Q8H2D1
Gene name |
REM8 (ARF24, At4g31680, F28M20.130) |
Protein name |
B3 domain-containing protein REM8 |
Names |
Auxin response factor 24, Protein REPRODUCTIVE MERISTEM 8 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT4G31680 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8H2D1
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8H2D1-F1 | Predicted | AlphaFoldDB |
60 variants for Q8H2D1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_4_15342067_G_A | 5 | S>L | No | 1000Genomes | |
| ENSVATH00547183 | 6 | Q>L | No | 1000Genomes | |
| ENSVATH06808745 | 20 | P>A | No | 1000Genomes | |
| tmp_4_15342010_C_T | 24 | R>K | No | 1000Genomes | |
| tmp_4_15341922_A_C | 27 | N>K | No | 1000Genomes | |
| ENSVATH00547182 | 44 | E>K | No | 1000Genomes | |
| tmp_4_15341867_C_A | 46 | V>L | No | 1000Genomes | |
| ENSVATH02948408 | 47 | K>Q | No | 1000Genomes | |
| ENSVATH00547181 | 50 | A>T | No | 1000Genomes | |
| ENSVATH12337880 | 54 | K>R | No | 1000Genomes | |
| ENSVATH12337879 | 62 | D>E | No | 1000Genomes | |
| ENSVATH12337877 | 64 | N>H | No | 1000Genomes | |
| ENSVATH02948407 | 82 | R>C | No | 1000Genomes | |
| ENSVATH14321622 | 93 | M>V | No | 1000Genomes | |
| ENSVATH02948406 | 100 | L>F | No | 1000Genomes | |
| tmp_4_15341680_T_C | 108 | Q>R | No | 1000Genomes | |
| ENSVATH02948405 | 111 | Q>L | No | 1000Genomes | |
| ENSVATH02948404 | 113 | I>S | No | 1000Genomes | |
| ENSVATH00547180 | 124 | V>I | No | 1000Genomes | |
| ENSVATH14321621 | 164 | T>I | No | 1000Genomes | |
| ENSVATH12337841 | 179 | M>V | No | 1000Genomes | |
| ENSVATH12337839 | 185 | M>L | No | 1000Genomes | |
| tmp_4_15341247_C_G | 190 | K>N | No | 1000Genomes | |
| ENSVATH12337837 | 190 | K>R | No | 1000Genomes | |
| tmp_4_15341181_A_T | 212 | S>R | No | 1000Genomes | |
| tmp_4_15341179_A_T | 213 | L>H | No | 1000Genomes | |
| ENSVATH06808741 | 218 | K>I | No | 1000Genomes | |
| ENSVATH02948396 | 221 | G>V | No | 1000Genomes | |
| tmp_4_15341140_G_A | 226 | T>I | No | 1000Genomes | |
| tmp_4_15341090_G_A | 243 | R>C | No | 1000Genomes | |
| ENSVATH12337835 | 248 | R>W | No | 1000Genomes | |
| tmp_4_15340954_G_A | 265 | H>Y | No | 1000Genomes | |
| tmp_4_15340950_A_C | 266 | L>R | No | 1000Genomes | |
| ENSVATH00547178 | 267 | P>A | No | 1000Genomes | |
| tmp_4_15340927_T_C | 274 | N>D | No | 1000Genomes | |
| tmp_4_15340878_A_G | 290 | V>A | No | 1000Genomes | |
| ENSVATH02948391 | 305 | H>Y | No | 1000Genomes | |
| ENSVATH06808737 | 312 | W>S | No | 1000Genomes | |
| tmp_4_15340785_A_T | 321 | V>E | No | 1000Genomes | |
| ENSVATH02948390 | 323 | A>G | No | 1000Genomes | |
| tmp_4_15340780_C_T | 323 | A>T | No | 1000Genomes | |
| tmp_4_15340755_A_G | 331 | L>S | No | 1000Genomes | |
| ENSVATH02948389 | 345 | K>M | No | 1000Genomes | |
| tmp_4_15340634_T_A | 348 | Q>H | No | 1000Genomes | |
| tmp_4_15340633_G_A | 349 | P>S | No | 1000Genomes | |
| ENSVATH02948386 | 351 | F>L | No | 1000Genomes | |
| ENSVATH06808736 | 351 | F>S | No | 1000Genomes | |
| ENSVATH02948384 | 381 | M>V | No | 1000Genomes | |
| tmp_4_15340531_G_A | 383 | P>S | No | 1000Genomes | |
| ENSVATH02948383 | 384 | E>K | No | 1000Genomes | |
| ENSVATH02948382 | 387 | K>I | No | 1000Genomes | |
| ENSVATH06808735 | 404 | S>F | No | 1000Genomes | |
| ENSVATH12337773 | 407 | K>N | No | 1000Genomes | |
| tmp_4_15340419_G_C | 420 | T>R | No | 1000Genomes | |
| ENSVATH02948381 | 422 | H>Q | No | 1000Genomes | |
| ENSVATH02948380 | 435 | T>I | No | 1000Genomes | |
| ENSVATH12337772 | 443 | E>G | No | 1000Genomes | |
| ENSVATH06808734 | 459 | N>D | No | 1000Genomes | |
| tmp_4_15340296_A_C | 461 | L>* | No | 1000Genomes | |
| tmp_4_15340294_T_A | 462 | S>C | No | 1000Genomes |
No associated diseases with Q8H2D1
3 regional properties for Q8H2D1
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | B3 DNA binding domain | 11 - 103 | IPR003340-1 |
| domain | B3 DNA binding domain | 148 - 244 | IPR003340-2 |
| domain | B3 DNA binding domain | 248 - 346 | IPR003340-3 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
5 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q5N6V0 | Os01g0905400 | B3 domain-containing protein Os01g0905400 | Oryza sativa subsp japonica (Rice) | PR |
| Q7XS75 | Os04g0346900 | Putative B3 domain-containing protein Os04g0346900 | Oryza sativa subsp japonica (Rice) | PR |
| Q7XS74 | Os04g0347400 | Putative B3 domain-containing protein Os04g0347400 | Oryza sativa subsp japonica (Rice) | PR |
| Q9XIB4 | At1g49475 | B3 domain-containing protein At1g49475 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q84J39 | REM1 | B3 domain-containing protein REM1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MANASQLSPT | NKHFFKPLLP | GFQRNLNIPV | KFFSEHIEGK | HEGETVKLRA | DASKRTWEVK |
| 70 | 80 | 90 | 100 | 110 | 120 |
| MDGNRLTEGW | KEFVEAHDLR | IRDFVVFRHE | GDMVFHVTAL | GPSCCEIQYP | QSISHEEGEE |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SGEVEISERE | VEENLQKEYD | QSSADLNCFS | QSVTHSNISN | DLVTLPRDFA | KRNGLDKGMH |
| 190 | 200 | 210 | 220 | 230 | 240 |
| EIVLMNEEGK | SWESEVRSRM | SGQVFIVGGW | KSLCSENKLK | GGDSCTFKLL | QNAKTPVFQL |
| 250 | 260 | 270 | 280 | 290 | 300 |
| CSRIGESRFV | KLTPTLNSLE | IGKQHLPVSF | TKGNGLIHPG | EIILVDKDRV | EWSMKLQVDN |
| 310 | 320 | 330 | 340 | 350 | 360 |
| RGGMHIFGGN | DWKSFCAANE | VGAGESLTLE | LIRGGLSPLF | KFFSKIEQPS | FEAEDRRHKR |
| 370 | 380 | 390 | 400 | 410 | 420 |
| ARVHNGSQET | DKGEPSRATK | MGPELEKREK | TAEKGEPSRA | SNKSSGKQGN | LQKTQACSVT |
| 430 | 440 | 450 | 460 | ||
| DHVAKVKESV | VDTLTSIRRF | QAELETMEQK | LEDSLQEINK | LS |