Q8N0W3
Gene name |
FCSK |
Protein name |
L-fucose kinase |
Names |
Fucokinase |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:197258 |
EC number |
2.7.1.52: Phosphotransferases with an alcohol group as acceptor |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8N0W3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8N0W3-F1 | Predicted | AlphaFoldDB |
1041 variants for Q8N0W3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
VAR_081646 RCV000757948 CA8143045 rs769009456 |
223 | S>P | Congenital disorder of glycosylation with defective fucosylation 2 CDGF2; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
CA8143454 rs201433219 RCV001332944 |
652 | A>V | Congenital disorder of glycosylation with defective fucosylation 2 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs755169246 RCV002234120 RCV000757949 CA8143480 VAR_081647 |
683 | R>C | Congenital disorder of glycosylation with defective fucosylation 2 CDGF2; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
CA396572736 rs1223202082 RCV001332945 |
729 | Y>C | Congenital disorder of glycosylation with defective fucosylation 2 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs562205568 RCV001332946 CA8143525 COSM1128893 |
741 | R>* | prostate Congenital disorder of glycosylation with defective fucosylation 2 [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs199515460 RCV000757950 VAR_081648 CA8143836 |
994 | K>Q | Congenital disorder of glycosylation with defective fucosylation 2 CDGF2; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1040737872 CA283459340 |
2 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA8142690 rs201790833 |
3 | Q>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8142691 rs769711844 |
4 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1225096086 CA396558260 |
7 | V>I | No |
ClinGen gnomAD |
|
|
rs1267249189 CA396558316 |
10 | T>A | No |
ClinGen gnomAD |
|
| TCGA novel | 11 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8142693 rs748197913 |
12 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396558343 rs1567695791 |
12 | I>M | No |
ClinGen Ensembl |
|
|
CA283459372 rs748197913 |
12 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8142695 rs772245753 |
13 | I>F | No |
ClinGen ExAC |
|
|
rs772245753 CA8142694 |
13 | I>L | No |
ClinGen ExAC |
|
|
CA8142696 rs760937384 |
13 | I>T | No |
ClinGen ExAC |
|
|
rs765694378 CA8142700 |
15 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs201727216 CA8142699 |
15 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA8142701 rs753175029 |
17 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763503298 CA8142702 |
18 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA396558454 rs751100550 |
20 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA283459428 rs1025680440 |
21 | S>T | No |
ClinGen Ensembl |
|
|
CA8142705 rs756863195 |
22 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA8142706 rs780717198 |
23 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs750181274 CA8142707 |
23 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1328186441 CA396558480 |
24 | V>F | No |
ClinGen gnomAD |
|
|
rs755890429 CA8142708 |
24 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA8142709 rs780033403 |
25 | F>V | No |
ClinGen ExAC gnomAD |
|
|
CA283459470 rs1005705961 |
27 | R>K | No |
ClinGen Ensembl |
|
| TCGA novel | 29 | L>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1419898570 CA396558532 |
30 | E>Q | No |
ClinGen gnomAD |
|
|
rs140143924 CA8142730 |
31 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs747072933 CA8142732 |
32 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1649278 COSM558738 rs779016102 CA8142731 |
32 | R>W | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA8142733 rs757254446 |
34 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA283459823 rs888513535 |
35 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA8142734 rs781385329 |
35 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8142735 rs746067626 |
36 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA8142736 rs770073301 |
37 | Q>* | No |
ClinGen ExAC |
|
|
CA396558604 rs1401005849 |
37 | Q>H | No |
ClinGen gnomAD |
|
|
rs775768249 CA8142737 |
39 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs569139301 CA8142740 |
42 | T>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
COSM1379298 CA8142739 rs569139301 |
42 | T>M | large_intestine Variant assessed as Somatic; 9.278e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA396558676 rs1301381264 |
43 | L>P | No |
ClinGen TOPMed |
|
| TCGA novel | 46 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1597608720 CA396558726 |
47 | V>G | No |
ClinGen Ensembl |
|
|
CA8142744 rs760399324 |
47 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs550622605 CA283459913 |
48 | E>V | No |
ClinGen Ensembl |
|
|
rs766134440 CA8142745 |
49 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs371950142 CA8142746 |
51 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1249940928 CA396558789 |
52 | K>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs754851794 CA8142747 |
52 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA396558804 rs1181206449 |
53 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs369355398 CA8142750 |
53 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8142749 rs369355398 |
53 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8142751 rs369355398 |
53 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs866811411 CA283459932 |
55 | G>D | No |
ClinGen Ensembl |
|
|
CA283459938 COSM1479052 rs201023038 |
56 | S>R | breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC gnomAD |
|
CA8142755 rs373425489 CA8142754 |
57 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8142756 rs768975149 |
60 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1427882811 CA396558899 |
61 | L>V | No |
ClinGen TOPMed |
|
|
rs200603725 CA8142759 |
63 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1218004111 CA396558957 |
66 | V>L | No |
ClinGen gnomAD |
|
|
CA8142763 rs776392728 |
67 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA8142764 rs759313314 |
68 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA8142765 rs764931038 |
73 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs558228101 CA8142767 |
74 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs533929498 CA8142766 |
74 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8142768 rs369275877 |
75 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA283459972 rs377727682 |
76 | G>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA283460957 rs1028242891 |
80 | V>I | No |
ClinGen gnomAD |
|
|
CA8142811 rs374955788 |
81 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1280152476 CA396560591 |
82 | S>Y | No |
ClinGen gnomAD |
|
|
CA396560598 rs1208947667 |
83 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs749585090 CA283460965 |
84 | V>I | No |
ClinGen Ensembl |
|
|
CA396560612 rs1484231360 |
85 | L>V | No |
ClinGen gnomAD |
|
|
rs569060403 CA8142814 |
87 | S>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs757784768 CA8142816 |
88 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1461408463 CA396560629 |
88 | A>S | No |
ClinGen TOPMed |
|
|
rs1174343988 CA396560642 |
89 | W>C | No |
ClinGen gnomAD |
|
|
CA396560704 rs1171393597 |
94 | H>P | No |
ClinGen gnomAD |
|
|
rs781771130 CA8142817 |
94 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA8142819 rs373616691 |
95 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs745326523 CA8142818 |
95 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs771833222 CA8142843 |
96 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA8142844 rs772939990 |
97 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs772939990 CA396561457 |
97 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1288279655 CA396561461 |
97 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA8142845 rs746962657 |
98 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA396561505 rs1193929656 |
100 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 103 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA283461766 rs773180754 |
105 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs775584717 CA8142848 |
107 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775584717 CA8142847 |
107 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 107 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs775584717 CA396561652 |
107 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774687912 CA8142850 |
109 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA396561677 rs1597613360 |
109 | T>P | No |
ClinGen Ensembl |
|
|
rs1270551958 CA396561697 |
110 | C>S | No |
ClinGen TOPMed |
|
|
rs1388434440 CA396561709 |
111 | L>F | No |
ClinGen gnomAD |
|
|
rs140084649 CA8142852 |
112 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs376281623 CA8142854 |
113 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8142855 rs766808145 |
116 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1432345682 CA396561804 |
116 | P>S | No |
ClinGen gnomAD |
|
|
rs199882992 CA8142857 |
117 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs377358528 CA8142858 |
118 | A>G | No |
ClinGen ESP ExAC TOPMed |
|
|
rs1199820250 CA396561845 |
118 | A>S | No |
ClinGen TOPMed |
|
|
rs377358528 CA283461833 |
118 | A>V | No |
ClinGen ESP ExAC TOPMed |
|
|
CA396561861 rs1282813229 |
119 | P>A | No |
ClinGen gnomAD |
|
|
CA283461836 rs759536913 |
119 | P>L | No |
ClinGen Ensembl |
|
|
rs758111686 CA8142860 |
120 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1273827513 CA396561931 |
122 | A>D | No |
ClinGen TOPMed |
|
| TCGA novel | 125 | C>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8142863 rs374611522 |
125 | C>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8142865 rs376941268 |
127 | L>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs745836357 CA8142866 |
127 | L>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 129 | C>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA396562121 rs1414170836 |
131 | L>M | No |
ClinGen gnomAD |
|
|
rs990963388 CA283461925 |
131 | L>P | No |
ClinGen TOPMed |
|
|
CA396562154 rs772191361 |
132 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs543223292 COSM1252869 CA8142869 |
132 | D>H | oesophagus [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
| TCGA novel | 134 | M>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1402424797 CA396562226 |
135 | T>N | No |
ClinGen gnomAD |
|
|
rs1397394931 CA396562253 |
136 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8142871 rs773568960 |
137 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs947283993 COSM3771997 COSM3771998 CA283461954 |
137 | R>W | pancreas [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA396562406 rs1369068308 |
138 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA396562408 rs1369068308 |
138 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
rs780164688 CA8142905 |
140 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396562432 rs1385084700 |
142 | S>F | No |
ClinGen gnomAD |
|
| TCGA novel | 142 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8142907 rs572099494 |
143 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs916588858 CA283462430 |
144 | P>L | No |
ClinGen TOPMed |
|
|
CA8142909 rs747191892 |
144 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA8142912 rs17881323 |
146 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs17881323 COSM1493754 VAR_021327 CA8142911 |
146 | V>M | kidney [Cosmic] | No |
ClinGen cosmic curated UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
| TCGA novel | 149 | C>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8142914 rs775941861 |
150 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs763561603 CA8142915 |
150 | S>I | No |
ClinGen ExAC gnomAD |
|
|
CA8142917 rs773981829 |
152 | D>N | Variant assessed as Somatic; 4.677e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8142919 rs144507237 |
153 | M>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA396562541 rs144507237 |
153 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA283462528 rs1047711227 |
154 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA396562609 rs1597614908 |
157 | V>I | No |
ClinGen Ensembl |
|
|
rs750196894 CA8142920 |
158 | P>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 161 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs376683810 CA396562842 |
162 | G>A | No |
ClinGen ESP ExAC gnomAD |
|
|
rs376683810 CA8142963 |
162 | G>D | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1423831477 CA396562860 |
163 | I>T | No |
ClinGen TOPMed |
|
|
rs1406342508 CA396562850 |
163 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA396562909 rs1436522908 |
165 | W>* | No |
ClinGen gnomAD |
|
|
CA396562938 rs1276128839 |
166 | D>G | No |
ClinGen gnomAD |
|
|
rs756276274 CA8142965 |
167 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754115396 CA8142967 |
169 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370681598 CA8142966 |
169 | R>W | Variant assessed as Somatic; 9.777e-05 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8142968 rs372937279 |
172 | R>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA396563070 rs1245032225 |
173 | V>A | No |
ClinGen gnomAD |
|
|
rs748651971 CA8142970 |
174 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396563108 rs1451025311 |
175 | A>D | No |
ClinGen gnomAD |
|
|
CA8142972 rs777359819 |
175 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA396563113 rs1451025311 |
175 | A>V | No |
ClinGen gnomAD |
|
|
CA8142973 rs746540218 |
176 | L>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 177 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs770665685 CA8142974 |
178 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA396563154 rs1325487480 |
178 | G>R | No |
ClinGen gnomAD |
|
|
CA8142975 rs546740302 |
180 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA396563266 rs1270007044 |
182 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1230497232 CA396563276 |
183 | A>T | No |
ClinGen gnomAD |
|
|
CA396563296 rs1227716442 |
183 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA396563303 rs1288433377 |
184 | Q>K | No |
ClinGen gnomAD |
|
|
CA8142979 rs762807369 |
184 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396563348 rs952069585 |
185 | N>I | No |
ClinGen TOPMed gnomAD |
|
|
CA283462967 rs952069585 |
185 | N>T | No |
ClinGen TOPMed gnomAD |
|
|
CA8142981 rs773231437 |
186 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA8142980 rs532510018 |
186 | H>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA396563389 rs1372252645 |
187 | G>D | No |
ClinGen gnomAD |
|
|
CA8142983 rs373589147 |
188 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 193 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs765399888 CA8143004 |
195 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA396564315 rs1410942484 |
196 | L>I | No |
ClinGen gnomAD |
|
|
rs758802498 CA8143007 |
198 | L>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 199 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777293179 CA396564342 |
200 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756967589 CA396564344 |
200 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756967589 CA8143010 |
200 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777293179 CA8143009 |
200 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143011 rs200069143 |
201 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs745379846 CA8143013 |
205 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs779717861 CA8143015 |
207 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1290599760 CA396564398 |
207 | A>V | No |
ClinGen gnomAD |
|
|
CA8143016 rs748982064 |
209 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs530063842 COSM1207646 CA8143018 |
211 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA8143017 rs768420891 |
211 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1597617362 CA396564485 |
212 | C>* | No |
ClinGen Ensembl |
|
|
rs965344899 CA396564574 |
216 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA8143020 rs771909367 |
216 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs371682423 CA283465705 |
218 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA283465711 rs374822385 |
218 | R>Q | No |
ClinGen ESP gnomAD |
|
|
CA8143021 rs371682423 |
218 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA396564632 rs1597617433 |
219 | V>G | No |
ClinGen Ensembl |
|
|
CA8143023 rs770031280 |
219 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA283465727 rs915580422 |
220 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1428363292 CA396564921 |
224 | G>E | No |
ClinGen gnomAD |
|
|
CA8143049 rs762120135 |
227 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA283466462 rs1042690143 |
227 | F>V | No |
ClinGen Ensembl |
|
| rs752810500 | 228 | F>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA396564991 rs1473485582 |
228 | F>L | No |
ClinGen gnomAD |
|
|
CA8143050 rs201690930 |
228 | F>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs936648067 CA283466492 |
229 | S>P | No |
ClinGen gnomAD |
|
|
CA8143051 rs375974483 |
230 | V>M | No |
ClinGen ESP ExAC gnomAD |
|
|
CA283466521 rs922402763 |
232 | T>N | No |
ClinGen TOPMed |
|
|
rs1336895337 CA396565063 |
233 | A>T | No |
ClinGen gnomAD |
|
|
CA396565087 rs1193342255 |
234 | E>K | No |
ClinGen TOPMed |
|
|
CA8143056 rs754568782 |
235 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143057 rs200717651 COSM973016 |
235 | R>H | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs752432786 CA8143058 |
236 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA396565171 rs1446338379 |
238 | A>P | No |
ClinGen Ensembl |
|
|
CA8143060 rs777681547 |
238 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1597619464 CA396565184 |
239 | T>P | No |
ClinGen Ensembl |
|
|
rs780223326 CA8143063 |
240 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1402578465 CA396565231 |
241 | V>M | No |
ClinGen gnomAD |
|
|
CA8143064 rs749398861 |
242 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA8143065 rs779973404 |
243 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143066 rs774408221 |
244 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA8143068 rs748456022 |
247 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1014314551 CA283466652 |
248 | C>Y | No |
ClinGen TOPMed |
|
|
rs1283876495 CA396565461 |
252 | G>S | No |
ClinGen gnomAD |
|
|
CA283466659 rs970210928 |
254 | D>G | No |
ClinGen TOPMed |
|
|
rs1225643670 CA396565550 |
255 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs200140905 CA8143073 CA8143074 |
256 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs377726598 CA8143076 |
258 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143075 rs574933156 |
258 | R>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs370987850 CA8143077 |
259 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1328658723 CA396565719 |
262 | L>P | No |
ClinGen TOPMed |
|
|
rs764647820 CA8143093 |
263 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764647820 CA396565725 |
263 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396565722 rs1597620124 |
263 | S>P | No |
ClinGen Ensembl |
|
|
CA396565744 rs1183807010 |
266 | F>C | No |
ClinGen TOPMed gnomAD |
|
|
rs763826695 CA8143097 |
272 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA396565786 rs1189510977 |
272 | M>L | No |
ClinGen gnomAD |
|
|
rs113497209 CA8143098 |
275 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs767472330 CA8143100 |
276 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8143101 rs750376944 |
278 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396565870 rs1476122686 |
278 | R>T | No |
ClinGen TOPMed |
|
|
CA8143102 rs756191118 |
280 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA283466889 rs936604155 |
281 | F>S | No |
ClinGen Ensembl |
|
|
rs778792213 CA8143103 |
282 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1391710273 CA396565942 |
284 | G>W | No |
ClinGen gnomAD |
|
|
rs569060289 CA283466892 |
285 | R>K | No |
ClinGen 1000Genomes gnomAD |
|
|
CA396565961 rs1254708702 |
285 | R>S | No |
ClinGen TOPMed |
|
|
rs199957411 CA8143105 |
287 | P>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 288 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 288 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747278989 CA8143108 |
290 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs778089333 CA8143107 |
290 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396566039 rs1235166047 |
291 | Q>R | No |
ClinGen gnomAD |
|
|
CA396566052 rs1271330141 |
292 | G>D | No |
ClinGen gnomAD |
|
|
CA396566059 rs1567701957 |
293 | D>N | No |
ClinGen Ensembl |
|
|
CA8143110 rs781604512 |
293 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746306484 CA8143111 |
294 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA283466944 rs774105475 |
295 | D>A | No |
ClinGen TOPMed |
|
|
CA283466945 rs774105475 |
295 | D>G | No |
ClinGen TOPMed |
|
|
rs371768148 CA8143113 |
296 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200931948 CA8143114 |
297 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1015716972 CA396566145 |
299 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA283466956 rs1015716972 |
299 | Y>F | No |
ClinGen TOPMed gnomAD |
|
|
rs149553279 CA8143117 |
303 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs149553279 CA8143118 |
303 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8143119 rs371944586 |
304 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375086164 CA8143121 |
304 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143120 rs371944586 |
304 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM973017 rs1350324912 CA396566211 |
305 | A>T | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1246277234 CA396566219 |
305 | A>V | No |
ClinGen TOPMed |
|
|
rs533546546 CA8143123 |
306 | Q>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1292054903 CA396566228 |
306 | Q>R | No |
ClinGen gnomAD |
|
|
rs369289613 CA283466993 |
307 | L>Q | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs757475030 CA396566273 |
309 | R>M | No |
ClinGen ExAC gnomAD |
|
|
rs757475030 CA8143126 |
309 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA283466998 rs1005810422 |
310 | E>A | No |
ClinGen Ensembl |
|
|
rs1005810422 CA396566287 |
310 | E>G | No |
ClinGen Ensembl |
|
|
CA8143127 rs781473969 |
312 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396566309 rs1485913913 |
312 | R>H | No |
ClinGen gnomAD |
|
|
CA396566313 rs1485913913 |
312 | R>L | No |
ClinGen gnomAD |
|
|
rs1235412571 CA396566320 |
313 | D>G | No |
ClinGen TOPMed |
|
|
CA8143129 rs372969081 |
313 | D>N | No |
ClinGen ESP ExAC TOPMed |
|
|
rs1567702199 CA396566341 |
314 | Q>H | No |
ClinGen Ensembl |
|
|
rs377164688 CA8143130 |
317 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs768201316 CA8143132 |
318 | M>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8143131 rs749811306 |
318 | M>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 318 | M>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1365135744 CA396566401 |
318 | M>V | No |
ClinGen gnomAD |
|
|
rs1376442395 CA396566431 |
319 | A>T | No |
ClinGen gnomAD |
|
|
CA8143149 rs749801352 |
320 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396567185 rs1197491650 |
320 | Y>H | No |
ClinGen gnomAD |
|
|
CA8143151 rs377735594 |
321 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1597622621 CA396567209 |
322 | S>P | No |
ClinGen Ensembl |
|
|
CA396567227 rs1199912531 |
323 | S>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1429542245 CA396567229 |
323 | S>R | No |
ClinGen gnomAD |
|
|
rs771810521 CA8143153 COSM344460 |
324 | G>S | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs772970127 CA8143154 |
325 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA396567269 rs1319863328 |
326 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA8143155 rs746691145 |
327 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA283467621 rs909172317 |
327 | S>T | No |
ClinGen TOPMed |
|
|
rs1597622700 CA396567317 |
330 | T>P | No |
ClinGen Ensembl |
|
|
rs776294750 CA8143158 |
332 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA8143159 rs574604737 |
333 | A>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs574604737 CA8143160 |
333 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8143161 rs774371800 |
335 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA8143162 rs761847386 |
338 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1324636951 CA396567425 |
338 | L>P | No |
ClinGen gnomAD |
|
|
rs933477758 CA283467671 |
341 | T>I | No |
ClinGen TOPMed |
|
|
CA283467672 rs754001619 |
342 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1336394107 CA396567491 |
343 | P>L | No |
ClinGen gnomAD |
|
|
CA8143167 rs754172439 |
344 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1486360353 CA396567507 |
345 | A>T | No |
ClinGen gnomAD |
|
|
rs779595508 CA8143170 |
348 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs371159895 CA8143169 |
348 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143172 rs757962517 |
350 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396567603 rs1287114256 |
350 | I>V | No |
ClinGen TOPMed |
|
|
rs374104133 CA8143174 |
351 | V>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143173 rs371114615 |
351 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA396567630 rs770503000 |
352 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770503000 CA8143175 |
352 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1357274118 CA396567628 |
352 | H>Y | No |
ClinGen TOPMed |
|
|
CA8143179 rs559963930 |
353 | S>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs559963930 CA396567648 |
353 | S>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8143177 rs745677616 |
353 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA8143178 rs559963930 |
353 | S>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs962746854 CA283467728 |
354 | Q>* | No |
ClinGen Ensembl |
|
|
rs762932878 CA8143180 |
354 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762932878 CA396567654 |
354 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1306039095 CA396567733 |
357 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
rs200396056 CA8143211 |
357 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs756696445 CA8143212 |
358 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA396567750 rs1274338265 |
358 | Q>L | No |
ClinGen gnomAD |
|
|
CA396567770 rs1309261203 |
359 | Q>H | No |
ClinGen gnomAD |
|
|
CA8143214 rs750069837 |
362 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396567807 rs1195778545 |
363 | A>T | No |
ClinGen gnomAD |
|
|
rs1008738553 CA283468220 |
364 | G>R | No |
ClinGen gnomAD |
|
|
CA396567846 rs1357592599 COSM1379302 |
366 | S>F | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA8143217 rs766132079 CA283468226 |
367 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA396567875 rs1167887478 |
369 | S>N | No |
ClinGen gnomAD |
|
|
CA396567911 rs1461632469 |
372 | L>V | No |
ClinGen gnomAD |
|
|
CA396567931 rs375278651 |
373 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA396567941 rs1329653055 |
374 | G>V | No |
ClinGen gnomAD |
|
|
CA8143219 rs200044033 |
375 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1364726851 CA396567959 |
377 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1324343235 CA396567964 |
378 | L>V | No |
ClinGen TOPMed |
|
|
CA8143221 rs770903882 |
379 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1386847399 CA396567974 |
380 | P>A | No |
ClinGen TOPMed |
|
|
CA396567978 rs1364822947 |
380 | P>L | No |
ClinGen TOPMed |
|
|
rs1161653275 CA396567990 |
382 | S>N | No |
ClinGen TOPMed |
|
|
CA396567992 rs776919847 |
382 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM558735 rs376461962 COSM1649274 CA8143223 |
383 | V>I | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1449592189 CA396568002 |
384 | L>P | No |
ClinGen gnomAD |
|
|
CA396568022 rs1197948013 |
387 | C>Y | No |
ClinGen gnomAD |
|
|
CA396568029 rs1476331443 |
388 | H>Y | No |
ClinGen gnomAD |
|
|
CA396568038 rs1597624412 |
389 | L>P | No |
ClinGen Ensembl |
|
|
rs775828834 CA8143243 |
391 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA8143245 rs200941250 |
392 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143244 rs749579594 |
392 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201944437 CA8143246 |
394 | H>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1158446720 CA396568149 |
395 | I>M | No |
ClinGen gnomAD |
|
|
rs1396121180 CA396568159 |
396 | G>D | No |
ClinGen gnomAD |
|
|
rs865898085 CA283468464 |
397 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA283468480 rs370125817 |
398 | G>A | No |
ClinGen ESP ExAC gnomAD |
|
|
rs370125817 CA8143250 |
398 | G>D | No |
ClinGen ESP ExAC gnomAD |
|
|
rs991278723 CA283468487 |
401 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA396568274 rs765927488 |
404 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396568285 rs1308220730 |
405 | D>N | No |
ClinGen gnomAD |
|
|
rs1308220730 CA396568290 |
405 | D>Y | No |
ClinGen gnomAD |
|
|
rs753480033 CA8143252 |
406 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA283468504 rs1008269710 |
408 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA283468506 rs1053596033 |
409 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs754729649 CA8143253 |
410 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1343588934 CA396568387 |
411 | A>G | No |
ClinGen gnomAD |
|
|
CA396568380 rs1254192104 |
411 | A>T | No |
ClinGen gnomAD |
|
|
rs147558449 CA8143256 |
415 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs374640774 CA8143255 |
415 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA396568466 rs1254003563 |
417 | L>M | No |
ClinGen gnomAD |
|
|
rs752659322 CA8143258 |
418 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143259 rs140338721 |
418 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs780346716 CA8143260 |
421 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA283468555 rs929262277 |
423 | Q>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1371389926 CA396568727 |
427 | T>A | No |
ClinGen gnomAD |
|
|
CA8143262 rs376353924 |
427 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs376353924 CA8143263 |
427 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1035978768 CA283468563 |
428 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA8143265 rs551642065 |
428 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1306166337 CA396568769 |
429 | L>I | No |
ClinGen TOPMed |
|
|
CA396568778 rs1259399025 |
429 | L>P | No |
ClinGen gnomAD |
|
|
CA8143266 rs368134831 |
430 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs991860777 CA283468615 |
431 | G>S | No |
ClinGen gnomAD |
|
|
rs1197549366 CA396568847 |
432 | S>F | No |
ClinGen gnomAD |
|
|
rs201478159 CA8143269 |
433 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201478159 CA396568861 |
433 | P>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1208465575 CA396568871 |
434 | G>S | No |
ClinGen gnomAD |
|
|
CA8143271 rs368973788 |
436 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143272 rs368973788 |
436 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1429607585 CA396568967 |
438 | T>A | No |
ClinGen gnomAD |
|
|
CA396568977 rs1196028945 |
438 | T>N | No |
ClinGen gnomAD |
|
|
CA8143273 rs373219795 |
439 | L>H | No |
ClinGen ESP ExAC gnomAD |
|
|
rs764037766 CA8143276 |
440 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764037766 CA396569022 |
440 | V>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756236846 CA283468662 |
440 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756236846 CA8143275 |
440 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396569035 rs1459212118 |
441 | G>C | No |
ClinGen gnomAD |
|
|
rs751536679 CA8143277 |
442 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs377241951 CA8143279 |
442 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8143278 rs377241951 |
442 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA396569107 rs1597625214 |
444 | D>H | No |
ClinGen Ensembl |
|
|
CA396569143 rs1337696598 |
445 | S>G | No |
ClinGen gnomAD |
|
|
CA8143280 rs753975535 |
445 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA396569156 rs1293488325 |
445 | S>R | No |
ClinGen gnomAD |
|
|
rs1567705339 CA396569208 |
447 | E>A | No |
ClinGen Ensembl |
|
|
rs755116151 CA8143281 |
447 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA8143297 rs767523836 |
448 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767523836 CA396569874 |
448 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1034719495 CA8143299 |
449 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
rs544216689 CA283469863 |
451 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA396569892 rs1393851258 |
451 | A>P | No |
ClinGen TOPMed |
|
|
CA396569891 rs1393851258 |
451 | A>T | No |
ClinGen TOPMed |
|
|
rs544216689 CA8143302 |
451 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs778922748 CA8143303 |
452 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs917312399 CA283469883 |
454 | Y>H | No |
ClinGen Ensembl |
|
|
CA396569913 rs1209549223 |
455 | L>I | No |
ClinGen gnomAD |
|
|
CA8143305 rs372933428 |
456 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8143307 rs375968247 |
457 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8143309 rs781705874 |
459 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143310 rs746415341 |
460 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA396569947 rs1186910563 |
460 | S>N | No |
ClinGen TOPMed |
|
|
CA8143311 rs769341860 |
462 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143312 rs774866946 |
468 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396570008 rs1400449965 |
469 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
rs200099381 CA8143313 |
469 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs771899970 CA8143337 |
470 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1190845201 CA396570034 |
471 | W>* | No |
ClinGen gnomAD |
|
|
rs935032892 CA283470411 |
472 | D>A | No |
ClinGen TOPMed gnomAD |
|
|
rs772891487 CA8143338 |
472 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143339 rs760605356 |
473 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1214199013 CA396570050 |
474 | W>* | No |
ClinGen TOPMed |
|
|
rs1351770586 CA396570053 |
474 | W>* | No |
ClinGen TOPMed |
|
|
rs1597628865 CA396570059 |
475 | D>A | No |
ClinGen Ensembl |
|
|
rs764212829 CA8143343 |
477 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs751772390 CA8143344 |
478 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143347 rs750773096 |
480 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA8143348 rs756602561 |
480 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143351 rs754522710 |
481 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143350 rs754447175 |
481 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1214436759 CA396570110 |
483 | Y>* | No |
ClinGen gnomAD |
|
|
CA396570106 rs1597628972 |
483 | Y>S | No |
ClinGen Ensembl |
|
|
CA396570112 rs1165104833 |
484 | C>R | No |
ClinGen TOPMed |
|
|
CA396570129 rs778633729 |
486 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA8143352 rs778633729 |
486 | P>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 487 | S>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA396570136 rs747773026 |
487 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143354 rs771639927 COSM1379304 |
488 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs777577639 CA8143355 |
489 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs1472651028 CA396570145 |
489 | R>H | No |
ClinGen gnomAD |
|
|
rs770806029 CA8143357 |
494 | L>P | No |
ClinGen ExAC |
|
|
rs1158640452 CA396570191 |
496 | P>L | No |
ClinGen gnomAD |
|
|
CA8143360 rs768652412 |
497 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759531686 CA8143359 |
497 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs1267430816 CA396570201 |
498 | R>K | No |
ClinGen TOPMed |
|
|
CA8143363 rs767661702 |
499 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1260089806 CA396570216 |
501 | G>R | No |
ClinGen gnomAD |
|
|
rs760928009 CA8143365 |
502 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143366 rs766908433 |
507 | W>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396570267 rs1240407487 |
508 | M>I | No |
ClinGen gnomAD |
|
|
CA8143367 rs754393801 |
509 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754393801 CA396570273 |
509 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396570271 rs1438224751 |
509 | L>V | No |
ClinGen gnomAD |
|
|
rs1479024029 CA396570289 |
511 | H>R | No |
ClinGen gnomAD |
|
|
rs1170875417 CA396570299 |
512 | Q>E | No |
ClinGen gnomAD |
|
|
CA396570347 rs1466336943 |
514 | D>G | No |
ClinGen gnomAD |
|
|
CA8143369 rs755550792 |
514 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143368 rs755550792 |
514 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1370123561 CA396570355 |
515 | G>R | No |
ClinGen TOPMed |
|
|
CA8143370 rs752172854 |
516 | G>S | No |
ClinGen ExAC TOPMed |
|
|
CA8143373 rs777266722 |
517 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs577792033 CA8143374 |
518 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8143376 rs546703026 |
520 | R>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs745746863 CA8143377 |
520 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143379 rs17881069 |
521 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8143378 rs17881069 VAR_021328 |
521 | A>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1168503640 CA396570453 |
521 | A>V | No |
ClinGen TOPMed |
|
|
rs772244985 CA8143381 |
523 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs369957269 CA8143380 |
523 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8143382 rs550917987 |
524 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA396570488 rs1268560067 |
525 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
rs372869435 CA8143383 |
526 | W>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA396570522 RCV001175523 rs1377077648 |
527 | R>C | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs569142534 CA8143384 |
527 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA396570518 rs1377077648 |
527 | R>S | No |
ClinGen gnomAD |
|
|
CA396570566 rs1421799342 |
530 | W>* | No |
ClinGen gnomAD |
|
|
CA283470721 rs375804257 |
532 | Q>* | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1314467028 CA396570638 |
534 | Q>R | No |
ClinGen TOPMed |
|
|
CA8143386 rs771865088 |
535 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1321510474 CA396570712 |
538 | D>E | No |
ClinGen gnomAD |
|
|
CA396570704 rs1388439969 |
538 | D>G | No |
ClinGen gnomAD |
|
|
CA396570699 rs1567707860 |
538 | D>Y | No |
ClinGen Ensembl |
|
|
rs753291011 CA8143389 |
539 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757830335 CA8143390 |
539 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA283470739 rs753291011 |
539 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143391 rs763725071 |
540 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA283470768 rs925684095 |
541 | A>D | No |
ClinGen Ensembl |
|
|
rs1290848920 CA396570735 |
541 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA396570751 rs1226315873 |
542 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs369940276 CA8143392 |
542 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1052172691 CA396570762 |
543 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
CA283470798 rs917782468 |
543 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA283470796 rs1052172691 |
543 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA8143396 rs745693760 |
546 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396570802 rs1195897844 |
546 | R>H | No |
ClinGen gnomAD |
|
|
rs779832150 CA283470829 |
547 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779832150 CA8143398 |
547 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143397 rs537379806 |
547 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1165835461 CA396570819 |
549 | L>R | No |
ClinGen gnomAD |
|
|
rs1045656743 CA283470848 |
550 | F>L | No |
ClinGen gnomAD |
|
|
rs868116498 CA283470849 |
552 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA396570835 rs868116498 |
552 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA8143399 rs749307081 |
552 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 553 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA396570850 rs772040460 |
554 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143400 rs772040460 |
554 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1337864398 CA396570859 |
556 | H>N | No |
ClinGen gnomAD |
|
|
CA8143401 rs773347744 |
556 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143402 rs549295250 |
557 | K>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA283470865 rs370085424 |
558 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA396570876 rs567507852 |
559 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1008064326 CA283470884 |
559 | R>Q | No |
ClinGen Ensembl |
|
|
rs567507852 CA8143404 |
559 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1257458163 CA396570881 |
560 | H>N | No |
ClinGen TOPMed |
|
|
CA396570886 rs759951573 |
560 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1219506548 CA396570887 |
561 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs764197033 CA283470905 |
565 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA283470895 rs997436548 |
565 | R>W | No |
ClinGen TOPMed |
|
|
rs1217820476 CA396570917 |
566 | Q>* | No |
ClinGen TOPMed |
|
|
CA396570921 rs1182606416 |
566 | Q>H | No |
ClinGen gnomAD |
|
|
rs577154807 CA283470926 |
568 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA283470929 rs534767610 |
568 | L>R | No |
ClinGen 1000Genomes |
|
|
rs1384430529 CA396570950 |
571 | R>C | No |
ClinGen gnomAD |
|
|
VAR_021329 CA8143406 rs17886171 |
571 | R>H | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA8143407 rs17886171 |
571 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8143408 rs763516720 |
572 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396570962 rs1303026164 |
574 | I>L | No |
ClinGen TOPMed gnomAD |
|
|
CA396570980 rs1380850849 |
576 | A>S | No |
ClinGen gnomAD |
|
|
CA8143410 rs201801842 |
579 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA396570997 rs201801842 |
579 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA283470952 rs538268173 |
579 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8143411 rs538268173 |
579 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8143412 rs377053920 |
580 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA283470968 rs377649302 |
583 | P>S | No |
ClinGen Ensembl |
|
|
rs926475956 CA396571026 |
584 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs755892030 CA283470974 |
584 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA283470988 rs926475956 |
584 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs755892030 CA8143414 |
584 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1237511751 CA396571049 |
588 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1440097783 CA396571052 |
589 | T>A | No |
ClinGen gnomAD |
|
|
rs1180383871 CA396571055 |
589 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1567708404 CA396571070 |
592 | Q>* | No |
ClinGen Ensembl |
|
|
CA283471007 rs915685571 |
593 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA283471596 rs1014951065 |
595 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1423930204 CA396571413 |
598 | G>V | No |
ClinGen gnomAD |
|
|
CA396571433 rs1354374812 |
601 | G>A | No |
ClinGen gnomAD |
|
|
rs771178511 CA8143421 |
601 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1210685679 CA396571438 |
602 | V>M | No |
ClinGen TOPMed |
|
|
rs369804910 CA283471625 |
603 | A>T | No |
ClinGen Ensembl |
|
|
rs776974813 CA8143422 |
603 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA283471666 rs906083281 |
604 | A>V | No |
ClinGen TOPMed |
|
|
rs554866648 CA8143425 |
605 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1201458635 CA396571473 |
605 | R>Q | No |
ClinGen gnomAD |
|
|
CA8143424 rs554866648 |
605 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1033270999 CA283471677 |
609 | C>G | No |
ClinGen TOPMed |
|
|
CA396571513 rs1397643689 |
609 | C>Y | No |
ClinGen TOPMed |
|
|
rs763316882 CA8143426 |
611 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 612 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8143429 rs370982504 |
613 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA283471705 rs1002569403 |
614 | L>V | No |
ClinGen TOPMed |
|
|
rs767071265 CA8143430 |
615 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA283471724 rs1026040391 |
616 | C>Y | No |
ClinGen Ensembl |
|
|
rs1306709064 CA396571613 |
617 | M>I | No |
ClinGen gnomAD |
|
|
CA283471726 rs950466690 |
617 | M>K | No |
ClinGen Ensembl |
|
|
rs1222138175 CA396571617 |
618 | A>T | No |
ClinGen gnomAD |
|
|
CA8143431 rs750073884 |
620 | G>D | No |
ClinGen ExAC |
|
|
rs1015414946 CA283471728 |
620 | G>S | No |
ClinGen TOPMed |
|
|
rs760324729 CA8143432 |
621 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200371638 CA8143433 |
621 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs760324729 CA283471741 |
621 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs186275161 CA8143435 |
625 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs753693664 CA8143434 |
625 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778880729 CA8143436 |
626 | S>G | No |
ClinGen ExAC |
|
|
rs1165858318 CA396571688 |
626 | S>N | No |
ClinGen gnomAD |
|
|
CA396571695 rs1167483737 |
627 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA8143438 rs757404478 |
627 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs373907136 CA396571707 |
629 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373907136 CA8143439 |
629 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1404933028 CA396571704 |
629 | A>T | No |
ClinGen gnomAD |
|
|
CA8143440 rs577363040 |
630 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs770074270 CA8143441 |
631 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs780240758 CA8143442 |
632 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA396571726 rs367795956 |
633 | E>K | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA283471802 rs367795956 |
633 | E>Q | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA396571738 rs1228704900 |
634 | W>* | No |
ClinGen gnomAD |
|
| TCGA novel | 634 | W>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749631498 CA8143443 |
635 | M>R | No |
ClinGen ExAC gnomAD |
|
|
rs774825353 CA8143445 |
636 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768950026 CA8143444 |
636 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396571758 rs1488993844 |
637 | P>L | No |
ClinGen gnomAD |
|
|
rs1286101096 CA396571753 |
637 | P>T | No |
ClinGen gnomAD |
|
|
CA396571781 rs1241194243 |
641 | L>M | No |
ClinGen gnomAD |
|
|
rs1292650243 CA396571784 |
641 | L>P | No |
ClinGen TOPMed |
|
|
CA8143447 rs771504232 |
643 | C>G | No |
ClinGen ExAC gnomAD |
|
|
rs936106517 CA283471841 |
643 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA396571807 rs1424581619 |
645 | D>H | No |
ClinGen gnomAD |
|
|
CA8143448 rs772723684 |
648 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA8143449 rs200436970 |
648 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8143452 COSM973018 rs200813651 |
650 | V>M | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs758419137 CA8143455 |
654 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758419137 CA396571859 |
654 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143456 rs781368790 |
654 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750558905 CA8143457 |
656 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8143458 rs190206934 |
657 | R>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA396571883 rs1194365274 |
657 | R>S | No |
ClinGen TOPMed |
|
|
CA396571889 rs1216944299 |
658 | D>E | No |
ClinGen gnomAD |
|
|
rs1211885446 CA396571884 |
658 | D>N | No |
ClinGen gnomAD |
|
|
rs771676730 CA283471917 |
658 | D>V | No |
ClinGen Ensembl |
|
| TCGA novel | 659 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs372943356 CA8143460 |
660 | W>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143459 rs780298579 |
660 | W>G | No |
ClinGen ExAC gnomAD |
|
|
rs948259856 CA283471950 |
663 | R>K | No |
ClinGen TOPMed |
|
|
CA396571946 rs1398449593 |
665 | A>D | No |
ClinGen gnomAD |
|
|
rs1398449593 CA396571948 |
665 | A>V | No |
ClinGen gnomAD |
|
|
rs759111569 CA8143471 |
666 | L>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396571959 rs1328117820 |
667 | L>R | No |
ClinGen gnomAD |
|
|
CA396571964 rs1597633184 |
668 | V>G | No |
ClinGen Ensembl |
|
|
CA396571961 CA8143472 rs765063375 |
668 | V>L | No |
ClinGen ExAC TOPMed |
|
|
CA8143473 rs376479038 |
669 | R>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8143474 rs762940591 |
669 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1280854985 CA396571968 |
670 | A>T | No |
ClinGen gnomAD |
|
|
CA8143475 rs764090742 |
670 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs35150055 CA8143476 |
672 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756205868 CA8143477 |
672 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs532170114 CA396571994 |
674 | Y>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8143478 rs532170114 |
674 | Y>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1597633264 CA396571993 |
674 | Y>H | No |
ClinGen Ensembl |
|
|
CA396572011 rs1180956205 |
676 | G>A | No |
ClinGen TOPMed |
|
|
rs754026874 CA8143479 |
676 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396572037 rs1268349279 |
679 | Q>* | No |
ClinGen gnomAD |
|
|
CA396572077 rs1478268716 |
681 | L>P | No |
ClinGen gnomAD |
|
|
CA8143481 rs377513686 |
683 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8143482 rs377513686 |
683 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143483 rs371154254 |
684 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143484 rs778233490 |
685 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1344394547 CA396572140 |
686 | V>A | No |
ClinGen gnomAD |
|
|
CA396572136 rs1300726337 |
686 | V>M | No |
ClinGen gnomAD |
|
|
rs747531326 CA8143485 |
687 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA396572171 rs1297292493 |
688 | S>L | No |
ClinGen gnomAD |
|
|
rs958312451 CA396572179 |
689 | A>D | No |
ClinGen gnomAD |
|
|
CA396572174 rs1329876832 |
689 | A>T | No |
ClinGen gnomAD |
|
|
rs958312451 CA283472265 |
689 | A>V | No |
ClinGen gnomAD |
|
|
CA8143487 rs375737602 |
690 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1567710105 CA396572207 |
691 | H>P | No |
ClinGen Ensembl |
|
|
CA396572261 rs1362204809 |
694 | S>F | No |
ClinGen gnomAD |
|
|
rs1220988666 CA396572297 |
696 | E>D | No |
ClinGen gnomAD |
|
|
rs1291051324 CA396572304 |
697 | Q>* | No |
ClinGen gnomAD |
|
|
CA8143490 rs775319717 |
697 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs1259949656 CA396572330 |
699 | E>K | No |
ClinGen gnomAD |
|
|
CA396572348 rs1428181215 |
700 | L>M | No |
ClinGen gnomAD |
|
|
rs1374448810 CA396572356 |
700 | L>R | No |
ClinGen TOPMed |
|
|
CA8143492 rs17883716 VAR_021330 |
701 | P>L | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs761660246 CA8143495 |
703 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA8143496 rs766424565 |
704 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1468526185 CA396572415 |
705 | Q>* | No |
ClinGen TOPMed |
|
|
CA396572417 rs1468526185 |
705 | Q>K | No |
ClinGen TOPMed |
|
|
CA396572422 rs1188353148 |
705 | Q>R | No |
ClinGen TOPMed |
|
|
rs1382299354 CA396572443 |
706 | W>* | No |
ClinGen gnomAD |
|
|
CA396572436 rs1567710268 |
706 | W>* | No |
ClinGen Ensembl |
|
|
CA396572454 rs1313878130 |
707 | V>A | No |
ClinGen gnomAD |
|
|
rs755154455 CA8143498 |
707 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1244349246 CA396572486 |
710 | E>K | No |
ClinGen gnomAD |
|
|
CA8143499 rs765330653 |
712 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752968614 CA8143500 |
713 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396572539 rs1208917929 |
713 | A>S | No |
ClinGen TOPMed |
|
|
CA8143501 rs758752837 |
714 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs551672930 CA8143502 |
714 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs374934502 CA8143504 |
717 | F>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA283472402 rs1006326414 |
718 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs759592967 CA8143515 |
719 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA283472462 rs765362360 |
720 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143516 rs765362360 |
720 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752915775 CA8143517 |
721 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs1430938973 CA396572682 |
721 | W>* | No |
ClinGen gnomAD |
|
|
rs1176140317 CA396572690 |
722 | S>N | No |
ClinGen gnomAD |
|
|
rs371830988 CA8143518 |
724 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA396572710 rs1296972152 |
725 | P>S | No |
ClinGen gnomAD |
|
|
rs1234370264 CA396572718 |
726 | P>L | No |
ClinGen TOPMed |
|
|
rs1387455904 CA396572722 |
727 | L>V | No |
ClinGen gnomAD |
|
|
rs1321659136 CA396572726 |
728 | A>T | No |
ClinGen gnomAD |
|
|
rs1597634294 CA396572733 |
729 | Y>H | No |
ClinGen Ensembl |
|
|
rs1262202973 CA396572740 |
730 | E>K | No |
ClinGen gnomAD |
|
|
CA396572751 rs1307872831 |
731 | L>R | No |
ClinGen gnomAD |
|
|
rs757677757 CA8143521 |
732 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA396572763 rs1199485591 |
733 | G>E | No |
ClinGen gnomAD |
|
|
CA8143523 rs372313872 |
733 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA396572764 rs1479247310 |
734 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs544431310 CA396572770 |
735 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8143524 rs544431310 |
735 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1412019501 CA396572783 |
737 | G>D | No |
ClinGen gnomAD |
|
|
CA396572780 rs1420594894 |
737 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA283472587 rs773216109 |
739 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA8143526 rs375377209 |
741 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1404504232 CA396572807 CA396572806 |
742 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA396572811 rs1279109615 |
743 | D>N | No |
ClinGen gnomAD |
|
|
rs969881282 CA283472627 |
744 | G>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 745 | R>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8143528 rs778729434 |
745 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200256917 CA8143529 |
745 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200256917 CA396572827 |
745 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1489644026 CA396572829 |
746 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs773011854 CA8143531 |
746 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143532 rs760676227 |
747 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1567710721 CA396572837 |
748 | I>V | No |
ClinGen Ensembl |
|
|
CA396572847 rs1419334362 |
749 | G>E | No |
ClinGen gnomAD |
|
|
CA396572844 rs1185118153 |
749 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA8143535 rs763117299 |
750 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1166032074 CA396572857 |
751 | R>K | No |
ClinGen gnomAD |
|
|
CA8143536 rs764189604 |
751 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1319116375 CA396572864 |
752 | A>G | No |
ClinGen gnomAD |
|
|
CA8143537 rs751854740 |
752 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA8143539 rs766513725 |
753 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1268190695 CA396572870 |
753 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA396572869 rs1268190695 |
753 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA8143540 rs750892267 |
754 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750892267 CA396572871 |
754 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs900208616 COSM1679236 COSM1679235 CA283472721 |
754 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA283472715 rs750892267 |
754 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396572875 rs1303494104 |
755 | I>V | No |
ClinGen TOPMed |
|
|
rs371988447 CA8143541 |
756 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8143542 rs371988447 |
756 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1246544934 CA396572882 |
756 | P>S | No |
ClinGen gnomAD |
|
|
CA8143544 rs754558003 |
758 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs778409956 CA8143545 |
759 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747895504 CA8143546 |
763 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA283472745 rs890284214 |
764 | V>M | No |
ClinGen gnomAD |
|
|
rs1251241580 CA396572943 |
766 | P>L | No |
ClinGen TOPMed |
|
|
CA283472761 rs933786785 |
766 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA8143549 COSM3691130 COSM194840 rs572464313 |
767 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA8143548 rs376138712 |
767 | R>W | No |
ClinGen ESP ExAC gnomAD |
|
|
rs776587078 CA8143551 |
768 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA8143552 rs369163057 |
768 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1597634927 CA396572957 |
769 | D>G | No |
ClinGen Ensembl |
|
|
rs34993175 CA283472795 |
769 | D>Y | No |
ClinGen Ensembl |
|
|
rs540532684 CA8143553 |
770 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs774430621 CA8143554 |
771 | M>V | No |
ClinGen ExAC gnomAD |
|
|
RCV000970018 rs149607813 CA8143555 |
772 | T>A | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs767714892 CA8143556 |
773 | V>E | No |
ClinGen ExAC |
|
|
rs773733415 CA8143557 |
774 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1283157337 CA396572997 |
775 | I>T | No |
ClinGen gnomAD |
|
|
CA396572994 rs1221669281 |
775 | I>V | No |
ClinGen gnomAD |
|
|
rs761223598 CA8143558 |
776 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA8143559 rs766961706 |
778 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143560 rs766961706 |
778 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201319740 CA283472896 |
778 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA396573027 rs1372597431 |
780 | L>R | No |
ClinGen TOPMed |
|
|
rs1234611844 CA396573024 |
780 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1430207985 CA396573033 |
781 | A>V | No |
ClinGen gnomAD |
|
|
CA8143562 CA396573040 rs764870652 |
782 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs199671104 CA8143563 |
783 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143566 rs368736266 |
784 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143565 rs368736266 |
784 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs758086643 CA8143564 |
784 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1434373473 CA396573051 |
785 | D>G | No |
ClinGen TOPMed |
|
|
CA396573047 rs1336975015 |
785 | D>N | No |
ClinGen gnomAD |
|
|
CA396573063 rs757089566 |
787 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA8143567 rs757089566 |
787 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA8143569 rs745882827 |
788 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143568 rs781092085 |
788 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1225041547 CA396573081 |
789 | P>L | No |
ClinGen gnomAD |
|
|
CA396573084 rs1161446980 |
790 | H>Y | No |
ClinGen TOPMed |
|
|
rs1020317390 CA283472944 |
792 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1202443806 CA396573099 |
792 | P>R | No |
ClinGen gnomAD |
|
|
rs768551060 CA8143570 CA8143571 |
793 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780967695 CA8143587 |
794 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396573125 rs780967695 |
794 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8143589 rs756099434 |
796 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1298180576 CA396573186 |
798 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA8143590 rs377203828 |
798 | A>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1298180576 CA396573187 |
798 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA396573201 rs1228250201 |
799 | A>V | No |
ClinGen gnomAD |
|
|
CA396573206 rs1316390988 |
800 | F>L | No |
ClinGen gnomAD |
|
|
CA8143592 rs772327700 |
801 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1461162346 CA396573261 |
803 | A>V | No |
ClinGen TOPMed |
|
|
CA396573270 rs1265000846 |
804 | G>E | No |
ClinGen gnomAD |
|
|
CA396573278 rs1486315306 |
805 | I>V | No |
ClinGen gnomAD |
|
|
rs1454295138 CA396573305 |
806 | V>A | No |
ClinGen TOPMed |
|
|
CA8143594 COSM1749740 COSM1749739 rs747304625 |
806 | V>M | urinary_tract Variant assessed as Somatic; 5.05e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA8143595 rs771358427 |
807 | H>P | No |
ClinGen ExAC gnomAD |
|
|
CA396573314 rs771358427 |
807 | H>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 808 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8143596 rs200793397 |
810 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA396573383 rs1161117073 |
812 | L>F | No |
ClinGen gnomAD |
|
|
rs962168640 CA283473365 |
813 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
rs370118908 CA8143597 |
816 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA396573459 rs1250952648 |
817 | Q>* | No |
ClinGen TOPMed |
|
|
CA8143598 rs770299466 |
818 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA8143599 rs374637768 |
820 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs762507843 CA8143600 |
820 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs762507843 CA396573506 |
820 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs751144364 CA8143602 |
823 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs1451186630 CA396573540 |
823 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1241387284 CA396573567 |
825 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA396573655 rs1328794238 |
830 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA396573651 rs1328794238 |
830 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA396573666 rs1207852586 |
831 | W>L | No |
ClinGen gnomAD |
|
|
rs1597636575 CA396573658 |
831 | W>R | No |
ClinGen Ensembl |
|
|
rs750263023 CA8143605 |
835 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA8143606 rs755902729 |
836 | H>P | No |
ClinGen ExAC gnomAD |
|
|
CA8143608 rs780019583 |
836 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143609 rs758549850 |
837 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143610 rs778007248 |
838 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA396573774 rs1409285525 |
839 | G>S | No |
ClinGen gnomAD |
|
|
rs781376107 CA8143613 |
841 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs547891392 CA8143637 |
843 | S>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1208307967 CA396573844 |
844 | S>N | No |
ClinGen TOPMed |
|
|
rs771494760 CA8143639 |
846 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1448769237 CA396573889 |
847 | A>G | No |
ClinGen TOPMed |
|
|
CA396573881 rs1190962092 |
847 | A>T | No |
ClinGen gnomAD |
|
|
rs1420747774 CA396573909 |
849 | T>A | No |
ClinGen gnomAD |
|
|
CA8143640 rs772853697 |
849 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA8143641 rs760309838 |
850 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396573996 rs1295493279 |
855 | Q>R | No |
ClinGen TOPMed |
|
|
rs766181080 CA8143642 |
856 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143643 rs776613442 |
856 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs776613442 CA396574007 |
856 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
RCV001175524 CA283473652 rs17884050 |
858 | A>S | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs17884050 CA8143645 VAR_021331 |
858 | A>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1436114191 CA396574042 |
859 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs757342983 CA8143647 |
860 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143646 rs752699428 |
860 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1597637376 CA396574071 |
861 | V>G | No |
ClinGen Ensembl |
|
|
rs17878599 VAR_021332 CA8143648 RCV000965332 |
861 | V>M | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA396574081 rs1246038089 |
862 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1246038089 CA396574084 |
862 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
CA8143649 rs750647637 |
862 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396574109 rs370391879 |
864 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143652 rs370391879 |
864 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143656 rs748657188 |
866 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748657188 CA8143655 |
866 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772654359 CA8143657 |
866 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143658 rs746649114 |
867 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA8143660 rs770527523 |
869 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396574190 rs1411726809 |
870 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs570409959 CA283473762 |
870 | A>V | No |
ClinGen 1000Genomes gnomAD |
|
|
CA396574211 rs1345529177 |
871 | V>A | No |
ClinGen gnomAD |
|
|
rs1318345244 CA396574222 |
872 | L>P | No |
ClinGen gnomAD |
|
|
CA8143663 rs775567216 |
873 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs762858394 CA8143664 COSM1749741 COSM1749742 |
875 | E>Q | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs767614228 CA8143665 |
878 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA283473773 rs767614228 |
878 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396574306 rs1284558096 |
879 | T>S | No |
ClinGen gnomAD |
|
|
CA8143666 rs750510416 |
880 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA8143667 rs750510416 |
880 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA8143695 rs778089170 |
882 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396574641 rs1334523968 |
883 | G>D | No |
ClinGen TOPMed |
|
|
CA396574647 rs1468419266 |
884 | W>* | No |
ClinGen TOPMed |
|
|
rs1387341851 CA396574655 |
885 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs563951519 CA8143697 |
886 | D>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs769612865 CA8143700 |
889 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs372403072 CA8143701 |
890 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143702 rs748988530 |
892 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs979713201 CA283477132 |
895 | I>V | No |
ClinGen TOPMed |
|
|
rs774089367 CA8143704 |
897 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA8143706 rs770983236 |
898 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA8143707 COSM3377947 COSM3377946 rs116501877 |
899 | R>C | pancreas [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs759721515 CA8143708 |
899 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765401214 CA396574746 |
900 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs765401214 CA8143709 |
900 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA8143711 rs201287158 |
901 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8143710 rs17881635 VAR_021333 |
901 | R>W | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA8143712 rs764590076 |
902 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143713 rs752000788 |
903 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs755709267 CA8143719 |
907 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779516540 CA8143720 |
908 | V>A | No |
ClinGen ExAC |
|
|
CA8143721 rs748975276 |
909 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1597642916 CA396574806 |
910 | V>G | No |
ClinGen Ensembl |
|
|
rs200944357 CA8143723 |
914 | T>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8143722 rs200944357 |
914 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 917 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1312850521 CA396574857 |
918 | G>D | No |
ClinGen TOPMed |
|
|
rs748011697 CA8143724 |
918 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1390418903 CA396574874 |
921 | Q>* | No |
ClinGen gnomAD |
|
|
rs199971372 CA8143725 |
922 | K>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8143726 rs773162023 |
924 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs369090482 CA8143727 |
924 | N>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369090482 CA8143728 |
924 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 925 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1400393938 CA396574912 |
926 | H>Q | No |
ClinGen TOPMed |
|
|
rs775505230 CA8143729 |
926 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA396574934 rs1265050219 |
930 | V>A | No |
ClinGen gnomAD |
|
|
CA8143730 rs763297173 |
930 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA396574937 rs1382838212 |
931 | Y>H | No |
ClinGen TOPMed |
|
|
rs532339080 CA283477367 |
932 | T>A | No |
ClinGen gnomAD |
|
|
CA396574963 rs1463440908 |
933 | G>V | No |
ClinGen gnomAD |
|
|
rs774821864 CA8143733 |
934 | K>M | No |
ClinGen ExAC gnomAD |
|
|
CA8143734 rs762300882 |
935 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA396574983 rs1597643099 |
935 | T>P | No |
ClinGen Ensembl |
|
|
CA8143735 rs200925079 |
936 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143736 rs199722781 |
936 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs199722781 CA283477404 |
936 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1476568804 CA396575011 |
937 | L>R | No |
ClinGen TOPMed |
|
|
rs17886060 VAR_021334 CA8143738 |
939 | R>Q | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
VAR_021335 rs17883248 CA8143737 |
939 | R>W | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA396575057 rs1457130070 |
941 | L>V | No |
ClinGen gnomAD |
|
|
CA283477551 rs1049651995 |
945 | V>M | No |
ClinGen gnomAD |
|
|
rs1249132352 CA396575192 |
948 | S>N | No |
ClinGen gnomAD |
|
|
rs1482555569 CA396575219 |
951 | A>G | No |
ClinGen gnomAD |
|
|
CA396575221 rs1192132355 |
952 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
rs777607374 CA8143764 |
952 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143763 rs777607374 |
952 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1325425457 CA396575224 |
953 | L>F | No |
ClinGen TOPMed |
|
|
rs545722467 CA8143765 |
954 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8143766 rs781025611 |
955 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1405837714 CA396575240 |
956 | V>L | No |
ClinGen TOPMed |
|
|
CA396575249 rs768633106 |
957 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143768 rs768633106 |
957 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143769 rs557189476 |
958 | Q>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs557189476 CA396575251 |
958 | Q>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs748449383 CA8143770 |
958 | Q>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 959 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1444974923 CA396575274 |
961 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA396575279 rs1293830589 |
962 | S>G | No |
ClinGen gnomAD |
|
|
rs74613280 CA8143771 |
962 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA396575296 rs528370718 |
965 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143773 rs761231496 |
965 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761231496 CA8143774 |
965 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs528370718 CA8143772 |
965 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8143775 rs777023613 |
966 | Q>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 966 | Q>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759026993 CA8143776 |
967 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs75025318 CA283477635 |
968 | E>K | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs75025318 CA283477636 |
968 | E>Q | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA8143778 rs752339016 |
969 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA8143777 rs764653879 |
969 | E>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 971 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1248774675 CA396575340 |
972 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1248774675 CA396575339 |
972 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA396575348 rs762646193 |
973 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA396575344 rs1178486738 |
973 | G>S | No |
ClinGen TOPMed |
|
|
CA8143779 rs762646193 |
973 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA8143780 COSM973019 rs762425961 |
975 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs528834068 CA8143781 |
975 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1396906114 CA396575371 |
977 | G>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1270542475 CA396575403 |
980 | P>R | No |
ClinGen gnomAD |
|
|
CA396575415 rs1308172389 |
983 | G>S | No |
ClinGen gnomAD |
|
|
rs1372014990 CA396575420 |
983 | G>V | No |
ClinGen gnomAD |
|
|
COSM1238947 CA8143828 rs371789974 |
985 | C>Y | oesophagus [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA8143829 rs764333932 |
987 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs540730922 CA8143831 |
988 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs1387232001 CA396575457 |
989 | Y>* | No |
ClinGen TOPMed |
|
|
CA396575452 rs1255041654 |
989 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1159277280 CA396575468 |
991 | E>K | No |
ClinGen TOPMed |
|
|
rs181800639 CA8143834 |
992 | Q>* | No |
ClinGen 1000Genomes ESP TOPMed gnomAD |
|
| TCGA novel | 993 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs199515460 CA8143837 |
994 | K>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8143838 rs186359879 |
996 | M>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs768143099 CA8143839 |
998 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs768143099 CA396575518 |
998 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA8143840 rs778338144 |
1000 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1476489417 CA396575535 |
1001 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs371645894 CA8143842 |
1005 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371645894 CA283478446 |
1005 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377157126 CA8143844 |
1006 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372940483 CA8143845 |
1006 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8143843 rs377157126 |
1006 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs770851514 CA8143846 |
1007 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143847 rs201350190 |
1007 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs201350190 CA8143848 |
1007 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 1008 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs952696206 CA283478449 |
1008 | M>L | No |
ClinGen TOPMed |
|
|
CA283478454 rs984432808 |
1008 | M>R | No |
ClinGen TOPMed |
|
|
CA8143849 rs764209553 |
1009 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1391048819 CA396575632 |
1009 | M>T | No |
ClinGen gnomAD |
|
|
CA8143851 rs761976898 |
1012 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA396575689 rs1567716186 |
1013 | A>T | No |
ClinGen Ensembl |
|
|
CA8143855 rs750666249 |
1013 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA396575711 rs756466817 |
1014 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143856 rs756466817 |
1014 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs191210378 CA8143859 |
1015 | H>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs191210378 CA8143857 |
1015 | H>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| rs754711319 | 1015 | H>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8143858 rs191210378 |
1015 | H>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 1016 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8143861 rs375450811 |
1016 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1022 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1271042407 CA396575842 |
1023 | G>A | No |
ClinGen gnomAD |
|
|
rs200822475 CA8143862 |
1026 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA gnomAD |
|
CA8143863 rs777223721 |
1028 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143866 rs746722160 |
1031 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs528230423 CA8143868 |
1032 | L>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs759511820 CA8143869 |
1034 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769571864 CA8143870 |
1035 | K>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1036 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1467048243 CA396576010 |
1036 | E>K | No |
ClinGen gnomAD |
|
|
CA8143872 rs370955883 |
1037 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143873 rs767706204 |
1038 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA8143874 rs546675701 |
1040 | K>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs760937597 CA8143875 |
1041 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA8143876 rs766699549 |
1045 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374126654 CA8143878 |
1046 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143882 rs777395767 |
1051 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA8143881 rs757838629 |
1051 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs573387682 CA8143903 |
1052 | G>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA396576250 rs1265179111 |
1052 | G>R | No |
ClinGen TOPMed |
|
|
CA396576263 rs1173153403 |
1053 | L>F | No |
ClinGen gnomAD |
|
|
rs1416364371 CA396576271 |
1053 | L>R | No |
ClinGen gnomAD |
|
|
rs372307722 CA283478757 |
1056 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143906 rs779949834 |
1058 | I>S | No |
ClinGen ExAC gnomAD |
|
|
CA8143908 rs768599884 |
1059 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA8143909 rs768599884 |
1059 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs749149292 CA8143907 |
1059 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA8143910 rs747031435 |
1060 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA8143911 rs771003295 |
1061 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143912 rs771003295 |
1061 | V>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759856940 CA8143913 |
1064 | D>E | No |
ClinGen ExAC |
|
|
rs1342360812 CA396576474 |
1067 | G>D | No |
ClinGen gnomAD |
|
|
rs1383630149 CA396576550 |
1073 | L>P | No |
ClinGen gnomAD |
|
|
CA8143917 rs371908996 CA396576553 |
1074 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8143920 rs559026788 |
1076 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8143919 rs201547486 |
1076 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs750022807 CA8143921 |
1078 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs755830985 CA8143922 |
1079 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA8143924 rs372649965 |
1081 | C>W | No |
ClinGen ESP ExAC gnomAD |
|
|
CA8143927 rs748150107 |
1083 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8143926 rs180673806 |
1083 | F>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA283478947 rs964651122 |
1084 | P>A | No |
ClinGen gnomAD |
|
|
CA8143929 rs753730529 |
1084 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs964651122 CA396576645 |
1084 | P>S | No |
ClinGen gnomAD |
|
|
rs770015143 CA8143931 |
1085 | P>G | No |
ClinGen ExAC gnomAD |
1 associated diseases with Q8N0W3
[MIM: 618324]: Congenital disorder of glycosylation with defective fucosylation 2 (CDGF2)
A form of congenital disorder of glycosylation, a genetically heterogeneous group of multisystem disorders caused by a defect in glycoprotein biosynthesis and characterized by under-glycosylated serum glycoproteins. Congenital disorders of glycosylation result in a wide variety of clinical features, such as defects in the nervous system development, psychomotor retardation, dysmorphic features, hypotonia, coagulation disorders, and immunodeficiency. CDGF2 is an autosomal recessive disorder, apparent from birth, characterized by hypotonia, poor feeding, severely impaired intellectual and psychomotor development, seizures with epileptic encephalopathy, visual impairment and other ocular features, respiratory difficulty with frequent infections, as well as contractures. Brain imaging shows cerebellar and brainstem atrophy, hypoplasia or agenesis of the corpus callosum, and white matter abnormalities including periventricular leukomalacia. {ECO:0000269|PubMed:30503518}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A form of congenital disorder of glycosylation, a genetically heterogeneous group of multisystem disorders caused by a defect in glycoprotein biosynthesis and characterized by under-glycosylated serum glycoproteins. Congenital disorders of glycosylation result in a wide variety of clinical features, such as defects in the nervous system development, psychomotor retardation, dysmorphic features, hypotonia, coagulation disorders, and immunodeficiency. CDGF2 is an autosomal recessive disorder, apparent from birth, characterized by hypotonia, poor feeding, severely impaired intellectual and psychomotor development, seizures with epileptic encephalopathy, visual impairment and other ocular features, respiratory difficulty with frequent infections, as well as contractures. Brain imaging shows cerebellar and brainstem atrophy, hypoplasia or agenesis of the corpus callosum, and white matter abnormalities including periventricular leukomalacia. {ECO:0000269|PubMed:30503518}. Note=The disease is caused by variants affecting the gene represented in this entry.
Functions
| Description | ||
|---|---|---|
| EC Number | 2.7.1.52 | Phosphotransferases with an alcohol group as acceptor |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| fucokinase activity | Catalysis of the reaction: L-fucose + ATP = beta-L-fucose 1-phosphate + ADP + 2 H(+). |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| carbohydrate phosphorylation | The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y. |
| GDP-L-fucose salvage | The formation of GDP-L-fucose from L-fucose, without de novo synthesis. L-fucose is phosphorylated by fucokinase and then converted by fucose-1-phosphate guanylyltransferase (EC:2.7.7.30). |
| response to dopamine | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dopamine stimulus. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9LNJ9 | FKGP | Bifunctional fucokinase/fucose pyrophosphorylase | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEQPKGVDWT | VIILTCQYKD | SVQVFQRELE | VRQKREQIPA | GTLLLAVEDP | EKRVGSGGAT |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LNALLVAAEH | LSARAGFTVV | TSDVLHSAWI | LILHMGRDFP | FDDCGRAFTC | LPVENPEAPV |
| 130 | 140 | 150 | 160 | 170 | 180 |
| EALVCNLDCL | LDIMTYRLGP | GSPPGVWVCS | TDMLLSVPAN | PGISWDSFRG | ARVIALPGSP |
| 190 | 200 | 210 | 220 | 230 | 240 |
| AYAQNHGVYL | TDPQGLVLDI | YYQGTEAEIQ | RCVRPDGRVP | LVSGVVFFSV | ETAERLLATH |
| 250 | 260 | 270 | 280 | 290 | 300 |
| VSPPLDACTY | LGLDSGARPV | QLSLFFDILH | CMAENVTRED | FLVGRPPELG | QGDADVAGYL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| QSARAQLWRE | LRDQPLTMAY | VSSGSYSYMT | SSASEFLLSL | TLPGAPGAQI | VHSQVEEQQL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| LAAGSSVVSC | LLEGPVQLGP | GSVLQHCHLQ | GPIHIGAGCL | VTGLDTAHSK | ALHGRELRDL |
| 430 | 440 | 450 | 460 | 470 | 480 |
| VLQGHHTRLH | GSPGHAFTLV | GRLDSWERQG | AGTYLNVPWS | EFFKRTGVRA | WDLWDPETLP |
| 490 | 500 | 510 | 520 | 530 | 540 |
| AEYCLPSARL | FPVLHPSREL | GPQDLLWMLD | HQEDGGEALR | AWRASWRLSW | EQLQPCLDRA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| ATLASRRDLF | FRQALHKARH | VLEARQDLSL | RPLIWAAVRE | GCPGPLLATL | DQVAAGAGDP |
| 610 | 620 | 630 | 640 | 650 | 660 |
| GVAARALACV | ADVLGCMAEG | RGGLRSGPAA | NPEWMRPFSY | LECGDLAAGV | EALAQERDKW |
| 670 | 680 | 690 | 700 | 710 | 720 |
| LSRPALLVRA | ARHYEGAGQI | LIRQAVMSAQ | HFVSTEQVEL | PGPGQWVVAE | CPARVDFSGG |
| 730 | 740 | 750 | 760 | 770 | 780 |
| WSDTPPLAYE | LGGAVLGLAV | RVDGRRPIGA | RARRIPEPEL | WLAVGPRQDE | MTVKIVCRCL |
| 790 | 800 | 810 | 820 | 830 | 840 |
| ADLRDYCQPH | APGALLKAAF | ICAGIVHVHS | ELQLSEQLLR | TFGGGFELHT | WSELPHGSGL |
| 850 | 860 | 870 | 880 | 890 | 900 |
| GTSSILAGTA | LAALQRAAGR | VVGTEALIHA | VLHLEQVLTT | GGGWQDQVGG | LMPGIKVGRS |
| 910 | 920 | 930 | 940 | 950 | 960 |
| RAQLPLKVEV | EEVTVPEGFV | QKLNDHLLLV | YTGKTRLARN | LLQDVLRSWY | ARLPAVVQNA |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| HSLVRQTEEC | AEGFRQGSLP | LLGQCLTSYW | EQKKLMAPGC | EPLTVRRMMD | VLAPHVHGQS |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| LAGAGGGGFL | YLLTKEPQQK | EALEAVLAKT | EGLGNYSIHL | VEVDTQGLSL | KLLGTEASTC |
| CPFP |