| PYLQAIGAHT | NYWRDQDTAL | FIIKHLYREL | PDGPNSPTES | TEGDDSPKDS | SRPHSWIDRR |
| 910 | 920 | 930 | |||
| EADYDDEELP | LTFSDKQITR | SFSAEAKKYL | KKP |