Q8RWG3
Gene name |
RER6 |
Protein name |
Protein RETICULATA-RELATED 6, chloroplastic |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT3G56140 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8RWG3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8RWG3-F1 | Predicted | AlphaFoldDB |
51 variants for Q8RWG3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH14442343 | 3 | L>P | No | 1000Genomes | |
| ENSVATH06325137 | 10 | A>V | No | 1000Genomes | |
| ENSVATH12788986 | 22 | S>Y | No | 1000Genomes | |
| tmp_3_20829525_C_A | 40 | T>N | No | 1000Genomes | |
| tmp_3_20829531_A_C | 42 | E>A | No | 1000Genomes | |
| tmp_3_20829624_C_T | 73 | P>L | No | 1000Genomes | |
| ENSVATH00422270 | 79 | A>T | No | 1000Genomes | |
| ENSVATH06325140 | 84 | K>Q | No | 1000Genomes | |
| tmp_3_20829662_T_C | 86 | S>P | No | 1000Genomes | |
| ENSVATH06325143 | 91 | S>P | No | 1000Genomes | |
| tmp_3_20829680_G_A | 92 | E>K | No | 1000Genomes | |
| ENSVATH02513086 | 101 | S>L | No | 1000Genomes | |
| ENSVATH12788988 | 104 | E>V | No | 1000Genomes | |
| ENSVATH02513087 | 109 | P>R | No | 1000Genomes | |
| ENSVATH02513088 | 118 | S>P | No | 1000Genomes | |
| ENSVATH06325145 | 120 | P>S | No | 1000Genomes | |
| ENSVATH06325146 | 123 | V>L | No | 1000Genomes | |
| ENSVATH02513089 | 125 | K>R | No | 1000Genomes | |
| tmp_3_20829829_G_T | 141 | E>D | No | 1000Genomes | |
| tmp_3_20829839_A_T | 145 | M>L | No | 1000Genomes | |
| tmp_3_20829865_G_T | 153 | W>C | No | 1000Genomes | |
| tmp_3_20829944_C_A | 180 | L>I | No | 1000Genomes | |
| ENSVATH12788989 | 189 | R>I | No | 1000Genomes | |
| tmp_3_20829977_G_A | 191 | V>I | No | 1000Genomes | |
| tmp_3_20829980_G_A | 192 | E>K | No | 1000Genomes | |
| tmp_3_20829981_A_T | 192 | E>V | No | 1000Genomes | |
| tmp_3_20830044_A_G | 213 | N>S | No | 1000Genomes | |
| ENSVATH12788990 | 217 | D>E | No | 1000Genomes | |
| tmp_3_20830214_C_T | 242 | P>S | No | 1000Genomes | |
| tmp_3_20830236_A_T | 249 | D>V | No | 1000Genomes | |
| ENSVATH00422271 | 255 | I>L | No | 1000Genomes | |
| ENSVATH00422275 | 274 | G>A | No | 1000Genomes | |
| ENSVATH12788994 | 276 | S>L | No | 1000Genomes | |
| ENSVATH06325149 | 298 | F>L | No | 1000Genomes | |
| tmp_3_20830699_G_A | 300 | R>H | No | 1000Genomes | |
| tmp_3_20830752_A_C | 318 | S>R | No | 1000Genomes | |
| ENSVATH06325150 | 333 | M>L | No | 1000Genomes | |
| ENSVATH14442395 | 345 | G>R | No | 1000Genomes | |
| tmp_3_20830909_C_A | 370 | A>E | No | 1000Genomes | |
| tmp_3_20831032_G_T | 411 | R>I | No | 1000Genomes | |
| ENSVATH02513097 | 499 | I>L | No | 1000Genomes | |
| tmp_3_20831851_G_T | 560 | A>S | No | 1000Genomes | |
| ENSVATH02513098 | 562 | R>K | No | 1000Genomes | |
| ENSVATH12789017 | 576 | S>G | No | 1000Genomes | |
| ENSVATH14442399 | 593 | V>I | No | 1000Genomes | |
| ENSVATH00422278 | 618 | I>L | No | 1000Genomes | |
| ENSVATH06325158 | 622 | V>I | No | 1000Genomes | |
| ENSVATH06325160 | 669 | S>T | No | 1000Genomes | |
| tmp_3_20832566_G_A | 712 | S>N | No | 1000Genomes | |
| tmp_3_20832616_G_C | 729 | E>Q | No | 1000Genomes | |
| ENSVATH00422280 | 732 | T>A | No | 1000Genomes |
No associated diseases with Q8RWG3
1 regional properties for Q8RWG3
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Haem-binding uptake, Tiki superfamily, ChaN | 152 - 383 | IPR007314 |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. |
| chloroplast membrane | Either of the lipid bilayers that surround a chloroplast and form the chloroplast envelope. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9SIY5 | RER5 | Protein RETICULATA-RELATED 5, chloroplastic | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKLTTNDLFA | SQPLFHCPCS | SSSRPRRRRF | YGLHFPINLT | SEKNNSLSIV | ALSDSDLPSR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| TAFSRRAFLL | APPLLVSAAS | LFLKPSVSLA | SEESSSATVT | SPAESAAPPP | PPATTTPSPP |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PPVNKEETIT | SRIYDATAIG | EPMAMGKDKK | KVWEKLLNAR | VVYLGEAEQV | PTKDDKELEL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| EIVRNLRKRC | VESERQISVA | LEAFPLDLQD | QLNQYMDKRM | DGETLKSYVT | HWPAQRWQEY |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EPLLSYCRDN | SVRLIACGTP | LKVLRTVQAE | GIRGLSKSER | KLYTPPAGSG | FISGFSSFSR |
| 310 | 320 | 330 | 340 | 350 | 360 |
| RSTFDMSLPT | QIVPFGPSSY | LSAQARVVED | HTMSQVILQA | VADGGGTGLL | LVVTGASHVE |
| 370 | 380 | 390 | 400 | 410 | 420 |
| YGSRGTGLPA | RISRKFPKKN | QVVVLLDPER | QFLRREGETP | VADFLWYSAA | RPCSRNCFDR |
| 430 | 440 | 450 | 460 | 470 | 480 |
| AEIARVMNAA | GRRRDALPPD | IQNGLDLGLV | SPEVLQNLFD | LEQYPLISEL | TQRFQGFRER |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LLADPKFLNR | LAIEEAISIT | TTLIAQYEKR | KENFFEEIDY | VITDTVRGSV | VDFFTVWLPA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| PTLSFLSYAD | ETTGPDSIDA | LRGLLGSIPD | NAFQKSLAGR | EWNLNLRIAS | VIVGGLKLAG |
| 610 | 620 | 630 | 640 | 650 | 660 |
| VGVVSSFAAV | GASNALNIAR | KVIKPELVVA | EKPKRSPLLK | TAMVYGGFLG | TSANLRYQII |
| 670 | 680 | 690 | 700 | 710 | 720 |
| AGLIEHRLSD | ELSSQPLLVN | AISFVVRTLN | SYFGTQQWID | LARSTGLQTQ | KSIPASKEIS |
| 730 | 740 | ||||
| EALEEPTVEC | DTTTEEESID | KLNNQ |