Q8IWZ8
Gene name |
SUGP1 (SF4) |
Protein name |
SURP and G-patch domain-containing protein 1 |
Names |
RNA-binding protein RBP, Splicing factor 4 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:57794 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
4 structures for Q8IWZ8
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 8EJM | X-ray | 180 A | B | 543-614 | PDB |
| 8GXL | X-ray | 240 A | A/B | 433-577 | PDB |
| 8GXM | X-ray | 281 A | A/B | 433-586 | PDB |
| AF-Q8IWZ8-F1 | Predicted | AlphaFoldDB |
536 variants for Q8IWZ8
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs781016448 CA9325732 |
2 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA9325731 rs757155060 |
4 | K>Q | No |
ClinGen ExAC |
|
|
CA9325728 rs755030919 |
5 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1266077087 CA404933948 |
5 | M>T | No |
ClinGen gnomAD |
|
|
CA9325729 rs139043355 |
5 | M>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA404933940 rs1312547838 |
6 | D>G | Variant assessed as Somatic; 9.255e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1320129744 CA404933944 |
6 | D>N | No |
ClinGen gnomAD |
|
|
rs753871140 CA9325727 |
7 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA306326734 rs753871140 |
7 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1296839116 CA404933935 |
7 | N>S | No |
ClinGen gnomAD |
|
|
rs753871140 CA404933936 |
7 | N>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs761025042 CA9325725 |
8 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9325723 rs768057590 |
8 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA9325724 rs768057590 |
8 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs761025042 CA404933930 |
8 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371791944 CA9325721 |
9 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371791944 CA404933925 |
9 | D>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9325722 rs762394886 |
9 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA404933921 rs1170881341 |
10 | V>I | No |
ClinGen gnomAD |
|
|
rs762483181 CA9325719 |
11 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs199639572 CA9325718 |
11 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1199294539 CA404933869 |
15 | N>S | No |
ClinGen gnomAD |
|
|
CA9325684 rs545260401 |
16 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs143256524 CA9325685 |
16 | R>W | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1267647855 CA404933859 |
17 | W>* | No |
ClinGen TOPMed |
|
|
rs1434073323 CA404933853 |
18 | F>L | No |
ClinGen TOPMed |
|
|
CA404933827 rs746625391 |
22 | P>A | No |
ClinGen gnomAD |
|
|
CA404933826 rs746625391 |
22 | P>S | No |
ClinGen gnomAD |
|
|
rs746625391 CA306323178 |
22 | P>T | No |
ClinGen gnomAD |
|
|
rs1419693204 CA404933819 |
23 | P>L | No |
ClinGen TOPMed |
|
|
rs977443236 CA306323174 |
23 | P>T | No |
ClinGen Ensembl |
|
|
CA404933806 rs1159307724 |
25 | S>F | No |
ClinGen TOPMed |
|
|
CA404933796 rs1362582999 |
27 | K>E | No |
ClinGen TOPMed |
|
|
CA9325682 rs753203045 |
28 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs765749539 CA9325681 |
30 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758981874 CA9325680 |
31 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA404933756 rs1159334788 |
32 | I>F | No |
ClinGen gnomAD |
|
|
rs772875008 CA306323139 |
32 | I>N | No |
ClinGen Ensembl |
|
|
CA404933729 rs1568638215 |
36 | E>K | No |
ClinGen Ensembl |
|
|
CA306323083 rs139366608 |
39 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA306323060 rs199730578 |
40 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199730578 CA9325677 |
40 | A>T | Variant assessed as Somatic; 4.62e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 41 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404933693 rs1473231211 |
41 | Q>R | No |
ClinGen gnomAD |
|
|
CA404933685 rs1239639475 |
42 | K>R | No |
ClinGen gnomAD |
|
|
CA404933678 rs1185862083 |
43 | K>T | No |
ClinGen gnomAD |
|
|
CA404933671 rs992125911 |
44 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs992125911 CA306323040 |
44 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs773051132 CA9325676 |
44 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200530435 CA306323034 |
45 | E>G | No |
ClinGen 1000Genomes |
|
|
rs771817670 CA9325675 |
46 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA404933645 rs1284644586 |
48 | A>G | No |
ClinGen gnomAD |
|
|
CA404933649 rs1486997637 |
48 | A>T | No |
ClinGen gnomAD |
|
|
rs1284644586 CA404933644 |
48 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA306323023 rs201453017 |
50 | M>I | No |
ClinGen 1000Genomes |
|
|
CA404933618 rs1228575528 |
52 | Q>E | No |
ClinGen gnomAD |
|
|
CA9325674 COSM1391807 rs747985857 |
52 | Q>R | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1282284271 CA404933606 |
53 | K>N | No |
ClinGen gnomAD |
|
|
CA404933601 rs1341071216 |
54 | A>G | No |
ClinGen gnomAD |
|
|
rs774087554 CA9325673 |
54 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA306322985 rs958958803 |
58 | Q>H | No |
ClinGen TOPMed |
|
|
rs150894145 CA9325672 |
59 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1568638129 CA404933549 |
62 | P>T | No |
ClinGen Ensembl |
|
|
CA9325671 rs745893529 |
64 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs796157071 COSM565287 CA306322973 |
65 | P>S | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs1347845799 CA404933525 |
66 | H>D | No |
ClinGen gnomAD |
|
|
rs1317709277 CA404933519 |
66 | H>Q | No |
ClinGen gnomAD |
|
|
CA404933517 rs1406240682 |
67 | P>T | No |
ClinGen gnomAD |
|
| TCGA novel | 68 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1303474200 CA404933511 |
68 | G>S | No |
ClinGen gnomAD |
|
|
rs141578579 CA9325668 |
69 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9325650 rs139031618 |
72 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9325649 rs200879181 |
77 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA306317043 rs201242587 |
77 | S>P | No |
ClinGen 1000Genomes |
|
|
rs199887237 CA9325648 |
79 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs199887237 CA404933423 |
79 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs965708437 CA306317034 |
86 | D>V | No |
ClinGen Ensembl |
|
|
rs1385013043 CA404933306 |
95 | K>R | No |
ClinGen TOPMed |
|
|
rs779302963 CA9325644 |
97 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA9325643 rs755469277 |
99 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs754396458 CA9325642 |
100 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs780550393 CA9325641 |
102 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA9325640 rs755509135 |
102 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA404933258 rs1273127969 |
102 | S>T | No |
ClinGen gnomAD |
|
|
CA9325638 rs567819859 |
103 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs567819859 CA9325639 |
103 | T>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
COSM1391805 rs1288215925 CA404933231 |
105 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs765038141 CA9325615 |
106 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1230331051 CA404933219 |
107 | T>A | No |
ClinGen gnomAD |
|
|
CA306312455 rs1040617727 |
108 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA9325612 rs558513662 |
109 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1003347536 CA306312379 |
110 | P>L | No |
ClinGen TOPMed |
|
|
rs1452682461 CA404933200 |
110 | P>S | No |
ClinGen gnomAD |
|
|
rs990314561 CA306312354 |
112 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs150385928 CA306312345 |
113 | P>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs150385928 CA9325609 |
113 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA306312333 rs371886791 |
114 | P>S | No |
ClinGen ESP |
|
|
CA404933175 rs1194356616 |
115 | S>R | No |
ClinGen gnomAD |
|
|
CA306312325 rs749604015 |
117 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749604015 CA9325608 |
117 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1265506044 CA404933152 |
118 | T>I | No |
ClinGen gnomAD |
|
|
rs1265506044 CA404933154 |
118 | T>N | No |
ClinGen gnomAD |
|
|
rs770169929 CA404933150 |
119 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404933148 rs1599865797 |
119 | P>R | No |
ClinGen Ensembl |
|
|
rs770169929 CA9325606 |
119 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9325604 rs369935862 |
121 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA404933131 rs1219842709 |
122 | G>W | No |
ClinGen gnomAD |
|
|
rs1280253261 CA404933112 |
125 | S>T | No |
ClinGen TOPMed |
|
|
CA9325601 rs777529014 |
131 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746524142 CA9325602 |
131 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1599865736 CA404933069 |
132 | T>A | No |
ClinGen Ensembl |
|
|
rs758150595 CA9325600 |
133 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1310417911 CA404933057 |
134 | L>Q | No |
ClinGen gnomAD |
|
|
CA404933045 rs1191103434 |
136 | L>Q | No |
ClinGen TOPMed |
|
|
rs1467182969 CA404933039 |
137 | A>G | No |
ClinGen gnomAD |
|
|
CA404933030 rs1329519670 |
138 | S>R | No |
ClinGen Ensembl |
|
|
CA9325597 rs146447054 |
140 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9325594 rs761839165 |
141 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA9325592 rs764278070 |
142 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA306312203 rs200094872 |
147 | S>C | No |
ClinGen 1000Genomes gnomAD |
|
|
rs775713772 CA404932968 |
148 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404932964 rs1250077640 |
149 | A>S | No |
ClinGen gnomAD |
|
|
CA404932961 rs1226101823 |
149 | A>V | No |
ClinGen gnomAD |
|
|
rs1331224160 CA404932956 |
150 | K>R | No |
ClinGen gnomAD |
|
|
rs1389159836 CA404932951 |
151 | Q>E | No |
ClinGen TOPMed |
|
|
CA404932934 rs1568632329 |
153 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1599865622 CA404932929 |
154 | V>G | No |
ClinGen Ensembl |
|
|
CA9325588 rs553015469 |
154 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200740823 CA9325587 |
155 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9325584 rs777477846 |
156 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA9325583 rs531964821 |
157 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9325582 rs376950672 |
157 | R>H | Variant assessed as Somatic; 0.0001395 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs376950672 CA404932914 |
157 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9325580 rs766788551 |
158 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779990752 CA9325578 |
159 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1222381018 CA404932884 |
162 | Q>* | No |
ClinGen TOPMed |
|
|
rs1599865570 CA404932883 |
162 | Q>P | No |
ClinGen Ensembl |
|
|
rs1179685803 CA404932873 |
163 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA404932871 rs756091098 |
164 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756091098 CA9325577 |
164 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404932853 rs1413005612 |
166 | E>D | No |
ClinGen TOPMed |
|
|
CA9325574 rs763148041 |
168 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA404932831 rs1231355575 |
169 | E>V | No |
ClinGen gnomAD |
|
|
rs765383429 CA9325572 |
171 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs943619299 CA306312028 |
172 | Y>C | No |
ClinGen gnomAD |
|
|
CA9325569 rs776884463 |
173 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA9325570 rs759906189 |
173 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA9325567 rs761307333 |
177 | E>G | No |
ClinGen ExAC |
|
|
CA9325566 rs772847394 |
178 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs1599865501 CA404932765 |
179 | K>Q | No |
ClinGen Ensembl |
|
|
CA9325565 rs149077181 |
179 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9325564 rs747612934 |
180 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404932741 rs1456544120 |
180 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
CA404932734 rs1435988714 |
182 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA404932725 rs1172672425 |
183 | P>Q | No |
ClinGen gnomAD |
|
|
rs1599863629 CA404932718 |
184 | E>G | No |
ClinGen Ensembl |
|
|
rs773103956 CA9325471 |
187 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9325470 rs371293274 |
187 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs773103956 CA404932699 |
187 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404932701 rs1175197843 |
187 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs775710080 CA9325468 |
189 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs367575240 CA9325469 |
189 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs891610880 CA306309919 |
190 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA9325467 rs769929058 |
191 | V>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404932678 rs1210511780 |
191 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA9325466 rs745959391 |
192 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 195 | L>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781222533 CA9325465 |
197 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs1373279840 CA404932636 |
197 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1002713428 CA306309889 |
200 | A>T | No |
ClinGen Ensembl |
|
|
rs771215202 CA9325464 |
201 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA306309885 rs905905668 |
201 | E>K | No |
ClinGen TOPMed |
|
|
rs1417130444 CA404932609 |
202 | G>R | No |
ClinGen gnomAD |
|
|
CA404932594 rs1311738853 |
204 | P>R | No |
ClinGen gnomAD |
|
|
CA404932597 rs1373146617 |
204 | P>S | No |
ClinGen gnomAD |
|
|
rs150375001 CA9325462 |
205 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1599863531 CA404932584 |
206 | L>V | No |
ClinGen Ensembl |
|
|
CA9325460 rs753267233 |
207 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA9325459 rs779394884 |
208 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1040063846 CA306309837 |
208 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA404932569 rs1190038239 |
208 | K>T | No |
ClinGen gnomAD |
|
|
CA404932564 rs1255583240 |
209 | V>L | No |
ClinGen gnomAD |
|
|
rs1487983327 CA404932548 |
211 | M>I | No |
ClinGen gnomAD |
|
|
CA404932550 rs944320360 |
211 | M>R | No |
ClinGen TOPMed gnomAD |
|
|
CA306309836 rs944320360 |
211 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1187232115 CA404932552 |
211 | M>V | No |
ClinGen gnomAD |
|
|
CA9325458 rs754423277 |
215 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA306309828 rs202057659 |
217 | N>K | No |
ClinGen Ensembl |
|
|
CA404932491 rs1316739303 |
219 | A>T | No |
ClinGen gnomAD |
|
|
rs753405908 CA9325457 |
219 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA9325455 rs199690877 |
221 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 223 | L>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1568630582 CA404932450 |
223 | L>F | No |
ClinGen Ensembl |
|
|
CA404932454 rs1252737365 |
223 | L>V | No |
ClinGen gnomAD |
|
|
CA404932435 rs1481902986 |
225 | D>G | No |
ClinGen gnomAD |
|
|
CA404932428 rs181184094 |
226 | K>M | No |
ClinGen 1000Genomes gnomAD |
|
| TCGA novel | 226 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs181184094 CA306309532 |
226 | K>R | No |
ClinGen 1000Genomes gnomAD |
|
| TCGA novel | 226 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs374307015 CA306309526 |
228 | S>N | No |
ClinGen ESP |
|
|
rs914332860 CA306309521 |
230 | E>K | No |
ClinGen Ensembl |
|
|
CA404932386 rs1348182456 |
232 | L>F | No |
ClinGen gnomAD |
|
|
rs772299597 CA9325422 |
233 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1305122894 CA404932380 |
233 | Y>D | No |
ClinGen gnomAD |
|
|
CA306309475 rs201089916 |
234 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA9325421 rs748468708 |
234 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA9325419 rs769033669 |
236 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1568630521 CA404932358 |
236 | K>R | No |
ClinGen Ensembl |
|
|
CA9325418 rs749876599 |
237 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1285483889 CA404932344 |
238 | V>A | No |
ClinGen TOPMed |
|
|
rs1354521283 CA404932342 |
239 | A>T | No |
ClinGen TOPMed |
|
|
rs1461507420 CA404932332 |
240 | E>G | No |
ClinGen gnomAD |
|
|
rs780432892 CA404932324 |
241 | I>K | No |
ClinGen ExAC gnomAD |
|
|
rs755593835 CA9325416 |
241 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs780432892 CA9325417 |
241 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1269227155 CA404932327 |
241 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 242 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9325415 rs745392386 |
243 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404932305 rs1421413507 |
244 | E>G | No |
ClinGen gnomAD |
|
|
rs1182900635 CA404932309 |
244 | E>K | No |
ClinGen gnomAD |
|
|
CA404932296 rs1248975414 |
245 | A>V | No |
ClinGen gnomAD |
|
|
rs1978144 CA9325414 |
248 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA306309394 rs980750977 |
249 | Q>L | No |
ClinGen TOPMed |
|
|
rs764037415 CA9325411 |
250 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA9325409 rs564501602 |
253 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9325408 rs765097277 |
254 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA404932222 rs1166042569 |
255 | V>D | No |
ClinGen TOPMed |
|
|
CA306309355 rs981380888 |
255 | V>F | No |
ClinGen gnomAD |
|
|
CA404932207 rs1271153601 |
258 | P>A | No |
ClinGen gnomAD |
|
|
rs139824492 CA9325375 |
260 | D>A | No |
ClinGen ESP ExAC gnomAD |
|
|
rs199857058 CA9325376 |
260 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs139824492 CA306308552 |
260 | D>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs747940911 CA9325373 |
261 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 262 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1429649516 CA404932158 |
265 | N>D | No |
ClinGen gnomAD |
|
|
rs560561021 CA9325371 |
267 | A>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9325370 rs369915490 |
268 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA404932127 rs1568629737 COSM148536 |
269 | K>N | stomach [Cosmic] | No |
ClinGen cosmic curated Ensembl |
| TCGA novel | 272 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs757279695 CA9325367 |
272 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs1355321302 CA404932109 |
272 | R>T | No |
ClinGen TOPMed |
|
|
CA404932098 rs1474228799 |
274 | I>L | No |
ClinGen TOPMed gnomAD |
|
|
CA404932097 rs1474228799 |
274 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs751672219 COSM1225426 CA9325366 |
275 | A>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs148548104 CA9325362 |
277 | G>E | No |
ClinGen ESP ExAC gnomAD |
|
|
COSM1391804 rs753091052 CA9325363 |
277 | G>R | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs975494489 CA306308451 |
278 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
rs759982073 CA9325361 |
278 | G>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 278 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404932062 rs1236555768 |
280 | E>A | No |
ClinGen TOPMed |
|
|
CA404932058 rs1235265799 |
280 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA9325358 rs760219553 |
280 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs76081408 CA306308398 |
281 | V>G | No |
ClinGen Ensembl |
|
|
CA404932042 rs1373717950 |
283 | T>S | No |
ClinGen gnomAD |
|
|
CA404932038 rs1324297973 |
284 | I>V | No |
ClinGen gnomAD |
|
|
CA9325357 rs772633982 |
286 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA404932014 rs1355564208 |
287 | Q>H | No |
ClinGen gnomAD |
|
|
rs1182846518 CA404932000 |
289 | N>S | No |
ClinGen TOPMed |
|
|
rs144812014 CA9325356 |
290 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
VAR_051339 rs17751061 CA9325355 |
290 | R>H | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs17751061 CA306308356 |
290 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA404931982 rs1286973356 |
292 | N>T | No |
ClinGen gnomAD |
|
| TCGA novel | 293 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404931967 rs1369371802 |
294 | A>S | No |
ClinGen gnomAD |
|
|
rs768384274 CA9325354 |
295 | F>I | No |
ClinGen ExAC gnomAD |
|
|
CA9325353 rs768384274 |
295 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1332115418 CA404931925 |
298 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA404931920 rs1238644335 |
299 | Y>C | No |
ClinGen TOPMed |
|
|
rs1334159235 CA404931924 |
299 | Y>N | No |
ClinGen TOPMed |
|
|
CA9325325 rs781194243 |
302 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA9325324 rs758349812 |
303 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404931882 rs1406571787 |
304 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA9325323 rs571747108 |
305 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA404931872 rs1416040840 |
306 | Y>C | No |
ClinGen gnomAD |
|
|
rs1490493862 CA404931866 |
307 | K>E | No |
ClinGen TOPMed |
|
|
rs779234612 CA9325322 |
307 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA9325321 rs755288420 |
308 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1001432531 CA306304615 |
310 | R>* | No |
ClinGen TOPMed |
|
|
rs552434494 CA9325319 |
310 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs552434494 COSM1225427 CA9325318 |
310 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA404931841 rs1456652583 |
311 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
CA404931842 rs1456652583 |
311 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
rs761192202 CA9325314 |
314 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA306304580 rs907129000 |
315 | E>K | No |
ClinGen TOPMed |
|
|
rs1254145923 CA404931808 |
316 | F>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1181557592 CA404931802 |
316 | F>L | No |
ClinGen gnomAD |
|
|
CA9325312 rs763715807 |
317 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9325313 rs751111684 |
317 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1394472700 CA404931796 |
318 | K>E | No |
ClinGen TOPMed |
|
|
CA404931787 rs1235202386 |
319 | A>T | No |
ClinGen gnomAD |
|
|
CA404931756 rs1207157485 |
323 | S>F | No |
ClinGen gnomAD |
|
|
rs144902507 CA306304560 |
324 | T>I | No |
ClinGen 1000Genomes gnomAD |
|
|
rs141056245 CA9325310 |
325 | G>V | No |
ClinGen ESP |
|
|
CA9325309 rs569955081 |
327 | F>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA306304528 rs267605375 |
327 | F>L | No |
ClinGen Ensembl |
|
|
CA404931726 rs1599858116 |
328 | T>I | No |
ClinGen Ensembl |
|
|
rs1235653179 CA404931717 |
330 | P>S | No |
ClinGen gnomAD |
|
|
CA306304523 rs892895144 |
331 | D>E | No |
ClinGen Ensembl |
|
|
CA9325308 rs549763712 |
332 | P>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs147240341 CA9325305 |
333 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs147240341 CA9325306 |
333 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs907097249 CA306304498 |
333 | G>V | No |
ClinGen Ensembl |
|
|
rs1450104461 CA404931694 |
334 | L>P | No |
ClinGen TOPMed |
|
|
CA404931689 rs1314127316 |
335 | K>R | No |
ClinGen TOPMed |
|
|
rs749011248 CA306304484 |
336 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9325304 rs749011248 |
336 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs143809642 CA9325302 |
336 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9325303 rs143809642 |
336 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA404931677 rs1434034239 |
337 | K>N | No |
ClinGen gnomAD |
|
|
CA9325301 rs749458200 |
338 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749458200 CA9325300 |
338 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756388171 CA9325298 |
339 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138311992 CA9325299 |
339 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 341 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1182083974 CA404931661 |
341 | E>K | No |
ClinGen TOPMed |
|
|
rs540622118 CA9325295 |
345 | G>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9325297 CA9325296 rs781521404 |
345 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA9325294 rs368177566 |
346 | S>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9325293 rs191697530 |
347 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA9325292 rs762453182 |
348 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404931622 rs762453182 |
348 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762453182 CA404931621 |
348 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759210238 CA9325289 |
350 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs759210238 CA404931611 |
350 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs776526668 CA9325288 |
351 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs774565208 CA9325285 |
352 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA9325286 rs760720706 |
352 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA404931594 rs1294999217 |
353 | C>Y | No |
ClinGen gnomAD |
|
|
CA404931587 rs1461605095 |
354 | P>S | No |
ClinGen TOPMed |
|
|
rs749403249 CA404931582 |
355 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9325283 COSM1225429 rs749403249 |
355 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs371163303 CA9325282 |
356 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9325280 rs746196563 |
358 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs564624631 CA9325278 |
359 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9325277 rs747450618 |
360 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404931550 rs1449082090 |
361 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs752234954 CA404931527 |
364 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs1431968334 CA404931512 |
367 | P>S | No |
ClinGen gnomAD |
|
|
CA404931507 rs1262886873 |
368 | A>P | No |
ClinGen TOPMed |
|
|
rs865923116 CA306304331 |
369 | A>S | No |
ClinGen Ensembl |
|
|
CA9325272 rs376087890 |
369 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA404931494 rs1184108411 |
370 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA9325271 rs373152885 |
370 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9325267 rs767598998 |
371 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs773238000 CA9325268 |
371 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs773238000 CA9325269 |
371 | G>W | No |
ClinGen ExAC gnomAD |
|
|
rs763097381 CA9325266 |
374 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA9325265 rs775688929 |
375 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs200062643 CA404931465 |
376 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200062643 CA9325263 |
376 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 377 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404931451 rs1568626535 |
378 | T>S | No |
ClinGen Ensembl |
|
|
CA9325261 rs747395123 |
379 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9325260 rs747395123 |
379 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9325259 rs778212982 |
380 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1376238173 CA404931432 |
381 | R>S | No |
ClinGen gnomAD |
|
|
rs998515034 CA306304268 |
383 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA9325258 rs758942961 |
383 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404931414 rs778539130 COSM1304226 CA404931413 |
384 | K>N | Variant assessed as Somatic; impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs754579542 CA9325255 |
385 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs143568455 CA306304255 |
385 | S>N | No |
ClinGen ESP TOPMed |
|
|
rs1180756895 CA404931403 COSM340497 |
386 | R>L | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1180756895 CA404931405 |
386 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA306304249 rs866478381 |
386 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1198344499 CA404931382 |
389 | P>L | No |
ClinGen gnomAD |
|
|
rs1289822512 CA404931364 |
392 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA9325251 rs750287204 |
393 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1599857784 CA404931345 |
394 | V>G | No |
ClinGen Ensembl |
|
|
rs1489895826 CA404931338 |
395 | E>D | No |
ClinGen TOPMed |
|
|
rs761900209 CA9325249 |
397 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA9325247 rs765296196 |
401 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA404931304 rs775427869 |
401 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767527075 CA9325245 |
403 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771173241 CA9325244 |
404 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA404931280 rs1394494957 COSM1480820 |
405 | D>Y | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1049880786 CA404931273 |
406 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1049880786 CA306304210 |
406 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA9325242 rs773612129 |
407 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs1013287126 CA306304199 |
408 | A>P | No |
ClinGen Ensembl |
|
|
CA404931258 rs1157817011 |
408 | A>V | No |
ClinGen gnomAD |
|
|
CA9325241 rs772549956 |
409 | S>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA404931253 rs772549956 |
409 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA404931249 rs1185040619 |
410 | P>L | No |
ClinGen gnomAD |
|
|
rs1441412079 CA404931241 |
411 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA404931245 rs1372375128 |
411 | S>P | No |
ClinGen gnomAD |
|
|
rs1206621706 CA404931236 |
412 | P>H | No |
ClinGen gnomAD |
|
|
CA404931235 rs1206621706 |
412 | P>L | No |
ClinGen gnomAD |
|
|
CA404931240 rs1300023551 |
412 | P>T | No |
ClinGen TOPMed |
|
|
CA9325237 rs748782198 |
414 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9325209 rs758315037 |
418 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs766116629 CA9325206 |
422 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767760322 CA9325204 |
423 | Y>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 424 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404930425 rs1568617790 |
427 | K>E | No |
ClinGen Ensembl |
|
|
CA9325202 rs774631996 |
427 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1057524594 CA404930418 |
428 | P>A | No |
ClinGen TOPMed |
|
|
RCV000422553 rs1057524594 CA16608983 |
428 | P>T | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
CA9325201 rs769196580 |
430 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9325200 rs763437677 |
432 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs776145667 CA9325199 |
433 | G>D | No |
ClinGen ExAC |
|
|
CA9325197 rs201991625 |
434 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1293982462 CA404930380 |
435 | T>K | No |
ClinGen gnomAD |
|
|
rs770527782 CA9325195 |
435 | T>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 439 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs752533161 CA306292186 |
440 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs752533161 CA306292189 |
440 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA404930342 rs1408171450 |
441 | Q>R | No |
ClinGen Ensembl |
|
|
CA9325192 rs758347969 |
442 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs892190941 CA306292173 |
443 | K>M | No |
ClinGen TOPMed |
|
|
rs1427437991 CA404930330 |
443 | K>Q | No |
ClinGen gnomAD |
|
|
CA404930327 rs892190941 |
443 | K>R | No |
ClinGen TOPMed |
|
|
CA404930293 rs1475461688 |
448 | Q>E | No |
ClinGen TOPMed |
|
|
rs774155517 CA306291585 |
454 | M>V | No |
ClinGen gnomAD |
|
|
CA404930223 rs1402819100 |
455 | Y>D | No |
ClinGen TOPMed gnomAD |
|
|
CA9325161 rs753151041 |
456 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs758652218 CA9325162 |
456 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1390534271 CA404930211 |
457 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1390534271 CA404930210 |
457 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1318522339 CA404930194 |
459 | M>V | No |
ClinGen gnomAD |
|
|
CA9325159 rs760178317 |
461 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA404930176 rs1456634075 |
461 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA404930162 rs1411847599 |
463 | R>Q | No |
ClinGen gnomAD |
|
|
COSM993317 rs765736375 CA9325157 |
463 | R>W | Variant assessed as Somatic; 4.951e-05 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA404930147 rs1181467043 |
465 | M>I | No |
ClinGen gnomAD |
|
|
rs199704654 CA9325156 |
466 | Q>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs772687437 CA9325155 |
467 | D>N | No |
ClinGen ExAC gnomAD |
|
|
COSM711014 rs1207468394 CA404930130 |
468 | M>L | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1223071035 CA404930098 |
472 | W>L | No |
ClinGen gnomAD |
|
|
CA9325154 rs771785261 |
473 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs144894916 CA306291563 |
474 | K>N | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs149904112 CA9325153 |
475 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9325152 rs774192281 |
479 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1185765744 CA404930045 |
480 | Q>E | No |
ClinGen TOPMed |
|
|
CA9325151 rs749160884 |
481 | H>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749160884 CA9325150 |
481 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs200366547 CA9325148 |
482 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA306291546 rs950565750 |
483 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA404930000 rs1348182098 |
486 | D>G | No |
ClinGen gnomAD |
|
|
rs1164420519 CA404929990 |
487 | E>D | No |
ClinGen gnomAD |
|
|
CA404929977 rs1568617106 |
489 | V>A | No |
ClinGen Ensembl |
|
|
CA404929975 rs1568617106 |
489 | V>G | No |
ClinGen Ensembl |
|
|
rs777828548 CA9325146 |
491 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758740995 CA9325145 |
491 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs777828548 CA404929966 |
491 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779486894 CA9325143 |
491 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150298383 CA9325142 |
492 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
| TCGA novel | 495 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404929839 rs1343841425 |
502 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
COSM993316 CA404929836 rs1272273296 |
502 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1331432714 CA404929794 |
505 | M>I | No |
ClinGen gnomAD |
|
|
CA404929798 rs1214274813 |
505 | M>T | No |
ClinGen TOPMed |
|
| TCGA novel | 510 | E>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1304949095 CA404929353 |
511 | W>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA404929334 rs1377529255 |
513 | E>K | No |
ClinGen gnomAD |
|
|
rs1160503522 CA404929319 |
514 | Q>E | No |
ClinGen gnomAD |
|
|
CA404929285 rs1459695823 |
517 | K>R | No |
ClinGen TOPMed |
|
|
CA404929277 rs1409053891 |
518 | M>V | No |
ClinGen gnomAD |
|
|
rs746198171 CA9325118 |
520 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 520 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs766950771 CA9325116 |
521 | G>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 526 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200762916 CA306291283 |
531 | P>L | No |
ClinGen gnomAD |
|
|
rs1286531378 CA404929135 |
531 | P>S | No |
ClinGen gnomAD |
|
|
rs372492652 CA404929120 |
532 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 533 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1019036177 CA306291275 |
538 | M>L | No |
ClinGen Ensembl |
|
| TCGA novel | 539 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404929031 rs1312881404 |
541 | F>L | No |
ClinGen TOPMed |
|
| TCGA novel | 542 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404929026 rs1322992365 |
542 | K>R | No |
ClinGen TOPMed |
|
|
rs1394686240 CA404929014 |
544 | L>P | No |
ClinGen gnomAD |
|
|
rs1331465159 CA404928988 |
546 | E>A | No |
ClinGen TOPMed |
|
|
rs751111630 CA9325095 |
548 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs552135971 CA306290961 |
548 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA gnomAD |
|
rs1019724930 CA306290957 |
551 | D>E | No |
ClinGen TOPMed |
|
|
CA404928952 rs1599842472 |
552 | Y>H | No |
ClinGen Ensembl |
|
|
CA306290954 rs987344615 |
553 | S>* | No |
ClinGen TOPMed |
|
|
rs145841833 CA306290947 |
559 | K>R | No |
ClinGen 1000Genomes gnomAD |
|
|
rs1332144920 CA404928884 |
561 | T>N | No |
ClinGen TOPMed |
|
|
CA306290923 rs200868748 |
562 | V>A | No |
ClinGen 1000Genomes |
|
|
rs201984049 CA306290919 |
564 | N>S | No |
ClinGen 1000Genomes |
|
|
rs763715738 CA9325093 |
565 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 566 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404928839 rs1340426570 |
568 | Q>* | No |
ClinGen gnomAD |
|
|
CA306290909 VAR_051340 rs1044980 |
568 | Q>H | No |
ClinGen UniProt Ensembl dbSNP |
|
|
rs752428280 CA9325091 |
569 | M>L | No |
ClinGen ExAC gnomAD |
|
|
TCGA novel CA9325090 rs775586104 |
571 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC gnomAD NCI-TCGA |
|
rs888285140 CA306290889 |
571 | M>T | No |
ClinGen Ensembl |
|
|
rs113605232 CA306290885 |
572 | K>E | No |
ClinGen Ensembl |
|
| TCGA novel | 572 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759259125 CA404928780 |
576 | K>M | No |
ClinGen ExAC gnomAD |
|
|
rs759259125 CA9325089 |
576 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA404928765 rs1404008594 |
578 | G>D | No |
ClinGen gnomAD |
|
| TCGA novel | 580 | G>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs766450315 CA9325087 |
583 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA404928728 rs1418458852 |
584 | E>G | No |
ClinGen gnomAD |
|
|
CA9325086 rs761951334 |
585 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA404928697 rs1248586816 |
589 | K>E | No |
ClinGen gnomAD |
|
|
rs777041381 CA9325060 |
595 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1399430986 CA404928549 |
598 | T>A | No |
ClinGen TOPMed |
|
|
rs1336011516 CA404928531 |
600 | D>N | No |
ClinGen gnomAD |
|
| TCGA novel | 601 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771420701 CA9325059 |
601 | G>S | No |
ClinGen ExAC gnomAD |
|
|
COSM3937951 CA9325058 rs747446537 |
602 | A>T | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA9325056 rs199748454 |
606 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs778596406 CA9325054 |
608 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404928434 rs747643478 |
608 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs754634640 CA404928419 |
609 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA9325053 rs754634640 |
609 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
CA306290466 rs896681510 |
610 | A>V | No |
ClinGen gnomAD |
|
|
CA404928402 rs1003049894 |
611 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA306290461 rs1003049894 |
611 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA404928336 rs1568615568 |
615 | E>D | No |
ClinGen Ensembl |
|
|
rs755987704 CA9325050 |
615 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA9325048 rs767385847 |
617 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752771723 CA9325046 |
618 | E>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 618 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs765486353 CA9325045 |
619 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA404928281 rs1599841618 |
619 | Y>D | No |
ClinGen Ensembl |
|
|
CA404928275 rs1243933383 |
620 | E>Q | No |
ClinGen TOPMed |
|
|
CA9325043 rs776841011 |
621 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1407291543 CA404928255 |
623 | R>C | No |
ClinGen gnomAD |
|
|
CA404928250 rs1383840199 |
623 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA404928249 rs1176708366 |
624 | K>Q | No |
ClinGen TOPMed |
|
| TCGA novel | 625 | R>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404928219 rs1250475249 |
627 | M>I | No |
ClinGen gnomAD |
|
|
CA404928213 rs1185234617 |
628 | L>P | No |
ClinGen gnomAD |
|
|
rs747671249 CA9325037 |
631 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9325036 rs778344320 |
631 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA404928183 rs1290819987 |
633 | R>Q | No |
ClinGen gnomAD |
|
|
CA404928179 rs1228912277 |
634 | P>A | No |
ClinGen gnomAD |
|
|
rs1293368368 CA404928170 |
635 | N>S | No |
ClinGen gnomAD |
|
|
CA404928164 rs1568615466 |
636 | P>A | No |
ClinGen Ensembl |
|
| TCGA novel | 637 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404928123 rs1360283108 |
640 | P>R | No |
ClinGen gnomAD |
|
|
rs182843197 CA9325009 |
644 | Y>S | No |
ClinGen 1000Genomes ExAC gnomAD |
No associated diseases with Q8IWZ8
3 regional properties for Q8IWZ8
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | SWAP/Surp | 189 - 243 | IPR000061-1 |
| domain | SWAP/Surp | 264 - 318 | IPR000061-2 |
| domain | G-patch domain | 560 - 609 | IPR000467 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| spliceosomal complex | Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| RNA binding | Binding to an RNA molecule or a portion thereof. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| mRNA processing | Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. |
| RNA splicing | The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q8CH02 | Sugp1 | SURP and G-patch domain-containing protein 1 | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSLKMDNRDV | AGKANRWFGV | APPKSGKMNM | NILHQEELIA | QKKREIEAKM | EQKAKQNQVA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SPQPPHPGEI | TNAHNSSCIS | NKFANDGSFL | QQFLKLQKAQ | TSTDAPTSAP | SAPPSTPTPS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| AGKRSLLISR | RTGLGLASLP | GPVKSYSHAK | QLPVAHRPSV | FQSPDEDEEE | DYEQWLEIKV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SPPEGAETRK | VIEKLARFVA | EGGPELEKVA | MEDYKDNPAF | AFLHDKNSRE | FLYYRKKVAE |
| 250 | 260 | 270 | 280 | 290 | 300 |
| IRKEAQKSQA | ASQKVSPPED | EEVKNLAEKL | ARFIADGGPE | VETIALQNNR | ENQAFSFLYE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| PNSQGYKYYR | QKLEEFRKAK | ASSTGSFTAP | DPGLKRKSPP | EALSGSLPPA | TTCPASSTPA |
| 370 | 380 | 390 | 400 | 410 | 420 |
| PTIIPAPAAP | GKPASAATVK | RKRKSRWGPE | EDKVELPPAE | LVQRDVDASP | SPLSVQDLKG |
| 430 | 440 | 450 | 460 | 470 | 480 |
| LGYEKGKPVG | LVGVTELSDA | QKKQLKEQQE | MQQMYDMIMQ | HKRAMQDMQL | LWEKAVQQHQ |
| 490 | 500 | 510 | 520 | 530 | 540 |
| HGYDSDEEVD | SELGTWEHQL | RRMEMDKTRE | WAEQLTKMGR | GKHFIGDFLP | PDELEKFMET |
| 550 | 560 | 570 | 580 | 590 | 600 |
| FKALKEGREP | DYSEYKEFKL | TVENIGYQML | MKMGWKEGEG | LGSEGQGIKN | PVNKGTTTVD |
| 610 | 620 | 630 | 640 | ||
| GAGFGIDRPA | ELSKEDDEYE | AFRKRMMLAY | RFRPNPLNNP | RRPYY |